1
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Bliksted Roug Pedersen V, Price TW, Kofod N, Zakharov LN, Laursen BW, Jasti R, Brøndsted Nielsen M. Synthesis and Properties of Fluorenone-Containing Cycloparaphenylenes and Their Late-Stage Transformation. Chemistry 2024; 30:e202303490. [PMID: 37930279 DOI: 10.1002/chem.202303490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 11/03/2023] [Accepted: 11/06/2023] [Indexed: 11/07/2023]
Abstract
Cycloparaphenylenes (CPPs) are the smallest possible armchair carbon nanotubes, the properties of which strongly depend on their ring size. They can be further tuned by either peripheral functionalization or by replacing phenylene rings for other aromatic units. Here we show how four novel donor-acceptor chromophores were obtained by incorporating fluorenone or 2-(9H-fluoren-9-ylidene)malononitrile into the loops of two differently sized CPPs. Synthetically, we managed to perform late-stage functionalization of the fluorenone-based rings by high-yielding Knoevenagel condensations. The structures were confirmed by X-ray crystallographic analyses, which revealed that replacing a phenylene for a fused-ring-system acceptor introduces additional strain. The donor-acceptor characters of the CPPs were supported by absorption and fluorescence spectroscopic studies, electrochemical studies (displaying the CPPs as multi-redox systems undergoing reversible or quasi-reversible redox events), as well as by computations. The oligophenylene parts were found to comprise the electron donor units of the macrocycles and the fluorenone parts the acceptor units.
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Affiliation(s)
| | - Tavis W Price
- Department of Chemistry and Biochemistry, Materials Science Institute, and, Knight Campus for Accelerating Scientific Impact, University of Oregon, Eugene, OR 97403, USA
| | - Nicolaj Kofod
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø, Denmark
| | - Lev N Zakharov
- CAMCOR-Center for Advanced Materials Characterization in Oregon, University of Oregon, Eugene, Oregon, 97403, USA
| | - Bo W Laursen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø, Denmark
| | - Ramesh Jasti
- Department of Chemistry and Biochemistry, Materials Science Institute, and, Knight Campus for Accelerating Scientific Impact, University of Oregon, Eugene, OR 97403, USA
| | - Mogens Brøndsted Nielsen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø, Denmark
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2
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Li Z, Zhang J, Li G, Puddephatt RJ. Self-assembly of the smallest and tightest molecular trefoil knot. Nat Commun 2024; 15:154. [PMID: 38168068 PMCID: PMC10762025 DOI: 10.1038/s41467-023-44302-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 12/07/2023] [Indexed: 01/05/2024] Open
Abstract
Molecular knots, whose synthesis presents many challenges, can play important roles in protein structure and function as well as in useful molecular materials, whose properties depend on the size of the knotted structure. Here we report the synthesis by self-assembly of molecular trefoil metallaknot with formula [Au6{1,2-C6H4(OCH2CC)2}3{Ph2P(CH2)4PPh2}3], Au6, from three units of each of the components 1,2-C6H4(OCH2CCAu)2 and Ph2P(CH2)4PPh2. Structure determination by X-ray diffraction revealed that the chiral trefoil knot contains only 54 atoms in the backbone, so that Au6 is the smallest and tightest molecular trefoil knot known to date.
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Affiliation(s)
- Zhiwen Li
- State Key Laboratory of Catalysis, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Jingjing Zhang
- State Key Laboratory of Catalysis, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Gao Li
- State Key Laboratory of Catalysis, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China.
- University of Chinese Academy of Sciences, Beijing, 100049, China.
| | - Richard J Puddephatt
- Department of Chemistry, University of Western Ontario, London, N6A 5B7, Canada.
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3
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Li K, Zhang S, Hu Y, Kang S, Yu X, Wang H, Wang M, Li X. Shape-Dependent Complementary Ditopic Terpyridine Pair with Two Levels of Self-Recognition for Coordination-Driven Self-Assembly. Macromol Rapid Commun 2023; 44:e2200303. [PMID: 35666548 DOI: 10.1002/marc.202200303] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Revised: 05/28/2022] [Indexed: 01/11/2023]
Abstract
Molecular recognition in biological systems plays a vital role in the precise construction of biomacromolecules and the corresponding biological activities. Such recognition mainly relies on the highly specific binding of complementary molecular pairs with complementary sizes, shapes, and intermolecular forces. It still remains challenging to develop artificial complementary motif pairs for coordination-driven self-assembly. Herein, a series of shape-dependent complementary motif pairs, based on ditopic 2,2':6',2″-terpyridine (TPY) backbone, are designed and synthesized. The fidelity degrees of self-assemblies from these motifs are carefully evaluated by multi-dimensional mass spectrometry, nuclear magnetic resonance spectroscopy, and molecular modeling. In addition, two levels of self-recognition in both homoleptic and heteroleptic assembly are discovered in the assembled system. Through finely tuning the shape and size of the ligands, a complementary pair is developed with error-free narcissistically self-sorting at two levels of self-recognition, and the intrinsic principle is carefully investigated.
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Affiliation(s)
- Kehuan Li
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin, 130012, China.,College of Chemistry and Environmental Engineering, Shenzhen University General Hospital, Shenzhen University Clinical Medical Academy, Shenzhen University, Shenzhen, Guangdong, 518060, China
| | - Shunran Zhang
- College of Chemistry and Environmental Engineering, Shenzhen University General Hospital, Shenzhen University Clinical Medical Academy, Shenzhen University, Shenzhen, Guangdong, 518060, China.,Guangdong Provincial Key Laboratory of Distributed Energy Systems, Dongguan University of Technology, Dongguan, Guangdong, 523808, China
| | - Yaqi Hu
- College of Chemistry and Environmental Engineering, Shenzhen University General Hospital, Shenzhen University Clinical Medical Academy, Shenzhen University, Shenzhen, Guangdong, 518060, China
| | - Shimin Kang
- Guangdong Provincial Key Laboratory of Distributed Energy Systems, Dongguan University of Technology, Dongguan, Guangdong, 523808, China
| | - Xiujun Yu
- College of Chemistry and Environmental Engineering, Shenzhen University General Hospital, Shenzhen University Clinical Medical Academy, Shenzhen University, Shenzhen, Guangdong, 518060, China
| | - Heng Wang
- College of Chemistry and Environmental Engineering, Shenzhen University General Hospital, Shenzhen University Clinical Medical Academy, Shenzhen University, Shenzhen, Guangdong, 518060, China
| | - Ming Wang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin, 130012, China
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering, Shenzhen University General Hospital, Shenzhen University Clinical Medical Academy, Shenzhen University, Shenzhen, Guangdong, 518060, China
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4
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5
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Ashbridge Z, Fielden SDP, Leigh DA, Pirvu L, Schaufelberger F, Zhang L. Knotting matters: orderly molecular entanglements. Chem Soc Rev 2022; 51:7779-7809. [PMID: 35979715 PMCID: PMC9486172 DOI: 10.1039/d2cs00323f] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Indexed: 11/29/2022]
Abstract
Entangling strands in a well-ordered manner can produce useful effects, from shoelaces and fishing nets to brown paper packages tied up with strings. At the nanoscale, non-crystalline polymer chains of sufficient length and flexibility randomly form tangled mixtures containing open knots of different sizes, shapes and complexity. However, discrete molecular knots of precise topology can also be obtained by controlling the number, sequence and stereochemistry of strand crossings: orderly molecular entanglements. During the last decade, substantial progress in the nascent field of molecular nanotopology has been made, with general synthetic strategies and new knotting motifs introduced, along with insights into the properties and functions of ordered tangle sequences. Conformational restrictions imparted by knotting can induce allostery, strong and selective anion binding, catalytic activity, lead to effective chiral expression across length scales, binding modes in conformations efficacious for drug delivery, and facilitate mechanical function at the molecular level. As complex molecular topologies become increasingly synthetically accessible they have the potential to play a significant role in molecular and materials design strategies. We highlight particular examples of molecular knots to illustrate why these are a few of our favourite things.
