1
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Ahsan A, Wang X, Sk R, Heydari M, Buimaga-Iarinca L, Wäckerlin C, Lucenti E, Decurtins S, Cariati E, Jung TA, Aschauer U, Liu SX. Self-Assembly of N-Rich Triimidazoles on Ag(111): Mixing the Pleasures and Pains of Epitaxy and Strain. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2023; 127:23000-23009. [PMID: 38053624 PMCID: PMC10694807 DOI: 10.1021/acs.jpcc.3c03325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Revised: 09/22/2023] [Indexed: 12/07/2023]
Abstract
In the present report, homochiral hydrogen-bonded assemblies of heavily N-doped (C9H6N6) heterocyclic triimidazole (TT) molecules on an Ag(111) substrate were investigated using scanning tunneling microscopy (STM) and low energy electron diffraction (LEED) techniques. The planar and prochiral TT molecules, which exhibit a threefold rotation symmetry and lack mirror symmetry when assembled on the substrate, carry multiple hydrogen-bonding donor and acceptor functionalities, inevitably leading to the formation of hexameric two-dimensionally extended assemblies that can be either homo- (RR/SS) or heterochiral (RS). Experimental STM data showing well-ordered homochiral domains and experimental LEED data are consistent with simulations assuming the R19.1° overlayer on the Ag(111) lattice. Importantly, we report the unexpected coincidence of spontaneous resolution with the condensation of neighboring islands in adjacent "Janus pairs". The islands are connected by a characteristic fault zone, an observation that we discuss in the context of the fairly symmetric molecule and its propensity to compromise and benefit from interisland bonding at the expense of lattice mismatches and strain in the defect zone. We relate this to the close to triangular shape and the substantial but weak bonding scheme beyond van der Waals (vdW) of the TT molecules, which is due to the three N-containing five-membered imidazole rings. Density functional theory (DFT) calculations show clear energetic differences between homochiral and heterochiral pairwise interactions, clearly supporting the experimental results.
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Affiliation(s)
- Aisha Ahsan
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Xing Wang
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| | - Rejaul Sk
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Mehdi Heydari
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Luiza Buimaga-Iarinca
- National
Institute for Research and Development of Isotopic and Molecular Technologies
(INCDTIM), Donat Str., Cluj-Napoca 67-103, Romania
| | - Christian Wäckerlin
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Institute
of Physics, École Polytechnique Fédérale de Lausanne Station 3, Lausanne 1015, Switzerland
| | - Elena Lucenti
- Institute
of Chemical Sciences and Technologies “Giulio Natta”
(SCITEC) of CNR, via Golgi 19, Milano 20133, Italy
| | - Silvio Decurtins
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| | - Elena Cariati
- Institute
of Chemical Sciences and Technologies “Giulio Natta”
(SCITEC) of CNR, via Golgi 19, Milano 20133, Italy
- Department
of Chemistry, Università degli Studi di Milano and INSTM RU Via Golgi 19, Milano 20133, Italy
| | - Thomas A. Jung
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Ulrich Aschauer
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
- Department
of Chemistry and Physics of Materials, University
of Salzburg, Jakob-Haringer-Str. 2A, Salzburg 5020, Austria
| | - Shi-Xia Liu
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
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2
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Kawai S, Sugawara K, Ma Y, Sun K, Custance O, Ishigaki Y, Suzuki T. Multiple Molecular Interactions between Alkyl Groups and Dissociated Bromine Atoms on Ag(111). Phys Chem Chem Phys 2022; 24:22191-22197. [DOI: 10.1039/d2cp03198a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Multiple intermolecular interactions offer a high-degree of controllability of on-surface molecular assemblies. Here, two kinds of molecular networks were formed by depositing 11,11,12,12-tetrabromo-1,4,5,8-tetraaza-9,10-anthraquinodimethane derivatives with two different alkyl groups in...
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3
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Rodríguez LM, Gómez P, Más-Montoya M, Abad J, Tárraga A, Cerdá JI, Méndez J, Curiel D. Synthesis and Two-Dimensional Chiral Surface Self-Assembly of a π-Conjugated System with Three-Fold Symmetry: Benzotri(7-Azaindole). Angew Chem Int Ed Engl 2021; 60:1782-1788. [PMID: 33146444 DOI: 10.1002/anie.202012100] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Indexed: 11/06/2022]
Abstract
The synthesis of a novel expanded π-conjugated system, namely benzotri(7-azaindole), BTAI, is reported. Its C3h symmetry along with the integration of six complementary donor and acceptor N-H⋅⋅⋅N hydrogen bonds in the conjugated structure promote the 2D self-assembly on Au(111) over extended areas. Besides, a perfect commensurability with the gold lattice endows the physisorbed molecular film with a remarkable stability. The structural features of BTAI result in two levels of surface chirality: Firstly, the molecules become chiral upon adsorption on the surface. Then, due to the favorable N-H⋅⋅⋅N hydrogen bond-directed self-assembly, along with the relative molecular rotation with respect to the substrate, supramolecular chirality manifests in two mirror enantiomorphous domains. Thus, the system undergoes spontaneous chiral resolution. LEED and STM assisted by theoretical simulations have been employed to characterize in detail these novel 2D conglomerates with relevant chiral properties for systems with C3h symmetry.
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Affiliation(s)
- Luis M Rodríguez
- Department of Surfaces and Coatings, Institute of Material Science of Madrid (ICMM-CSIC), Sor Juana Inés de la Cruz 3, 28049-, Madrid, Spain
| | - Paula Gómez
- Department of Organic Chemistry, University of Murcia, Campus of Espinardo, 30100-, Murcia, Spain
| | - Miriam Más-Montoya
- Department of Organic Chemistry, University of Murcia, Campus of Espinardo, 30100-, Murcia, Spain
| | - José Abad
- Department of Applied Physics and Naval Technology, Technical University of Cartagena, Campus Muralla del Mar, 30203-, Cartagena, Spain
| | - Alberto Tárraga
- Department of Organic Chemistry, University of Murcia, Campus of Espinardo, 30100-, Murcia, Spain
| | - Jorge I Cerdá
- Department of Interfaces and Nanostructures, Institute of Material Science of Madrid (ICMM-CSIC), Sor Juana Inés de la Cruz 3, 28049-, Madrid, Spain
| | - Javier Méndez
- Department of Surfaces and Coatings, Institute of Material Science of Madrid (ICMM-CSIC), Sor Juana Inés de la Cruz 3, 28049-, Madrid, Spain
| | - David Curiel
- Department of Organic Chemistry, University of Murcia, Campus of Espinardo, 30100-, Murcia, Spain
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4
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Synthesis and Two‐Dimensional Chiral Surface Self‐Assembly of a π‐Conjugated System with Three‐Fold Symmetry: Benzotri(7‐Azaindole). Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202012100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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5
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Adhikari R, Siglreithmaier G, Gurrath M, Meusel M, Kuliga J, Lepper M, Hölzel H, Jux N, Meyer B, Steinrück H, Marbach H. Formation of Highly Ordered Molecular Porous 2D Networks from Cyano-Functionalized Porphyrins on Cu(111). Chemistry 2020; 26:13408-13418. [PMID: 32573877 PMCID: PMC7692896 DOI: 10.1002/chem.202001980] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Indexed: 12/04/2022]
Abstract
We investigated the adsorption of three related cyano-functionalized tetraphenyl porphyrin derivatives on Cu(111) by scanning tunneling microscopy (STM) in ultra-high vacuum (UHV) with the goal to identify the role of the cyano group and the central Cu atom for the intermolecular and supramolecular arrangement. The porphyrin derivatives studied were Cu-TCNPP, Cu-cisDCNPP, and 2H-cisDCNPP, that is, Cu-5,10,15,20-tetrakis-(p-cyano)-phenylporphyrin, Cu-meso-cis-di(p-cyano)-phenylporphyrin and 2H-meso-cis-di(p-cyano)-phenylporphyrin, respectively. Starting from different structures obtained after deposition at room temperature, all three molecules form the same long-range ordered hexagonal honeycomb-type structure with triangular pores and three molecules per unit cell. For the metal-free 2H-cisDCNPP, this occurs only after self-metalation upon heating. The structure-forming elements are pores with a distance of 3.1 nm, formed by triangles of porphyrins fused together by cyano-Cu-cyano interactions with Cu adatoms. This finding leads us to suggest that two cyano-phenyl groups in the "cis" position is the minimum prerequisite to form a highly ordered 2D porous molecular pattern. The experimental findings are supported by detailed density functional theory calculations to analyze the driving forces that lead to the formation of the porous hexagonal honeycomb-type structure.
