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Crystallization- and Metal-Driven Selection of Discrete Macrocycles/Cages and Their Metallosupramolecular Polymers from Dynamic Systemic Networks. CHEMISTRY 2022. [DOI: 10.3390/chemistry4040084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Reversible imine- and metal-coordination reactions are dynamic enough to produce complex libraries of macrocycles, cages, and supramolecular polymers in solution, from which amplification effects have been identified in solution or during crystallization in response to ligand- and metal-driven selection modes. Crystallization-driven selection can lead to the amplification of unexpected metallosupramolecular architectures. The addition of Ag+ triggered the change of the optimal components, so that the crystallization process showed different ligand preferences than in solution. The most packed constituents are amplified in the solid state, taking into account the optimal coordination of metal ions together with non-specific non-covalent interactions between the macrocycle packed in dimers or trimers in the solid state.
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2
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Su D, Zhang Y, Ulrich S, Barboiu M. Constitutional Dynamic Inhibition/Activation of Carbonic Anhydrases. Chempluschem 2021; 86:1500-1510. [PMID: 34327867 DOI: 10.1002/cplu.202100263] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 07/14/2021] [Indexed: 12/23/2022]
Abstract
In this review we consider one important member of the metalloenzymes family, the carbonic anhydrase (CA), involved in the treatment of several common diseases. Different approaches have emerged to regulate the activity of CA, mostly acting on the inner catalytic active site or outer microenvironment of the enzyme, leading to inhibition or activation of CA. In recent years, gradually increased attention has focused on the adoption of constitutional dynamic chemistry (CDC) strategies for the screening and discovery of potent inhibitors or activators. The participation of reversible covalent bonds enabled the enzyme itself to select the optimal ligands obtained from diverse building blocks with comparatively higher degree of variety, resulting in the fittest recognition of enzyme ligands from complex dynamic systems. With the increasing implementation of CDC for enzyme targets, it shows great potential for drug discovery or CO2 capture applications.
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Affiliation(s)
- Dandan Su
- Institut Europeen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM-CNRS, Place E. Bataillon CC047, 34095, Montpellier, France
- Institut des Biomolécules Max Mousseron (IBMM), CNRS, Université de Montpellier, ENSCM, Montpellier, France
| | - Yan Zhang
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, 1800 Lihu Avenue, Wuxi, 214122, P. R. China
| | - Sébastien Ulrich
- Institut des Biomolécules Max Mousseron (IBMM), CNRS, Université de Montpellier, ENSCM, Montpellier, France
| | - Mihail Barboiu
- Institut Europeen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM-CNRS, Place E. Bataillon CC047, 34095, Montpellier, France
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3
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Si M, Zhu W, Zhang Y, Barboiu M, Chen J. Fluorodynamers Displaying Tunable Fluorescence on Constitutional Exchanges in Solution and at Solid Film-Solution Interface. Chemistry 2020; 26:10191-10194. [PMID: 32220132 DOI: 10.1002/chem.202000981] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Indexed: 12/18/2022]
Abstract
Dynamic covalent polymers-dynamers-are adaptive materials that offer timely variant adaptive macroscopic organization across extended scales. In the current study, imine exchange reactions and fluorescence transfer can occur at the interfaces between various solutions and solid state dynameric films. The fluorescence quenching upon imine formations for designed fluorogen was successfully demonstrated, and this tunable fluorescence was further used to study the re-composition of a solid film. Moreover, the dynamic covalent films also exhibited responsiveness to competing amines and acid/base conditions, both in solutions and solid film-solution interface. This work can provide more insights into interface dynamic chemistry and holds great potential for further applications in optical and biomedical materials.
