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Dey KK, Deshmukh MM, Ghosh M. A Description of the Local Structure and Dynamics of Ketoconazole Molecule by Solid‐State NMR Measurements and DFT Calculations: Proposition for NMR Crystallography. ChemistrySelect 2021. [DOI: 10.1002/slct.202102622] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Krishna Kishor Dey
- Department of Physics Dr. Harisingh Gour Central University Sagar 470003, Madhya-Pradesh India
| | - Milind M. Deshmukh
- Department of Chemistry Dr. Harisingh Gour Central University Sagar 470003, Madhya-Pradesh India
| | - Manasi Ghosh
- Physics Section MMV Banaras Hindu University Varanasi 221005, Uttar-Pradesh India
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2
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Juneau M, Liu R, Peng Y, Malge A, Ma Z, Porosoff MD. Characterization of Metal‐zeolite Composite Catalysts: Determining the Environment of the Active Phase. ChemCatChem 2020. [DOI: 10.1002/cctc.201902039] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Mitchell Juneau
- Department of Chemical EngineeringUniversity of Rochester Rochester NY-14627 USA
| | - Renjie Liu
- Department of Chemical EngineeringUniversity of Rochester Rochester NY-14627 USA
| | - Yikang Peng
- Department of Chemical EngineeringUniversity of Rochester Rochester NY-14627 USA
| | - Akhilesh Malge
- Department of Chemical EngineeringUniversity of Rochester Rochester NY-14627 USA
| | - Zhiqiang Ma
- Department of Chemical EngineeringUniversity of Rochester Rochester NY-14627 USA
| | - Marc D. Porosoff
- Department of Chemical EngineeringUniversity of Rochester Rochester NY-14627 USA
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Mitova V, Shestakova P, Koseva N, Troev K. Phosphorus and Silicon Containing Inorganic Polymer Poly(dimethylsilane H‐phosphonate): Synthesis and NMR Spectroscopic Characterization. Eur J Inorg Chem 2019. [DOI: 10.1002/ejic.201801359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Violeta Mitova
- Institute of Polymers Bulgarian Academy of Sciences Akad. G. Bonchev St., Bl 103‐A 1113 Sofia Bulgaria
| | - Pavletta Shestakova
- NMR Centre, Institute of Organic Chemistry with Centre of Phytochemistry Bulgarian Academy of Sciences Acad. G. Bontchev str. Bl. 9 1113 Sofia Bulgaria
| | - Neli Koseva
- Institute of Polymers Bulgarian Academy of Sciences Akad. G. Bonchev St., Bl 103‐A 1113 Sofia Bulgaria
| | - Kolio Troev
- Institute of Polymers Bulgarian Academy of Sciences Akad. G. Bonchev St., Bl 103‐A 1113 Sofia Bulgaria
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Marchione D, Izquierdo MA, Bistoni G, Havenith RWA, Macchioni A, Zuccaccia D, Tarantelli F, Belpassi L. 13
C NMR Spectroscopy of N-Heterocyclic Carbenes Can Selectively Probe σ Donation in Gold(I) Complexes. Chemistry 2017; 23:2722-2728. [DOI: 10.1002/chem.201605502] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2016] [Indexed: 01/05/2023]
Affiliation(s)
- Demian Marchione
- Science Division; Jet Propulsion Laboratory; California Institute of Technology; Pasadena CA 91109 USA
| | - Maria A. Izquierdo
- Theoretical Chemistry, Zernike Institute for Advanced Materials; University of Groningen; The Netherlands
- Software for Chemistry and Materials; Theoretical Chemistry; Vrije University; De Boelelaan 1083 1081 HV Amsterdam The Netherlands
| | - Giovanni Bistoni
- Max Planck Institute for Chemical Energy Conversion; Stiftstr. 34-36 45470 Mülheim an der Ruhr Germany
| | - Remco W. A. Havenith
- Theoretical Chemistry, Zernike Institute for Advanced Materials; University of Groningen; The Netherlands
- Stratingh Institute for Chemistry; University of Groningen; Nijenborgh 4 9747 AG Groningen The Netherlands
- Department of Inorganic and Physical Chemistry; University of Ghent; Krijgslaan 281 (S3) 9000 Gent Belgium
| | - Alceo Macchioni
- Dipartimento di Chimica, Biologia e Biotecnologie; Università di Perugia; Italy
| | - Daniele Zuccaccia
- Dipartimento di Scienze Agroalimentari, Ambientali e Animali; Sezione di Chimica; Università di Udine; Italy
| | - Francesco Tarantelli
- Dipartimento di Chimica, Biologia e Biotecnologie; Università di Perugia; Italy
- Istituto di Scienze e Tecnologie Molecolari del CNR (CNR-ISTM); Via Elce di Sotto 8 06123 Perugia Italy
| | - Leonardo Belpassi
- Istituto di Scienze e Tecnologie Molecolari del CNR (CNR-ISTM); Via Elce di Sotto 8 06123 Perugia Italy