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Affiliation(s)
- Rajan Adhikari
- Lehrstuhl für Physikalische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Gretel Siglreithmaier
- Lehrstuhl für Physikalische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Martin Gurrath
- Interdisciplinary Center for Molecular Materials (ICMM) anComputer-Chemistry-Center (CCC)Friedrich-Alexander-Universität Erlangen-NürnbergNägelsbachstr. 2591052ErlangenGermany
| | - Manuel Meusel
- Lehrstuhl für Physikalische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Jan Kuliga
- Lehrstuhl für Physikalische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Michael Lepper
- Lehrstuhl für Physikalische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Helen Hölzel
- Lehrstuhl für Organische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergNikolaus-Fiebiger-Str. 1091058ErlangenGermany
| | - Norbert Jux
- Lehrstuhl für Organische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergNikolaus-Fiebiger-Str. 1091058ErlangenGermany
| | - Bernd Meyer
- Interdisciplinary Center for Molecular Materials (ICMM) anComputer-Chemistry-Center (CCC)Friedrich-Alexander-Universität Erlangen-NürnbergNägelsbachstr. 2591052ErlangenGermany
| | - Hans‐Peter Steinrück
- Lehrstuhl für Physikalische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Hubertus Marbach
- Lehrstuhl für Physikalische Chemie IIFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
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6
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Berrocal JA, Heideman GH, de Waal BFM, Enache M, Havenith RWA, Stöhr M, Meijer EW, Feringa BL. Engineering Long-Range Order in Supramolecular Assemblies on Surfaces: The Paramount Role of Internal Double Bonds in Discrete Long-Chain Naphthalenediimides. J Am Chem Soc 2020; 142:4070-4078. [PMID: 31971383 PMCID: PMC7047225 DOI: 10.1021/jacs.0c00765] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
![]()
Achieving
long-range order with surface-supported supramolecular
assemblies is one of the pressing challenges in the prospering field
of non-covalent surface functionalization. Having access to defect-free
on-surface molecular assemblies will pave the way for various nanotechnology
applications. Here we report the synthesis of two libraries of naphthalenediimides
(NDIs) symmetrically functionalized with long aliphatic chains (C28 and C33) and their self-assembly at the 1-phenyloctane/highly
oriented pyrolytic graphite (1-PO/HOPG) interface. The two NDI libraries
differ by the presence/absence of an internal double bond in each
aliphatic chain (unsaturated and saturated compounds, respectively).
All molecules assemble into lamellar arrangements, with the NDI cores
lying flat and forming 1D rows on the surface, while the carbon chains
separate the 1D rows from each other. Importantly, the presence of
the unsaturation plays a dominant role in the arrangement of the aliphatic
chains, as it exclusively favors interdigitation. The fully saturated
tails, instead, self-assemble into a combination of either interdigitated
or non-interdigitated diagonal arrangements. This difference in packing
is spectacularly amplified at the whole surface level and results
in almost defect-free self-assembled monolayers for the unsaturated
compounds. In contrast, the monolayers of the saturated counterparts
are globally disordered, even though they locally preserve the lamellar arrangements. The experimental
observations are supported by computational studies and are rationalized
in terms of stronger van der Waals interactions in the case of the
unsaturated compounds. Our investigation reveals the paramount role
played by internal double bonds on the self-assembly of discrete large
molecules at the liquid/solid interface.
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Affiliation(s)
- José Augusto Berrocal
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.,Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry , Eindhoven University of Technology , 5600 MB Eindhoven , The Netherlands
| | - G Henrieke Heideman
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
| | - Bas F M de Waal
- Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry , Eindhoven University of Technology , 5600 MB Eindhoven , The Netherlands
| | - Mihaela Enache
- Zernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
| | - Remco W A Havenith
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.,Zernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.,Department of Inorganic and Physical Chemistry , Ghent University , Krijgslaan 281 (S3) , B-9000 Gent , Belgium
| | - Meike Stöhr
- Zernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
| | - E W Meijer
- Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry , Eindhoven University of Technology , 5600 MB Eindhoven , The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.,Zernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
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7
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Müller K, Schmidt N, Link S, Riedel R, Bock J, Malone W, Lasri K, Kara A, Starke U, Kivala M, Stöhr M. Triphenylene-Derived Electron Acceptors and Donors on Ag(111): Formation of Intermolecular Charge-Transfer Complexes with Common Unoccupied Molecular States. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2019; 15:e1901741. [PMID: 31264784 DOI: 10.1002/smll.201901741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2019] [Revised: 06/14/2019] [Indexed: 06/09/2023]
Abstract
Over the past years, ultrathin films consisting of electron donating and accepting molecules have attracted increasing attention due to their potential usage in optoelectronic devices. Key parameters for understanding and tuning their performance are intermolecular and molecule-substrate interactions. Here, the formation of a monolayer thick blend of triphenylene-based organic donor and acceptor molecules from 2,3,6,7,10,11-hexamethoxytriphenylene (HAT) and 1,4,5,8,9,12-hexaazatriphenylenehexacarbonitrile (HATCN), respectively, on a silver (111) surface is reported. Scanning tunneling microscopy and spectroscopy, valence and core level photoelectron spectroscopy, as well as low-energy electron diffraction measurements are used, complemented by density functional theory calculations, to investigate both the electronic and structural properties of the homomolecular as well as the intermixed layers. The donor molecules are weakly interacting with the Ag(111) surface, while the acceptor molecules show a strong interaction with the substrate leading to charge transfer and substantial buckling of the top silver layer and of the adsorbates. Upon mixing acceptor and donor molecules, strong hybridization occurs between the two different molecules leading to the emergence of a common unoccupied molecular orbital located at both the donor and acceptor molecules. The donor acceptor blend studied here is, therefore, a compelling candidate for organic electronics based on self-assembled charge-transfer complexes.
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Affiliation(s)
- Kathrin Müller
- Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, Netherlands
- Max Planck Institute for Solid State Research, Heisenbergstrasse 1, D-70569, Stuttgart, Germany
| | - Nico Schmidt
- Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, Netherlands
| | - Stefan Link
- Max Planck Institute for Solid State Research, Heisenbergstrasse 1, D-70569, Stuttgart, Germany
| | - René Riedel
- Department of Chemistry and Pharmacy, University of Erlangen-Nürnberg, Nikolaus-Fiebiger-Strasse 10, D-91058, Erlangen, Germany
| | - Julian Bock
- Organisch-Chemisches Institut & Centre for Advanced Materials, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270 & 225, 69120, Heidelberg, Germany
| | - Walter Malone
- Department of Physics, University of Central Florida, Orlando, FL 32816, USA
| | - Karima Lasri
- Department of Physics, University of Central Florida, Orlando, FL 32816, USA
| | - Abdelkader Kara
- Department of Physics, University of Central Florida, Orlando, FL 32816, USA
| | - Ulrich Starke
- Max Planck Institute for Solid State Research, Heisenbergstrasse 1, D-70569, Stuttgart, Germany
| | - Milan Kivala
- Organisch-Chemisches Institut & Centre for Advanced Materials, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270 & 225, 69120, Heidelberg, Germany
| | - Meike Stöhr
- Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, Netherlands
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8
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Schmidt N, Enache M, Maggini L, Havenith RW, Bonifazi D, Stöhr M. Coverage-Controlled Polymorphism of H-Bonded Networks on Au(111). THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2019; 123:7151-7157. [PMID: 30949275 PMCID: PMC6443212 DOI: 10.1021/acs.jpcc.8b12260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Revised: 03/01/2019] [Indexed: 06/09/2023]
Abstract
We report on the self-assembly of a conformational flexible organic compound on Au(111) using scanning tunneling microscopy and low-energy electron diffraction measurements. We observed different conformers of the compound upon adsorption on the reconstructed Au(111) surface. Increasing the molecular coverage enhanced the lateral pressure, that is, parallel to the surface, favoring a coverage-controlled transition from a supramolecular network displaying only one molecular organization, into a polymorphic array with two coexisting arrangements. Our results give insights into the role of substrate-induced conformational changes on the formation of polymorphic supramolecular networks.
