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Ariga K, Song J, Kawakami K. Molecular machines working at interfaces: physics, chemistry, evolution and nanoarchitectonics. Phys Chem Chem Phys 2024; 26:13532-13560. [PMID: 38654597 DOI: 10.1039/d4cp00724g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
As a post-nanotechnology concept, nanoarchitectonics combines nanotechnology with advanced materials science. Molecular machines made by assembling molecular units and their organizational bodies are also products of nanoarchitectonics. They can be regarded as the smallest functional materials. Originally, studies on molecular machines analyzed the average properties of objects dispersed in solution by spectroscopic methods. Researchers' playgrounds partially shifted to solid interfaces, because high-resolution observation of molecular machines is usually done on solid interfaces under high vacuum and cryogenic conditions. Additionally, to ensure the practical applicability of molecular machines, operation under ambient conditions is necessary. The latter conditions are met in dynamic interfacial environments such as the surface of water at room temperature. According to these backgrounds, this review summarizes the trends of molecular machines that continue to evolve under the concept of nanoarchitectonics in interfacial environments. Some recent examples of molecular machines in solution are briefly introduced first, which is followed by an overview of studies of molecular machines and similar supramolecular structures in various interfacial environments. The interfacial environments are classified into (i) solid interfaces, (ii) liquid interfaces, and (iii) various material and biological interfaces. Molecular machines are expanding their activities from the static environment of a solid interface to the more dynamic environment of a liquid interface. Molecular machines change their field of activity while maintaining their basic functions and induce the accumulation of individual molecular machines into macroscopic physical properties molecular machines through macroscopic mechanical motions can be employed to control molecular machines. Moreover, research on molecular machines is not limited to solid and liquid interfaces; interfaces with living organisms are also crucial.
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Affiliation(s)
- Katsuhiko Ariga
- Research Center for Materials Nanoarchitectonics, National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Japan.
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwa-no-ha, Kashiwa 277-8561, Japan
| | - Jingwen Song
- Research Center for Functional Materials, National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki, Japan
| | - Kohsaku Kawakami
- Research Center for Functional Materials, National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki, Japan
- Graduate School of Pure and Applied Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba 305-8577, Ibaraki, Japan
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Mori T. Mechanical control of molecular machines at an air-water interface: manipulation of molecular pliers, paddles. SCIENCE AND TECHNOLOGY OF ADVANCED MATERIALS 2024; 25:2334667. [PMID: 38628979 PMCID: PMC11020556 DOI: 10.1080/14686996.2024.2334667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Accepted: 03/20/2024] [Indexed: 04/19/2024]
Abstract
Many artificial molecular machines have been synthesized, and various functions have been expressed by changing their molecular conformations. However, their structures are still simple compared with those of biomolecular machines, and more energy is required to control them. To design artificial molecular machines with more complex structures and higher functionality, it is necessary to combine molecular machines with simple movements such as components. This means that the motion of individual molecular machines must be precisely controlled and observed in various environments. At the air - water interface, the molecular orientation and conformation can be controlled with little energy as thermal fluctuations. We designed various molecular machines and controlled them using mechanical stimuli at the air - water interface. We also controlled the transfer of forces to the molecular machines in various lipid matrices. In this review, we describe molecular pliers with amphiphilic binaphthyl, molecular paddles with binuclear platinum complexes, and molecular rotors with julolidine and BODIPY that exhibit twisted intramolecular charge transfer.
