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Laurent Q, Martinent R, Moreau D, Winssinger N, Sakai N, Matile S. Oligonucleotide Phosphorothioates Enter Cells by Thiol‐Mediated Uptake. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202107327] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Quentin Laurent
- School of Chemistry and Biochemistry National Centre of Competence in Research (NCCR) Chemical Biology University of Geneva Geneva Switzerland
| | - Rémi Martinent
- School of Chemistry and Biochemistry National Centre of Competence in Research (NCCR) Chemical Biology University of Geneva Geneva Switzerland
| | - Dimitri Moreau
- School of Chemistry and Biochemistry National Centre of Competence in Research (NCCR) Chemical Biology University of Geneva Geneva Switzerland
| | - Nicolas Winssinger
- School of Chemistry and Biochemistry National Centre of Competence in Research (NCCR) Chemical Biology University of Geneva Geneva Switzerland
| | - Naomi Sakai
- School of Chemistry and Biochemistry National Centre of Competence in Research (NCCR) Chemical Biology University of Geneva Geneva Switzerland
| | - Stefan Matile
- School of Chemistry and Biochemistry National Centre of Competence in Research (NCCR) Chemical Biology University of Geneva Geneva Switzerland
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2
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Laurent Q, Martinent R, Moreau D, Winssinger N, Sakai N, Matile S. Oligonucleotide Phosphorothioates Enter Cells by Thiol-Mediated Uptake. Angew Chem Int Ed Engl 2021; 60:19102-19106. [PMID: 34173696 PMCID: PMC8456962 DOI: 10.1002/anie.202107327] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Indexed: 12/14/2022]
Abstract
Oligonucleotide phosphorothioates (OPS) are DNA or RNA mimics where one phosphate oxygen is replaced by a sulfur atom. They have been shown to enter mammalian cells much more efficiently than non-modified DNA. Thus, solving one of the key challenges with oligonucleotide technology, OPS became very useful in practice, with several FDA-approved drugs on the market or in late clinical trials. However, the mechanism accounting for this facile cellular uptake is unknown. Here, we show that OPS enter cells by thiol-mediated uptake. The transient adaptive network produced by dynamic covalent pseudo-disulfide exchange is characterized in action. Inhibitors with nanomolar efficiency are provided, together with activators that reduce endosomal capture for efficient delivery of OPS into the cytosol, the site of action.
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Affiliation(s)
- Quentin Laurent
- School of Chemistry and BiochemistryNational Centre of Competence in Research (NCCR) Chemical BiologyUniversity of GenevaGenevaSwitzerland
| | - Rémi Martinent
- School of Chemistry and BiochemistryNational Centre of Competence in Research (NCCR) Chemical BiologyUniversity of GenevaGenevaSwitzerland
| | - Dimitri Moreau
- School of Chemistry and BiochemistryNational Centre of Competence in Research (NCCR) Chemical BiologyUniversity of GenevaGenevaSwitzerland
| | - Nicolas Winssinger
- School of Chemistry and BiochemistryNational Centre of Competence in Research (NCCR) Chemical BiologyUniversity of GenevaGenevaSwitzerland
| | - Naomi Sakai
- School of Chemistry and BiochemistryNational Centre of Competence in Research (NCCR) Chemical BiologyUniversity of GenevaGenevaSwitzerland
| | - Stefan Matile
- School of Chemistry and BiochemistryNational Centre of Competence in Research (NCCR) Chemical BiologyUniversity of GenevaGenevaSwitzerland
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Martinent R, Du D, López-Andarias J, Sakai N, Matile S. Oligomers of Cyclic Oligochalcogenides for Enhanced Cellular Uptake. Chembiochem 2020; 22:253-259. [PMID: 32975867 DOI: 10.1002/cbic.202000630] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2020] [Revised: 09/24/2020] [Indexed: 12/20/2022]
Abstract
Monomeric cyclic oligochalcogenides (COCs) are emerging as attractive transporters to deliver substrates of interest into the cytosol through thiol-mediated uptake. The objective of this study was to explore COC oligomers. We report a systematic evaluation of monomers, dimers, and trimers of asparagusic, lipoic, and diselenolipoic acid as well as their supramolecular monomers, dimers, trimers, and tetramers. COC dimers were more than twice as active as the monomers on both the covalent and noncovalent levels, whereas COC trimers were not much better than dimers. These trends might suggest that thiol-mediated uptake of COCs is synergistic over both short and long distances, that is, it involves more than two COCs and more than one membrane protein, although other interpretations cannot be excluded at this level of complexity. These results thus provide attractive perspectives for structural evolution as well as imminent use in practice. Moreover, they validate automated HC-CAPA as an invaluable method to collect comprehensive data on cytosolic delivery within a reasonable time at a level of confidence that is otherwise inconceivable.
