1
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Wojaczyńska E, Steppeler F, Iwan D, Scherrmann MC, Marra A. Synthesis and Applications of Carbohydrate-Based Organocatalysts. Molecules 2021; 26:7291. [PMID: 34885873 PMCID: PMC8659088 DOI: 10.3390/molecules26237291] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 11/22/2021] [Accepted: 11/24/2021] [Indexed: 12/22/2022] Open
Abstract
Organocatalysis is a very useful tool for the asymmetric synthesis of biologically or pharmacologically active compounds because it avoids the use of noxious metals, which are difficult to eliminate from the target products. Moreover, in many cases, the organocatalysed reactions can be performed in benign solvents and do not require anhydrous conditions. It is well-known that most of the above-mentioned reactions are promoted by a simple aminoacid, l-proline, or, to a lesser extent, by the more complex cinchona alkaloids. However, during the past three decades, other enantiopure natural compounds, the carbohydrates, have been employed as organocatalysts. In the present exhaustive review, the detailed preparation of all the sugar-based organocatalysts as well as their catalytic properties are described.
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Affiliation(s)
- Elżbieta Wojaczyńska
- Faculty of Chemistry, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50 370 Wrocław, Poland
| | - Franz Steppeler
- Faculty of Chemistry, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50 370 Wrocław, Poland
| | - Dominika Iwan
- Faculty of Chemistry, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50 370 Wrocław, Poland
| | - Marie-Christine Scherrmann
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), Université Paris-Saclay, Bâtiment 420, 91405 Orsay, France
| | - Alberto Marra
- Institut des Biomolécules Max Mousseron (IBMM-UMR 5247), Université de Montpellier, Pôle Chimie Balard Recherche, 1919 Route de Mende, 34293 Montpellier, France
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2
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Robert‐Scott G, St‐Gelais J, Giguère D. Annulative Dimerization of Carbohydrates: Synthesis of Complex
C
2
‐Symmetrical 1,4‐Dioxane‐Sugar Hybrids. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100411] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Gabrielle Robert‐Scott
- Département de Chimie Université Laval 1045 av. De la Médecine Québec City, Qc G1V 0A6 Canada
| | - Jacob St‐Gelais
- Département de Chimie Université Laval 1045 av. De la Médecine Québec City, Qc G1V 0A6 Canada
| | - Denis Giguère
- Département de Chimie Université Laval 1045 av. De la Médecine Québec City, Qc G1V 0A6 Canada
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3
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Manmode S, Tanabe S, Yamamoto T, Sasaki N, Nokami T, Itoh T. Electrochemical Glycosylation as an Enabling Tool for the Stereoselective Synthesis of Cyclic Oligosaccharides. ChemistryOpen 2019; 8:869-872. [PMID: 31309034 PMCID: PMC6607414 DOI: 10.1002/open.201900185] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Indexed: 11/08/2022] Open
Abstract
Electrochemical glycosylation of a linear oligosaccharide with a protecting-group-free primary hydroxyl group afforded cyclic oligo-saccharides, up to hexasaccharides, in high yields. Precursors of the cyclic oligosaccharides were prepared by automated electro-chemical assembly-a method for the automated electrochemical solution-phase synthesis of oligosaccharides. We demonstrated that electrochemical glycosylation is useful not only for intermolecular glycosylation but also for intramolecular glycosylation to synthesize cyclic oligosaccharides.