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Affiliation(s)
- Mingran Si
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, 1800 Lihu Avenue, Wuxi, 214122, P. R. China
| | - Weijia Zhu
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, 1800 Lihu Avenue, Wuxi, 214122, P. R. China
| | - Yan Zhang
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, 1800 Lihu Avenue, Wuxi, 214122, P. R. China
| | - Mihail Barboiu
- Institut European des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM-CNRS, Place E. Bataillon CC047, Montpellier, 34095, France
| | - Jinghua Chen
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, 1800 Lihu Avenue, Wuxi, 214122, P. R. China
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4
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Zhang Y, Qi Y, Ulrich S, Barboiu M, Ramström O. Dynamic Covalent Polymers for Biomedical Applications. MATERIALS CHEMISTRY FRONTIERS 2020; 4:489-506. [PMID: 33791102 PMCID: PMC8009197 DOI: 10.1039/c9qm00598f] [Citation(s) in RCA: 76] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
The rapid development of supramolecular polymer chemistry and constitutional dynamic chemistry over the last decades has made tremendous impact on the emergence of dynamic covalent polymers. These materials are formed through reversible covalent bonds, endowing them with adaptive and responsive features that have resulted in high interest throughout the community. Owing to their intriguing properties, such as self-healing, shape-memory effects, recyclability, degradability, stimuli-responsiveness, etc., the materials have found multiple uses in a wide range of areas. Of special interest is their increasing use for biomedical applications, and many examples have been demonstrated in recent years. These materials have thus been used for the recognition and sensing of biologically active compounds, for the modulation of enzyme activity, for gene delivery, and as materials for cell culture, delivery, and wound-dressing. In this review, some of these endeavors are discussed, highlighting the many advantages and unique properties of dynamic covalent polymers for use in biology and biomedicine.
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Affiliation(s)
- Yan Zhang
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, Wuxi, 214122, P.R. China
| | - Yunchuan Qi
- Department of Chemistry, University of Massachusetts Lowell, One University Ave. Lowell, MA 01854, USA
| | - Sébastien Ulrich
- Institut des Biomolécules Max Mousseron (IBMM), CNRS, Université of Montpellier, ENSCM, Montpellier, France
| | - Mihail Barboiu
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, F-34095, Montpellier, France
| | - Olof Ramström
- Department of Chemistry, University of Massachusetts Lowell, One University Ave. Lowell, MA 01854, USA
- Department of Chemical and Biomedical Sciences, Linnaeus University, SE-39182 Kalmar, Sweden
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5
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Solà J, Jimeno C, Alfonso I. Exploiting complexity to implement function in chemical systems. Chem Commun (Camb) 2020; 56:13273-13286. [DOI: 10.1039/d0cc04170j] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
This feature article reflects a personal overview of the importance of complexity as an additional parameter to be considered in chemical research, being illustrated with selected examples in molecular recognition and catalysis.
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Affiliation(s)
- Jordi Solà
- Department of Biological Chemistry
- Institute of Advanced Chemistry of Catalonia
- IQAC-CSIC
- 08034 Barcelona
- Spain
| | - Ciril Jimeno
- Department of Biological Chemistry
- Institute of Advanced Chemistry of Catalonia
- IQAC-CSIC
- 08034 Barcelona
- Spain
| | - Ignacio Alfonso
- Department of Biological Chemistry
- Institute of Advanced Chemistry of Catalonia
- IQAC-CSIC
- 08034 Barcelona
- Spain
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6
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Nagaraju S, Sathish K, Satyanarayana N, Paplal B, Kashinath D. Regioselective synthesis of spiro isoxazole‐oxindole‐tetrahydrothiophene hybrids
via
cascade reactions under catalyst‐free conditions. J Heterocycl Chem 2020. [DOI: 10.1002/jhet.3803] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Sakkani Nagaraju
- Department of ChemistryNational Institute of Technology Warangal ‐506 004 India
| | - Kota Sathish
- Department of ChemistryNational Institute of Technology Warangal ‐506 004 India
| | - Neeli Satyanarayana
- Department of ChemistryNational Institute of Technology Warangal ‐506 004 India
| | - Banoth Paplal
- Department of ChemistryNational Institute of Technology Warangal ‐506 004 India
| | - Dhurke Kashinath
- Department of ChemistryNational Institute of Technology Warangal ‐506 004 India
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7
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Shin M, Seo J, Baek Y, Lee T, Jang M, Park C. Novel and Efficient Synthesis of Phenethyl Formate via Enzymatic Esterification of Formic Acid. Biomolecules 2020; 10:biom10010070. [PMID: 31906270 PMCID: PMC7022603 DOI: 10.3390/biom10010070] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Revised: 11/18/2019] [Accepted: 11/24/2019] [Indexed: 12/19/2022] Open
Abstract
Current methods for the production of esters, including chemical synthesis and extraction from natural sources, are hindered by low yields and environmental pollution. The enzymatic synthesis of these compounds could help overcome these problems. In this study, phenethyl formate, a commercially valuable formate ester, was synthesized using commercial immobilized lipases. The effects of specific enzymes, enzyme concentration, formic acid:phenethyl alcohol molar ratio, temperature, and solvent were studied in order to optimize the synthesis conditions, which were identified as 15 g/L of Novozym 435 enzyme, a 1:5 formic acid:phenethyl alcohol molar ratio, a 40 °C reaction temperature, and 1,2-dichloroethane as the solvent. Under these conditions, phenethyl formate was obtained in a conversion yield of 95.92%. In addition, when 1,2-dichloroethane was replaced with toluene as the solvent, the enzyme could be recycled for at least 20 reactions with a steady conversion yield above 92%, testifying to the economic aspects of the process. The enzymatic synthesis of phenethyl formate using the proposed method is more environmentally friendly than methods currently employed in academic and laboratory settings. Moreover, the method has the potential to enhance the value-added properties of formic acid owing to its downstream use in the production of commercially essential esters.