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Affiliation(s)
- Rémi Martinent
- Department of Organic Chemistry, University of Geneva, Quai Ernest-Ansermet 30, 1211, Geneva, Switzerland
| | - Dongchen Du
- Department of Organic Chemistry, University of Geneva, Quai Ernest-Ansermet 30, 1211, Geneva, Switzerland
| | - Javier López-Andarias
- Department of Organic Chemistry, University of Geneva, Quai Ernest-Ansermet 30, 1211, Geneva, Switzerland
| | - Naomi Sakai
- Department of Organic Chemistry, University of Geneva, Quai Ernest-Ansermet 30, 1211, Geneva, Switzerland
| | - Stefan Matile
- Department of Organic Chemistry, University of Geneva, Quai Ernest-Ansermet 30, 1211, Geneva, Switzerland
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Cheng Y, Zong L, López‐Andarias J, Bartolami E, Okamoto Y, Ward TR, Sakai N, Matile S. Cell-Penetrating Dynamic-Covalent Benzopolysulfane Networks. Angew Chem Int Ed Engl 2019; 58:9522-9526. [PMID: 31168906 PMCID: PMC6618005 DOI: 10.1002/anie.201905003] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2019] [Indexed: 12/13/2022]
Abstract
Cyclic oligochalcogenides (COCs) are emerging as promising systems to penetrate cells. Clearly better than and different to the reported diselenolanes and epidithiodiketopiperazines, we introduce the benzopolysulfanes (BPS), which show efficient delivery, insensitivity to inhibitors of endocytosis, and compatibility with substrates as large as proteins. This high activity coincides with high reactivity, selectively toward thiols, exceeding exchange rates of disulfides under tension. The result is a dynamic-covalent network of extreme sulfur species, including cyclic oligomers, from dimers to heptamers, with up to nineteen sulfurs in the ring. Selection from this unfolding adaptive network then yields the reactivities and selectivities needed to access new uptake pathways. Contrary to other COCs, BPS show high retention on thiol affinity columns. The identification of new modes of cell penetration is important because they promise new solutions to challenges in delivery and beyond.
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Affiliation(s)
- Yangyang Cheng
- Department of Organic ChemistryUniversity of GenevaGenevaSwitzerland
| | - Lili Zong
- Department of Organic ChemistryUniversity of GenevaGenevaSwitzerland
- Current address: School of Pharmaceutical SciencesXiamen UniversityXiamen361102China
| | | | - Eline Bartolami
- Department of Organic ChemistryUniversity of GenevaGenevaSwitzerland
- Current address: SyMMES, UMR 5819CEA38054GrenobleFrance
| | | | - Thomas R. Ward
- Department of ChemistryUniversity of BaselBaselSwitzerland
| | - Naomi Sakai
- Department of Organic ChemistryUniversity of GenevaGenevaSwitzerland
| | - Stefan Matile
- Department of Organic ChemistryUniversity of GenevaGenevaSwitzerland
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Cheng Y, Zong L, López‐Andarias J, Bartolami E, Okamoto Y, Ward TR, Sakai N, Matile S. Cell‐Penetrating Dynamic‐Covalent Benzopolysulfane Networks. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201905003] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Yangyang Cheng
- Department of Organic ChemistryUniversity of Geneva Geneva Switzerland
| | - Lili Zong
- Department of Organic ChemistryUniversity of Geneva Geneva Switzerland
- Current address: School of Pharmaceutical SciencesXiamen University Xiamen 361102 China
| | | | - Eline Bartolami
- Department of Organic ChemistryUniversity of Geneva Geneva Switzerland
- Current address: SyMMES, UMR 5819CEA 38054 Grenoble France
| | | | - Thomas R. Ward
- Department of ChemistryUniversity of Basel Basel Switzerland
| | - Naomi Sakai
- Department of Organic ChemistryUniversity of Geneva Geneva Switzerland
| | - Stefan Matile
- Department of Organic ChemistryUniversity of Geneva Geneva Switzerland
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Méndez-Ardoy A, Lostalé-Seijo I, Montenegro J. Where in the Cell Is our Cargo? Methods Currently Used To Study Intracellular Cytosolic Localisation. Chembiochem 2018; 20:488-498. [PMID: 30178574 DOI: 10.1002/cbic.201800390] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2018] [Indexed: 12/14/2022]
Abstract
The internalisation and delivery of active substances into cells is a field of growing interest for chemical biology and therapeutics. As we move from small-molecule-based drugs towards bigger cargos, such as antibodies, enzymes, nucleases or nucleic acids, the development of efficient delivery systems becomes critical for their practical application. Different strategies and synthetic carriers have been developed; these include cationic lipids, gold nanoparticles, polymers, cell-penetrating peptides (CPPs), protein surface modification etc. However, all of these methodologies still present limitations relating to the precise targeting of the different intracellular compartments and, in particular, difficulties in access to the cellular cytosol. Additionally, the precise quantification of the cellular uptake of a compound is not enough to demonstrate delivery and/or functional activity. Therefore, methods to determine cellular distributions of cargos and carriers are of critical importance for identifying the barriers that are blocking the activity. Herein we survey the different techniques that can currently be used to track and to monitor the subcellular localisation of the synthetic compounds that we deliver inside cells.