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Affiliation(s)
- Nico Schmidt
- Zernike
Institute for Advanced Materials and Stratingh Institute for Chemistry, University of Groningen, Groningen 9747 AG, The Netherlands
| | - Mihaela Enache
- Zernike
Institute for Advanced Materials and Stratingh Institute for Chemistry, University of Groningen, Groningen 9747 AG, The Netherlands
| | - Laura Maggini
- Namur
Research College (NARC), University of Namur
(UNamur), Rue de Bruxelles
61, 5000 Namur, Belgium
| | - Remco W.A. Havenith
- Zernike
Institute for Advanced Materials and Stratingh Institute for Chemistry, University of Groningen, Groningen 9747 AG, The Netherlands
- Ghent
Quantum Chemistry Group, University of Ghent, Gent 9000, Belgium
| | - Davide Bonifazi
- Namur
Research College (NARC), University of Namur
(UNamur), Rue de Bruxelles
61, 5000 Namur, Belgium
- School
of Chemistry, Cardiff University, Park Place, Cardiff CF10 3AT, U.K.
| | - Meike Stöhr
- Zernike
Institute for Advanced Materials and Stratingh Institute for Chemistry, University of Groningen, Groningen 9747 AG, The Netherlands
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9
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Gopi A, Sajitha M, Haridas R, Varghese L, Yoosaf K. Cooperative and FRET-Assisted Brightness Enhancement in Oligo(phenylene ethynylene): Quantum Dot Organic-Inorganic Nanohybrids. Chem Asian J 2018; 13:1492-1499. [PMID: 29573188 DOI: 10.1002/asia.201800328] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2018] [Indexed: 12/27/2022]
Abstract
Herein, we combine the ideas of concerted emission from fluorophore ensembles and its further amplification through FRET in an organic-inorganic hybrid approach. Spherical and highly fluorescent organic nanoparticles (FONPs, Φf =0.38), prepared by the self-assembly of oligo(phenylene ethynylene) (OPE) molecules, were selected as a potential donor material. This organic core was then decorated with a shell of fluorescent CdSe/ZnS core-shell quantum dots (QDs; <d>≅5.5 nm, Φf =0.27) with the aid of a bifunctional ligand, mercaptopropionic acid. Its high extinction coefficient (ϵ≈4.1×105 m-1 cm-1 ) and good spectral match with the emission of the FONPs (J(λ)≈4.08×1016 m-1 cm-1 nm4 ) made them a better acceptor candidate to constitute an efficient FRET pair (ΦFRET =0.8). As a result, the QD fluorescence intensity was enhanced by more than twofold. The fundamental calculations carried out indicated an improvement in all the FRET parameters as the number of QDs around the FONPs was increased. This, together with the localization of multiple QDs in a nanometric dimension (volume≈1.8×106 nm3 ), gave highly bright reddish luminescent hybrid particles as visualized under a fluorescence microscope.
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Affiliation(s)
- Arun Gopi
- Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695019, Kerala, India.,Academy of Scientific and Innovative Research (AcSIR), CSIR-NIIST Campus, Thiruvananthapuram, 695019, Kerala, India
| | - Manikantan Sajitha
- Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695019, Kerala, India.,Academy of Scientific and Innovative Research (AcSIR), CSIR-NIIST Campus, Thiruvananthapuram, 695019, Kerala, India
| | - Reethu Haridas
- Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695019, Kerala, India.,Academy of Scientific and Innovative Research (AcSIR), CSIR-NIIST Campus, Thiruvananthapuram, 695019, Kerala, India
| | - Listo Varghese
- Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695019, Kerala, India
| | - Karuvath Yoosaf
- Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695019, Kerala, India.,Academy of Scientific and Innovative Research (AcSIR), CSIR-NIIST Campus, Thiruvananthapuram, 695019, Kerala, India
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10
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Szekrényes Z, Nagy PR, Tarczay G, Maggini L, Bonifazi D, Kamarás K. Direction-dependent secondary bonds and their stepwise melting in a uracil-based molecular crystal studied by infrared spectroscopy and theoretical modeling. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2017.11.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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11
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Vulcano R, Pengo P, Velari S, Wouters J, De Vita A, Tecilla P, Bonifazi D. Toward Fractioning of Isomers through Binding-Induced Acceleration of Azobenzene Switching. J Am Chem Soc 2017; 139:18271-18280. [PMID: 29064236 DOI: 10.1021/jacs.7b09568] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
The E/Z isomerization process of a uracil-azobenzene derivative in which the nucleobase is conjugated to a phenyldiazene tail is studied in view of its ability to form triply H-bonded complexes with a suitably complementary 2,6-diacetylamino-4-pyridine ligand. UV-vis and 1H NMR investigations of the photochemical and thermal isomerization kinetics show that the thermal Z → E interconversion is 4-fold accelerated upon formation of the H-bonded complex. DFT calculations show that the formation of triple H-bonds triggers a significant elongation of the N═N double bond, caused by an increase of its πg* antibonding character. This results in a reduction of the N═N torsional barrier and thus in accelerated thermal Z → E isomerization. Combined with light-controlled E → Z isomerization, this enables controllable fractional tuning of the two configurational isomers.
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Affiliation(s)
- Rosaria Vulcano
- Department of Chemistry, University of Namur (UNamur) , Rue de Bruxelles 61, Namur, 5000, Belgium
| | | | | | - Johan Wouters
- Department of Chemistry, University of Namur (UNamur) , Rue de Bruxelles 61, Namur, 5000, Belgium
| | - Alessandro De Vita
- Department of Physics, King's College London , Strand, London WC2R 2LS, United Kingdom
| | | | - Davide Bonifazi
- Department of Chemistry, University of Namur (UNamur) , Rue de Bruxelles 61, Namur, 5000, Belgium.,School of Chemistry, Cardiff University , Main Building, Park Place, Cardiff CF10 3AT, United Kingdom
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12
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Bouju X, Mattioli C, Franc G, Pujol A, Gourdon A. Bicomponent Supramolecular Architectures at the Vacuum–Solid Interface. Chem Rev 2017; 117:1407-1444. [DOI: 10.1021/acs.chemrev.6b00389] [Citation(s) in RCA: 78] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Xavier Bouju
- CEMES-CNRS, 29 Rue J. Marvig, 31055 Toulouse, France
| | | | - Grégory Franc
- CEMES-CNRS, 29 Rue J. Marvig, 31055 Toulouse, France
| | - Adeline Pujol
- Université de Toulouse, UPS, CNRS, CEMES, 118 route de Narbonne, 31062 Toulouse, France
| | - André Gourdon
- CEMES-CNRS, 29 Rue J. Marvig, 31055 Toulouse, France
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13
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A tight 1:1 complex between an allosteric receptor and an organic effector with hydrogen and coordination bonds. Tetrahedron Lett 2016. [DOI: 10.1016/j.tetlet.2016.07.088] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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14
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Müller K, Enache M, Stöhr M. Confinement properties of 2D porous molecular networks on metal surfaces. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2016; 28:153003. [PMID: 26982214 DOI: 10.1088/0953-8984/28/15/153003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Quantum effects that arise from confinement of electronic states have been extensively studied for the surface states of noble metals. Utilizing small artificial structures for confinement allows tailoring of the surface properties and offers unique opportunities for applications. So far, examples of surface state confinement include thin films, artificial nanoscale structures, vacancy and adatom islands, self-assembled 1D chains, vicinal surfaces, quantum dots and quantum corrals. In this review we summarize recent achievements in changing the electronic structure of surfaces by adsorption of nanoporous networks whose design principles are based on the concepts of supramolecular chemistry. Already in 1993, it was shown that quantum corrals made from Fe atoms on a Cu(1 1 1) surface using single atom manipulation with a scanning tunnelling microscope confine the Shockley surface state. However, since the atom manipulation technique for the construction of corral structures is a relatively time consuming process, the fabrication of periodic two-dimensional (2D) corral structures is practically impossible. On the other side, by using molecular self-assembly extended 2D porous structures can be achieved in a parallel process, i.e. all pores are formed at the same time. The molecular building blocks are usually held together by non-covalent interactions like hydrogen bonding, metal coordination or dipolar coupling. Due to the reversibility of the bond formation defect-free and long-range ordered networks can be achieved. However, recently also examples of porous networks formed by covalent coupling on the surface have been reported. By the choice of the molecular building blocks, the dimensions of the network (pore size and pore to pore distance) can be controlled. In this way, the confinement properties of the individual pores can be tuned. In addition, the effect of the confined state on the hosting properties of the pores will be discussed in this review article.
