1
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Sun J, Decato DA, Bryantsev VS, John EA, Berryman OB. The interplay between hydrogen and halogen bonding: substituent effects and their role in the hydrogen bond enhanced halogen bond. Chem Sci 2023; 14:8924-8935. [PMID: 37621436 PMCID: PMC10445465 DOI: 10.1039/d3sc02348f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Accepted: 07/20/2023] [Indexed: 08/26/2023] Open
Abstract
The hydrogen bond enhanced halogen bond (HBeXB) has recently been used to effectively improve anion binding, organocatalysis, and protein structure/function. In this study, we present the first systematic investigation of substituent effects in the HBeXB. NMR analysis confirmed intramolecular HBing between the amine and the electron-rich belt of the XB donor (N-H⋯I). Gas-phase density functional theory studies showed that the influence of HBing on the halogen atom is more sensitive to substitution on the HB donor ring (R1). The NMR studies revealed that the intramolecular HBing had a significant impact on receptor performance, resulting in a 50-fold improvement. Additionally, linear free energy relationship (LFER) analysis was employed for the first time to study the substituent effect in the HBeXB. The results showed that substituents on the XB donor ring (R2) had a competing effect where electron donating groups strengthened the HB and weakened the XB. Therefore, selecting an appropriate substituent on the adjacent HB donor ring (R1) could be an alternative and effective way to enhance an electron-rich XB donor. X-ray crystallographic analysis demonstrated that intramolecular HBing plays an important role in the receptor adopting the bidentate conformation. Taken together, the findings imply that modifying distal substituents that affect neighboring noncovalent interactions can have a similar impact to conventional para substitution substituent effects.
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Affiliation(s)
- Jiyu Sun
- Department of Chemistry and Biochemistry, University of Montana, 32 Campus Drive Missoula MT 59812 USA
| | - Daniel A Decato
- Department of Chemistry and Biochemistry, University of Montana, 32 Campus Drive Missoula MT 59812 USA
| | | | - Eric A John
- Department of Chemistry and Biochemistry, University of Montana, 32 Campus Drive Missoula MT 59812 USA
| | - Orion B Berryman
- Department of Chemistry and Biochemistry, University of Montana, 32 Campus Drive Missoula MT 59812 USA
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2
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Docker A, Tse YC, Tay HM, Taylor AJ, Zhang Z, Beer PD. Anti-Hofmeister Anion Selectivity via a Mechanical Bond Effect in Neutral Halogen-Bonding [2]Rotaxanes. Angew Chem Int Ed Engl 2022; 61:e202214523. [PMID: 36264711 PMCID: PMC10100147 DOI: 10.1002/anie.202214523] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Indexed: 11/18/2022]
Abstract
Exceptionally strong halogen bonding (XB) donor-chloride interactions are exploited for the chloride anion template synthesis of neutral XB [2]rotaxane host systems which contain perfluoroaryl-functionalised axle components, including a remarkably potent novel 4,6-dinitro-1,3-bis-iodotriazole motif. Halide anion recognition properties in aqueous-organic media, determined via extensive 1 H NMR halide anion titration experiments, reveal the rotaxane host systems exhibit dramatically enhanced affinities for hydrophilic Cl- and Br- , but conversely diminished affinities for hydrophobic I- , relative to their non-interlocked axle counterparts. Crucially, this mechanical bond effect induces a binding selectivity which directly opposes Hofmeister bias. Free-energy analysis of this mechanical bond enhancement demonstrates anion recognition by neutral XB interlocked host systems as a rare and general strategy to engineer anti-Hofmeister bias anion selectivity in synthetic receptor design.