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Affiliation(s)
- Zoe Ashbridge
- Department of Chemistry, The University of Manchester, Manchester, UK
| | | | - David A Leigh
- Department of Chemistry, The University of Manchester, Manchester, UK
- School of Chemistry and Molecular Engineering, East China Normal University, 3663 N Zhongshan Road, Shanghai, China
| | - Lucian Pirvu
- Department of Chemistry, The University of Manchester, Manchester, UK
| | | | - Liang Zhang
- Department of Chemistry, The University of Manchester, Manchester, UK
- School of Chemistry and Molecular Engineering, East China Normal University, 3663 N Zhongshan Road, Shanghai, China
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6
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Ashbridge Z, Knapp OM, Kreidt E, Leigh DA, Pirvu L, Schaufelberger F. Social Self-Sorting Synthesis of Molecular Knots. J Am Chem Soc 2022; 144:17232-17240. [PMID: 36067448 PMCID: PMC9501921 DOI: 10.1021/jacs.2c07682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
We report the synthesis of molecular prime and composite
knots
by social self-sorting of 2,6-pyridinedicarboxamide (pdc) ligands
of differing topicity and stereochemistry. Upon mixing achiral monotopic
and ditopic pdc-ligand strands in a 1:1:1 ratio with Lu(III), a well-defined
heteromeric complex featuring one of each ligand strand and the metal
ion is selectively formed. Introducing point-chiral centers into the
ligands leads to single-sense helical stereochemistry of the resulting
coordination complex. Covalent capture of the entangled structure
by ring-closing olefin metathesis then gives a socially self-sorted
trefoil knot of single topological handedness. In a related manner,
a heteromeric molecular granny knot (a six-crossing composite knot
featuring two trefoil tangles of the same handedness) was assembled
from social self-sorting of ditopic and tetratopic multi-pdc strands.
A molecular square knot (a six-crossing composite knot of two trefoil
tangles of opposite handedness) was assembled by social self-sorting
of a ditopic pdc strand with four (S)-centers and
a tetratopic strand with two (S)- and six (R)-centers. Each of the entangled structures was characterized
by 1H and 13C NMR spectroscopy, mass spectrometry,
and circular dichroism spectroscopy. The precise control of composition
and topological chirality through social self-sorting enables the
rapid assembly of well-defined sequences of entanglements for molecular
knots.
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Affiliation(s)
- Zoe Ashbridge
- Department of Chemistry, University of Manchester, Manchester M13 9PL, U.K
| | - Olivia M Knapp
- Department of Chemistry, University of Manchester, Manchester M13 9PL, U.K
| | - Elisabeth Kreidt
- Department of Chemistry, University of Manchester, Manchester M13 9PL, U.K
| | - David A Leigh
- Department of Chemistry, University of Manchester, Manchester M13 9PL, U.K.,School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Lucian Pirvu
- Department of Chemistry, University of Manchester, Manchester M13 9PL, U.K
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7
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Lei Y, Li Z, Wu G, Zhang L, Tong L, Tong T, Chen Q, Wang L, Ge C, Wei Y, Pan Y, Sue ACH, Wang L, Huang F, Li H. A trefoil knot self-templated through imination in water. Nat Commun 2022; 13:3557. [PMID: 35729153 PMCID: PMC9213439 DOI: 10.1038/s41467-022-31289-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 06/03/2022] [Indexed: 11/24/2022] Open
Abstract
The preparation of topologically nontrivial molecules is often assisted by covalent, supramolecular or coordinative templates that provide spatial pre-organization for all components. Herein, we report a trefoil knot that can be self-assembled efficiently in water without involving additional templates. The direct condensation of three equivalents of a tetraformyl precursor and six equivalents of a chiral diamine produces successfully a [3 + 6] trefoil knot whose intrinsic handedness is dictated by the stereochemical configuration of the diamine linkers. Contrary to the conventional wisdom that imine condensation is not amenable to use in water, the multivalent cooperativity between all the imine bonds within the framework makes this trefoil knot robust in the aqueous environment. Furthermore, the presence of water is proven to be essential for the trefoil knot formation. A topologically trivial macrocycle composed of two tetraformyl and four diamino building blocks is obtained when a similar reaction is performed in organic media, indicating that hydrophobic effect is a major driving force behind the scene.
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Affiliation(s)
- Ye Lei
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Zhaoyong Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
- Key Laboratory of Excited-State Materials of Zhejiang Province, Zhejiang University, Hangzhou, 310027, PR China
| | - Guangcheng Wu
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Lijie Zhang
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, Hangzhou, 311231, PR China
| | - Lu Tong
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Tianyi Tong
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, PR China
| | - Qiong Chen
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Lingxiang Wang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Chenqi Ge
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Yuxi Wei
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Yuanjiang Pan
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Andrew C-H Sue
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, PR China.
| | - Linjun Wang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China.
- Key Laboratory of Excited-State Materials of Zhejiang Province, Zhejiang University, Hangzhou, 310027, PR China.
| | - Feihe Huang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, 310027, PR China.
| | - Hao Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, 310027, PR China.
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8
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Xu GT, Chang XY, Low KH, Wu LL, Wan Q, Shu HX, To WP, Huang JS, Che CM. Self-Assembly of Molecular Trefoil Knots Featuring Pentadecanuclear Homoleptic Au I -, Au I /Ag I -, or Au I /Cu I -Alkynyl Coordination. Angew Chem Int Ed Engl 2022; 61:e202200748. [PMID: 35183066 DOI: 10.1002/anie.202200748] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2022] [Indexed: 12/17/2022]
Abstract
Metal-free and metal-containing molecular trefoil knots are fascinating ensembles that are usually covalently assembled, the latter requiring the rational design of di- or multidentate/multipodal ligands as connectors. In this work, we describe the self-assembly of pentadecanuclear AuI trefoil knots [Au15 (C≡CR)15 ] from monoalkynes HC≡CR (R=9,9-X2 -fluorenyl with X=nBu, n-hexyl) and [AuI (THT)Cl]. Hetero-bimetallic counterparts [Au9 M6 (C≡CR)15 ] (M=Cu/Ag) were self-assembled by reactions of [Au15 (C≡CR)15 ] with [Cu(MeCN)4 ]+ /AgNO3 and HC≡CR. The type of pentadecanuclear trefoil knots described herein is characterized by X-ray crystallography, 2D NMR and HR-ESI-MS. [Au9 Cu6 (C≡CR)15 ] is relatively stable in hexane; its excited state properties were investigated. DFT calculations revealed that non-covalent metal-metal and metal-ligand interactions, together with longer alkyl chain-strengthened inter-ligand dispersion interactions, govern the stability of the trefoil knot structures.
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Affiliation(s)
- Guang-Tao Xu
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
| | - Xiao-Yong Chang
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, China
| | - Kam-Hung Low
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
| | - Liang-Liang Wu
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
| | - Qingyun Wan
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
| | - Hui-Xing Shu
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
| | - Wai-Pong To
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
| | - Jie-Sheng Huang
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
| | - Chi-Ming Che
- State Key Laboratory of Synthetic Chemistry, HKU-CAS Joint Laboratory on New Materials, and Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China
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9
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Au-Yeung HY, Deng Y. Distinctive features and challenges in catenane chemistry. Chem Sci 2022; 13:3315-3334. [PMID: 35432874 PMCID: PMC8943846 DOI: 10.1039/d1sc05391d] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 02/04/2022] [Indexed: 11/21/2022] Open
Abstract
From being an aesthetic molecular object to a building block for the construction of molecular machines, catenanes and related mechanically interlocked molecules (MIMs) continue to attract immense interest in many research areas. Catenane chemistry is closely tied to that of rotaxanes and knots, and involves concepts like mechanical bonds, chemical topology and co-conformation that are unique to these molecules. Yet, because of their different topological structures and mechanical bond properties, there are some fundamental differences between the chemistry of catenanes and that of rotaxanes and knots although the boundary is sometimes blurred. Clearly distinguishing these differences, in aspects of bonding, structure, synthesis and properties, between catenanes and other MIMs is therefore of fundamental importance to understand their chemistry and explore the new opportunities from mechanical bonds.