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Affiliation(s)
- Minguk Shin
- Department of Chemical Engineering, Kwangwoon University, Seoul 01897, Korea; (M.S.); (J.S.); (Y.B.); (T.L.)
| | - Jeongbae Seo
- Department of Chemical Engineering, Kwangwoon University, Seoul 01897, Korea; (M.S.); (J.S.); (Y.B.); (T.L.)
| | - Yesol Baek
- Department of Chemical Engineering, Kwangwoon University, Seoul 01897, Korea; (M.S.); (J.S.); (Y.B.); (T.L.)
| | - Taek Lee
- Department of Chemical Engineering, Kwangwoon University, Seoul 01897, Korea; (M.S.); (J.S.); (Y.B.); (T.L.)
| | - Min Jang
- Department of Environmental Engineering, Kwangwoon University, Seoul 01897, Korea;
| | - Chulhwan Park
- Department of Chemical Engineering, Kwangwoon University, Seoul 01897, Korea; (M.S.); (J.S.); (Y.B.); (T.L.)
- Correspondence:
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8
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Zhang Y, Barboiu M, Ramström O, Chen J. Surface-Directed Selection of Dynamic Constitutional Frameworks as an Optimized Microenvironment for Controlled Enzyme Activation. ACS Catal 2019. [DOI: 10.1021/acscatal.9b04938] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Yan Zhang
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, Wuxi 214122, P.R. China
| | - Mihail Barboiu
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, F-34095 Montpellier, France
| | - Olof Ramström
- Department of Chemistry, University of Massachusetts Lowell, One University Avenue, Lowell, Massachusetts 01854, United States
- Department of Chemistry and Biomedical Sciences, Linnaeus University, SE-39182 Kalmar, Sweden
| | - Jinghua Chen
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, Wuxi 214122, P.R. China
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9
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Zhang Y, Zhang Y, Ramström O. Dynamic Covalent Kinetic Resolution. CATALYSIS REVIEWS, SCIENCE AND ENGINEERING 2019; 62:66-95. [PMID: 33716355 PMCID: PMC7953846 DOI: 10.1080/01614940.2019.1664031] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Implemented with the highly efficient concept of Dynamic Kinetic Resolution (DKR), dynamic covalent chemistry can be a useful strategy for the synthesis of enantioenriched compounds. This gives rise to dynamic covalent kinetic resolution (DCKR), a subset of DKR that over the last decades has emerged as increasingly fruitful, with many applications in asymmetric synthesis and catalysis. All DKR protocols are composed of two important parts: substrate racemization and asymmetric transformation, which can lead to yields of >50% with good enantiomeric excesses (ee) of the products. In DCKR systems, by utilizing reversible covalent reactions as the racemization strategy, the substrate enantiomers can be easily interconverted without the presence of any racemase or transition metal catalyst. Enzymes or other chiral catalysts can then be adopted for the resolution step, leading to products with high enantiopurities. This tutorial review focuses on the development of DCKR systems, based on different reversible reactions, and their applications in asymmetric synthesis.