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Affiliation(s)
- Taizo Mori
- Institute for Chemical Research (ICR), Kyoto University, Uji, Kyoto, Japan
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3
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Sun X, Guo F, Ye Q, Zhou J, Han J, Guo R. Fluorescent Sensing of Glutathione and Related Bio-Applications. BIOSENSORS 2022; 13:16. [PMID: 36671851 PMCID: PMC9855688 DOI: 10.3390/bios13010016] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 12/13/2022] [Accepted: 12/21/2022] [Indexed: 06/17/2023]
Abstract
Glutathione (GSH), as the most abundant low-molecular-weight biological thiol, plays significant roles in vivo. Abnormal GSH levels have been demonstrated to be related to the dysfunction of specific physiological activities and certain kinds of diseases. Therefore, the sensing of GSH is emerging as a critical issue. Cancer, with typical high morbidity and mortality, remains one of the most serious diseases to threaten public health. As it is clear that much more concentrated GSH is present at tumor sites than at normal sites, the in vivo sensing of GSH offers an option for the early diagnosis of cancer. Moreover, by monitoring the amounts of GSH in specific microenvironments, effective diagnosis of ROS levels, neurological diseases, or even stroke has been developed as well. In this review, we focus on the fluorescent methodologies for GSH detection, since they can be conveniently applied in living systems. First, the fluorescent sensing methods are introduced. Then, the principles for fluorescent sensing of GSH are discussed. In addition, the GSH-sensing-related biological applications are reviewed. Finally, the future opportunities in in the areas of fluorescent GSH sensing-in particular, fluorescent GSH-sensing-prompted disease diagnosis-are addressed.
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Ariga K. Mechano-Nanoarchitectonics: Design and Function. SMALL METHODS 2022; 6:e2101577. [PMID: 35352500 DOI: 10.1002/smtd.202101577] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2021] [Revised: 03/12/2022] [Indexed: 05/27/2023]
Abstract
Mechanical stimuli have rather ambiguous and less-specific features among various physical stimuli, but most materials exhibit a certain level of responses upon mechanical inputs. Unexplored sciences remain in mechanical responding systems as one of the frontiers of materials science. Nanoarchitectonics approaches for mechanically responding materials are discussed as mechano-nanoarchitectonics in this review article. Recent approaches on molecular and materials systems with mechanical response capabilities are first exemplified with two viewpoints: i) mechanical control of supramolecular assemblies and materials and ii) mechanical control and evaluation of atom/molecular level structures. In the following sections, special attentions on interfacial environments for mechano-nanoarchitectonics are emphasized. The section entitled iii) Mechanical Control of Molecular System at Dynamic Interface describes coupling of macroscopic mechanical forces and molecular-level phenomena. Delicate mechanical forces can be applied to functional molecules embedded at the air-water interface where operation of molecular machines and tuning of molecular receptors upon macroscopic mechanical actions are discussed. Finally, the important role of the interfacial media are further extended to the control of living cells as described in the section entitled iv) Mechanical Control of Biosystems. Pioneering approaches on cell fate regulations at liquid-liquid interfaces are discussed in addition to well-known mechanobiology.
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Affiliation(s)
- Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, 277-8561, Japan
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Oliveira ON, Caseli L, Ariga K. The Past and the Future of Langmuir and Langmuir-Blodgett Films. Chem Rev 2022; 122:6459-6513. [PMID: 35113523 DOI: 10.1021/acs.chemrev.1c00754] [Citation(s) in RCA: 122] [Impact Index Per Article: 61.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
The Langmuir-Blodgett (LB) technique, through which monolayers are transferred from the air/water interface onto a solid substrate, was the first method to allow for the controlled assembly of organic molecules. With its almost 100 year history, it has been the inspiration for most methods to functionalize surfaces and produce nanocoatings, in addition to serving to explore concepts in molecular electronics and nanoarchitectonics. This paper provides an overview of the history of Langmuir monolayers and LB films, including the potential use in devices and a discussion on why LB films are seldom considered for practical applications today. Emphasis is then given to two areas where these films offer unique opportunities, namely, in mimicking cell membrane models and exploiting nanoarchitectonics concepts to produce sensors, investigate molecular recognitions, and assemble molecular machines. The most promising topics for the short- and long-term prospects of the LB technique are also highlighted.