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Affiliation(s)
- Ho Yu Au-Yeung
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
- State Key Laboratory of Synthetic Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
| | - Yulin Deng
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
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10
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Ashbridge Z, Kreidt E, Pirvu L, Schaufelberger F, Stenlid JH, Abild-Pedersen F, Leigh DA. Vernier template synthesis of molecular knots. Science 2022; 375:1035-1041. [PMID: 35239374 DOI: 10.1126/science.abm9247] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Molecular knots are often prepared using metal helicates to cross the strands. We found that coordinatively mismatching oligodentate ligands and metal ions provides a more effective way to synthesize larger knots using Vernier templating. Strands composed of different numbers of tridentate 2,6-pyridinedicarboxamide groups fold around nine-coordinate lanthanide (III) ions to generate strand-entangled complexes with the lowest common multiple of coordination sites for the ligand strands and metal ions. Ring-closing olefin metathesis then completes the knots. A 3:2 (ditopic strand:metal) Vernier assembly produces +31#+31 and -31#-31 granny knots. Vernier complexes of 3:4 (tetratopic strand:metal) stoichiometry selectively form a 378-atom-long trefoil-of-trefoils triskelion knot with 12 alternating strand crossings or, by using opposing stereochemistry at the terminus of the strand, an inverted-core triskelion knot with six alternating and six nonalternating strand crossings.
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Affiliation(s)
- Zoe Ashbridge
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK
| | - Elisabeth Kreidt
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK
| | - Lucian Pirvu
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK
| | | | - Joakim Halldin Stenlid
- SUNCAT Center for Interface Science and Catalysis, Department of Chemical Engineering, Stanford University, Stanford, CA 94305, USA.,SUNCAT Center for Interface Science and Catalysis, SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA
| | - Frank Abild-Pedersen
- SUNCAT Center for Interface Science and Catalysis, SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA
| | - David A Leigh
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK.,School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
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11
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Zhang ZH, Andreassen BJ, August DP, Leigh DA, Zhang L. Molecular weaving. NATURE MATERIALS 2022; 21:275-283. [PMID: 35115722 DOI: 10.1038/s41563-021-01179-w] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 11/22/2021] [Indexed: 06/14/2023]
Abstract
Historically, the interlacing of strands at the molecular level has mainly been limited to coordination polymers and DNA. Despite being proposed on a number of occasions, the direct, bottom-up assembly of molecular building blocks into woven organic polymers remained an aspirational, but elusive, target for several decades. However, recent successes in two-dimensional and three-dimensional molecular-level weaving now offer new opportunities and research directions at the interface of polymer science and molecular nanotopology. This Perspective provides an overview of the features and potential of the periodic nanoscale weaving of polymer chains, distinguishing it from randomly entangled polymer networks and rigid crystalline frameworks. We review the background and experimental progress so far, and conclude by considering the potential of molecular weaving and outline some of the current and future challenges in this emerging field.
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Affiliation(s)
- Zhi-Hui Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China
| | | | - David P August
- Department of Chemistry, University of Manchester, Manchester, UK
| | - David A Leigh
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China.
- Department of Chemistry, University of Manchester, Manchester, UK.
| | - Liang Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China.
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12
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Xu GT, Chang XY, Low KH, Wu LL, Wan Q, Shu HX, To WP, Huang JS, Che CM. Self‐Assembly of Molecular Trefoil Knots Featuring Pentadecanuclear Homoleptic AuI‐, AuI/AgI‐, or AuI/CuI‐Alkynyl Coordination. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202200748] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Xiao-Yong Chang
- Southern University of Science and Technology Chemistry CHINA
| | | | | | - Qingyun Wan
- The University of Hong Kong Chemistry HONG KONG
| | | | - Wai-Pong To
- The University of Hong Kong Chemistry HONG KONG
| | | | - Chi-Ming Che
- The University of Hong Kong Pokfulam Road - Hong Kong HONG KONG
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13
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Affiliation(s)
- Arthur H. G. David
- Department of Chemistry Northwestern University Evanston Illinois 60208 United States
| | - J. Fraser Stoddart
- Department of Chemistry Northwestern University Evanston Illinois 60208 United States
- School of Chemistry University of New South Wales Sydney NSW 2052 Australia
- Stoddart Institute of Molecular Science Department of Chemistry Zhejiang University Hangzhou 310021 China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center Hangzhou 311215 China
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14
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Lloyd Williams OH, Rijs NJ. Reaction Monitoring and Structural Characterisation of Coordination Driven Self-Assembled Systems by Ion Mobility-Mass Spectrometry. Front Chem 2021; 9:682743. [PMID: 34169059 PMCID: PMC8217442 DOI: 10.3389/fchem.2021.682743] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Accepted: 05/14/2021] [Indexed: 01/03/2023] Open
Abstract
Nature creates exquisite molecular assemblies, required for the molecular-level functions of life, via self-assembly. Understanding and harnessing these complex processes presents an immense opportunity for the design and fabrication of advanced functional materials. However, the significant industrial potential of self-assembly to fabricate highly functional materials is hampered by a lack of knowledge of critical reaction intermediates, mechanisms, and kinetics. As we move beyond the covalent synthetic regime, into the domain of non-covalent interactions occupied by self-assembly, harnessing and embracing complexity is a must, and non-targeted analyses of dynamic systems are becoming increasingly important. Coordination driven self-assembly is an important subtype of self-assembly that presents several wicked analytical challenges. These challenges are "wicked" due the very complexity desired confounding the analysis of products, intermediates, and pathways, therefore limiting reaction optimisation, tuning, and ultimately, utility. Ion Mobility-Mass Spectrometry solves many of the most challenging analytical problems in separating and analysing the structure of both simple and complex species formed via coordination driven self-assembly. Thus, due to the emerging importance of ion mobility mass spectrometry as an analytical technique tackling complex systems, this review highlights exciting recent applications. These include equilibrium monitoring, structural and dynamic analysis of previously analytically inaccessible complex interlinked structures and the process of self-sorting. The vast and largely untapped potential of ion mobility mass spectrometry to coordination driven self-assembly is yet to be fully realised. Therefore, we also propose where current analytical approaches can be built upon to allow for greater insight into the complexity and structural dynamics involved in self-assembly.