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Affiliation(s)
- Yan Zhang
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Pharmaceutical Sciences, Jiangnan University, Wuxi, 214122, P.R. China
| | - Yang Zhang
- College of Chemistry and Chemical Engineering, Hunan University, Changsha 410082, P.R. China
| | - Olof Ramström
- Department of Chemistry, University of Massachusetts Lowell, One University Ave., MA, 01854 Lowell, USA
- Department of Chemistry and Biomedical Sciences, Linnaeus University, SE-39182 Kalmar, Sweden
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10
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Zhang Y, Xie S, Yan M, Ramström O. Enzyme- and ruthenium-catalyzed dynamic kinetic resolution involving cascade alkoxycarbonylations for asymmetric synthesis of 5-Substituted N-Aryloxazolidinones. MOLECULAR CATALYSIS 2019. [DOI: 10.1016/j.mcat.2019.03.020] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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11
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Xu J, Hu L. Asymmetric one-pot synthesis of five- and six-membered lactones via dynamic covalent kinetic resolution: Exploring the regio- and stereoselectivities of lipase. Tetrahedron Lett 2019. [DOI: 10.1016/j.tetlet.2019.02.030] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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12
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Zamberlan F, Fantinati A, Trapella C. 1,4-Dithiane-2,5-diol: An Attractive Platform for the Synthesis of Sulfur-Containing Functionalized Heterocycles. European J Org Chem 2018. [DOI: 10.1002/ejoc.201701785] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Francesco Zamberlan
- School of Chemistry; University of Lincoln; Brayford Pool LN6 7TS Lincoln Lincolnshire United Kingdom
| | - Anna Fantinati
- Dipartimento di Scienze Chimiche e Farmaceutiche; Università degli Studi di Ferrara; Via Fossato di Mortara 17 44121 - Ferrara Italy
| | - Claudio Trapella
- Dipartimento di Scienze Chimiche e Farmaceutiche; Università degli Studi di Ferrara; Via Fossato di Mortara 17 44121 - Ferrara Italy
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13
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Zhang Y, Petit E, Barboiu M. Multivalent Dendrimers and their Differential Recognition of Short Single-Stranded DNAs of Various Length and Sequence. Chempluschem 2018; 83:354-360. [PMID: 31957369 DOI: 10.1002/cplu.201800081] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Revised: 03/22/2018] [Indexed: 12/18/2022]
Abstract
Polycationic dendrimers were generated through simple and versatile reversible amine/aldehyde-imine chemistry. The inherent CD spectroscopic signal arising from the helical structures of single-stranded DNA (ssDNA) undergoes a dramatic amplification in the presence of the synthesised polycationic dendrimers. Compared to the first-generation core molecule, the second-generation dendrimer shows high spectroscopic responses upon chiral recognition of short ssDNA, owing to the combination of self-assembly and multivalency effects. The maximum signal variation is reached at the molar ratio at which the ratio between the negative charges in ssDNA balance the positive charges of the dendrimers, thus the approach enables differential recognition of ssDNAs of different lengths. Altogether, these results accelerate the simple and systematic discovery of efficient adaptive molecules for biomimetic recognition of ssDNA with high accuracy.
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Affiliation(s)
- Yan Zhang
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, 34095, Montpellier, France.,School of Pharmaceutical Sciences, Jiangnan University, Lihu Road 1800, 214122, Wuxi, P. R. China
| | - Eddy Petit
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, 34095, Montpellier, France
| | - Mihail Barboiu
- Institut Européen des Membranes, Adaptive Supramolecular Nanosystems Group, University of Montpellier, ENSCM, CNRS, Place Eugène Bataillon, CC 047, 34095, Montpellier, France
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14
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Base-catalyzed cascade 1,6-sulfur-Michael/Henry reaction of trifluoromethyl-substituted styrylisoxazoles: Diastereoselective synthesis of tetrahydrothiophenes with a trifluoromethylated quaternary center. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.01.090] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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15
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Zhang Y, Supuran CT, Barboiu M. Exponential Activation of Carbonic Anhydrase by Encapsulation in Dynameric Host Matrices with Chiral Discrimination. Chemistry 2017; 24:715-720. [PMID: 29119623 DOI: 10.1002/chem.201704605] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2017] [Indexed: 12/12/2022]
Abstract
Herein an unexpected exponential activation of bovine carbonic anhydrase (bCA) in aqueous solutions in the presence of dynameric host matrices is reported. Successive experiments confirmed the important role of dynamic imine exchange within the dynameric host structures for direct enzyme activation. This allows for optimal encapsulation of the guest enzyme, whereas the presence of external proton-sponge amino groups is less important. Non-exchanging polymeric sec-amine congeners formed from imine reduction of dynameric structures show no obvious activation on bCA. Although the dynamers synthesized from diamino chiral-pair precursors displayed similar activation constants toward bCA, different activation delay times were observed from these two dynamers of opposite optical activity. The circular dichroism (CD) spectra demonstrate selective structural changes in the secondary structure of bCA upon dynameric encapsulation in aqueous solution. The different interaction molds observed in CD spectra for the dynamers with opposite chirality explain the longer activation time required for one of the dynamers.