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Affiliation(s)
- Andrew Docker
- Department of ChemistryUniversity of OxfordChemistry Research Laboratory12 Mansfield RoadOxfordOX1 3TAUK
| | - Yuen Cheong Tse
- Department of ChemistryUniversity of OxfordChemistry Research Laboratory12 Mansfield RoadOxfordOX1 3TAUK
| | - Hui Min Tay
- Department of ChemistryUniversity of OxfordChemistry Research Laboratory12 Mansfield RoadOxfordOX1 3TAUK
| | - Andrew J. Taylor
- Department of ChemistryUniversity of OxfordChemistry Research Laboratory12 Mansfield RoadOxfordOX1 3TAUK
| | - Zongyao Zhang
- Department of ChemistryUniversity of OxfordChemistry Research Laboratory12 Mansfield RoadOxfordOX1 3TAUK
| | - Paul D. Beer
- Department of ChemistryUniversity of OxfordChemistry Research Laboratory12 Mansfield RoadOxfordOX1 3TAUK
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3
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Kelly AW, Holman KT. “Click”‐Like η
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‐Metalation/Demetalation of Aryl Iodides as a Means of Turning “ON/OFF” Halogen Bond Donor Functionality. Angew Chem Int Ed Engl 2022; 61:e202115556. [DOI: 10.1002/anie.202115556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Indexed: 11/10/2022]
Affiliation(s)
- Andrew W. Kelly
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057 USA
| | - K. Travis Holman
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057 USA
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4
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Kelly AW, Holman KT. “Click”‐Like η
6
‐Metalation/Demetalation of Aryl Iodides as a Means of Turning “ON/OFF” Halogen Bond Donor Functionality. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202115556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Andrew W. Kelly
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057 USA
| | - K. Travis Holman
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057 USA
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5
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Affiliation(s)
- Yunying Xu
- School of Chemistry and Chemical Engineering Shandong University Jinan 250100 P. R. China
| | - Aiyou Hao
- School of Chemistry and Chemical Engineering Shandong University Jinan 250100 P. R. China
| | - Pengyao Xing
- School of Chemistry and Chemical Engineering Shandong University Jinan 250100 P. R. China
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6
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Xu Y, Hao A, Xing P. X⋅⋅⋅X Halogen Bond-Induced Supramolecular Helices. Angew Chem Int Ed Engl 2021; 61:e202113786. [PMID: 34729878 DOI: 10.1002/anie.202113786] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Indexed: 12/28/2022]
Abstract
The halogen bond is the attractive interaction between the electrophilic region of a halogen atom and the nucleophilic region of another molecular entity, emerging as a favorable manner to manipulate supramolecular chirality in self-assemblies. Engineering halogen bonded helical structures remains a challenge due to its sensitivity to solvent polarity and competitive forces like hydrogen bonds. Herein, we report a X⋅⋅⋅X (X=Cl, Br, I) type weak halogen bond that induces the formation and evolution of supramolecular helical structures both in solid and solution state. The π-conjugated phenylalanine derivatives with F, Cl, Br and I substitution self-assembled into 21 helical packing driven by hydrogen bond and halogen bond, respectively. The specific molecular geometries of π-conjugated amino acids gave rise to multiple noncovalent forces to stabilize the X⋅⋅⋅X halogen bond with small bond energies ranging from -0.69 to -1.49 kcal mol-1 . Halogen bond induced an opposite helicity compared to the fluorinated species, accompanied by the inversed circularly polarized luminescence.
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Affiliation(s)
- Yunying Xu
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, P. R. China
| | - Aiyou Hao
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, P. R. China
| | - Pengyao Xing
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, P. R. China
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7
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Zhang W, Feng Y, Li B, Yang D, Hou L, Zhao W, Yang XJ, Wu B. Acid-Tolerant Sulfate Tetrahedral Cages from Anion-Coordination-Driven Assembly. Chemistry 2021; 28:e202103671. [PMID: 34687106 DOI: 10.1002/chem.202103671] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Indexed: 01/28/2023]
Abstract
Supramolecular cages have been constructed by anion-coordination-driven assembly (ACDA) in recent years and have shown unique host-guest interactions. However, most of the reported cages are made of the phosphate ion (PO4 3- ); other anions have rarely been explored. Here we show for the first time that the sulfate ion (SO4 2- ) is also able to form the A4 L4 tetrahedral motif with tris-bis(urea) ligands, but this is dependent on the stoichiometry of the sulfate ion (in solution). Notably, the sulfate cages display enhanced resistance for both Brønsted (pH as low as 4.3 in acetone containing 15 % water) and Lewis acids (metal complexes) compared to the corresponding phosphate cages, and thus could find applications where an acidic (proton or metals) environment is required.