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Affiliation(s)
- Alejandro Méndez-Ardoy
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Irene Lostalé-Seijo
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Javier Montenegro
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
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Chuard N, Gasparini G, Moreau D, Lörcher S, Palivan C, Meier W, Sakai N, Matile S. Strain-Promoted Thiol-Mediated Cellular Uptake of Giant Substrates: Liposomes and Polymersomes. Angew Chem Int Ed Engl 2017; 56:2947-2950. [DOI: 10.1002/anie.201611772] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2016] [Indexed: 01/13/2023]
Affiliation(s)
- Nicolas Chuard
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
| | - Giulio Gasparini
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- Current address: Firmenich SA, Division of Research and Development; Geneva Switzerland
| | - Dimitri Moreau
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
| | - Samuel Lörcher
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
- Department of Chemistry; University of Basel; Basel Switzerland
| | - Cornelia Palivan
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
- Department of Chemistry; University of Basel; Basel Switzerland
| | - Wolfgang Meier
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
- Department of Chemistry; University of Basel; Basel Switzerland
| | - Naomi Sakai
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
| | - Stefan Matile
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
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Chuard N, Gasparini G, Moreau D, Lörcher S, Palivan C, Meier W, Sakai N, Matile S. Strain-Promoted Thiol-Mediated Cellular Uptake of Giant Substrates: Liposomes and Polymersomes. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611772] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Nicolas Chuard
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
| | - Giulio Gasparini
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- Current address: Firmenich SA, Division of Research and Development; Geneva Switzerland
| | - Dimitri Moreau
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
| | - Samuel Lörcher
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
- Department of Chemistry; University of Basel; Basel Switzerland
| | - Cornelia Palivan
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
- Department of Chemistry; University of Basel; Basel Switzerland
| | - Wolfgang Meier
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
- Department of Chemistry; University of Basel; Basel Switzerland
| | - Naomi Sakai
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
| | - Stefan Matile
- School of Chemistry and Biochemistry; University of Geneva; Geneva Switzerland
- National Centre of Competence in Research (NCCR) Molecular Systems Engineering; Switzerland
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Gasparini G, Sargsyan G, Bang EK, Sakai N, Matile S. Ring Tension Applied to Thiol-Mediated Cellular Uptake. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201502358] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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10
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Gasparini G, Sargsyan G, Bang EK, Sakai N, Matile S. Ring Tension Applied to Thiol-Mediated Cellular Uptake. Angew Chem Int Ed Engl 2015; 54:7328-31. [DOI: 10.1002/anie.201502358] [Citation(s) in RCA: 104] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Indexed: 01/31/2023]
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12
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Zhai L, Liang J, Guo X, Zhao Y, Wu C. Extraordinary Modulation of Disulfide Redox-Responsiveness by Cooperativity of Twin-Disulfide Bonds. Chemistry 2014; 20:17507-14. [DOI: 10.1002/chem.201404909] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2014] [Indexed: 11/10/2022]
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Brülisauer L, Valentino G, Morinaga S, Cam K, Thostrup Bukrinski J, Gauthier MA, Leroux JC. Bio-reduction of Redox-Sensitive Albumin Conjugates in FcRn-Expressing Cells. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201404238] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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14
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Brülisauer L, Valentino G, Morinaga S, Cam K, Thostrup Bukrinski J, Gauthier MA, Leroux JC. Bio-reduction of Redox-Sensitive Albumin Conjugates in FcRn-Expressing Cells. Angew Chem Int Ed Engl 2014; 53:8392-6. [DOI: 10.1002/anie.201404238] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2014] [Indexed: 11/10/2022]
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Carmine A, Domoto Y, Sakai N, Matile S. Comparison of lipoic and asparagusic acid for surface-initiated disulfide-exchange polymerization. Chemistry 2013; 19:11558-63. [PMID: 23893874 DOI: 10.1002/chem.201301567] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2013] [Indexed: 01/06/2023]
Abstract
Bring it on: Organic chemistry on surfaces and in solution is not the same; this study offers a perfect example that small changes (from 27 to 35°; see graphic) can result in big consequences. Strained cyclic disulfides from asparagusic, but not lipoic acid, are ideal for growing functional architectures directly on surfaces; for the substrate-initiated synthesis of cell-penetrating poly(disulfide)s in solution, exactly the contrary is true.
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Affiliation(s)
- Alessio Carmine
- Department of Organic Chemistry, University of Geneva, Geneva, Switzerland
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