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Affiliation(s)
- Kathrin Müller
- Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands. Max Planck Institute for Solid State Research, Heisenbergstr. 1, 70569 Stuttgart, Germany
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15
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Müller K, Moreno-López JC, Gottardi S, Meinhardt U, Yildirim H, Kara A, Kivala M, Stöhr M. Cyano-Functionalized Triarylamines on Coinage Metal Surfaces: Interplay of Intermolecular and Molecule-Substrate Interactions. Chemistry 2015; 22:581-9. [PMID: 26636437 DOI: 10.1002/chem.201503205] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2015] [Indexed: 11/09/2022]
Abstract
The self-assembly of cyano-functionalized triarylamine derivatives on Cu(111), Ag(111) and Au(111) was studied by means of scanning tunnelling microscopy, low-energy electron diffraction, X-ray photoelectron spectroscopy and density functional theory calculations. Different bonding motifs, such as antiparallel dipolar coupling, hydrogen bonding and metal coordination, were observed. Whereas on Ag(111) only one hexagonally close-packed pattern stabilized by hydrogen bonding is observed, on Au(111) two different partially porous phases are present at submonolayer coverage, stabilized by dipolar coupling, hydrogen bonding and metal coordination. In contrast to the self-assembly on Ag(111) and Au(111), for which large islands are formed, on Cu(111), only small patches of hexagonally close-packed networks stabilized by metal coordination and areas of disordered molecules are found. The significant variety in the molecular self-assembly of the cyano-functionalized triarylamine derivatives on these coinage metal surfaces is explained by differences in molecular mobility and the subtle interplay between intermolecular and molecule-substrate interactions.
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Affiliation(s)
- Kathrin Müller
- Zernike Institute for Advanced Materials, Nijenborgh 4, 9747AG Groningen (The Netherlands), Fax: (+31) 503637208. .,Current Address: Max Planck Institute for Solid State Research, Heisenbergstrasse 1, 70569 Stuttgart (Germany).
| | - Juan Carlos Moreno-López
- Zernike Institute for Advanced Materials, Nijenborgh 4, 9747AG Groningen (The Netherlands), Fax: (+31) 503637208
| | - Stefano Gottardi
- Zernike Institute for Advanced Materials, Nijenborgh 4, 9747AG Groningen (The Netherlands), Fax: (+31) 503637208
| | - Ute Meinhardt
- Chair of Organic Chemistry 1, Department of Chemistry and Pharmacy, University of Erlangen-Nürnberg, Henkestrasse 42, 91054 Erlangen (Germany), Fax: (+49) 9131-8526865
| | - Handan Yildirim
- Department of Physics, University of Central Florida, Orlando, Florida 32816 (USA)
| | - Abdelkader Kara
- Department of Physics, University of Central Florida, Orlando, Florida 32816 (USA)
| | - Milan Kivala
- Chair of Organic Chemistry 1, Department of Chemistry and Pharmacy, University of Erlangen-Nürnberg, Henkestrasse 42, 91054 Erlangen (Germany), Fax: (+49) 9131-8526865.
| | - Meike Stöhr
- Zernike Institute for Advanced Materials, Nijenborgh 4, 9747AG Groningen (The Netherlands), Fax: (+31) 503637208.
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16
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Bilbao N, Destoop I, De Feyter S, González-Rodríguez D. Two-Dimensional Nanoporous Networks Formed by Liquid-to-Solid Transfer of Hydrogen-Bonded Macrocycles Built from DNA Bases. Angew Chem Int Ed Engl 2015; 55:659-63. [DOI: 10.1002/anie.201509233] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2015] [Indexed: 11/08/2022]
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17
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Bilbao N, Destoop I, De Feyter S, González-Rodríguez D. Two-Dimensional Nanoporous Networks Formed by Liquid-to-Solid Transfer of Hydrogen-Bonded Macrocycles Built from DNA Bases. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201509233] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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18
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Goujon A, Du G, Moulin E, Fuks G, Maaloum M, Buhler E, Giuseppone N. Hierarchical Self-Assembly of Supramolecular Muscle-Like Fibers. Angew Chem Int Ed Engl 2015; 55:703-7. [PMID: 26582752 DOI: 10.1002/anie.201509813] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2015] [Indexed: 01/09/2023]
Abstract
An acid-base switchable [c2]daisy chain rotaxane terminated with two 2,6-diacetylamino pyridine units has been self-assembled with a bis(uracil) linker. The complementary hydrogen-bond recognition patterns, together with lateral van der Waals aggregations, result in the hierarchical formation of unidimensional supramolecular polymers associated in bundles of muscle-like fibers. Microscopic and scattering techniques reveal that the mesoscopic structure of these bundles depends on the extended or contracted states that the rotaxanes show within individual polymer chains. The observed local dynamics span over several length scales because of a combination of supramolecular and mechanical bonds. This work illustrates the possibility to modify the hierarchical mesoscopic structuring of large polymeric systems by the integrated actuation of individual molecular machines.
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Affiliation(s)
- Antoine Goujon
- SAMS research group, Institut Charles Sadron, CNRS, University of Strasbourg, 23 rue du Loess, BP 84047, 67034 Strasbourg Cedex 2 (France)
| | - Guangyan Du
- SAMS research group, Institut Charles Sadron, CNRS, University of Strasbourg, 23 rue du Loess, BP 84047, 67034 Strasbourg Cedex 2 (France).,Current address: Southwest Petroleum University, No.8 Xindu Avenue, Xindu District, Chengdu City, Sichuan Province 610500 (P.R. China)
| | - Emilie Moulin
- SAMS research group, Institut Charles Sadron, CNRS, University of Strasbourg, 23 rue du Loess, BP 84047, 67034 Strasbourg Cedex 2 (France)
| | - Gad Fuks
- SAMS research group, Institut Charles Sadron, CNRS, University of Strasbourg, 23 rue du Loess, BP 84047, 67034 Strasbourg Cedex 2 (France)
| | - Mounir Maaloum
- SAMS research group, Institut Charles Sadron, CNRS, University of Strasbourg, 23 rue du Loess, BP 84047, 67034 Strasbourg Cedex 2 (France)
| | - Eric Buhler
- Matière et Systèmes Complexes (MSC) Laboratory, University of Paris Diderot-Paris VII, UMR 7057, Bâtiment Condorcet, 75205 Paris Cedex 13 (France)
| | - Nicolas Giuseppone
- SAMS research group, Institut Charles Sadron, CNRS, University of Strasbourg, 23 rue du Loess, BP 84047, 67034 Strasbourg Cedex 2 (France).
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19
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Goujon A, Du G, Moulin E, Fuks G, Maaloum M, Buhler E, Giuseppone N. Hierarchical Self-Assembly of Supramolecular Muscle-Like Fibers. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201509813] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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20
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Sirven AM, Garbage R, Qiao Y, Kammerer C, Rapenne G. Synthesis of Functionalized Mono-, Bis-, and Trisethynyltriptycenes for One-Dimensional Self-Assembly on Surfaces. Chemistry 2015; 21:15013-9. [PMID: 26334027 DOI: 10.1002/chem.201502195] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2015] [Indexed: 11/11/2022]
Abstract
This paper describes the synthesis of triptycene-based building blocks that are able to interact through hydrogen bonds to form one-dimensional self-assembled motifs on surfaces. We designed 9,10-diethynyltriptycene derivatives functionalized at the ethynyl end groups by a variety of hydrogen-bonding groups for homomolecular recognition and complementary building blocks for heteromolecular recognition. We also present the synthesis of bis- and trisethynyltriptycenes with terminal alkyne functional groups available for on-surface azide-alkyne cycloaddition reaction to expand the potential of the triptycene building block.
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Affiliation(s)
- Agnès M Sirven
- NanoSciences Group, CEMES, CNRS UPR 8011, 29 rue J. Marvig, 31055 Toulouse (France)
| | - Romain Garbage
- NanoSciences Group, CEMES, CNRS UPR 8011, 29 rue J. Marvig, 31055 Toulouse (France)
| | - Yun Qiao
- NanoSciences Group, CEMES, CNRS UPR 8011, 29 rue J. Marvig, 31055 Toulouse (France).,Graduate School of Materials Science, Nara Institute of Science and Technology, NAIST, Ikoma, Nara 630-0192 (Japan)
| | - Claire Kammerer
- NanoSciences Group, CEMES, CNRS UPR 8011, 29 rue J. Marvig, 31055 Toulouse (France).,Université de Toulouse, UPS, 29 rue J. Marvig, 31055 Toulouse (France)
| | - Gwénaël Rapenne
- NanoSciences Group, CEMES, CNRS UPR 8011, 29 rue J. Marvig, 31055 Toulouse (France). .,Université de Toulouse, UPS, 29 rue J. Marvig, 31055 Toulouse (France).