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Affiliation(s)
- Wenyao Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China
| | - Yang Feng
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China
| | - Boyang Li
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China
| | - Dong Yang
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China
| | - Lekai Hou
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China
| | - Wei Zhao
- Key Laboratory of Medical Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing, 100081, P. R. China
| | - Xiao-Juan Yang
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China.,Key Laboratory of Medical Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing, 100081, P. R. China
| | - Biao Wu
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China.,Key Laboratory of Medical Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing, 100081, P. R. China
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8
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Jiao J, Dong J, Li Y, Cui Y. Fine‐Tuning of Chiral Microenvironments within Triple‐Stranded Helicates for Enhanced Enantioselectivity. Angew Chem Int Ed Engl 2021; 60:16568-16575. [DOI: 10.1002/anie.202104111] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Revised: 05/01/2021] [Indexed: 12/24/2022]
Affiliation(s)
- Jingjing Jiao
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
- The Key Laboratory of Resource Chemistry of Ministry of Education Shanghai Key Laboratory of Rare Earth Functional Materials Shanghai Normal University Shanghai 200234 China
| | - Jinqiao Dong
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
| | - Yingguo Li
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
| | - Yong Cui
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
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9
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Jiao J, Dong J, Li Y, Cui Y. Fine‐Tuning of Chiral Microenvironments within Triple‐Stranded Helicates for Enhanced Enantioselectivity. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202104111] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Jingjing Jiao
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
- The Key Laboratory of Resource Chemistry of Ministry of Education Shanghai Key Laboratory of Rare Earth Functional Materials Shanghai Normal University Shanghai 200234 China
| | - Jinqiao Dong
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
| | - Yingguo Li
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
| | - Yong Cui
- School of Chemistry and Chemical Technology Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites Shanghai Jiao Tong University Shanghai 200240 P. R. China
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10
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Seo SB, Lee S, Jeon HG, Jeong KS. Dramatic Enhancement of Binding Affinities Between Foldamer-Based Receptors and Anions by Intra-Receptor π-Stacking. Angew Chem Int Ed Engl 2020; 59:10441-10445. [PMID: 32157775 DOI: 10.1002/anie.202002657] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Indexed: 01/01/2023]
Abstract
As a synthetic model for intra-protein interactions that reinforce binding affinities between proteins and ligands, the energetic interplay of binding and folding was investigated using foldamer-based receptors capable of adopting helical structures. The receptors were designed to have identical hydrogen-bonding sites for anion binding but different aryl appendages that simply provide additional π-stacking within the helical backbones without direct interactions with the bound anions. In particular, the presence of electron-deficient aryl appendages led to dramatic enhancements in the association constant between the receptor and chloride or nitrate ions, by up to three orders of magnitude. Extended stacking within the receptor contributes to the stabilization of the entire folding structure of complexes, thereby enhancing binding affinities.