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Affiliation(s)
- Sujit Manmode
- Department of Chemistry and Biotechnology, Graduate School of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan E-mai
| | - Shichidai Tanabe
- Department of Chemistry and Biotechnology, Graduate School of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan E-mai
| | - Takashi Yamamoto
- Department of Chemistry and Biotechnology, Graduate School of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan E-mai
| | - Norihiko Sasaki
- Department of Chemistry and Biotechnology, Graduate School of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan E-mai
| | - Toshiki Nokami
- Department of Chemistry and Biotechnology, Graduate School of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan E-mai.,Center for Research on Green Sustainable Chemistry, Faculty of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan
| | - Toshiyuki Itoh
- Department of Chemistry and Biotechnology, Graduate School of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan E-mai.,Center for Research on Green Sustainable Chemistry, Faculty of Engineering Tottori University 4-101 Koyamachominami Tottori city 680-8552 Tottori Japan
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4
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Murakata M, Kawase A, Kimura N, Ikeda T, Nagase M, Koizumi M, Kuwata K, Maeda K, Shimizu H. Synthesis of Tofogliflozin as an SGLT2 Inhibitor via Construction of Dihydroisobenzofuran by Intramolecular [4 + 2] Cycloaddition. Org Process Res Dev 2019. [DOI: 10.1021/acs.oprd.8b00400] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Masatoshi Murakata
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Akira Kawase
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Nobuaki Kimura
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Takuma Ikeda
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Masahiro Nagase
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Masatoshi Koizumi
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Kazuaki Kuwata
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Kenji Maeda
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
| | - Hitoshi Shimizu
- API Process Development Department, Chugai Pharmaceutical Co., Ltd., 5-5-1 Ukima, Kita-Ku, Tokyo 115-8543, Japan
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5
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Bertolotti B, Oroszová B, Sutkeviciute I, Kniežo L, Fieschi F, Parkan K, Lovyová Z, Kašáková M, Moravcová J. Nonhydrolyzable C-disaccharides, a new class of DC-SIGN ligands. Carbohydr Res 2016; 435:7-18. [DOI: 10.1016/j.carres.2016.09.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2016] [Revised: 09/05/2016] [Accepted: 09/06/2016] [Indexed: 01/01/2023]
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6
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Hossain MS, Polat Cakir S, Altınbaş Özpınar G, Nadeem S, Demir AS. Synthesis of (3,6-dihydro-2H-pyran-2-yl)phosphonate derivatives and investigation of catalyst effect on frontier molecular orbitals using DFT method. PHOSPHORUS SULFUR 2016. [DOI: 10.1080/10426507.2016.1166502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
| | - Sidika Polat Cakir
- Department of Chemical Engineering, Faculty of Engineering, Canakkale Onsekiz Mart University, Canakkale, Turkey
| | - Gül Altınbaş Özpınar
- Department of Chemical Engineering, Faculty of Engineering, Canakkale Onsekiz Mart University, Canakkale, Turkey
| | - Said Nadeem
- Department of Chemistry, Middle East Technical University, Ankara, Turkey
| | - Ayhan S. Demir
- Department of Chemistry, Middle East Technical University, Ankara, Turkey
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Abstract
The first total synthesis of norlignan glucoside sinenside A has been accomplished. An intramolecular acetalization reaction has been employed as the key skeletal construct to forge the central cyclic disaccharide core. The trans-1,2-diol configuration present in the cyclic disaccharide of this natural product is unique and has been addressed by setting this configuration at the beginning. A 1,2-orthoester group has been selected as a handle for both sp glycosidation and for differentiation of the C2'-OH (that participates in the key acetalization reaction) of the sugar unit.