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Affiliation(s)
| | - Nicole J. Rijs
- School of Chemistry, UNSW Sydney, Sydney, NSW, Australia
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15
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Carpenter JP, McTernan CT, Greenfield JL, Lavendomme R, Ronson TK, Nitschke JR. Controlling the shape and chirality of an eight-crossing molecular knot. Chem 2021. [DOI: 10.1016/j.chempr.2021.03.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16
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Leigh DA, Danon JJ, Fielden SDP, Lemonnier JF, Whitehead GFS, Woltering SL. A molecular endless (7 4) knot. Nat Chem 2021; 13:117-122. [PMID: 33318672 DOI: 10.1038/s41557-020-00594-x] [Citation(s) in RCA: 62] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 10/23/2020] [Indexed: 01/30/2023]
Abstract
Current strategies for the synthesis of molecular knots focus on twisting, folding and/or threading molecular building blocks. Here we report that Zn(II) or Fe(II) ions can be used to weave ligand strands to form a woven 3 × 3 molecular grid. We found that the process requires tetrafluoroborate anions to template the assembly of the interwoven grid by binding within the square cavities formed between the metal-coordinated criss-crossed ligands. The strand ends of the grid can subsequently be joined through within-grid alkene metathesis reactions to form a topologically trivial macrocycle (unknot), a doubly interlocked [2]catenane (Solomon link) and a knot with seven crossings in a 258-atom-long closed loop. This 74 knot topology corresponds to that of an endless knot, which is a basic motif of Celtic interlace, the smallest Chinese knot and one of the eight auspicious symbols of Buddhism and Hinduism. The weaving of molecular strands within a discrete layer by anion-template metal-ion coordination opens the way for the synthesis of other molecular knot topologies and to woven polymer materials.
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Affiliation(s)
- David A Leigh
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China. .,Department of Chemistry, University of Manchester, Manchester, UK.
| | - Jonathan J Danon
- Department of Chemistry, University of Manchester, Manchester, UK
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17
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Non‐Covalent Interaction‐Directed Coordination‐Driven Self‐Assembly of Non‐Trivial Supramolecular Topologies. CHEM REC 2021; 21:574-593. [DOI: 10.1002/tcr.202000155] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2020] [Revised: 12/22/2020] [Accepted: 01/11/2021] [Indexed: 11/07/2022]
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18
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Shi J, Li Y, Jiang X, Yu H, Li J, Zhang H, Trainer DJ, Hla SW, Wang H, Wang M, Li X. Self-Assembly of Metallo-Supramolecules with Dissymmetrical Ligands and Characterization by Scanning Tunneling Microscopy. J Am Chem Soc 2021; 143:1224-1234. [PMID: 33395279 DOI: 10.1021/jacs.0c12508] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Asymmetrical and dissymmetrical structures are widespread and play a critical role in nature and life systems. In the field of metallo-supramolecular assemblies, it is still in its infancy for constructing artificial architectures using dissymmetrical building blocks. Herein, we report the self-assembly of supramolecular systems based on two dissymmetrical double-layered ligands. With the aid of ultra-high-vacuum, low-temperature scanning tunneling microscopy (UHV-LT-STM), we were able to investigate four isomeric structures corresponding to four types of binding modes of ligand LA with two major conformations complexes A. The distribution of isomers measured by STM and total binding energy of each isomer obtained by density functional theory (DFT) calculations suggested that the most abundant isomer could be the most stable one with highest total binding energy. Finally, through shortening the linker between inner and outer layers and the length of arms, the arrangement of dissymmetrical ligand LB could be controlled within one binding mode corresponding to the single conformation for complexes B.
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Affiliation(s)
- Junjuan Shi
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin 130012, China.,College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China
| | - Yiming Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China.,Department of Chemistry, University of South Florida, Tampa, Florida 33620, United States
| | - Xin Jiang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin 130012, China
| | - Hao Yu
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin 130012, China
| | - Jiaqi Li
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin 130012, China
| | - Houyu Zhang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin 130012, China
| | - Daniel J Trainer
- Nanoscience and Technology Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Saw Wai Hla
- Nanoscience and Technology Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Heng Wang
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China
| | - Ming Wang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, Jilin 130012, China
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518055, China.,Shenzhen University General Hospital, Clinical Medical Academy, Shenzhen University, Shenzhen, Guangdong 518055, China
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19
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Song Y, Schaufelberger F, Ashbridge Z, Pirvu L, Vitorica-Yrezabal IJ, Leigh DA. Effects of turn-structure on folding and entanglement in artificial molecular overhand knots. Chem Sci 2020; 12:1826-1833. [PMID: 34163946 PMCID: PMC8179330 DOI: 10.1039/d0sc05897a] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
The length and constitution of spacers linking three 2,6-pyridinedicarboxamide units in a molecular strand influence the tightness of the resulting overhand (open-trefoil) knot that the strand folds into in the presence of lanthanide(iii) ions. The use of β-hairpin forming motifs as linkers enables a metal-coordinated pseudopeptide with a knotted tertiary structure to be generated. The resulting pseudopeptide knot has one of the highest backbone-to-crossing ratios (BCR)—a measure of knot tightness (a high value corresponding to looseness)—for a synthetic molecular knot to date. Preorganization in the crossing-free turn section of the knot affects aromatic stacking interactions close to the crossing region. The metal-coordinated pseudopeptide knot is compared to overhand knots with other linkers of varying tightness and turn preorganization, and the entangled architectures characterized by NMR spectroscopy, ESI-MS, CD spectroscopy and, in one case, X-ray crystallography. The results show how it is possible to program specific conformational properties into different key regions of synthetic molecular knots, opening the way to systems where knotting can be systematically incorporated into peptide-like chains through design. Spacers linking 2,6-pyridinedicarboxamide units influence the tightness of the corresponding lanthanide-coordinated overhand knot. β-Hairpin forming motifs generate a metal-coordinated pseudopeptide with a knotted tertiary structure.![]()
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Affiliation(s)
- Yiwei Song
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University Shanghai 200062 PR China
| | | | - Zoe Ashbridge
- Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
| | - Lucian Pirvu
- Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
| | | | - David A Leigh
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University Shanghai 200062 PR China .,Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
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20
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Dang LL, Feng HJ, Lin YJ, Jin GX. Self-Assembly of Molecular Figure-Eight Knots Induced by Quadruple Stacking Interactions. J Am Chem Soc 2020; 142:18946-18954. [DOI: 10.1021/jacs.0c09162] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Li-Long Dang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Hui-Jun Feng
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
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21
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Margolis EA, Keyes RJ, Lockey SD, Fenlon EE. Design and synthesis of a bis-macrocyclic host and guests as building blocks for small molecular knots. Beilstein J Org Chem 2020; 16:2314-2321. [PMID: 33014171 PMCID: PMC7509378 DOI: 10.3762/bjoc.16.192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2019] [Accepted: 09/02/2020] [Indexed: 11/23/2022] Open
Abstract
The thread–link–cut (TLC) approach has previously shown promise as a novel method to synthesize molecular knots. The modular second-generation approach to small trefoil knots described herein involves electrostatic interactions between an electron-rich bis-macrocyclic host compound and electron-deficient guests in the threading step. The bis-macrocyclic host was synthesized in eight steps and 6.6% overall yield. Ammonium and pyridinium guests were synthesized in 4–5 steps. The TLC knot-forming sequence was carried out and produced a product with the expected molecular weight, but, unfortunately, further characterization did not produce conclusive results regarding the topology of the product.
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Affiliation(s)
- Elizabeth A Margolis
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
| | - Rebecca J Keyes
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
| | - Stephen D Lockey
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
| | - Edward E Fenlon
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
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22
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Abstract
The properties of knots are exploited in a range of applications, from shoelaces to the knots used for climbing, fishing and sailing1. Although knots are found in DNA and proteins2, and form randomly in other long polymer chains3,4, methods for tying5 different sorts of knots in a synthetic nanoscale strand are lacking. Molecular knots of high symmetry have previously been synthesized by using non-covalent interactions to assemble and entangle molecular chains6-15, but in such instances the template and/or strand structure intrinsically determines topology, which means that only one type of knot is usually possible. Here we show that interspersing coordination sites for different metal ions within an artificial molecular strand enables it to be tied into multiple knots. Three topoisomers-an unknot (01) macrocycle, a trefoil (31) knot6-15, and a three-twist (52) knot-were each selectively prepared from the same molecular strand by using transition-metal and lanthanide ions to guide chain folding in a manner reminiscent of the action of protein chaperones16. We find that the metal-ion-induced folding can proceed with stereoinduction: in the case of one knot, a lanthanide(III)-coordinated crossing pattern formed only with a copper(I)-coordinated crossing of particular handedness. In an unanticipated finding, metal-ion coordination was also found to translocate an entanglement from one region of a knotted molecular structure to another, resulting in an increase in writhe (topological strain) in the new knotted conformation. The knot topology affects the chemical properties of the strand: whereas the tighter 52 knot can bind two different metal ions simultaneously, the looser 31 isomer can bind only either one copper(I) ion or one lutetium(III) ion. The ability to tie nanoscale chains into different knots offers opportunities to explore the modification of the structure and properties of synthetic oligomers, polymers and supramolecules.