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Affiliation(s)
- Yan Zhang
- Adaptive Supramolecular Nanosystems Group, Institut Européen des Membranes, University of Montpellier, ENSCM-CNRS, Place Eugène Bataillon, CC 047, 34095, Montpellier, France.,School of Pharmaceutical Sciences, Jiangnan University, Lihu Road 1800, 214122, Wuxi, P.R. China
| | - Claudiu T Supuran
- Laboratorio di Chimica Bio-inorganica, Università degli Studi di Firenze, Polo Scientifico, Rm. 188, Via della Lastruccia 3, 50019, Sesto Fiorentino, Italy
| | - Mihail Barboiu
- Adaptive Supramolecular Nanosystems Group, Institut Européen des Membranes, University of Montpellier, ENSCM-CNRS, Place Eugène Bataillon, CC 047, 34095, Montpellier, France
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16
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“On-water” catalyst-free, one-pot synthesis of quaternary centered and spiro-tetrahydrothiophene-barbiturate hybrids. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.06.029] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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17
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18
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Chen XY, Wang JL, Lin XF, Wu Q. Lipase-initiated one-pot synthesis of spirooxazino derivatives: redesign of multicomponent reactions to expand substrates scope and application potential. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.04.060] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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19
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Meninno S, Volpe C, Della Sala G, Capobianco A, Lattanzi A. Stereoselective amine-thiourea-catalysed sulfa-Michael/nitroaldol cascade approach to 3,4,5-substituted tetrahydrothiophenes bearing a quaternary stereocenter. Beilstein J Org Chem 2016; 12:643-7. [PMID: 27340455 PMCID: PMC4901985 DOI: 10.3762/bjoc.12.63] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2015] [Accepted: 03/12/2016] [Indexed: 02/04/2023] Open
Abstract
An investigation on the stereoselective cascade sulfa-Michael/aldol reaction of nitroalkenes and commercially available 1,4-dithiane-2,5-diol to 3,4,5-substituted tetrahydrothiophenes, bearing a quaternary stereocenter, is presented. A secondary amine thiourea derived from (R,R)-1,2-diphenylethylamine was found to be the most effective catalyst when using trans-β-methyl-β-nitrostyrenes affording the heterocyclic products in good yields and moderate stereoselectivities.
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Affiliation(s)
- Sara Meninno
- Dipartimento di Chimica e Biologia "A. Zambelli", Via Giovanni Paolo II, 84084, Fisciano, Italy
| | - Chiara Volpe
- Dipartimento di Chimica e Biologia "A. Zambelli", Via Giovanni Paolo II, 84084, Fisciano, Italy
| | - Giorgio Della Sala
- Dipartimento di Chimica e Biologia "A. Zambelli", Via Giovanni Paolo II, 84084, Fisciano, Italy
| | - Amedeo Capobianco
- Dipartimento di Chimica e Biologia "A. Zambelli", Via Giovanni Paolo II, 84084, Fisciano, Italy
| | - Alessandra Lattanzi
- Dipartimento di Chimica e Biologia "A. Zambelli", Via Giovanni Paolo II, 84084, Fisciano, Italy
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20
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Orrillo AG, Escalante AM, Furlan RLE. Dithioacetal Exchange: A New Reversible Reaction for Dynamic Combinatorial Chemistry. Chemistry 2016; 22:6746-9. [PMID: 26990904 DOI: 10.1002/chem.201600208] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2016] [Indexed: 12/22/2022]
Abstract
Reversibility of dithioacetal bond formation is reported under acidic mild conditions. Its utility for dynamic combinatorial chemistry was explored by combining it with orthogonal disulfide exchange. In such a setup, thiols are positioned at the intersection of both chemistries, constituting a connecting node between temporally separated networks.