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Affiliation(s)
- Osvaldo N Oliveira
- São Carlos Institute of Physics, University of Sao Paulo, CP 369, 13560-970 Sao Carlos, SP, Brazil
| | - Luciano Caseli
- Department of Chemistry, Federal University of São Paulo, 09913-030 Diadema, SP, Brazil
| | - Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 305-0044 Tsukuba, Japan.,Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-0827, Japan
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Ariga K. Nanoarchitectonics for Analytical Science at Interfaces and with Supramolecular Nanostructures. ANAL SCI 2021; 37:1331-1348. [PMID: 33967184 DOI: 10.2116/analsci.21r003] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
For materials development with high-level structural regulations, the emerging concept of nanoarchitectonics has been proposed. Analytical sciences, including sensing/detection, sensors, and related device construction, are active targets of the nanoarchitectonics approach. This review article focuses on the two features of interface and nanostructures are especially focused to discuss nanoarchitectonics for analytical science. Especially, two selected topics, (i) analyses on molecular sensing at interfaces and (ii) sensors using self-assembled supramolecular nanostructures, are exemplified in this review article. In addition to recent general examples, specific molecular recognition at the air-water interface and fabrication of sensing materials upon self-assembly of fullerene units are discussed. Descriptions of these examples indicate that nanoarchitectonics and analytical science share common benefits, and therefore, developments in both research fields should lead to synergies.
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Affiliation(s)
- Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS).,Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo
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Geng W, Ye Z, Zheng Z, Gao J, Li J, Shah MR, Xiao L, Guo D. Supramolecular Bioimaging through Signal Amplification by Combining Indicator Displacement Assay with Förster Resonance Energy Transfer. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202104358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Wen‐Chao Geng
- College of Chemistry Key Laboratory of Functional Polymer Materials (Ministry of Education) State Key Laboratory of Elemento-Organic Chemistry Nankai University Tianjin 3 00071 China
| | - Zhongju Ye
- State Key Laboratory of Medicinal Chemical Biology Tianjin Key Laboratory of Biosensing and Molecular Recognition College of Chemistry Nankai University Tianjin 300071 China
| | - Zhe Zheng
- College of Chemistry Key Laboratory of Functional Polymer Materials (Ministry of Education) State Key Laboratory of Elemento-Organic Chemistry Nankai University Tianjin 3 00071 China
| | - Jie Gao
- College of Chemistry Key Laboratory of Functional Polymer Materials (Ministry of Education) State Key Laboratory of Elemento-Organic Chemistry Nankai University Tianjin 3 00071 China
| | - Juan‐Juan Li
- College of Chemistry Key Laboratory of Functional Polymer Materials (Ministry of Education) State Key Laboratory of Elemento-Organic Chemistry Nankai University Tianjin 3 00071 China
| | - Muhammad Raza Shah
- H.E.J. Research Institute of Chemistry International Center for Chemical and Biological Sciences Karachi University Karachi 74200 Pakistan
| | - Lehui Xiao
- State Key Laboratory of Medicinal Chemical Biology Tianjin Key Laboratory of Biosensing and Molecular Recognition College of Chemistry Nankai University Tianjin 300071 China
| | - Dong‐Sheng Guo
- College of Chemistry Key Laboratory of Functional Polymer Materials (Ministry of Education) State Key Laboratory of Elemento-Organic Chemistry Nankai University Tianjin 3 00071 China
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Geng WC, Ye Z, Zheng Z, Gao J, Li JJ, Shah MR, Xiao L, Guo DS. Supramolecular Bioimaging through Signal Amplification by Combining Indicator Displacement Assay with Förster Resonance Energy Transfer. Angew Chem Int Ed Engl 2021; 60:19614-19619. [PMID: 34263514 DOI: 10.1002/anie.202104358] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Revised: 07/10/2021] [Indexed: 11/06/2022]
Abstract
Fluorescent chemosensors are powerful imaging tools in the fields of life sciences and engineering. Based on the principle of supramolecular chemistry, indicator displacement assay (IDA) provides an alternative approach for constructing and optimizing chemosensors, which has the advantages of simplicity, tunability, and modularity. However, the application of IDA in bioimaging continues to face a series of challenges, including interfering signals, background noise, and inconsistent spatial location. Accordingly, we herein report a supramolecular bioimaging strategy of Förster resonance energy transfer (FRET)-assisted IDA by employing macrocyclic amphiphiles as the operating platform. By merging FRET with IDA, the limitations of IDA in bioimaging were addressed. As a proof of concept, the study achieved mitochondria-targeted imaging of adenosine triphosphate in live cells with signal amplification. This study opens a non-covalent avenue for bioimaging with advancements in tunability, generality, and simplicity, apart from the covalent approach.