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23
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Katsonis N, Lancia F, Leigh DA, Pirvu L, Ryabchun A, Schaufelberger F. Knotting a molecular strand can invert macroscopic effects of chirality. Nat Chem 2020; 12:939-944. [DOI: 10.1038/s41557-020-0517-1] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Accepted: 06/25/2020] [Indexed: 11/10/2022]
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24
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Van Raden JM, Jarenwattananon NN, Zakharov LN, Jasti R. Active Metal Template Synthesis and Characterization of a Nanohoop [
c
2]Daisy Chain Rotaxane. Chemistry 2020; 26:10205-10209. [DOI: 10.1002/chem.202001389] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Indexed: 11/10/2022]
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25
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Zhang YW, Bai S, Wang YY, Han YF. A Strategy for the Construction of Triply Interlocked Organometallic Cages by Rational Design of Poly-NHC Precursors. J Am Chem Soc 2020; 142:13614-13621. [DOI: 10.1021/jacs.0c06470] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Ya-Wen Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710127, P. R. China
| | - Sha Bai
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710127, P. R. China
| | - Yao-Yu Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710127, P. R. China
| | - Ying-Feng Han
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi’an 710127, P. R. China
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26
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Baghery S, Zarei M, Zolfigol MA, Mallakpour S, Behranvand V. Application of trityl moieties in chemical processes: part I. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY 2020. [DOI: 10.1007/s13738-020-01980-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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27
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Alcântara AFP, Fontana LA, Almeida MP, Rigolin VH, Ribeiro MA, Barros WP, Megiatto JD. Control over the Redox Cooperative Mechanism of Radical Carbene Transfer Reactions for the Efficient Active‐Metal‐Template Synthesis of [2]Rotaxanes. Chemistry 2020; 26:7808-7822. [DOI: 10.1002/chem.201905602] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2019] [Indexed: 02/01/2023]
Affiliation(s)
- Arthur F. P. Alcântara
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
- Instituto Federal do Sertão Pernambucano Estrada do Tamboril 56200-000 Ouricuri Brazil
| | - Liniquer A. Fontana
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Marlon P. Almeida
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Vitor H. Rigolin
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Marcos A. Ribeiro
- Departamento de QuímicaUniversidade Federal do Espírito Santo Av. Fernando Ferrari, 514 29075-910 Vitória Brazil
| | - Wdeson P. Barros
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Jackson D. Megiatto
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
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28
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Singh J, Kim DH, Kim EH, Kim H, Hadiputra R, Jung J, Chi KW. The First Quantitative Synthesis of a Closed Three-Link Chain (613) Using Coordination and Noncovalent Interactions-Driven Self-Assembly. J Am Chem Soc 2020; 142:9327-9336. [DOI: 10.1021/jacs.0c01406] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Jatinder Singh
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
- Energy Materials Laboratory, Korea Institute of Energy Research, Daejeon 34129, Republic of Korea
| | - Dong Hwan Kim
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Eun-Hee Kim
- Center for Research Equipments, Korea Basic Science Institute, Ochang, Chungbuk 28119, Republic of Korea
| | - Hyunuk Kim
- Energy Materials Laboratory, Korea Institute of Energy Research, Daejeon 34129, Republic of Korea
| | - Rizky Hadiputra
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Jaehoon Jung
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Ki-Whan Chi
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
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29
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He L, Wang SC, Lin LT, Cai JY, Li L, Tu TH, Chan YT. Multicomponent Metallo-Supramolecular Nanocapsules Assembled from Calix[4]resorcinarene-Based Terpyridine Ligands. J Am Chem Soc 2020; 142:7134-7144. [PMID: 32150683 DOI: 10.1021/jacs.0c01482] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Tetrafunctionalized calix[4]resorcinarene cavitands commonly serve as supramolecular scaffolds for construction of coordination-driven self-assembled capsules. However, due to the calix-like shape, the structural diversity of assemblies is mostly restricted to dimeric and hexameric capsules. Previously, we reported a spontaneous heteroleptic complexation strategy based on a pair of self-recognizable terpyridine-based ligands and CdII ions. Building on this complementary ligand pairing system, herein three types of nanocapsules, including a dimeric capsule, a Sierpiński triangular prism, and a cubic star, could be readily obtained through dynamic complexation reactions between a tetratopic cavitand-based ligand and various multitopic counterparts in the presence of CdII ions. The dimeric capsular assemblies display the spacer-length-dependent self-sorting behavior in a four-component system. Moreover, the precise multicomponent self-assembly of a Sierpiński triangular prism and a cubic star possessing three and six cavitand-based motifs, respectively, demonstrates that such self-assembly methodology is able to efficiently enhance architectural complexity for calix[4]resorcinarene-containing metallo-supramolecules.
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Affiliation(s)
- Lipeng He
- Department of Chemistry, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan
| | - Shi-Cheng Wang
- Department of Chemistry, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan
| | - Lin-Ting Lin
- Department of Chemistry, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan
| | - Jhen-Yu Cai
- Department of Chemistry, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan
| | - Lijie Li
- Department of Chemistry, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan
| | - Tsung-Han Tu
- Department of Chemistry, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan
| | - Yi-Tsu Chan
- Department of Chemistry, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan
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30
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Nandi M, Bej S, Bhunia S, Ghosh P. Template Directed Syntheses of Electrochemically Active [2]Rotaxanes: Anion Binding and Redox Studies. ChemElectroChem 2020. [DOI: 10.1002/celc.201901655] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Mandira Nandi
- School of Chemical SciencesIndian Association for the Cultivation of Science 2 A & 2B Raja S. C. Mullick Road Kolkata 700032 India
| | - Somnath Bej
- School of Chemical SciencesIndian Association for the Cultivation of Science 2 A & 2B Raja S. C. Mullick Road Kolkata 700032 India
| | - Sarmistha Bhunia
- School of Chemical SciencesIndian Association for the Cultivation of Science 2 A & 2B Raja S. C. Mullick Road Kolkata 700032 India
| | - Pradyut Ghosh
- School of Chemical SciencesIndian Association for the Cultivation of Science 2 A & 2B Raja S. C. Mullick Road Kolkata 700032 India
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31
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Dang LL, Gao X, Lin YJ, Jin GX. s-Block metal ions induce structural transformations between figure-eight and double trefoil knots. Chem Sci 2020. [DOI: 10.1039/c9sc05796j] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The presence or absence of s-block metal ions induces reversible structural transformation of molecular knots.