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Affiliation(s)
- Paresh M Vadhadiya
- Division of Organic Chemistry, CSIR-National Chemical Laboratory, Dr. HomiBhabha Road, Pune 411008, India
| | - Chepuri V Ramana
- Division of Organic Chemistry, CSIR-National Chemical Laboratory, Dr. HomiBhabha Road, Pune 411008, India
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8
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Boultadakis-Arapinis M, Prost E, Gandon V, Lemoine P, Turcaud S, Micouin L, Lecourt T. Carbene-Mediated Functionalization of the Anomeric CH Bond of Carbohydrates: Scope and Limitations. Chemistry 2013; 19:6052-66. [DOI: 10.1002/chem.201203725] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2012] [Indexed: 11/06/2022]
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9
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Boultadakis-Arapinis M, Lescot C, Micouin L, Lecourt T. Rh(II) Carbene-Mediated Synthesis of Methyl α- and β-Ketopyranosides: Preparation of Carbene Precursors, Quaternarization of the Anomeric Position, and Ring Opening of γ-Lactones. J Carbohydr Chem 2011. [DOI: 10.1080/07328303.2011.614983] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Affiliation(s)
- Mélissa Boultadakis-Arapinis
- a Laboratoire de Chimie Thérapeutique (UMR CNRS 8638) , Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques , 4, avenue de l’Observatoire, 75006, Paris , France
| | - Camille Lescot
- a Laboratoire de Chimie Thérapeutique (UMR CNRS 8638) , Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques , 4, avenue de l’Observatoire, 75006, Paris , France
| | - Laurent Micouin
- a Laboratoire de Chimie Thérapeutique (UMR CNRS 8638) , Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques , 4, avenue de l’Observatoire, 75006, Paris , France
| | - Thomas Lecourt
- a Laboratoire de Chimie Thérapeutique (UMR CNRS 8638) , Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques , 4, avenue de l’Observatoire, 75006, Paris , France
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10
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Polat-Cakir S, Demir AS. Hetero Diels–Alder reactions of acyl phosphonates: synthesis of glycosyl type phosphonates. Tetrahedron 2011. [DOI: 10.1016/j.tet.2011.02.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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11
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Dondoni A, Marra A. Calixarene and calixresorcarene glycosides: their synthesis and biological applications. Chem Rev 2010; 110:4949-77. [PMID: 20496911 DOI: 10.1021/cr100027b] [Citation(s) in RCA: 197] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Alessandro Dondoni
- Dipartimento di Chimica, Laboratorio di Chimica Organica, Universita di Ferrara, Via L. Borsari 46, 44100 Ferrara, Italy.
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12
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Boultadakis-Arapinis M, Lemoine P, Turcaud S, Micouin L, Lecourt T. Rh(II) Carbene-Promoted Activation of the Anomeric C−H Bond of Carbohydrates: A Stereospecific Entry toward α- and β-Ketopyranosides. J Am Chem Soc 2010; 132:15477-9. [DOI: 10.1021/ja1054065] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mélissa Boultadakis-Arapinis
- Laboratoire de Chimie Thérapeutique (UMR CNRS 8638), and Laboratoire de Cristallographie et RMN Biologique (UMR CNRS 8015), Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques, 4, avenue de l’Observatoire, 75006 Paris, France
| | - Pascale Lemoine
- Laboratoire de Chimie Thérapeutique (UMR CNRS 8638), and Laboratoire de Cristallographie et RMN Biologique (UMR CNRS 8015), Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques, 4, avenue de l’Observatoire, 75006 Paris, France
| | - Serge Turcaud
- Laboratoire de Chimie Thérapeutique (UMR CNRS 8638), and Laboratoire de Cristallographie et RMN Biologique (UMR CNRS 8015), Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques, 4, avenue de l’Observatoire, 75006 Paris, France
| | - Laurent Micouin
- Laboratoire de Chimie Thérapeutique (UMR CNRS 8638), and Laboratoire de Cristallographie et RMN Biologique (UMR CNRS 8015), Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques, 4, avenue de l’Observatoire, 75006 Paris, France
| | - Thomas Lecourt
- Laboratoire de Chimie Thérapeutique (UMR CNRS 8638), and Laboratoire de Cristallographie et RMN Biologique (UMR CNRS 8015), Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques, 4, avenue de l’Observatoire, 75006 Paris, France
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13
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Synthesis of Hybrid Peptidomimetics and Neoglycoconjugates Employing Click Protocol: Dual Utility of Poc-Group for Inserting Carbamate-Triazole Units into Peptide Backbone. Int J Pept Res Ther 2010. [DOI: 10.1007/s10989-010-9228-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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14
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Carrozzini B, Cascarano GL, Giacovazzo C. The cross-correlation function: main properties and first applications. J Appl Crystallogr 2010. [DOI: 10.1107/s0021889809049346] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
When a model structure, and more generally a model electron density ρM(r), is available, its cross-correlation functionC(u) with the unknown true structure ρ(r) cannot be exactly calculated. A useful approximation ofC(u) is obtained by replacing exp[i(φh − φMh)] by its expected value. In this caseC′(u), a potentially useful approximation of the functionC(u), is obtained. In this paper the main crystallographic properties of the functionsC(u) andC′(u) are established. It is also shown that such functions may be useful for the success of the phasing process.