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Affiliation(s)
- Sung Beom Seo
- Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea
| | - Seungwon Lee
- Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea
| | - Hae-Geun Jeon
- Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea
| | - Kyu-Sung Jeong
- Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea
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11
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Haketa Y, Naganawa A, Sugiura S, Yasuda N, Maeda H. Anion-Responsive π-Electronic Systems Exhibiting Diverse Conformations and Stoichiometries in Anion Binding. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000464] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Yohei Haketa
- Department of Applied Chemistry; College of Life Sciences; Ritsumeikan University; Kusatsu 525-8577 Japan
| | - Atsushi Naganawa
- Department of Applied Chemistry; College of Life Sciences; Ritsumeikan University; Kusatsu 525-8577 Japan
| | - Shinya Sugiura
- Department of Applied Chemistry; College of Life Sciences; Ritsumeikan University; Kusatsu 525-8577 Japan
| | - Nobuhiro Yasuda
- Diffraction and Scattering Division; Japan Synchrotron Radiation Research Institute; Sayo 679-5198 Japan
| | - Hiromitsu Maeda
- Department of Applied Chemistry; College of Life Sciences; Ritsumeikan University; Kusatsu 525-8577 Japan
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12
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Seo SB, Lee S, Jeon H, Jeong K. Dramatic Enhancement of Binding Affinities Between Foldamer‐Based Receptors and Anions by Intra‐Receptor π‐Stacking. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202002657] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Sung Beom Seo
- Department of Chemistry Yonsei University Seoul 03722 Republic of Korea
| | - Seungwon Lee
- Department of Chemistry Yonsei University Seoul 03722 Republic of Korea
| | - Hae‐Geun Jeon
- Department of Chemistry Yonsei University Seoul 03722 Republic of Korea
| | - Kyu‐Sung Jeong
- Department of Chemistry Yonsei University Seoul 03722 Republic of Korea
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13
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Engelage E, Reinhard D, Huber SM. Is There a Single Ideal Parameter for Halogen-Bonding-Based Lewis Acidity? Chemistry 2020; 26:3843-3861. [PMID: 31943430 PMCID: PMC7154672 DOI: 10.1002/chem.201905273] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Indexed: 01/08/2023]
Abstract
Halogen-bond donors (halogen-based Lewis acids) have now found various applications in diverse fields of chemistry. The goal of this study was to identify a parameter obtainable from a single DFT calculation that reliably describes halogen-bonding strength (Lewis acidity). First, several DFT methods were benchmarked against the CCSD(T) CBS binding data of complexes of 17 carbon-based halogen-bond donors with chloride and ammonia as representative Lewis bases, which revealed M05-2X with a partially augmented def2-TZVP(D) basis set as the best model chemistry. The best single parameter to predict halogen-bonding strengths was the static σ-hole depth, but it still provided inaccurate predictions for a series of compounds. Thus, a more reliable parameter, Ωσ* , has been developed through the linear combination of the σ-hole depth and the σ*(C-I) energy, which was further validated against neutral, cationic, halogen- and nitrogen-based halogen-bond donors with very good performance.
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Affiliation(s)
- Elric Engelage
- Organische Chemie IFakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstraße 15044801BochumGermany
| | - Dominik Reinhard
- Organische Chemie IFakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstraße 15044801BochumGermany
| | - Stefan M. Huber
- Organische Chemie IFakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstraße 15044801BochumGermany
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14
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Vanderkooy A, Gupta AK, Földes T, Lindblad S, Orthaber A, Pápai I, Erdélyi M. Halogen Bonding Helicates Encompassing Iodonium Cations. Angew Chem Int Ed Engl 2019; 58:9012-9016. [PMID: 31074942 PMCID: PMC6773207 DOI: 10.1002/anie.201904817] [Citation(s) in RCA: 51] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Revised: 05/06/2019] [Indexed: 12/16/2022]
Abstract
The first halonium-ion-based helices were designed and synthesized using oligo-aryl/pyridylene-ethynylene backbones that fold around reactive iodonium ions. Halogen bonding interactions stabilize the iodonium ions within the helices. Remarkably, the distance between two iodonium ions within a helix is shorter than the sum of their van der Waals radii. The helical conformations were characterized by X-ray crystallography in the solid state, by NMR spectroscopy in solution and corroborated by DFT calculations. The helical complexes possess potential synthetic utility, as demonstrated by their ability to induce iodocyclization of 4-penten-1-ol.