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Affiliation(s)
- A Gastón Orrillo
- Instituto de Investigaciones para el Descubrimiento de Fármacos de Rosario (IIDEFAR, UNR-CONICET), Ocampo y Esmeralda, Rosario, 2000), Argentina
| | - Andrea M Escalante
- Instituto de Investigaciones para el Descubrimiento de Fármacos de Rosario (IIDEFAR, UNR-CONICET), Ocampo y Esmeralda, Rosario, 2000), Argentina
| | - Ricardo L E Furlan
- Instituto de Investigaciones para el Descubrimiento de Fármacos de Rosario (IIDEFAR, UNR-CONICET), Ocampo y Esmeralda, Rosario, 2000), Argentina. .,Farmacognosia, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Suipacha 531, Rosario, 2000), Argentina.
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21
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Zhang Y, Jayawardena HSN, Yan M, Ramström O. Enzyme classification using complex dynamic hemithioacetal systems. Chem Commun (Camb) 2016; 52:5053-6. [PMID: 26987550 PMCID: PMC4820758 DOI: 10.1039/c6cc01823h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A complex dynamic hemithioacetal system was used in combination with pattern recognition methodology to classify lipases into distinct groups.
A complex dynamic hemithioacetal system was generated for the evaluation of lipase reactivities in organic media. In combination with pattern recognition methodology, twelve different lipases were successfully classified into four distinct groups following their reaction selectivities and reactivities. A probe lipase was further categorized using the training matrix with predicted reactivity.
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Affiliation(s)
- Yan Zhang
- Department of Chemistry, KTH - Royal Institute of Technology, Teknikringen 30, 10044 Stockholm, Sweden.
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22
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Borowiecki P, Paprocki D, Dudzik A, Plenkiewicz J. Chemoenzymatic Synthesis of Proxyphylline Enantiomers. J Org Chem 2016; 81:380-95. [DOI: 10.1021/acs.joc.5b01840] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Paweł Borowiecki
- Warsaw University of Technology, Faculty of Chemistry,
Institute of Biotechnology, Koszykowa St. 3, 00-664 Warsaw, Poland
| | - Daniel Paprocki
- Warsaw University of Technology, Faculty of Chemistry,
Institute of Biotechnology, Koszykowa St. 3, 00-664 Warsaw, Poland
| | - Agnieszka Dudzik
- Jerzy
Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Niezapominajek St. 8, 30-239 Cracow, Poland
| | - Jan Plenkiewicz
- Warsaw University of Technology, Faculty of Chemistry,
Institute of Biotechnology, Koszykowa St. 3, 00-664 Warsaw, Poland
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23
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Zhang Y, Feng WX, Legrand YM, Supuran CT, Su CY, Barboiu M. Dynameric host frameworks for the activation of lipase through H-bond and interfacial encapsulation. Chem Commun (Camb) 2016; 52:13768-13770. [DOI: 10.1039/c6cc08399d] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
The encapsulation of lipase by dynamic polymers – dynamers – was used to activate enzymatic reactions.