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15
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Parkan K, Werner L, Lövyová Z, Prchalová E, Kniežo L. An approach to stereoselective preparation of 3-C-glycosylated d- and l-glucals. Carbohydr Res 2010; 345:352-62. [DOI: 10.1016/j.carres.2009.11.025] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2009] [Accepted: 11/18/2009] [Indexed: 10/20/2022]
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16
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Van der Jeught S, Stevens CV. Direct phosphonylation of aromatic azaheterocycles. Chem Rev 2009; 109:2672-702. [PMID: 19449857 DOI: 10.1021/cr800315j] [Citation(s) in RCA: 250] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sarah Van der Jeught
- Department of Organic Chemistry, Faculty of Bioscience Engineering, Gent University, Coupure Links 653, B-9000 Gent, Belgium.
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17
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Dondoni A, Marra A. Transformation of linear oligoketosides into macrocyclic neoglycoconjugates. Tetrahedron Lett 2009. [DOI: 10.1016/j.tetlet.2009.03.056] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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18
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19
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García-Moreno MI, Benito JM, Mellet CO, Fernández JMG. Chemical and enzymatic approaches to carbohydrate-derived spiroketals: di-D-fructose dianhydrides (DFAs). Molecules 2008; 13:1640-70. [PMID: 18794777 PMCID: PMC6245366 DOI: 10.3390/molecules13071640] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2008] [Revised: 07/22/2008] [Accepted: 07/28/2008] [Indexed: 11/16/2022] Open
Abstract
Di-D-fructose dianhydrides (DFAs) comprise a unique family of stereoisomeric spiro-tricyclic disaccharides formed upon thermal and/or acidic activation of sucrose- and/ or D-fructose-rich materials. The recent discovery of the presence of DFAs in food products and their remarkable nutritional features has attracted considerable interest from the food industry. DFAs behave as low-caloric sweeteners and have proven to exert beneficial prebiotic nutritional functions, favouring the growth of Bifidobacterium spp. In the era of functional foods, investigation of the beneficial properties of DFAs has become an important issue. However, the complexity of the DFA mixtures formed during caramelization or roasting of carbohydrates by traditional procedures (up to 14 diastereomeric spiroketal cores) makes evaluation of their individual properties a difficult challenge. Great effort has gone into the development of efficient procedures to obtain DFAs in pure form at laboratory and industrial scale. This paper is devoted to review the recent advances in the stereoselective synthesis of DFAs by means of chemical and enzymatic approaches, their scope, limitations, and complementarities.
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Affiliation(s)
- M. Isabel García-Moreno
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain; E-mail:
| | - Juan M. Benito
- Instituto de Investigaciones Químicas, CSIC – Universidad de Sevilla, Américo Vespucio 49, Isla de la Cartuja, 41092 Sevilla, Spain; E-mail:
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain; E-mail:
| | - José M. García Fernández
- Instituto de Investigaciones Químicas, CSIC – Universidad de Sevilla, Américo Vespucio 49, Isla de la Cartuja, 41092 Sevilla, Spain; E-mail:
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20
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García-Moreno MI, Benito JM, Mellet CO, Fernández JMG. Chemical and enzymatic approaches to carbohydrate-derived spiroketals: di-D-fructose dianhydrides (DFAs). Molecules 2008. [PMID: 18794777 PMCID: PMC6245366 DOI: 10.3390/molecules13081640] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
Abstract
Di-D-fructose dianhydrides (DFAs) comprise a unique family of stereoisomeric spiro-tricyclic disaccharides formed upon thermal and/or acidic activation of sucrose- and/ or D-fructose-rich materials. The recent discovery of the presence of DFAs in food products and their remarkable nutritional features has attracted considerable interest from the food industry. DFAs behave as low-caloric sweeteners and have proven to exert beneficial prebiotic nutritional functions, favouring the growth of Bifidobacterium spp. In the era of functional foods, investigation of the beneficial properties of DFAs has become an important issue. However, the complexity of the DFA mixtures formed during caramelization or roasting of carbohydrates by traditional procedures (up to 14 diastereomeric spiroketal cores) makes evaluation of their individual properties a difficult challenge. Great effort has gone into the development of efficient procedures to obtain DFAs in pure form at laboratory and industrial scale. This paper is devoted to review the recent advances in the stereoselective synthesis of DFAs by means of chemical and enzymatic approaches, their scope, limitations, and complementarities.