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21
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Tahara K, Kaneko K, Katayama K, Itano S, Nguyen CH, Amorim DDD, De Feyter S, Tobe Y. Formation of Multicomponent Star Structures at the Liquid/Solid Interface. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015; 31:7032-7040. [PMID: 26061362 DOI: 10.1021/acs.langmuir.5b01507] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
To demonstrate key roles of multiple interactions between multiple components and multiple phases in the formation of an uncommon self-assembling pattern, we present here the construction of a porous hexagonal star (h-star) structure using a trigonal molecular building block at the liquid/solid interface. For this purpose, self-assembly of hexaalkoxy-substituted dehydrobenzo[12]annulene derivatives DBA-OCns was investigated at the tetradecane/graphite interface by means of scanning tunneling microscopy (STM). Monolayer structures were significantly influenced by coadsorbed tetradecane molecules depending on the alkyl chains length (C13-C16) of DBA-OCn. However, none of DBA-OCn molecules formed the expected trigonal complexes, indicating that an additional driving force is necessary for the formation of the trigonal complex and its assembly into the h-star structure. As a first approach, we employed the "guest induced structural change" for the formation of the h-star structure. In the presence of two guest molecules, nonsubstituted DBA and hexakis(phenylethynyl)benzene which fit the respective pores, an h-star structure was formed by DBA-OC15 at the tetradecane/graphite interface. Moreover, a tetradecane molecule was coadsorbed between a pair of alkyl chains of DBA-OC15, thereby blocking the interdigitation of the alkyl chain pairs. Therefore, the h-star structure results from the self-assembly of the four molecular components including the solvent molecule. The second approach is based on aggregation of perfluoroalkyl chains via fluorophilicity of DBA-F, in which the perfluoroalkyl groups are substituted at the end of three alkyl chains of DBA-OCn via p-phenylene linkers. A trigonal complex consisting of DBA-F and three tetradecane molecules formed an h-star structure, in which the perfluoroalkyl groups that orient into the alkane solution phase aggregated at the hexagonal pore via fluorophilicity. The present result provides useful insight into the design and control of complex molecular self-assembly at the liquid/solid interface.
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Affiliation(s)
- Kazukuni Tahara
- †Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Kyohei Kaneko
- †Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Keisuke Katayama
- †Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Shintaro Itano
- †Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Chi Huan Nguyen
- †Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Deborah D D Amorim
- †Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Steven De Feyter
- ‡Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200 F, 3001 Leuven, Belgium
| | - Yoshito Tobe
- †Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
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Đorđević L, Marangoni T, Miletić T, Rubio-Magnieto J, Mohanraj J, Amenitsch H, Pasini D, Liaros N, Couris S, Armaroli N, Surin M, Bonifazi D. Solvent Molding of Organic Morphologies Made of Supramolecular Chiral Polymers. J Am Chem Soc 2015; 137:8150-60. [DOI: 10.1021/jacs.5b02448] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Luka Đorđević
- Department
of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Piazzale Europa 1, 34127 Trieste, Italy
| | - Tomas Marangoni
- Department
of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Piazzale Europa 1, 34127 Trieste, Italy
| | - Tanja Miletić
- Department
of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Piazzale Europa 1, 34127 Trieste, Italy
| | - Jenifer Rubio-Magnieto
- Laboratory
for Chemistry of Novel Materials, Center for Innovation in Materials
and Polymers, University of Mons−UMONS, 20 Place du Parc, B-7000 Mons, Belgium
| | - John Mohanraj
- Istituto
per la Sintesi Organica e la Fotoreattività, Consiglio Nazionale delle Ricerche, Via Gobetti 101, 40129 Bologna, Italy
| | - Heinz Amenitsch
- Institute
of Inorganic Chemistry, Graz University of Technology, Stremayrgasse
9, 8010 Graz, Austria
| | - Dario Pasini
- Department
of Chemistry and INSTM UdR Pavia, University of Pavia, Viale Taramelli
10, 27100 Pavia, Italy
| | - Nikos Liaros
- Department
of Physics, University of Patras, 26504 Patras, Greece
- Institute
of Chemical Engineering Sciences, Foundation for Research and Technology—Hellas, P.O. Box 1414, Patras 26504, Greece
| | - Stelios Couris
- Department
of Physics, University of Patras, 26504 Patras, Greece
- Institute
of Chemical Engineering Sciences, Foundation for Research and Technology—Hellas, P.O. Box 1414, Patras 26504, Greece
| | - Nicola Armaroli
- Istituto
per la Sintesi Organica e la Fotoreattività, Consiglio Nazionale delle Ricerche, Via Gobetti 101, 40129 Bologna, Italy
| | - Mathieu Surin
- Laboratory
for Chemistry of Novel Materials, Center for Innovation in Materials
and Polymers, University of Mons−UMONS, 20 Place du Parc, B-7000 Mons, Belgium
| | - Davide Bonifazi
- Department
of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Piazzale Europa 1, 34127 Trieste, Italy
- Namur
Research College and Department of Chemistry, University of Namur−UNamur, Rue de Bruxelles 61, 5000 Namur, Belgium
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23
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Tahara K, Gotoda J, Carroll CN, Hirose K, De Feyter S, Tobe Y. Square Tiling by Square Macrocycles at the Liquid/Solid Interface: Co-crystallisation with One- or Two-Dimensional Order. Chemistry 2015; 21:6806-16. [DOI: 10.1002/chem.201500026] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2015] [Indexed: 11/09/2022]
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Zhang JL, Zhong S, Zhong JQ, Niu TC, Hu WP, Wee ATS, Chen W. Rational design of two-dimensional molecular donor-acceptor nanostructure arrays. NANOSCALE 2015; 7:4306-24. [PMID: 25684203 DOI: 10.1039/c4nr06741j] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The construction of long-range ordered organic donor-acceptor nanostructure arrays over microscopic areas supported on solid substrates is one of the most challenging tasks towards the realization of molecular nanodevices. They can also be used as ideal model systems to understand light induced charge transfer, charge separation and energy conversion processes and mechanisms at the nanometer scale. The aim of this paper is to highlight recent advances and progress in this topic. Special attention is given to two different strategies for the construction of organic donor-acceptor nanostructure arrays, namely (i) molecular self-assembly on artificially patterned or pre-defined molecular surface nanotemplates and (ii) molecular nanostructure formation steered via directional and selective intermolecular interactions. The interfacial charge transfer and the energy level alignment of these donor-acceptor nanostructures are also discussed.
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Affiliation(s)
- Jia Lin Zhang
- Department of Physics, National University of Singapore, 2 Science Drive 3, 117542, Singapore
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25
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Singh R, Meena JS, Wu CS, Ko FH. Knitting up 2,7-disubstituted carbazole based oligomers through supramolecular interactions for their application in organic thin film transistors. Phys Chem Chem Phys 2015; 17:5227-35. [DOI: 10.1039/c4cp05241b] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A specific molecule has been knitted up to form a supramolecular architecture and applied to organic thin film transistors.
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Affiliation(s)
- Ranjodh Singh
- Department of Materials Science and Engineering
- National Chiao Tung University
- Hsinchu
- Taiwan
| | - Jagan Singh Meena
- Department of Materials Science and Engineering
- National Chiao Tung University
- Hsinchu
- Taiwan
- Department of Electronics
| | - Chung-Shu Wu
- Department of Materials Science and Engineering
- National Chiao Tung University
- Hsinchu
- Taiwan
| | - Fu-Hsiang Ko
- Department of Materials Science and Engineering
- National Chiao Tung University
- Hsinchu
- Taiwan
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Xue Y, Kim MK, Pašková T, Zimmt MB. Odd or even? Monolayer domain size depends on diyne position in alkadiynylanthracenes. J Phys Chem B 2013; 117:15856-65. [PMID: 24063583 DOI: 10.1021/jp4084376] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
1,5-(Alkadiynyl)anthracenes self-assemble single component and multicomponent monolayers at the solution-HOPG interface. An alkadiynyl chain's kinked shape constrains the molecular structures with which it can close-pack. This affords rudimentary molecular recognition that has been used to direct self-assembly of 1-D patterned, multicomponent monolayers. The unit cell building blocks of single- and multicomponent alkadiynylanthracene monolayers repeat with high fidelity for 100s of nanometers along the side chain direction. Unit cell repeat fidelity along the orthogonal, anthracene column direction of the monolayer depends on diyne location within the side chain; even-position diyne side chains produce high fidelity of unit cell repeats and wider domain widths along the anthracene columns, whereas odd-position diyne side chains produce more frequent domain interfaces that disrupt the anthracene columns. Alkadiynylanthracene monolayers may be viewed as stacks of 1-D molecular tapes. 1-D tape molecular composition, sequence, and intratape side chain alignment are dictated by shape complementarity of the kinked alkadiynyl side chains. Stacking alignments of adjacent 1-D tapes are controlled by shape matching of tape peripheries and determine repeat fidelity along the anthracene columns. Tapes stacked with a constant intertape alignment comprise crystalline domains that repeat along the anthracene columns. The 1-D tapes formed by anthracenes with odd-position diynes have triangle wave peripheries that close-pack in multiple stacking alignments. This reduces unit cell repeat fidelity and decreases the widths of crystalline domains along the anthracene columns. Even-position diyne side chains form 1-D tapes with trapezoid wave peripheries that close-pack in only one stacking alignment. This generates higher stacking fidelity, larger domain widths, and fewer domain interfaces along the anthracene columns of even-position diyne monolayers. Even- and odd-position diyne monolayers exhibit comparable densities of interfaces between enantiotopic domains and between domains aligned along different graphite symmetry axes. These interfaces likely arise through collisions of independently nucleated/growing domains and persist for lack of kinetically competent pathways that interconvert or merge the domains.