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Li X, Tapmeyer L, Bolte M, van de Streek J. Crystallographic and Dynamic Aspects of Solid-State NMR Calibration Compounds: Towards ab Initio NMR Crystallography. Chemphyschem 2016; 17:2496-502. [PMID: 27276509 PMCID: PMC5096255 DOI: 10.1002/cphc.201600398] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2016] [Indexed: 11/06/2022]
Abstract
The excellent results of dispersion-corrected density functional theory (DFT-D) calculations for static systems have been well established over the past decade. The introduction of dynamics into DFT-D calculations is a target, especially for the field of molecular NMR crystallography. Four (13) C ss-NMR calibration compounds are investigated by single-crystal X-ray diffraction, molecular dynamics and DFT-D calculations. The crystal structure of 3-methylglutaric acid is reported. The rotator phases of adamantane and hexamethylbenzene at room temperature are successfully reproduced in the molecular dynamics simulations. The calculated (13) C chemical shifts of these compounds are in excellent agreement with experiment, with a root-mean-square deviation of 2.0 ppm. It is confirmed that a combination of classical molecular dynamics and DFT-D chemical shift calculation improves the accuracy of calculated chemical shifts.
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Affiliation(s)
- Xiaozhou Li
- Department of Pharmacy, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark
| | - Lukas Tapmeyer
- Institute for Inorganic and Analytical Chemistry, Goethe University, Max-von-Laue-Strasse 7, D-60438, Frankfurt am Main, Germany
| | - Michael Bolte
- Institute for Inorganic and Analytical Chemistry, Goethe University, Max-von-Laue-Strasse 7, D-60438, Frankfurt am Main, Germany
| | - Jacco van de Streek
- Department of Pharmacy, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark.
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Pöppler AC, Demers JP, Malon M, Singh AP, Roesky HW, Nishiyama Y, Lange A. Ultrafast Magic-Angle Spinning: Benefits for the Acquisition of Ultrawide-Line NMR Spectra of Heavy Spin-1/2 Nuclei. Chemphyschem 2016; 17:812-6. [DOI: 10.1002/cphc.201501136] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2015] [Indexed: 11/11/2022]
Affiliation(s)
- Ann-Christin Pöppler
- Department for NMR-based Structural Biology; Max Planck Institute for Biophysical Chemistry; Am Fassberg 11 37077 Göttingen Germany
- Department of Molecular Biophysics; Leibniz-Institut für Molekulare Pharmakologie (FMP); 13125 Berlin Germany
- Institut für Biologie; Humboldt-Universität zu Berlin; 10115 Berlin Germany
| | - Jean-Philippe Demers
- Department for NMR-based Structural Biology; Max Planck Institute for Biophysical Chemistry; Am Fassberg 11 37077 Göttingen Germany
- Department of Molecular Biophysics; Leibniz-Institut für Molekulare Pharmakologie (FMP); 13125 Berlin Germany
- Institut für Biologie; Humboldt-Universität zu Berlin; 10115 Berlin Germany
| | - Michal Malon
- JEOL RESONANCE Inc.; 3-1-2 Musashino Akishima Tokyo 196-8558 Japan
- RIKEN CLST-JEOL Collaboration Center, Suehiro-cho, Tsurumi; Yokohama Kanagawa 230-0045 Japan
| | - Amit Pratap Singh
- Institut für Anorganische Chemie; Universität Göttingen; Tammannstrasse 4 37077 Göttingen Germany
| | - Herbert W. Roesky
- Institut für Anorganische Chemie; Universität Göttingen; Tammannstrasse 4 37077 Göttingen Germany
| | - Yusuke Nishiyama
- JEOL RESONANCE Inc.; 3-1-2 Musashino Akishima Tokyo 196-8558 Japan
- RIKEN CLST-JEOL Collaboration Center, Suehiro-cho, Tsurumi; Yokohama Kanagawa 230-0045 Japan
| | - Adam Lange
- Department for NMR-based Structural Biology; Max Planck Institute for Biophysical Chemistry; Am Fassberg 11 37077 Göttingen Germany
- Department of Molecular Biophysics; Leibniz-Institut für Molekulare Pharmakologie (FMP); 13125 Berlin Germany
- Institut für Biologie; Humboldt-Universität zu Berlin; 10115 Berlin Germany
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Baigorri R, Urrutia O, Erro J, Mandado M, Pérez-Juste I, Garcia-Mina JM. Structural characterization of anion-calcium-humate complexes in phosphate-based fertilizers. CHEMSUSCHEM 2013; 6:1245-1251. [PMID: 23670945 DOI: 10.1002/cssc.201300024] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2013] [Indexed: 06/02/2023]
Abstract