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Affiliation(s)
- Li-Long Dang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Department of Chemistry
- Fudan University
- Shanghai 200438
| | - Xiang Gao
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Department of Chemistry
- Fudan University
- Shanghai 200438
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Department of Chemistry
- Fudan University
- Shanghai 200438
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Department of Chemistry
- Fudan University
- Shanghai 200438
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32
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Preparation and properties of polystyrene/silica fibres flexible thermal insulation materials by centrifugal spinning. POLYMER 2019. [DOI: 10.1016/j.polymer.2019.121964] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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33
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Zhong J, Zhang L, August DP, Whitehead GFS, Leigh DA. Self-Sorting Assembly of Molecular Trefoil Knots of Single Handedness. J Am Chem Soc 2019; 141:14249-14256. [PMID: 31389229 DOI: 10.1021/jacs.9b06127] [Citation(s) in RCA: 54] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We report on the stereoselective synthesis of trefoil knots of single topological handedness in up to 90% yield (over two steps) through the formation of trimeric circular helicates from ligand strands containing either imine or, unexpectedly, amide chelating units and metal ion templates of the appropriate coordination character (zinc(II) for imines; cobalt(III) for amides). The coordination stereochemistry of the octahedral metal complexes is determined by asymmetric carbon centers in the strands, ultimately translating into trefoil knots that are a single enantiomer, both physically and in terms of their fundamental topology. Both the imine-zinc and amide-cobalt systems display self-sorting behavior, with racemic ligands forming knots that individually contain only building blocks of the same chirality. The knots and the corresponding trimeric circular helicate intermediates (Zn(II)3 complex for the imine ligands; Co(III)3 complex for the amide ligands) were characterized by nuclear magnetic resonance spectroscopy, mass spectrometry, and X-ray crystallography. The latter confirms the trefoil knots as 84-membered macrocycles, with each of the metal ions sited at a crossing point for three regions of the strand. The stereochemistry of the octahedral coordination centers imparts alternating crossings of the same handedness within each circular helicate. The expression of chirality of the knotted molecules was probed by circular dichroism: The topological handedness of the demetalated knots was found to have a greater effect on the CD response than the Euclidean chirality of an individual chiral center.
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Affiliation(s)
- Jiankang Zhong
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - Liang Zhang
- School of Chemistry and Molecular Engineering , East China Normal University , 200062 Shanghai , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - David P August
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - George F S Whitehead
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - David A Leigh
- School of Chemistry and Molecular Engineering , East China Normal University , 200062 Shanghai , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
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34
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Echavarren J, Gall MAY, Haertsch A, Leigh DA, Marcos V, Tetlow DJ. Active template rotaxane synthesis through the Ni-catalyzed cross-coupling of alkylzinc reagents with redox-active esters. Chem Sci 2019; 10:7269-7273. [PMID: 31588296 PMCID: PMC6686731 DOI: 10.1039/c9sc02457c] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2019] [Accepted: 06/15/2019] [Indexed: 12/24/2022] Open
Abstract
The synthesis of unsymmetrical axle [2]rotaxanes through a recently developed Ni-catalyzed C(sp3)-C(sp3) cross-coupling of redox-active esters (formed directly from carboxylic acids) and organozinc reagents (derived from alkyl bromides) is reported. The method also furnishes, as a minor product, the symmetrical axle [2]rotaxanes resulting from the homo-coupling of the organozinc half-thread. The rotaxanes are formed in up to 56% yield with the ratio of unsymmetrical rotaxane increasing with the cavity size of the macrocycle. In the absence of the redox-active ester neither rotaxane is formed, even though the homo-coupling rotaxane product does not incorporate the redox-active ester building block. A Ni(iii) intermediate is consistent with these observations, providing support for the previously postulated mechanism of the Ni-catalyzed cross-coupling reaction.
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Affiliation(s)
- Javier Echavarren
- School of Chemistry , University of Manchester , Oxford Road , Manchester , M13 9PL , UK .
| | - Malcolm A Y Gall
- School of Chemistry , University of Manchester , Oxford Road , Manchester , M13 9PL , UK .
| | - Adrian Haertsch
- School of Chemistry , University of Manchester , Oxford Road , Manchester , M13 9PL , UK .
| | - David A Leigh
- School of Chemistry , University of Manchester , Oxford Road , Manchester , M13 9PL , UK .
| | - Vanesa Marcos
- School of Chemistry , University of Manchester , Oxford Road , Manchester , M13 9PL , UK .
| | - Daniel J Tetlow
- School of Chemistry , University of Manchester , Oxford Road , Manchester , M13 9PL , UK .
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35
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Wang H, Li Y, Yu H, Song B, Lu S, Hao XQ, Zhang Y, Wang M, Hla SW, Li X. Combining Synthesis and Self-Assembly in One Pot To Construct Complex 2D Metallo-Supramolecules Using Terpyridine and Pyrylium Salts. J Am Chem Soc 2019; 141:13187-13195. [PMID: 31345024 DOI: 10.1021/jacs.9b05682] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Multicomponent self-assembly in one pot provides an efficient way for constructing complex architectures using multiple types of building blocks with different levels of interactions orthogonally. The preparation of multiple types of building blocks typically includes tedious synthesis. Here, we developed a multicomponent synthesis/self-assembly strategy, which combined covalent interaction (C-N bond, formed through condensation of pyrylium salt with primary amine) and metal-ligand interaction (N → Zn bond, formed through 2,2':6',2″-terpyridine-Zn coordination) in one pot. The high compatibility of this pair of interactions smoothly and efficiently converted three and four types of components into the desired complex structures, which are supramolecular Kandinsky Circles and spiderwebs, respectively.
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Affiliation(s)
- Heng Wang
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
| | - Yiming Li
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
| | - Hao Yu
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry , Jilin University , Changchun , Jilin 130012 , China
| | - Bo Song
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
| | - Shuai Lu
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States.,College of Chemistry and Molecular Engineering , Zhengzhou University , Zhengzhou , Henan 450001 , China
| | - Xin-Qi Hao
- College of Chemistry and Molecular Engineering , Zhengzhou University , Zhengzhou , Henan 450001 , China
| | - Yuan Zhang
- Nanoscience and Technology Division , Argonne National Laboratory , Lemont , Illinois 60439 , United States
| | - Ming Wang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry , Jilin University , Changchun , Jilin 130012 , China
| | - Saw-Wai Hla
- Nanoscience and Technology Division , Argonne National Laboratory , Lemont , Illinois 60439 , United States
| | - Xiaopeng Li
- Department of Chemistry , University of South Florida , Tampa , Florida 33620 , United States
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36
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Coordination-driven self-assembly of a molecular figure-eight knot and other topologically complex architectures. Nat Commun 2019; 10:2057. [PMID: 31053709 PMCID: PMC6499799 DOI: 10.1038/s41467-019-10075-6] [Citation(s) in RCA: 52] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2018] [Accepted: 04/08/2019] [Indexed: 11/10/2022] Open
Abstract
Over the past decades, molecular knots and links have captivated the chemical community due to their promising mimicry properties in molecular machines and biomolecules and are being realized with increasing frequency with small molecules. Herein, we describe how to utilize stacking interactions and hydrogen-bonding patterns to form trefoil knots, figure-eight knots and [2]catenanes. A transformation can occur between the unique trefoil knot and its isomeric boat-shaped tetranuclear macrocycle by the complementary concentration effect. Remarkably, the realization and authentication of the molecular figure-eight knot with four crossings fills the blank about 41 knot in knot tables. The [2]catenane topology is obtained because the selective naphthalenediimide (NDI)-based ligand, which can engender favorable aromatic donor-acceptor π interactions due to its planar, electron-deficient aromatic surface. The stacking interactions and hydrogen-bond interactions play important roles in these self-assembly processes. The advantages provide an avenue for the generation of structurally and topologically complex supramolecular architectures. Molecular knots and links continue to fascinate synthetic chemists. Here, the authors use stacking and hydrogen-bonding interactions between a set of similar building blocks to construct several complex molecular topologies, including a figure-eight knot and a trefoil knot.