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Affiliation(s)
- Alan Vanderkooy
- Department of Chemistry-BMC, Uppsala Universitet, Husargatan 3, 752 37, Uppsala, Sweden
| | - Arvind Kumar Gupta
- Department of Chemistry-Ångström Laboratory, Uppsala Universitet, Lägerhyddsvägen 1, 751 20, Uppsala, Sweden
| | - Tamás Földes
- Institute of Organic Chemistry, Research Center for Natural Sciences, Hungarian Academy of Sciences, Magyar tudósok körútja 2, 1117, Budapest, Hungary.,Present address: Department of Chemistry, King's College London, London, SE1 1DB, UK
| | - Sofia Lindblad
- Department of Chemistry-BMC, Uppsala Universitet, Husargatan 3, 752 37, Uppsala, Sweden
| | - Andreas Orthaber
- Department of Chemistry-Ångström Laboratory, Uppsala Universitet, Lägerhyddsvägen 1, 751 20, Uppsala, Sweden
| | - Imre Pápai
- Institute of Organic Chemistry, Research Center for Natural Sciences, Hungarian Academy of Sciences, Magyar tudósok körútja 2, 1117, Budapest, Hungary
| | - Máté Erdélyi
- Department of Chemistry-BMC, Uppsala Universitet, Husargatan 3, 752 37, Uppsala, Sweden
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15
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Vanderkooy A, Gupta AK, Földes T, Lindblad S, Orthaber A, Pápai I, Erdélyi M. Halogen Bonding Helicates Encompassing Iodonium Cations. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201904817] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Alan Vanderkooy
- Department of Chemistry—BMCUppsala Universitet Husargatan 3 752 37 Uppsala Sweden
| | - Arvind Kumar Gupta
- Department of Chemistry—Ångström LaboratoryUppsala Universitet Lägerhyddsvägen 1 751 20 Uppsala Sweden
| | - Tamás Földes
- Institute of Organic ChemistryResearch Center for Natural SciencesHungarian Academy of Sciences Magyar tudósok körútja 2 1117 Budapest Hungary
- Present address: Department of ChemistryKing's College London London SE1 1DB UK
| | - Sofia Lindblad
- Department of Chemistry—BMCUppsala Universitet Husargatan 3 752 37 Uppsala Sweden
| | - Andreas Orthaber
- Department of Chemistry—Ångström LaboratoryUppsala Universitet Lägerhyddsvägen 1 751 20 Uppsala Sweden
| | - Imre Pápai
- Institute of Organic ChemistryResearch Center for Natural SciencesHungarian Academy of Sciences Magyar tudósok körútja 2 1117 Budapest Hungary
| | - Máté Erdélyi
- Department of Chemistry—BMCUppsala Universitet Husargatan 3 752 37 Uppsala Sweden
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16
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Liu CZ, Koppireddi S, Wang H, Zhang DW, Li ZT. Halogen Bonding Directed Supramolecular Quadruple and Double Helices from Hydrogen-Bonded Arylamide Foldamers. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201811561] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Chuan-Zhi Liu
- Department of Chemistry; Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and; Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University; 2205 Songhu Road Shanghai 200438 China
| | - Satish Koppireddi
- Department of Chemistry; Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and; Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University; 2205 Songhu Road Shanghai 200438 China
| | - Hui Wang
- Department of Chemistry; Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and; Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University; 2205 Songhu Road Shanghai 200438 China
| | - Dan-Wei Zhang
- Department of Chemistry; Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and; Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University; 2205 Songhu Road Shanghai 200438 China
| | - Zhan-Ting Li
- Department of Chemistry; Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and; Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University; 2205 Songhu Road Shanghai 200438 China
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17
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Massena CJ, Decato DA, Berryman OB. A Long-Lived Halogen-Bonding Anion Triple Helicate Accommodates Rapid Guest Exchange. Angew Chem Int Ed Engl 2018; 57:16109-16113. [PMID: 30324741 PMCID: PMC6449053 DOI: 10.1002/anie.201810415] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2018] [Indexed: 12/16/2022]
Abstract
Anion-templated helical structures are emerging as a dynamic and tractable class of supramolecules that exhibit anion-switchable self-assembly. We present the first kinetic studies of an anion helicate by utilizing halogen-bonding m-arylene-ethynylene oligomers. These ligands formed high-fidelity triple helicates in solution with surprisingly long lifetimes on the order of seconds even at elevated temperatures. We propose an associative ligand-exchange mechanism that proceeded slowly on the same timescale. In contrast, intrachannel anion exchange occurred rapidly within milliseconds or faster as determined by stopped-flow visible spectroscopy. Additionally, the helicate accommodated bromide in solution and the solid state, while the thermodynamic stability of the triplex favored larger halide ions (bromide≈iodide≫chloride). Taken together, we elucidate a new class of kinetically stable helicates. These anion-switchable triplexes maintain their architectures while accommodating fast intrachannel guest exchange.