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Affiliation(s)
- Yi Xue
- Department of Chemistry, Brown University , Providence, Rhode Island 02912, United States
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27
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Marangoni T, Bonifazi D. Nano- and microstructuration of supramolecular materials driven by H-bonded uracil·2,6-diamidopyridine complexes. NANOSCALE 2013; 5:8837-8851. [PMID: 23903960 DOI: 10.1039/c3nr01711g] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
In the last few decades, multiple H-bonded arrays have been shown to be versatile tools to prepare functional supramolecular materials. Supramolecular complexes formed by uracil (Ur) and 2,6-diamidopyridine (DAP) developed by Lehn are the first examples of multiple H-bonded systems governing the formation of supramolecular polymers in solution. Although a large variety of complementary multiple H-bonded complexes has been prepared, the use of the heteromolecular Ur·DAP complex still remains very promising due to its ease of preparation and its intermediate association strength that ensures a dynamical character to the self-assembly and self-organisation processes. In this feature article, we report a detailed account on the results that our group has obtained in this field by designing and engineering a novel library of shape persistent molecular modules able to transfer their geometrical information to the final supramolecular architectures through the formation of Ur·DAP complexes both at the nanoscopic and microscopic levels.
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Affiliation(s)
- Tomas Marangoni
- Dipartimento di Scienze Chimiche e Farmaceutiche and UdR INSTM, Università di Trieste, Piazzale Europa 1, 34127 Trieste, Italy
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28
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Pillay V, Seedat A, Choonara YE, du Toit LC, Kumar P, Ndesendo VMK. A review of polymeric refabrication techniques to modify polymer properties for biomedical and drug delivery applications. AAPS PharmSciTech 2013; 14:692-711. [PMID: 23543606 PMCID: PMC3665995 DOI: 10.1208/s12249-013-9955-z] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2012] [Accepted: 03/05/2013] [Indexed: 01/14/2023] Open
Abstract
Polymers are extensively used in the pharmaceutical and medical field because of their unique and phenomenal properties that they display. They are capable of demonstrating drug delivery properties that are smart and novel, such properties that are not achievable by employing the conventional excipients. Appropriately, polymeric refabrication remains at the forefront of process technology development in an endeavor to produce more useful pharmaceutical and medical products because of the multitudes of smart properties that can be attained through the alteration of polymers. Small alterations to a polymer by either addition, subtraction, self-reaction, or cross reaction with other entities have the capability of generating polymers with properties that are at the level to enable the creation of novel pharmaceutical and medical products. Properties such as stimuli-responsiveness, site targeting, and chronotherapeutics are no longer figures of imaginations but have become a reality through utilizing processes of polymer refabrication. This article has sought to review the different techniques that have been employed in polymeric refabrication to produce superior products in the pharmaceutical and medical disciplines. Techniques such as grafting, blending, interpenetrating polymers networks, and synthesis of polymer complexes will be viewed from a pharmaceutical and medical perspective along with their synthetic process required to attain these products. In addition to this, each process will be evaluated according to its salient features, impeding features, and the role they play in improving current medical devices and procedures.
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Affiliation(s)
- Viness Pillay
- Department of Pharmacy and Pharmacology, Faculty of Health Sciences, University of the Witwatersrand, 7 York Road, Parktown, 2193, Johannesburg, South Africa.
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Zhang JL, Niu TC, Wee ATS, Chen W. Self-assembly of binary molecular nanostructure arrays on graphite. Phys Chem Chem Phys 2013; 15:12414-27. [DOI: 10.1039/c3cp00023k] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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30
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31
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Ośmiałowski B, Kolehmainen E, Ikonen S, Valkonen A, Kwiatkowski A, Grela I, Haapaniemi E. 2-Acylamino- and 2,4-Bis(acylamino)pyrimidines as Supramolecular Synthons Analyzed by Multiple Noncovalent Interactions. DFT, X-ray Diffraction, and NMR Spectral Studies. J Org Chem 2012; 77:9609-19. [PMID: 23020688 DOI: 10.1021/jo301643z] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Borys Ośmiałowski
- Faculty of Chemical Technology and Engineering, University of Technology and Life Sciences, Seminaryjna
3, PL-85-326 Bydgoszcz, Poland
| | - Erkki Kolehmainen
- Department of Chemistry, University of Jyväskylä, P.O. Box 35, FI-40014 Finland
| | - Satu Ikonen
- Department of Chemistry, University of Jyväskylä, P.O. Box 35, FI-40014 Finland
| | - Arto Valkonen
- Department of Chemistry, University of Jyväskylä, P.O. Box 35, FI-40014 Finland
| | - Adam Kwiatkowski
- Faculty of Chemical Technology and Engineering, University of Technology and Life Sciences, Seminaryjna
3, PL-85-326 Bydgoszcz, Poland
| | - Izabela Grela
- Faculty of Chemical Technology and Engineering, University of Technology and Life Sciences, Seminaryjna
3, PL-85-326 Bydgoszcz, Poland
| | - Esa Haapaniemi
- Department of Chemistry, University of Jyväskylä, P.O. Box 35, FI-40014 Finland
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32
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Szekrényes Z, Kamarás K, Tarczay G, Llanes-Pallás A, Marangoni T, Prato M, Bonifazi D, Björk J, Hanke F, Persson M. Melting of Hydrogen Bonds in Uracil Derivatives Probed by Infrared Spectroscopy and ab Initio Molecular Dynamics. J Phys Chem B 2012; 116:4626-33. [DOI: 10.1021/jp212115h] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Zsolt Szekrényes
- Institute for Solid State Physics
and Optics, Wigner Research Centre for Physics, Hungarian Academy of Sciences, H-1525 Budapest, Hungary
| | - Katalin Kamarás
- Institute for Solid State Physics
and Optics, Wigner Research Centre for Physics, Hungarian Academy of Sciences, H-1525 Budapest, Hungary
| | - György Tarczay
- Laboratory of Molecular Spectroscopy,
Institute of Chemistry, Eötvös Loránd University, H-1518 Budapest, Hungary
| | - Anna Llanes-Pallás
- Dipartimento di Scienze Farmaceutiche
and INSTM UdR di Trieste, Università degli Studi di Trieste, Piazzale Europa 1, 34127 Trieste, Italy
| | - Tomas Marangoni
- Dipartimento di Scienze Farmaceutiche
and INSTM UdR di Trieste, Università degli Studi di Trieste, Piazzale Europa 1, 34127 Trieste, Italy
| | - Maurizio Prato
- Dipartimento di Scienze Farmaceutiche
and INSTM UdR di Trieste, Università degli Studi di Trieste, Piazzale Europa 1, 34127 Trieste, Italy
| | - Davide Bonifazi
- Dipartimento di Scienze Farmaceutiche
and INSTM UdR di Trieste, Università degli Studi di Trieste, Piazzale Europa 1, 34127 Trieste, Italy
- Department of Chemistry, University of Namur (FUNDP), Rue de Bruxelles 61, 5000
Namur, Belgium
| | - Jonas Björk
- The Surface
Science Research
Centre, The University of Liverpool, Liverpool
L69 3BX, U.K
- Department of Physics,
Chemistry, and
Biology, IFM, Linköping University, 58183 Linköping, Sweden
| | - Felix Hanke
- The Surface
Science Research
Centre, The University of Liverpool, Liverpool
L69 3BX, U.K
| | - Mats Persson
- The Surface
Science Research
Centre, The University of Liverpool, Liverpool
L69 3BX, U.K
- Department of Applied Physics, Chalmers University of Technology, 41296 Göteborg,
Sweden
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33
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Papageorgiou AC, Fischer S, Reichert J, Diller K, Blobner F, Klappenberger F, Allegretti F, Seitsonen AP, Barth JV. Chemical transformations drive complex self-assembly of uracil on close-packed coinage metal surfaces. ACS NANO 2012; 6:2477-2486. [PMID: 22356544 DOI: 10.1021/nn204863p] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
We address the interplay of adsorption, chemical nature, and self-assembly of uracil on the Ag(111) and Cu(111) surfaces as a function of molecular coverage (0.3 to 1 monolayer) and temperature. We find that both metal surfaces act as templates and the Cu(111) surface acts additionally as a catalyst for the resulting self-assembled structures. With a combination of STM, synchrotron XPS, and NEXAFS studies, we unravel a distinct polymorphism on Cu(111), in stark contrast to what is observed for the case of uracil on the more inert Ag(111) surface. On Ag(111) uracil adsorbs flat and intact and forms close-packed two-dimensional islands. The self-assembly is driven by stable hydrogen-bonded dimers with poor two-dimensional order. On Cu(111) complex structures are observed exhibiting, in addition, a strong annealing temperature dependence. We determine the corresponding structural transformations to be driven by gradual deprotonation of the uracil molecules. Our XPS study reveals unambiguously the tautomeric signature of uracil in the contact layer and on Cu(111) the molecule's deprotonation sites. The metal-mediated deprotonation of uracil and the subsequent electron localization in the molecule determine important biological reactions. Our data show a dependence between molecular coverage and molecule-metal interaction on Cu(111), as the molecules tilt at higher coverages in order to accommodate a higher packing density. After deprotonation of both uracil N atoms, we observe an adsorption geometry that can be understood as coordinative anchoring with a significant charge redistribution in the molecule. DFT calculations are employed to analyze the surface bonding and accurately describe the pertaining electronic structure.