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Affiliation(s)
- Wen-Chao Geng
- College of Chemistry, Key Laboratory of Functional Polymer Materials (Ministry of Education), State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 3, 00071, China
| | - Zhongju Ye
- State Key Laboratory of Medicinal Chemical Biology, Tianjin Key Laboratory of Biosensing and Molecular Recognition, College of Chemistry, Nankai University, Tianjin, 300071, China
| | - Zhe Zheng
- College of Chemistry, Key Laboratory of Functional Polymer Materials (Ministry of Education), State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 3, 00071, China
| | - Jie Gao
- College of Chemistry, Key Laboratory of Functional Polymer Materials (Ministry of Education), State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 3, 00071, China
| | - Juan-Juan Li
- College of Chemistry, Key Laboratory of Functional Polymer Materials (Ministry of Education), State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 3, 00071, China
| | - Muhammad Raza Shah
- H.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, Karachi University, Karachi, 74200, Pakistan
| | - Lehui Xiao
- State Key Laboratory of Medicinal Chemical Biology, Tianjin Key Laboratory of Biosensing and Molecular Recognition, College of Chemistry, Nankai University, Tianjin, 300071, China
| | - Dong-Sheng Guo
- College of Chemistry, Key Laboratory of Functional Polymer Materials (Ministry of Education), State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 3, 00071, China
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Rather IA, Ali R. Indicator displacement assays: from concept to recent developments. Org Biomol Chem 2021; 19:5926-5981. [PMID: 34143168 DOI: 10.1039/d1ob00518a] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Overcoming the synthetic burden related to covalently connected receptors with appropriate indicators for sensing various analytes via an indicator spacer receptor (ISR) approach, the indicator displacement assay (IDA) seems to be a very sophisticated and versatile supramolecular sensing paradigm, and it has taken the phenomenon of molecular recognition to the next level in the realm of host-guest chemistry. Due to the unavailability of a comprehensive report on what has been done in the last decade in relation to IDAs, we decided to set down this account illustrating diverse indicator displacement assays (IDAs) in detail from the concept stage to recent developments relating to the detection of cationic, anionic, and neutral analytes. The authors conclude this account with future perspectives and highlight the limitations and challenges relating to IDAs which need to be overcome in order to realize the full potential of this popular sensing phenomenon. While we were finalizing our account for publication, a tutorial review by the research groups of Anslyn, Sessler, and Sun was published, which focuses mainly on diverse aspects of the chemistry related to IDAs. As can be seen, our review, besides discussing various basic IDA concepts, has a vast collection of information published in the past decade and hence, hopefully, will be very informative for the supramolecular community. We believe that this work will offer new insights for the construction of novel sensors operating through the IDA approach.
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Affiliation(s)
- Ishfaq Ahmad Rather
- Organic and Supramolecular Functional Materials Research Laboratory, Department of Chemistry, Jamia Millia Islamia, Jamia Nagar, Okhla, New Delhi 110025, India.
| | - Rashid Ali
- Organic and Supramolecular Functional Materials Research Laboratory, Department of Chemistry, Jamia Millia Islamia, Jamia Nagar, Okhla, New Delhi 110025, India.