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37
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McTernan CT, Ronson TK, Nitschke JR. Post-assembly Modification of Phosphine Cages Controls Host–Guest Behavior. J Am Chem Soc 2019; 141:6837-6842. [DOI: 10.1021/jacs.9b02604] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Charlie T. McTernan
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
| | - Tanya K. Ronson
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
| | - Jonathan R. Nitschke
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
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38
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Leigh DA, Pirvu L, Schaufelberger F. Stereoselective Synthesis of Molecular Square and Granny Knots. J Am Chem Soc 2019; 141:6054-6059. [PMID: 30892025 PMCID: PMC6492950 DOI: 10.1021/jacs.9b01819] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
![]()
We
report on the stereoselective synthesis of both molecular granny
and square knots through the use of lanthanide-complexed overhand
knots of specific handedness as three-crossing “entanglement
synthons”. The composite knots are assembled by combining two
entanglement synthons (of the same chirality for a granny knot; of
opposite handedness for a square knot) in three synthetic steps: first,
a CuAAC reaction joins together one end of each overhand knot. Ring-closing
olefin metathesis (RCM) then affords the closed-loop knot, locking
the topology. This allows the lanthanide ions necessary for stabilizing
the entangled conformation of the synthons to subsequently be removed.
The composite knots were characterized by 1H and 13C NMR spectroscopy and mass spectrometry and the chirality of the
knot stereoisomers compared by circular dichroism. The synthetic strategy
of combining building blocks of defined stereochemistry (here overhand
knots of Λ- or Δ-handed entanglement) is reminiscent of
the chiron approach of using minimalist chiral synthons in the stereoselective
synthesis of molecules with multiple asymmetric centers.
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Affiliation(s)
- David A Leigh
- School of Chemistry , University of Manchester , Oxford Road , Manchester M13 9PL , U.K
| | - Lucian Pirvu
- School of Chemistry , University of Manchester , Oxford Road , Manchester M13 9PL , U.K
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39
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Modicom F, Jamieson EMG, Rochette E, Goldup SM. Chemical Consequences of the Mechanical Bond: A Tandem Active Template-Rearrangement Reaction. Angew Chem Int Ed Engl 2019; 58:3875-3879. [PMID: 30600892 PMCID: PMC6589916 DOI: 10.1002/anie.201813950] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2018] [Indexed: 01/07/2023]
Abstract
We report the unexpected discovery of a tandem active template CuAAC-rearrangement process, in which N2 is extruded on the way to the 1,2,3-triazole product to give instead acrylamide rotaxanes. Mechanistic investigations suggest this process is dictated by the mechanical bond, which stabilizes the CuI -triazolide intermediate of the CuAAC reaction and diverts it down the rearrangement pathway; when no mechanical bond is formed, the CuAAC product is isolated.
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Affiliation(s)
- Florian Modicom
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
| | | | - Elise Rochette
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
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40
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Zhang L, Stephens AJ, Lemonnier JF, Pirvu L, Vitorica-Yrezabal IJ, Robinson CJ, Leigh DA. Coordination Chemistry of a Molecular Pentafoil Knot. J Am Chem Soc 2019; 141:3952-3958. [PMID: 30742430 PMCID: PMC6438588 DOI: 10.1021/jacs.8b12548] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
The binding of Zn(II) cations to
a pentafoil (51) knotted
ligand allows the synthesis of otherwise inaccessible metalated molecular
pentafoil knots via transmetalation, affording the corresponding “first-sphere”
coordination Co(II), Ni(II), and Cu(II) pentanuclear knots in good
yields (≥85%). Each of the knot complexes was characterized
by mass spectrometry, the diamagnetic (zinc) knot complex was characterized
by 1H and 13C NMR spectroscopy, and the zinc,
cobalt, and nickel pentafoil knots afforded single crystals whose
structures were determined by X-ray crystallography. Lehn-type circular
helicates generally only form with tris-bipy ligand strands and Fe(II)
(and, in some cases, Ni(II) and Zn(II)) salts, so such architectures
become accessible for other metal cations only through the use of
knotted ligands. The different metalated knots all exhibit “second-sphere”
coordination of a single chloride ion within the central cavity of
the knot through CH···Cl– hydrogen
bonding and electrostatic interactions. The chloride binding affinities
were determined in MeCN by isothermal titration calorimetry, and the
strength of binding was shown to vary over 3 orders of magnitude for
the different metal-ion–knotted-ligand second-sphere coordination
complexes.
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Affiliation(s)
- Liang Zhang
- School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - Alexander J Stephens
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | | | - Lucian Pirvu
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | | | - Christopher J Robinson
- SYNBIOCHEM, Manchester Institute of Biotechnology , University of Manchester , Manchester M1 7DN , United Kingdom
| | - David A Leigh
- School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
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41
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Modicom F, Jamieson EMG, Rochette E, Goldup SM. Chemical Consequences of the Mechanical Bond: A Tandem Active Template‐Rearrangement Reaction. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201813950] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Florian Modicom
- ChemistryUniversity of Southampton, Highfield Southampton SO17 1BJ UK
| | | | - Elise Rochette
- ChemistryUniversity of Southampton, Highfield Southampton SO17 1BJ UK
| | - Stephen M. Goldup
- ChemistryUniversity of Southampton, Highfield Southampton SO17 1BJ UK
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42
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Li B, He T, Fan Y, Yuan X, Qiu H, Yin S. Recent developments in the construction of metallacycle/metallacage-cored supramolecular polymers via hierarchical self-assembly. Chem Commun (Camb) 2019; 55:8036-8059. [PMID: 31206102 DOI: 10.1039/c9cc02472g] [Citation(s) in RCA: 65] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Supramolecular polymers have received considerable attention during the last few decades due to their scientific value in polymer chemistry and profound implications for future developments of advanced materials. Discrete supramolecular coordination complexes (SCCs) with well-defined size, shape, and geometry have been widely employed to construct hierarchical systems by coordination-driven self-assembly with the spontaneous formation of metal-ligand bonds, which results in the formation of well-defined two-dimensional (2D) metallacycles or three-dimensional (3D) metallacages with high functionalities. The incorporation of discrete SCCs into supramolecular polymers by the orthogonal combination of metal-ligand coordination and other noncovalent interactions or covalent bonding could further facilitate the construction of novel supramolecular polymers with hierarchical architectures and multiple functions including controllable uptake and release of guest molecules, providing a flexible platform for the development of smart materials. In this review, the recent progress in metallacycle/metallacage-cored supramolecular polymers that were constructed by the combination of metal-ligand interactions and other orthogonal interactions (including hydrophobic or hydrophilic interactions, hydrogen bonding, van der Waals forces, π-π stacking, electrostatic interactions, host-guest interactions and covalent bonding) has been discussed. In addition, the potential applications of metallacycle/metallacage-cored supramolecular polymers in the areas of light emitting, sensing, bio-imaging, delivery and release, etc., are also presented.
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Affiliation(s)
- Bo Li
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, P. R. China.