Fertilizers based on phosphate-metal-humate complexes are a new family of compounds that represents a more sustainable and bioavailable phosphorus source. The characterization of this type of complex by using solid (31)P NMR in several fertilizers, based on single superphosphate (SSP) and triple superphosphate (TSP) matrices, yielded surprising and unexpected trends in the intensity and fine structure of the (31)P NMR peaks. Computational chemistry methods allowed the characterization of phosphate-calcium-humate complexes in both SSP and TSP matrices, but also predicted the formation of a stable sulfate-calcium-humate complex in the SSP fertilizers, which has not been described previously. The stability of this complex has been confirmed by using ultrafiltration techniques. Preference towards the humic substance for the sulfate-metal phase in SSP allowed the explanation of the opposing trends that were observed in the experimental (31)P NMR spectra of SSP and TSP samples. Additionally, computational chemistry has provided an assignment of the (31)P NMR signals to different phosphate ligands as well as valuable information about the relative strength of the phosphate-calcium interactions within the crystals.
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Affiliation(s)
- Roberto Baigorri
- R&D Department, Timac Agro International, Polígono Arazuri-Orkoien, Orkoien, Navarra, Spain.
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Takahashi H, Lee D, Dubois L, Bardet M, Hediger S, De Paëpe G. Rapid Natural-Abundance 2D13C-13C Correlation Spectroscopy Using Dynamic Nuclear Polarization Enhanced Solid-State NMR and Matrix-Free Sample Preparation. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201206102] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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9
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Takahashi H, Lee D, Dubois L, Bardet M, Hediger S, De Paëpe G. Rapid natural-abundance 2D 13C-13C correlation spectroscopy using dynamic nuclear polarization enhanced solid-state NMR and matrix-free sample preparation. Angew Chem Int Ed Engl 2012; 51:11766-9. [PMID: 23081784 DOI: 10.1002/anie.201206102] [Citation(s) in RCA: 139] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2012] [Indexed: 11/11/2022]
Affiliation(s)
- Hiroki Takahashi
- Laboratoire de Chimie Inorganique et Biologique, UMR-E3 CEA/UJF & CNRS, Institut Nanosciences et Cryogénie (CEA/DSM), 38054 Grenoble, France
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Holland DJ, Bostock MJ, Gladden LF, Nietlispach D. Fast multidimensional NMR spectroscopy using compressed sensing. Angew Chem Int Ed Engl 2011; 50:6548-51. [PMID: 21648028 DOI: 10.1002/anie.201100440] [Citation(s) in RCA: 209] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2011] [Revised: 04/26/2011] [Indexed: 11/12/2022]
Affiliation(s)
- Daniel J Holland
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge, CB2 3RA, UK
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11
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Holland DJ, Bostock MJ, Gladden LF, Nietlispach D. Fast Multidimensional NMR Spectroscopy Using Compressed Sensing. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201100440] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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12
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Tietze D, Voigt S, Mollenhauer D, Tischler M, Imhof D, Gutmann T, González L, Ohlenschläger O, Breitzke H, Görlach M, Buntkowsky G. Revealing the Position of the Substrate in Nickel Superoxide Dismutase: A Model Study. Angew Chem Int Ed Engl 2011; 50:2946-50. [DOI: 10.1002/anie.201005027] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2010] [Revised: 11/16/2010] [Indexed: 01/26/2023]
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Tietze D, Voigt S, Mollenhauer D, Tischler M, Imhof D, Gutmann T, González L, Ohlenschläger O, Breitzke H, Görlach M, Buntkowsky G. Bestimmung der Substratposition in der Nickel-Superoxiddismutase: eine Modellstudie. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201005027] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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15
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Seyfarth L, Sehnert J, El-Gamel N, Milius W, Kroke E, Breu J, Senker J. Structure elucidation of cyameluric acid by combining solid-state NMR spectroscopy, molecular modeling and direct-space methods. J Mol Struct 2008. [DOI: 10.1016/j.molstruc.2008.02.005] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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