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Affiliation(s)
- M. Isabel García-Moreno
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain; E-mail:
- Author to whom correspondence should be addressed; E-Mails: ;
| | - Juan M. Benito
- Instituto de Investigaciones Químicas, CSIC – Universidad de Sevilla, Américo Vespucio 49, Isla de la Cartuja, 41092 Sevilla, Spain; E-mail:
- Author to whom correspondence should be addressed; E-Mails: ;
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain; E-mail:
| | - José M. García Fernández
- Instituto de Investigaciones Químicas, CSIC – Universidad de Sevilla, Américo Vespucio 49, Isla de la Cartuja, 41092 Sevilla, Spain; E-mail:
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Harvey DJ. Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update covering the period 2001-2002. MASS SPECTROMETRY REVIEWS 2008; 27:125-201. [PMID: 18247413 DOI: 10.1002/mas.20157] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
This review is the second update of the original review on the application of MALDI mass spectrometry to the analysis of carbohydrates and glycoconjugates that was published in 1999. It covers fundamental aspects of the technique as applied to carbohydrates, fragmentation of carbohydrates, studies of specific carbohydrate types such as those from plant cell walls and those attached to proteins and lipids, studies of glycosyl-transferases and glycosidases, and studies where MALDI has been used to monitor products of chemical synthesis. Use of the technique shows a steady annual increase at the expense of older techniques such as FAB. There is an increasing emphasis on its use for examination of biological systems rather than on studies of fundamental aspects and method development and this is reflected by much of the work on applications appearing in tabular form.
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Affiliation(s)
- David J Harvey
- Department of Biochemistry, Oxford Glycobiology Institute, South Parks Road, Oxford OX1 3QU, UK.
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22
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Balbuena P, Rubio EM, Ortiz Mellet C, García Fernández JM. The o-xylylene protecting group as an element of conformational control of remote stereochemistry in the synthesis of spiroketals. Chem Commun (Camb) 2006:2610-2. [PMID: 16779494 DOI: 10.1039/b604718a] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Protection of trans-1,2-diol segments as cyclic o-xylylene ethers strongly favours diequatorial over diaxial dispositions; the possibility of using this grouping for remote control of the stereochemistry in the synthesis of spiroketals is here demonstrated by the stereoselective synthesis of tricyclic spirodisaccharides (di-D-fructose dianhydrides).
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Affiliation(s)
- Patricia Balbuena
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Apartado 553, E-41071, Sevilla, Spain
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23
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Cluzeau J, Lubell WD. Design, synthesis, and application of azabicyclo[X.Y.0]alkanone amino acids as constrained dipeptide surrogates and peptide mimics. Biopolymers 2005; 80:98-150. [PMID: 15795926 DOI: 10.1002/bip.20213] [Citation(s) in RCA: 81] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Azabicyclo[X.Y.0]alkanone amino acids are challenging synthetic targets and useful tools for studying structure-activity relationships of native peptide ligands. They have been employed to increase potency and stability in conformationally rigid enzyme inhibitors and receptor ligands. Since last reviewed in 1997, activity in their synthesis and application has increased significantly and access is now available to a wider diversity of these peptide mimics. This review focuses on recent syntheses of these heterocyclic amino acids and their application in the investigation of biologically active peptides and peptide mimics.