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Affiliation(s)
- Yan Zhang
- Institut Européen des Membranes
- Adaptive Supramolecular Nanosystems Group
- F-34095 Montpellier
- France
| | - Wei-Xu Feng
- Lehn Institute of Functional Materials
- School of Chemistry and Chemical Engineering
- Sun Yat-Sen University
- Guangzhou 510275
- China
| | - Yves-Marie Legrand
- Institut Européen des Membranes
- Adaptive Supramolecular Nanosystems Group
- F-34095 Montpellier
- France
| | - Claudiu T. Supuran
- Università degli Studi di Firenze
- Neurofarba Department
- Sezione di Scienze Farmaceutiche
- 50019 Sesto Fiorentino
- Italy
| | - Cheng-Yong Su
- Lehn Institute of Functional Materials
- School of Chemistry and Chemical Engineering
- Sun Yat-Sen University
- Guangzhou 510275
- China
| | - Mihail Barboiu
- Institut Européen des Membranes
- Adaptive Supramolecular Nanosystems Group
- F-34095 Montpellier
- France
- Lehn Institute of Functional Materials
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24
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Wang J, Li P, Yang Z, Chen N, Xu J. Insights into the diastereoselective control in the sulfa-Michael addition of thiols to nitroalkenes: stereoelectronic effect in the cyclic chelated transition state. Tetrahedron 2016. [DOI: 10.1016/j.tet.2015.11.030] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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25
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Zhang Y, Zhang Y, Ren Y, Ramström O. Synthesis of chiral oxazolidinone derivatives through lipase-catalyzed kinetic resolution. ACTA ACUST UNITED AC 2015. [DOI: 10.1016/j.molcatb.2015.08.004] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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26
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de Miranda AS, Miranda LS, de Souza RO. Lipases: Valuable catalysts for dynamic kinetic resolutions. Biotechnol Adv 2015; 33:372-93. [DOI: 10.1016/j.biotechadv.2015.02.015] [Citation(s) in RCA: 120] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2014] [Revised: 02/10/2015] [Accepted: 02/25/2015] [Indexed: 12/22/2022]
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27
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Characterization and mechanism insight of accelerated catalytic promiscuity of Sulfolobus tokodaii (ST0779) peptidase for aldol addition reaction. Appl Microbiol Biotechnol 2015; 99:9625-34. [DOI: 10.1007/s00253-015-6758-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Revised: 05/26/2015] [Accepted: 06/08/2015] [Indexed: 01/15/2023]
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28
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Gelation-driven Dynamic Systemic Resolution: in situ Generation and Self-Selection of an Organogelator. Sci Rep 2015; 5:11065. [PMID: 26062041 PMCID: PMC4462186 DOI: 10.1038/srep11065] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2014] [Accepted: 05/15/2015] [Indexed: 01/26/2023] Open
Abstract
An organogelator was produced and identified from a dynamic imine system, resolved and amplified by selective gelation. The formation of the organogel was monitored in situ by (1)H NMR, showing the existence of multiple reversible reactions operating simultaneously, and the redistribution of the involved species during gelation. The formed organogelator proved effective with a range of organic solvents, including DMSO, toluene, and longer, linear alcohols.
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29
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Wang J, Chen N, Xu J. Diastereoselectivity in the triethylamine-catalyzed sulfa-Michael addition of thiols to nitroalkenes: kinetic and thermodynamic control. Tetrahedron 2015. [DOI: 10.1016/j.tet.2015.04.053] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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30
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Li R, Perez B, Jian H, Gao R, Dong M, Guo Z. Acyl-peptide releasing enzyme from Sulfolobus tokodaii (ST0779) as a novel promiscuous biocatalyst for aldol addition. CATAL COMMUN 2015. [DOI: 10.1016/j.catcom.2015.03.030] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
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31
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Zhou Y, Yuan Y, You L, Anslyn EV. Dynamic Aminal-Based TPA Ligands. Chemistry 2015; 21:8207-13. [DOI: 10.1002/chem.201500105] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2015] [Indexed: 12/21/2022]
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32
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Nagaraju S, Satyanarayana N, Paplal B, Vasu AK, Kanvah S, Sridhar B, Sripadi P, Kashinath D. One-pot synthesis of functionalized isoxazole–thiolane hybrids via Knoevenagel condensation and domino sulfa-1,6-Michael/intramolecular vinylogous Henry reactions. RSC Adv 2015. [DOI: 10.1039/c5ra16721c] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
One-pot synthesis of isoxazole–thiolane hybrids are reported via the Knoevenagel condensation, domino sulfa-1,6-Michael/intramolecular vinylogous Henry reactions using piperidine (30 mol%) with >95% yields in 2–2.5 h overall reaction time.