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Affiliation(s)
- Casey J. Massena
- Department of Chemistry and Biochemistry University of Montana 32 Campus Drive, Missoula, MT 59812 (MT)
| | - Daniel A. Decato
- Department of Chemistry and Biochemistry University of Montana 32 Campus Drive, Missoula, MT 59812 (MT)
| | - Orion B. Berryman
- Department of Chemistry and Biochemistry University of Montana 32 Campus Drive, Missoula, MT 59812 (MT)
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18
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Liu CZ, Koppireddi S, Wang H, Zhang DW, Li ZT. Halogen Bonding Directed Supramolecular Quadruple and Double Helices from Hydrogen-Bonded Arylamide Foldamers. Angew Chem Int Ed Engl 2018; 58:226-230. [PMID: 30426629 DOI: 10.1002/anie.201811561] [Citation(s) in RCA: 57] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2018] [Indexed: 02/06/2023]
Abstract
Halogen bonding has been used to glue together hydrogen-bonded short arylamide foldamers to achieve new supramolecular double and quadruple helices in the solid state. Three compounds, which bear a pyridine at one end and either a CF2 I or fluorinated iodobenzene group at the other end, engage in head-to-tail N⋅⋅⋅I halogen bonds to form one-component supramolecular P and M helices, which stack to afford supramolecular double-stranded helices. One of the double helices can dimerize to form a G-quadruplex-like supramolecular quadruple helix. Another symmetric compound, which bears a pyridine at each end, binds to ICF2 CF2 I through N⋅⋅⋅I halogen bonds to form two-component supramolecular P and M helices, with one turn consisting of four (2+2) molecules. Half of the pyridine-bearing molecules in two P helices and two M helices stack alternatingly to form another supramolecular quadruple helix. Another half of the pyridine-bearing molecules in such quadruple helices stack alternatingly with counterparts from neighboring quadruple helices, leading to unique quadruple helical arrays in two-dimensional space.
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Affiliation(s)
- Chuan-Zhi Liu
- Department of Chemistry, Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and, Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University, 2205 Songhu Road, Shanghai, 200438, China
| | - Satish Koppireddi
- Department of Chemistry, Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and, Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University, 2205 Songhu Road, Shanghai, 200438, China
| | - Hui Wang
- Department of Chemistry, Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and, Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University, 2205 Songhu Road, Shanghai, 200438, China
| | - Dan-Wei Zhang
- Department of Chemistry, Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and, Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University, 2205 Songhu Road, Shanghai, 200438, China
| | - Zhan-Ting Li
- Department of Chemistry, Shanghai Key Laboratory, of Molecular Catalysis and Innovative Materials, and, Collaborative Innovation Centre of Chemistry, for Energy Materials (iChEM) Fudan University, 2205 Songhu Road, Shanghai, 200438, China
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19
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Massena CJ, Decato DA, Berryman OB. A Long‐Lived Halogen‐Bonding Anion Triple Helicate Accommodates Rapid Guest Exchange. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201810415] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Casey J. Massena
- Department of Chemistry and Biochemistry University of Montana 32 Campus Drive Missoula MT 59812 USA
| | - Daniel A. Decato
- Department of Chemistry and Biochemistry University of Montana 32 Campus Drive Missoula MT 59812 USA
| | - Orion B. Berryman
- Department of Chemistry and Biochemistry University of Montana 32 Campus Drive Missoula MT 59812 USA
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20
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Tepper R, Schubert US. Halogenbrücken in Lösung: Anionenerkennung, Templat‐gestützte Selbstorganisation und Organokatalyse. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201707986] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Ronny Tepper
- Institut für Organische Chemie und Makromolekulare Chemie (IOMC) Friedrich-Schiller-Universität Jena Humboldtstraße 10 07743 Jena Deutschland
- Jena Center for Soft Matter (JCSM) Friedrich-Schiller-Universität Jena Philosophenweg 7 07743 Jena Deutschland
| | - Ulrich S. Schubert
- Institut für Organische Chemie und Makromolekulare Chemie (IOMC) Friedrich-Schiller-Universität Jena Humboldtstraße 10 07743 Jena Deutschland
- Jena Center for Soft Matter (JCSM) Friedrich-Schiller-Universität Jena Philosophenweg 7 07743 Jena Deutschland
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21
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Tepper R, Schubert US. Halogen Bonding in Solution: Anion Recognition, Templated Self-Assembly, and Organocatalysis. Angew Chem Int Ed Engl 2018; 57:6004-6016. [PMID: 29341377 DOI: 10.1002/anie.201707986] [Citation(s) in RCA: 181] [Impact Index Per Article: 30.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Revised: 12/14/2017] [Indexed: 12/21/2022]
Abstract
The halogen bond is a supramolecular interaction between a Lewis-acidic region of a covalently bound halogen and a Lewis base. It has been studied widely in silico and experimentally in the solid state; however, solution-phase applications have attracted enormous interest in the last few years. This Minireview highlights selected recent developments in halogen bond interactions in solution, with a focus on the use of receptors based on halogen bonds in anion recognition and sensing, anion-templated self-assembly, as well as in organocatalysis.