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Affiliation(s)
- Jérôme Cluzeau
- Département de Chimie, Université de Montréal, Montréal H3C 3J7, Québec, Canada
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24
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Benito JM, Rubio E, Gómez-Garcı́a M, Mellet CO, Garcı́a Fernández JM. Carbohydrate-derived spiroketals: stereoselective synthesis of di-d-fructose dianhydrides. Tetrahedron 2004. [DOI: 10.1016/j.tet.2004.05.032] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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A short and efficient synthesis of α-C-(1→3)-linked disaccharides containing deoxyhexopyranoses. ACTA ACUST UNITED AC 2004. [DOI: 10.1016/j.tetasy.2004.01.023] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Affiliation(s)
- Alessandro Dondoni
- Dipartimento di Chimica, Laboratorio di Chimica Organica,Università di Ferrara, Via L. Borsari 46, 44100 Ferrara, Italy.
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Ikegami S, Li X, Takahashi H, Ohtake H. Synthesis of Ketosyl Spiro-isoxazolidine by 1,3-Dipolar Cycloaddition of 1-Methylenesugars with Nitrones Å|A New Access to C-Glycosyl Amino Acids. HETEROCYCLES 2003. [DOI: 10.3987/com-02-s52] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Dondoni A, Giovannini PP, Perrone D. New synthesis of pyrrolidine homoazasugars via aminohomologation of furanoses and their use for the stereoselective synthesis of aza-C-disaccharides. J Org Chem 2002; 67:7203-14. [PMID: 12375946 DOI: 10.1021/jo020252d] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The introduction of a formyl group at the anomeric center of 2,3,5-tri-O-benzyl furanoses and substitution of the ring oxygen with a basic nitrogen atom (aminohomologation) was carried out via stereoselective addition of 2-lithiothiazole to N-benzyl, N-furanosylhydroxylamines (masked N-benzyl sugar nitrones), followed by reductive dehydroxylation of the resulting open-chain adducts, and then ring closure via intramolecular displacement of the free hydroxy group by the amino group and unmasking of the formyl group from the thiazole ring. The resulting formyl aza-C-glycosides were transformed into 2,5-dideoxy-2,5-imino-hexitols (pyrrolidine homoazasugars) by reduction of the formyl to the hydroxymethyl group and removal of the O- and N-benzyl groups by hydrogenolysis. This reaction sequence was applied to four furanoses (D-arabino, D-ribo, D-lyxo, L-xylo) to give the hydroxy- and amino-free homoazasugars, including the natural product 2,5-dideoxy-2,5-imino-D-mannitol, in 17% overall yields (six steps). The formyl aza-C-glycosides proved to be valuable intermediates for the synthesis of more complex derivatives. In fact, these sugar aldehydes were employed in Wittig-type coupling reactions with galactose and ribose phosphoranes to give bis-glycosylated alkenes, which upon reduction of the double bond were transformed into methylene isosteres of (1-->6)- and (1-->5)-linked disaccharides in which one of the two sugar moieties was an azasugar (aza-(1-->x)-C-disaccharides).
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Affiliation(s)
- Alessandro Dondoni
- Dipartimento di Chimica, Laboratorio di Chimica Organica, Università di Ferrara, Via L. Borsari 46, 44100 Ferrara, Italy.
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Gros C, Boulègue C, Galeotti N, Niel G, Jouin P. Stereochemical control in the preparation of α-amino N-methylthiazolidine masked aldehydes used for peptide aldehydes synthesis. Tetrahedron 2002. [DOI: 10.1016/s0040-4020(02)00115-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Li X, Takahashi H, Ohtake H, Shiro M, Ikegami S. Stereoselective synthesis and structure elucidation of spiro-ketodisaccharides. Tetrahedron 2001. [DOI: 10.1016/s0040-4020(01)00775-x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Dondoni A, Formaglio P, Marra A, Massi A. Selectivity in the SmI2-induced deoxygenation of thiazolylketoses for formyl C-glycoside synthesis and revised structure of C-ribofuranosides. Tetrahedron 2001. [DOI: 10.1016/s0040-4020(01)00736-0] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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