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34
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Xue Y, Zimmt MB. Patterned monolayer self-assembly programmed by side chain shape: four-component gratings. J Am Chem Soc 2012; 134:4513-6. [PMID: 22369569 DOI: 10.1021/ja2115019] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A molecular recognition strategy based on alkadiyne side chain shape is used to self-assemble a four-component, 1D-patterned monolayer at the solution-HOPG interface. The designed monolayer unit cell contains six molecules and spans 23 nm × 1 nm. The unit cell's internal structure and packing are driven by complementary shapes and lengths of six different alkadiyne side chains. A solution of the four compounds on HOPG self-assembles monolayers (i) comprised, almost entirely, of the intended unit cell, (ii) exhibiting patterned domains spanning 10(4) nm(2), and (iii) which are sufficiently robust that patterned domains survive solvent rinsing and drying. The patterned monolayer affords 1D-feature spacings ranging from 3.3 to 23 nm. The results demonstrate the remarkable selectivity afforded by molecular recognition based on alkadiyne side chain shape and the ability to program highly complex 1D-patterns in self-assembled monolayers.
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Affiliation(s)
- Yi Xue
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, United States
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36
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Quintana M, Traboulsi H, Llanes-Pallas A, Marega R, Bonifazi D, Prato M. Multiple hydrogen bond interactions in the processing of functionalized multi-walled carbon nanotubes. ACS NANO 2012; 6:23-31. [PMID: 22200170 DOI: 10.1021/nn203471t] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
In a set of unprecedented experiments combining "bottom-up" and "top-down" approaches, we report the engineering of patterned surfaces in which functionalized MWCNTs have been selectively adsorbed on polymeric matrices as obtained by microlithographic photo-cross-linking of polystyrene polymers bearing 2,6-di(acetylamino)-4-pyridyl moieties (PS1) deposited on glass or Si. All patterned surfaces have been characterized by optical, fluorescence, and SEM imaging techniques, showing the local confinement of the CNTs materials on the polymeric microgrids. These results open new possibilities toward the controlled manipulation of CNTs on surfaces, using H-bonding self-assembly as the main driving force.
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Affiliation(s)
- Mildred Quintana
- Center of Excellence for Nanostructured Materials (CENMAT), INSTM UdR di Trieste, Dipartimento di Scienze Chimiche e Farmaceutiche, University of Trieste, Piazzale Europa 1, I-34127 Trieste, Italy
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37
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Llanes-Pallas A, Yoosaf K, Traboulsi H, Mohanraj J, Seldrum T, Dumont J, Minoia A, Lazzaroni R, Armaroli N, Bonifazi D. Modular Engineering of H-Bonded Supramolecular Polymers for Reversible Functionalization of Carbon Nanotubes. J Am Chem Soc 2011; 133:15412-24. [DOI: 10.1021/ja2011516] [Citation(s) in RCA: 74] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Anna Llanes-Pallas
- Università di Trieste, Dipartimento di Scienze Chimiche e Farmaceutiche and INSTM UdR di Trieste, Italy
| | - K. Yoosaf
- Molecular Photoscience Group, Istituto per la Sintesi Organica e la Fotoreattività, Consiglio Nazionale delle Ricerche (CNR−ISOF), Bologna, Italy
| | | | - John Mohanraj
- Molecular Photoscience Group, Istituto per la Sintesi Organica e la Fotoreattività, Consiglio Nazionale delle Ricerche (CNR−ISOF), Bologna, Italy
| | | | | | - Andrea Minoia
- Laboratory for Chemistry of Novel Materials, University of Mons (UMONS), Mons, Belgium
| | - Roberto Lazzaroni
- Laboratory for Chemistry of Novel Materials, University of Mons (UMONS), Mons, Belgium
| | - Nicola Armaroli
- Molecular Photoscience Group, Istituto per la Sintesi Organica e la Fotoreattività, Consiglio Nazionale delle Ricerche (CNR−ISOF), Bologna, Italy
| | - Davide Bonifazi
- Università di Trieste, Dipartimento di Scienze Chimiche e Farmaceutiche and INSTM UdR di Trieste, Italy
- Department of Chemistry
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38
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Caterbow D, Ziener U. Peculiar adsorbed phase behaviour of binary mixtures of oligopyridines and extension to a ternary mixture in a host-guest system. Chem Commun (Camb) 2011; 47:9366-8. [PMID: 21769331 DOI: 10.1039/c1cc13526k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Binary mixtures of bis(terpyridine)s show a U shape behaviour in concentration dependent surface coverage at constant molar ratio. The phase separation can be exploited to create ternary mixtures with exclusive adsorption of the third component in one phase.
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Affiliation(s)
- Daniel Caterbow
- Institute of Organic Chemistry III-Macromolecular Chemistry, University of Ulm, Albert-Einstein-Allee 11, D-89075 Ulm, Germany
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39
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Knudsen MM, Kalashnyk N, Masini F, Cramer JR, Lægsgaard E, Besenbacher F, Linderoth TR, Gothelf KV. Controlling Chiral Organization of Molecular Rods on Au(111) by Molecular Design. J Am Chem Soc 2011; 133:4896-905. [DOI: 10.1021/ja110052n] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Martin M. Knudsen
- Danish National Research Foundation: Center for DNA Nanotechnology (CDNA), Department of Chemistry and iNANO, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
| | - Nataliya Kalashnyk
- Interdisciplinary Nanoscience Center (iNANO) and Department of Physics and Astronomy, Aarhus University, Ny Munkegade 118, 8000 Aarhus C, Denmark
| | - Federico Masini
- Interdisciplinary Nanoscience Center (iNANO) and Department of Physics and Astronomy, Aarhus University, Ny Munkegade 118, 8000 Aarhus C, Denmark
| | - Jacob R. Cramer
- Danish National Research Foundation: Center for DNA Nanotechnology (CDNA), Department of Chemistry and iNANO, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
| | - Erik Lægsgaard
- Interdisciplinary Nanoscience Center (iNANO) and Department of Physics and Astronomy, Aarhus University, Ny Munkegade 118, 8000 Aarhus C, Denmark
| | - Flemming Besenbacher
- Interdisciplinary Nanoscience Center (iNANO) and Department of Physics and Astronomy, Aarhus University, Ny Munkegade 118, 8000 Aarhus C, Denmark
| | - Trolle R. Linderoth
- Interdisciplinary Nanoscience Center (iNANO) and Department of Physics and Astronomy, Aarhus University, Ny Munkegade 118, 8000 Aarhus C, Denmark
| | - Kurt V. Gothelf
- Danish National Research Foundation: Center for DNA Nanotechnology (CDNA), Department of Chemistry and iNANO, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark
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40
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Ciesielski A, Stefankiewicz AR, Hanke F, Persson M, Lehn JM, Samorì P. Rigid dimers formed through strong interdigitated H-bonds yield compact 1D supramolecular helical polymers. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2011; 7:342-350. [PMID: 21294263 DOI: 10.1002/smll.201001419] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2010] [Revised: 09/30/2010] [Indexed: 05/30/2023]
Abstract
Hierarchical self-assembly of small abiotic molecular modules interacting through noncovalent forces is increasingly being used to generate functional structures and materials for electronic, catalytic, and biomedical applications. The greatest control over the geometry in H-bond supramolecular architectures, especially in H-bonded supramolecular polymers, can be achieved by using conformationally rigid molecular modules undergoing self-assembly through strong H-bonds. Their binding strength depends on the multiplicity of the H-bonds, the nature of donor/acceptor pairs and their secondary attractive/repulsive interactions. Here a functionalized molecular module is described, which is capable of self-associating through self-complementary H-bonding patterns comprising four strong and two medium-strength H-bonds to form dimers. The self-association of these phenylpyrimidine-based dimers through directional H-bonding between two lateral pyridin-2(1H)-one units of neighboring molecules allows the formation of highly compact 1D supramolecular polymers by self-assembly on graphite. A concentration-dependent study by scanning tunneling microscopy at the solid-liquid interface, corroborated by dispersion-corrected density functional studies, reveals the controlled generation of either linear supramolecular 2D arrays, or long helical supramolecular polymers with a high shape persistence.