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Affiliation(s)
- Sakkani Nagaraju
- Department of Chemistry
- National Institute of Technology
- Warangal-506 004
- India
| | - Neeli Satyanarayana
- Department of Chemistry
- National Institute of Technology
- Warangal-506 004
- India
| | - Banoth Paplal
- Department of Chemistry
- National Institute of Technology
- Warangal-506 004
- India
| | - Anuji K. Vasu
- Department of Chemistry
- Indian Institute of Technology, Gandhinagar
- Ahmedabad
- India
| | - Sriram Kanvah
- Department of Chemistry
- Indian Institute of Technology, Gandhinagar
- Ahmedabad
- India
| | - Balasubramanian Sridhar
- X-ray Crystallography Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad – 500007
- India
| | - Prabhakar Sripadi
- National Centre for Mass Spectrometry
- CSIR-Indian Institute of Chemical Technology
- Hyderabad – 500007
- India
| | - Dhurke Kashinath
- Department of Chemistry
- National Institute of Technology
- Warangal-506 004
- India
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33
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Milisavljević A, Stojanović M, Carević M, Mihailović M, Veličković D, Milosavić N, Bezbradica D. Lipase-Catalyzed Esterification of Phloridzin: Acyl Donor Effect on Enzymatic Affinity and Antioxidant Properties of Esters. Ind Eng Chem Res 2014. [DOI: 10.1021/ie5027259] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Ana Milisavljević
- Department of Biochemical Engineering and Biotechnology, Faculty
of Technology and Metallurgy, and ‡Department of Biochemistry, Faculty of Chemistry, University of Belgrade, 11000 Belgrade, Serbia
| | - Marija Stojanović
- Department of Biochemical Engineering and Biotechnology, Faculty
of Technology and Metallurgy, and ‡Department of Biochemistry, Faculty of Chemistry, University of Belgrade, 11000 Belgrade, Serbia
| | - Milica Carević
- Department of Biochemical Engineering and Biotechnology, Faculty
of Technology and Metallurgy, and ‡Department of Biochemistry, Faculty of Chemistry, University of Belgrade, 11000 Belgrade, Serbia
| | - Mladen Mihailović
- Department of Biochemical Engineering and Biotechnology, Faculty
of Technology and Metallurgy, and ‡Department of Biochemistry, Faculty of Chemistry, University of Belgrade, 11000 Belgrade, Serbia
| | - Dušan Veličković
- Department of Biochemical Engineering and Biotechnology, Faculty
of Technology and Metallurgy, and ‡Department of Biochemistry, Faculty of Chemistry, University of Belgrade, 11000 Belgrade, Serbia
| | - Nenad Milosavić
- Department of Biochemical Engineering and Biotechnology, Faculty
of Technology and Metallurgy, and ‡Department of Biochemistry, Faculty of Chemistry, University of Belgrade, 11000 Belgrade, Serbia
| | - Dejan Bezbradica
- Department of Biochemical Engineering and Biotechnology, Faculty
of Technology and Metallurgy, and ‡Department of Biochemistry, Faculty of Chemistry, University of Belgrade, 11000 Belgrade, Serbia
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34
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Sakulsombat M, Vongvilai P, Ramström O. Efficient asymmetric synthesis of 1-cyano-tetrahydroisoquinolines from lipase dual activity and opposite enantioselectivities in α-Aminonitrile resolution. Chemistry 2014; 20:11322-5. [PMID: 25055970 PMCID: PMC4497319 DOI: 10.1002/chem.201402615] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2014] [Indexed: 01/15/2023]
Abstract
Dual promiscuous racemization/amidation activities of lipases leading to efficient dynamic kinetic resolution protocols of racemic α-aminonitrile compounds are described. α-Amidonitrile products of high enantiomeric purity could be formed in high yields. Several lipases from different sources were shown to exhibit the dual catalytic activities, where opposite enantioselectivities could be recorded for certain substrates.
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Affiliation(s)
- Morakot Sakulsombat
- KTH Royal Institute of Technology Department of ChemistryTeknikringen 30, 10044 Stockholm (Sweden)
| | - Pornrapee Vongvilai
- KTH Royal Institute of Technology Department of ChemistryTeknikringen 30, 10044 Stockholm (Sweden)
- BioNet-Asia Co., Ltd. 19 Soi Udomsuk 37, Sukhumvit 103 road, Bangkok 10260 (Thailand)
| | - Olof Ramström
- KTH Royal Institute of Technology Department of ChemistryTeknikringen 30, 10044 Stockholm (Sweden)
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