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43
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Zhang L, Stephens AJ, Nussbaumer AL, Lemonnier JF, Jurček P, Vitorica-Yrezabal IJ, Leigh DA. Stereoselective synthesis of a composite knot with nine crossings. Nat Chem 2018; 10:1083-1088. [DOI: 10.1038/s41557-018-0124-6] [Citation(s) in RCA: 90] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2018] [Accepted: 07/20/2018] [Indexed: 01/10/2023]
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44
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Prusty S, Podh MB, Purohit CS. A Molecular Figure of Eight: Synthesis and Characterization. ChemistrySelect 2018. [DOI: 10.1002/slct.201801982] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Sidheswari Prusty
- School of Chemical Science; National Institute of Science Education and Research, (NISER),Bhubaneswar, Jatni; Khurda 752050 Odisha India
- Homi Bhabha National Institute, Mumbai; India
| | - Mana Bhanjan Podh
- School of Chemical Science; National Institute of Science Education and Research, (NISER),Bhubaneswar, Jatni; Khurda 752050 Odisha India
- Homi Bhabha National Institute, Mumbai; India
| | - Chandra Shekhar Purohit
- School of Chemical Science; National Institute of Science Education and Research, (NISER),Bhubaneswar, Jatni; Khurda 752050 Odisha India
- Homi Bhabha National Institute, Mumbai; India
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45
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Leigh DA, Pirvu L, Schaufelberger F, Tetlow DJ, Zhang L. Securing a Supramolecular Architecture by Tying a Stopper Knot. Angew Chem Int Ed Engl 2018; 57:10484-10488. [PMID: 29708636 PMCID: PMC6099318 DOI: 10.1002/anie.201803871] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2018] [Indexed: 11/11/2022]
Abstract
We report on a rotaxane-like architecture secured by the in situ tying of an overhand knot in the tris(2,6-pyridyldicarboxamide) region of the axle through complexation with a lanthanide ion (Lu3+ ). The increase in steric bulk caused by the knotting locks a crown ether onto the thread. Removal of the lutetium ion unties the knot, and when the axle binding site for the ring is deactivated, the macrocycle spontaneously dethreads. When the binding interaction is switched on again, the crown ether rethreads over the 10 nm length of the untangled strand. The overhand knot can be retied, relocking the threaded structure, by once again adding lutetium ions.
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Affiliation(s)
- David A. Leigh
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
| | - Lucian Pirvu
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
| | | | - Daniel J. Tetlow
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
| | - Liang Zhang
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
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46
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Leigh DA, Pirvu L, Schaufelberger F, Tetlow DJ, Zhang L. Securing a Supramolecular Architecture by Tying a Stopper Knot. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201803871] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- David A. Leigh
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
| | - Lucian Pirvu
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
| | | | - Daniel J. Tetlow
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
| | - Liang Zhang
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
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47
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Jamieson EMG, Modicom F, Goldup SM. Chirality in rotaxanes and catenanes. Chem Soc Rev 2018; 47:5266-5311. [PMID: 29796501 PMCID: PMC6049620 DOI: 10.1039/c8cs00097b] [Citation(s) in RCA: 187] [Impact Index Per Article: 31.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Indexed: 12/20/2022]
Abstract
Although chiral mechanically interlocked molecules (MIMs) have been synthesised and studied, enantiopure examples are relatively under-represented in the pantheon of reported catenanes and rotaxanes and the underlying chirality of the system is often even overlooked. This is changing with the advent of new applications of MIMs in catalysis, sensing and materials and the appearance of new methods to access unusual stereogenic units unique to the mechanical bond. Here we discuss the different stereogenic units that have been investigated in catenanes and rotaxanes, examples of their application, methods for assigning absolute stereochemistry and provide a perspective on future developments.
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Affiliation(s)
- E. M. G. Jamieson
- Chemistry
, University of Southampton
,
University Road, Highfield
, Southampton
, SO17 1BJ
, UK
.
| | - F. Modicom
- Chemistry
, University of Southampton
,
University Road, Highfield
, Southampton
, SO17 1BJ
, UK
.
| | - S. M. Goldup
- Chemistry
, University of Southampton
,
University Road, Highfield
, Southampton
, SO17 1BJ
, UK
.
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48
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Denis M, Qin L, Turner P, Jolliffe KA, Goldup SM. A Fluorescent Ditopic Rotaxane Ion-Pair Host. Angew Chem Int Ed Engl 2018; 57:5315-5319. [PMID: 29393993 PMCID: PMC5947583 DOI: 10.1002/anie.201713105] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Indexed: 12/21/2022]
Abstract
We report a rotaxane based on a simple urea motif that binds Cl- selectively as a separated ion pair with H+ and reports the anion binding event through a fluorescence switch-on response. The host selectively binds Cl- over more basic anions, which deprotonate the framework, and less basic anions, which bind more weakly. The mechanical bond also imparts size selectivity to the ditopic host.
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Affiliation(s)
- Mathieu Denis
- ChemistryUniversity of SouthamptonHighfieldSouthamptonSO17 1BJUK
| | - Lei Qin
- School of ChemistryThe University of SydneySydneyNSW2006Australia
| | - Peter Turner
- School of ChemistryThe University of SydneySydneyNSW2006Australia
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49
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Denis M, Pancholi J, Jobe K, Watkinson M, Goldup SM. Chelating Rotaxane Ligands as Fluorescent Sensors for Metal Ions. Angew Chem Int Ed Engl 2018; 57:5310-5314. [PMID: 29537728 PMCID: PMC5947674 DOI: 10.1002/anie.201712931] [Citation(s) in RCA: 68] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Indexed: 01/08/2023]
Abstract
Although metal-ion-binding interlocked molecules have been under intense investigation for over three decades, their application as scaffolds for the development of sensors for metal ions remains underexplored. In this work, we demonstrate the potential of simple rotaxanes as metal-ion-responsive ligand scaffolds through the development of a proof-of-concept selective sensor for Zn2+ .
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Affiliation(s)
- Mathieu Denis
- ChemistryUniversity of SouthamptonHighfieldSouthamptonSO17 1BJUK
| | - Jessica Pancholi
- School of Biological and Chemical SciencesQueen Mary University of LondonMile End RoadLondonE1 4NSUK
| | - Kajally Jobe
- School of Biological and Chemical SciencesQueen Mary University of LondonMile End RoadLondonE1 4NSUK
| | - Michael Watkinson
- School of Biological and Chemical SciencesQueen Mary University of LondonMile End RoadLondonE1 4NSUK
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50
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Bloch WM, Holstein JJ, Dittrich B, Hiller W, Clever GH. Hierarchical Assembly of an Interlocked M 8 L 16 Container. Angew Chem Int Ed Engl 2018; 57:5534-5538. [PMID: 29392809 PMCID: PMC5947565 DOI: 10.1002/anie.201800490] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Indexed: 01/01/2023]
Abstract
The self-assembly of eight PdII cations and sixteen phenanthrene-derived bridging ligands with 60° bite angles yielded a novel M8 L16 metallosupramolecular architecture composed of two interlocked D4h -symmetric barrel-shaped containers. Mass spectrometry, NMR spectroscopy, and X-ray analysis revealed this self-assembled structure to be a very large "Hopf link" catenane featuring channel-like cavities, which are occupied by NO3- anions. The importance of the anions as catenation templates became imminent when we observed the nitrate-triggered structural rearrangement of a mixture of M3 L6 and M4 L8 assemblies formed in the presence of BF4- anions into the same interlocked molecule. Furthermore, the densely packed structure of the M8 L16 catenane was exploited in the preparation of a hexyloxy-functionalized analogue, which further self-assembled into vesicle-like aggregates in a reversible manner.
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Affiliation(s)
- Witold M. Bloch
- Department of Chemistry and Chemical BiologyTU Dortmund UniversityOtto-Hahn-Straße 644227DortmundGermany
- Department of Chemistry and Centre for Advanced NanomaterialsSchool of Physical SciencesThe University of AdelaideAdelaideAustralia
| | - Julian J. Holstein
- Department of Chemistry and Chemical BiologyTU Dortmund UniversityOtto-Hahn-Straße 644227DortmundGermany
| | - Birger Dittrich
- Institute for Inorganic Chemistry and Structural ChemistryHeinrich-Heine University DüsseldorfUniversitätsstraße 140225DüsseldorfGermany
| | - Wolf Hiller
- Department of Chemistry and Chemical BiologyTU Dortmund UniversityOtto-Hahn-Straße 644227DortmundGermany
| | - Guido H. Clever
- Department of Chemistry and Chemical BiologyTU Dortmund UniversityOtto-Hahn-Straße 644227DortmundGermany
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