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Affiliation(s)
- Ronny Tepper
- Laboratory of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstrasse 10, 07743, Jena, Germany.,Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743, Jena, Germany
| | - Ulrich S Schubert
- Laboratory of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstrasse 10, 07743, Jena, Germany.,Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743, Jena, Germany
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22
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Ng CF, Chow HF, Mak TCW. Halogen-Bond-Mediated Assembly of a Single-Component Supramolecular Triangle and an Enantiomeric Pair of Double Helices from 2-(Iodoethynyl)pyridine Derivatives. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201800469] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Chun-Fai Ng
- Department of Chemistry and Center of Novel Functional Molecules; The Chinese University of Hong Kong; Shatin New Territories Hong Kong SAR P. R. China
| | - Hak-Fun Chow
- Department of Chemistry; Institute of Molecular Functional Materials, and Center of Novel Functional Molecules; The Chinese University of Hong Kong; Shatin New Territories Hong Kong SAR P. R. China
| | - Thomas C. W. Mak
- Department of Chemistry and Center of Novel Functional Molecules; The Chinese University of Hong Kong; Shatin New Territories Hong Kong SAR P. R. China
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23
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Ng CF, Chow HF, Mak TCW. Halogen-Bond-Mediated Assembly of a Single-Component Supramolecular Triangle and an Enantiomeric Pair of Double Helices from 2-(Iodoethynyl)pyridine Derivatives. Angew Chem Int Ed Engl 2018; 57:4986-4990. [DOI: 10.1002/anie.201800469] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Revised: 03/01/2018] [Indexed: 11/09/2022]
Affiliation(s)
- Chun-Fai Ng
- Department of Chemistry and Center of Novel Functional Molecules; The Chinese University of Hong Kong; Shatin New Territories Hong Kong SAR P. R. China
| | - Hak-Fun Chow
- Department of Chemistry; Institute of Molecular Functional Materials, and Center of Novel Functional Molecules; The Chinese University of Hong Kong; Shatin New Territories Hong Kong SAR P. R. China
| | - Thomas C. W. Mak
- Department of Chemistry and Center of Novel Functional Molecules; The Chinese University of Hong Kong; Shatin New Territories Hong Kong SAR P. R. China
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24
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Resa S, Miguel D, Guisán-Ceinos S, Mazzeo G, Choquesillo-Lazarte D, Abbate S, Crovetto L, Cárdenas DJ, Carreño MC, Ribagorda M, Longhi G, Mota AJ, Álvarez de Cienfuegos L, Cuerva JM. Sulfoxide-Induced Homochiral Folding of ortho
-Phenylene Ethynylenes (o
-OPEs) by Silver(I) Templating: Structure and Chiroptical Properties. Chemistry 2018; 24:2653-2662. [DOI: 10.1002/chem.201704897] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2017] [Indexed: 12/29/2022]
Affiliation(s)
- Sandra Resa
- Department of Organic Chemistry; University of Granada, UGR; C. U. Fuentenueva 18071 Granada Spain
| | - Delia Miguel
- Department of Physical Chemistry; University of Granada, UGR, Cartuja Campus; 18071 Granada Spain
| | - Santiago Guisán-Ceinos
- Department of Organic Chemistry; Universidad Autónoma de Madrid, Cantoblanco; 28049 Madrid Spain
| | - Giuseppe Mazzeo
- Dipartimento di Medicina e Traslazionale; Università di Brescia; Viale Europa 11 25123 Brescia Italy
| | - Duane Choquesillo-Lazarte