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Affiliation(s)
- Artur Ciesielski
- ISIS/CNRS UMR 7006, Université de Strasbourg, 8 allée Gaspard Monge, 67000 Strasbourg, France
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41
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Ciesielski A, Colella S, Zalewski L, Bruchmann B, Samorì P. Nanopatterning the graphite surface with ordered macrocyclic or ribbon-like assemblies of isocytosine derivatives: an STM study. CrystEngComm 2011. [DOI: 10.1039/c1ce05521f] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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42
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Mohnani S, Bonifazi D. Supramolecular architectures of porphyrins on surfaces: The structural evolution from 1D to 2D to 3D to devices. Coord Chem Rev 2010. [DOI: 10.1016/j.ccr.2010.05.006] [Citation(s) in RCA: 147] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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43
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Shi Z, Lin N. Structural and Chemical Control in Assembly of Multicomponent Metal−Organic Coordination Networks on a Surface. J Am Chem Soc 2010; 132:10756-61. [DOI: 10.1021/ja1018578] [Citation(s) in RCA: 87] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ziliang Shi
- Department of Physics, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China
| | - Nian Lin
- Department of Physics, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China
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44
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NMR and quantum chemical studies on association of 2,6-bis(acylamino)pyridines with selected imides and 2,2′-dipyridylamine. Struct Chem 2010. [DOI: 10.1007/s11224-010-9646-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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45
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Shen YT, Li M, Guo YY, Deng K, Zeng QD, Wang C. The Site-Selective Molecular Recognition of Ternary Architectures by using Supramolecular Nanoporous Networks at a Liquid-Solid Interface. Chem Asian J 2010; 5:787-90. [DOI: 10.1002/asia.200900439] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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46
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Tancini F, Genovese D, Montalti M, Cristofolini L, Nasi L, Prodi L, Dalcanale E. Hierarchical Self-Assembly on Silicon. J Am Chem Soc 2010; 132:4781-9. [DOI: 10.1021/ja9099938] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Francesca Tancini
- Dipartimento di Chimica Organica e Industriale, Università di Parma, and INSTM UdR Parma, 43124 Parma, Italy, Dipartimento “G. Ciamician”, Università di Bologna, 40126 Bologna, Italy, Dipartimento di Fisica, Università di Parma, 43124 Parma, Italy, and Istituto CNR-IMEM, 43124 Parma, Italy
| | - Damiano Genovese
- Dipartimento di Chimica Organica e Industriale, Università di Parma, and INSTM UdR Parma, 43124 Parma, Italy, Dipartimento “G. Ciamician”, Università di Bologna, 40126 Bologna, Italy, Dipartimento di Fisica, Università di Parma, 43124 Parma, Italy, and Istituto CNR-IMEM, 43124 Parma, Italy
| | - Marco Montalti
- Dipartimento di Chimica Organica e Industriale, Università di Parma, and INSTM UdR Parma, 43124 Parma, Italy, Dipartimento “G. Ciamician”, Università di Bologna, 40126 Bologna, Italy, Dipartimento di Fisica, Università di Parma, 43124 Parma, Italy, and Istituto CNR-IMEM, 43124 Parma, Italy
| | - Luigi Cristofolini
- Dipartimento di Chimica Organica e Industriale, Università di Parma, and INSTM UdR Parma, 43124 Parma, Italy, Dipartimento “G. Ciamician”, Università di Bologna, 40126 Bologna, Italy, Dipartimento di Fisica, Università di Parma, 43124 Parma, Italy, and Istituto CNR-IMEM, 43124 Parma, Italy
| | - Lucia Nasi
- Dipartimento di Chimica Organica e Industriale, Università di Parma, and INSTM UdR Parma, 43124 Parma, Italy, Dipartimento “G. Ciamician”, Università di Bologna, 40126 Bologna, Italy, Dipartimento di Fisica, Università di Parma, 43124 Parma, Italy, and Istituto CNR-IMEM, 43124 Parma, Italy
| | - Luca Prodi
- Dipartimento di Chimica Organica e Industriale, Università di Parma, and INSTM UdR Parma, 43124 Parma, Italy, Dipartimento “G. Ciamician”, Università di Bologna, 40126 Bologna, Italy, Dipartimento di Fisica, Università di Parma, 43124 Parma, Italy, and Istituto CNR-IMEM, 43124 Parma, Italy
| | - Enrico Dalcanale
- Dipartimento di Chimica Organica e Industriale, Università di Parma, and INSTM UdR Parma, 43124 Parma, Italy, Dipartimento “G. Ciamician”, Università di Bologna, 40126 Bologna, Italy, Dipartimento di Fisica, Università di Parma, 43124 Parma, Italy, and Istituto CNR-IMEM, 43124 Parma, Italy
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47
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Pollard A, Perkins E, Smith N, Saywell A, Goretzki G, Phillips A, Argent S, Sachdev H, Müller F, Hüfner S, Gsell S, Fischer M, Schreck M, Osterwalder J, Greber T, Berner S, Champness N, Beton P. Supramolecular Assemblies Formed on an Epitaxial Graphene Superstructure. Angew Chem Int Ed Engl 2010. [DOI: 10.1002/ange.200905503] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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48
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Pollard A, Perkins E, Smith N, Saywell A, Goretzki G, Phillips A, Argent S, Sachdev H, Müller F, Hüfner S, Gsell S, Fischer M, Schreck M, Osterwalder J, Greber T, Berner S, Champness N, Beton P. Supramolecular Assemblies Formed on an Epitaxial Graphene Superstructure. Angew Chem Int Ed Engl 2010; 49:1794-9. [DOI: 10.1002/anie.200905503] [Citation(s) in RCA: 106] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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49
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Bombis C, Weigelt S, Knudsen MM, Nørgaard M, Busse C, Laegsgaard E, Besenbacher F, Gothelf KV, Linderoth TR. Steering organizational and conformational surface chirality by controlling molecular chemical functionality. ACS NANO 2010; 4:297-311. [PMID: 20000754 DOI: 10.1021/nn9012803] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Molecular chirality on surfaces has been widely explored, both for intrinsically chiral molecules and for prochiral molecules that become chiral upon adsorption due to the reduced symmetry which follows from surface confinement. However, little attention has been devoted to chiral effects that originate from conformational degrees of freedom for adsorbed molecules. Here we have used scanning tunneling microscopy to investigate the self-assembled structures formed when a class of six linear, organic molecules (oligo-phenylene-ethynylenes) are adsorbed on a Au(111) surface under ultrahigh vacuum conditions. All of the investigated compounds are intrinsically achiral, but most display conformational chirality in the sense that the molecules can adsorb on the surface in different conformations giving rise to either one of two chiral surface enantiomers or a mirror-symmetric achiral meso form. A total of eleven observed adsorption structures are systematically investigated with respect to conformational chirality as well as point chirality (arising where molecular adsorption locally breaks the substrate symmetry) and organizational chirality (arising from the tiling pattern of the molecular backbones). A number of interesting correlations are identified between these different levels of chirality. Most importantly, we demonstrate that it is possible through control of the terminal group functionalization to steer the oligo(phenylene-ethynylene) molecular backbones into surface assemblies that either display pronounced organizational chirality or have mirror symmetric tiling patterns, and that it is furthermore possible to control the conformational surface chirality so the compounds preferentially assume either chiral or achiral surface conformers.
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Affiliation(s)
- Christian Bombis
- Interdisciplinary Nanoscience Center (iNANO) and Department of Physics and Astronomy, Aarhus University, 8000 Aarhus C, Denmark
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50
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Lei S, Tahara K, Adisoejoso J, Balandina T, Tobe Y, De Feyter S. Towards two-dimensional nanoporous networks: crystal engineering at the solid–liquid interface. CrystEngComm 2010. [DOI: 10.1039/c0ce00282h] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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