- Laboratorio de Estudios Cristalográficos; Instituto Andaluz de Ciencias de la Tierra, CSIC-UGR; Armilla, Granada Spain
| | - Sergio Abbate
- Dipartimento di Medicina e Traslazionale; Università di Brescia; Viale Europa 11 25123 Brescia Italy
| | - Luis Crovetto
- Department of Physical Chemistry; University of Granada, UGR, Cartuja Campus; 18071 Granada Spain
| | - Diego J. Cárdenas
- Department of Organic Chemistry; Universidad Autónoma de Madrid, Cantoblanco; 28049 Madrid Spain
| | - M. Carmen Carreño
- Department of Organic Chemistry; Universidad Autónoma de Madrid, Cantoblanco; 28049 Madrid Spain
| | - María Ribagorda
- Department of Organic Chemistry; Universidad Autónoma de Madrid, Cantoblanco; 28049 Madrid Spain
| | - Giovanna Longhi
- Dipartimento di Medicina e Traslazionale; Università di Brescia; Viale Europa 11 25123 Brescia Italy
| | - Antonio J. Mota
- Department of Inorganic Chemistry; University of Granada, UGR; C. U. Fuentenueva 18071 Granada Spain
| | | | - Juan M. Cuerva
- Department of Organic Chemistry; University of Granada, UGR; C. U. Fuentenueva 18071 Granada Spain
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25
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Dumele O, Schreib B, Warzok U, Trapp N, Schalley CA, Diederich F. Halogen-Bonded Supramolecular Capsules in the Solid State, in Solution, and in the Gas Phase. Angew Chem Int Ed Engl 2016; 56:1152-1157. [DOI: 10.1002/anie.201610884] [Citation(s) in RCA: 87] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Indexed: 12/26/2022]
Affiliation(s)
- Oliver Dumele
- Laboratorium für Organische Chemie; ETH Zurich; Vladimir-Prelog-Weg 3 8093 Zurich Switzerland
- Department of Chemistry; Northwestern University; 2145 Sheridan Rd Evanston IL 60208 USA
| | - Benedikt Schreib
- Laboratorium für Organische Chemie; ETH Zurich; Vladimir-Prelog-Weg 3 8093 Zurich Switzerland
| | - Ulrike Warzok
- Institut für Chemie und Biochemie der; Freien Universität; Takustrasse 3 14195 Berlin Germany
| | - Nils Trapp
- Laboratorium für Organische Chemie; ETH Zurich; Vladimir-Prelog-Weg 3 8093 Zurich Switzerland
| | - Christoph A. Schalley
- Institut für Chemie und Biochemie der; Freien Universität; Takustrasse 3 14195 Berlin Germany
| | - François Diederich
- Laboratorium für Organische Chemie; ETH Zurich; Vladimir-Prelog-Weg 3 8093 Zurich Switzerland
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26
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Dumele O, Schreib B, Warzok U, Trapp N, Schalley CA, Diederich F. Halogenverbrückte supramolekulare Kapseln im Festkörper, in Lösung und in der Gasphase. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201610884] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Oliver Dumele
- Laboratorium für Organische Chemie; ETH Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Schweiz
- Department of Chemistry; Northwestern University; 2145 Sheridan Rd Evanston IL 60208 USA
| | - Benedikt Schreib
- Laboratorium für Organische Chemie; ETH Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Schweiz
| | - Ulrike Warzok
- Institut für Chemie und Biochemie; Freie Universität Berlin; Takustraße 3 14195 Berlin Deutschland
| | - Nils Trapp
- Laboratorium für Organische Chemie; ETH Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Schweiz
| | - Christoph A. Schalley
- Institut für Chemie und Biochemie; Freie Universität Berlin; Takustraße 3 14195 Berlin Deutschland
| | - François Diederich
- Laboratorium für Organische Chemie; ETH Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Schweiz
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