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Abstract
In science and technology today, the crucial importance of the regulation of nanoscale objects and structures is well recognized. The production of functional material systems using nanoscale units can be achieved via the fusion of nanotechnology with the other research disciplines. This task is a part of the emerging concept of nanoarchitectonics, which is a concept moving beyond the area of nanotechnology. The concept of nanoarchitectonics is supposed to involve the architecting of functional materials using nanoscale units based on the principles of nanotechnology. In this focus article, the essences of nanotechnology and nanoarchitectonics are first explained, together with their historical backgrounds. Then, several examples of material production based on the concept of nanoarchitectonics are introduced via several approaches: (i) from atomic switches to neuromorphic networks; (ii) from atomic nanostructure control to environmental and energy applications; (iii) from interfacial processes to devices; and (iv) from biomolecular assemblies to life science. Finally, perspectives relating to the final goals of the nanoarchitectonics approach are discussed.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan. and Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
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Nakamitsu M, Oyama K, Imai H, Fujii S, Oaki Y. Ultrahigh-Sensitive Compression-Stress Sensor Using Integrated Stimuli-Responsive Materials. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2021; 33:e2008755. [PMID: 33615567 DOI: 10.1002/adma.202008755] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2020] [Revised: 01/12/2021] [Indexed: 06/12/2023]
Abstract
Measurement of mechanical stresses, such as compression, shear, and tensile stresses, contributes toward achieving a safer and healthier life. In particular, the detection of weak compression stresses is required for healthcare monitoring and biomedical applications. Compression stresses in the order of 106 -1010 Pa have been visualized and/or quantified using mechano-responsive materials in previous works. However, in general, it is not easy to detect compression stresses weaker than 103 Pa using conventional mechano-responsive materials because the dynamic motion of the rigid mechano-responsive molecules is not induced by such a weak stress. In the present work, weak compression stresses in the order of 100 -103 Pa are visualized and measured via the integration of stimuli-responsive materials, such as layered polydiacetylene (PDA) and dry liquid (DL), through response cascades. DLs consisting of liquid droplets covered by solid particles release the interior liquid and collapse with application of a weak compression stress. The color of the layered PDA is changed by the spilled liquid as a chemical stress. A variety of weak compression stresses, such as expiratory pressure, are visualized and colorimetrically measured using the paper-based device of the integrated stimuli-responsive materials. Diverse mechano-sensing devices can be designed via the integration of stimuli-responsive materials.
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Affiliation(s)
- Minami Nakamitsu
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Keigo Oyama
- Department of Applied Chemistry, Faculty of Engineering, Osaka Institute of Technology, 5-16-1 Omiya, Asahi-ku, Osaka, 535-8585, Japan
| | - Hiroaki Imai
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Syuji Fujii
- Department of Applied Chemistry, Faculty of Engineering, Osaka Institute of Technology, 5-16-1 Omiya, Asahi-ku, Osaka, 535-8585, Japan
| | - Yuya Oaki
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
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Li Y, Männel MJ, Hauck N, Patel HP, Auernhammer GK, Chae S, Fery A, Li J, Thiele J. Embedment of Quantum Dots and Biomolecules in a Dipeptide Hydrogel Formed In Situ Using Microfluidics. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202015340] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Yue Li
- Leibniz-Institut für Polymerforschung Dresden e.V. 01069 Dresden Germany
| | - Max J. Männel
- Leibniz-Institut für Polymerforschung Dresden e.V. 01069 Dresden Germany
| | - Nicolas Hauck
- Leibniz-Institut für Polymerforschung Dresden e.V. 01069 Dresden Germany
| | - Himanshu P. Patel
- Leibniz-Institut für Polymerforschung Dresden e.V. 01069 Dresden Germany
| | | | - Soosang Chae
- Leibniz-Institut für Polymerforschung Dresden e.V. 01069 Dresden Germany
| | - Andreas Fery
- Leibniz-Institut für Polymerforschung Dresden e.V. 01069 Dresden Germany
- Technische Universität Dresden 01069 Dresden Germany
| | - Junbai Li
- Beijing National Laboratory for Molecular Sciences (BNLMS) CAS Key Laboratory of Colloids, Interface and Chemical, Thermodynamics Institute of Chemistry Chinese Academy of Sciences 100190 Beijing China
- University of Chinese Academy of Sciences 100049 Beijing China
| | - Julian Thiele
- Leibniz-Institut für Polymerforschung Dresden e.V. 01069 Dresden Germany
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Ariga K. Progress in Molecular Nanoarchitectonics and Materials Nanoarchitectonics. Molecules 2021; 26:1621. [PMID: 33804013 PMCID: PMC7998694 DOI: 10.3390/molecules26061621] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Revised: 03/12/2021] [Accepted: 03/12/2021] [Indexed: 11/24/2022] Open
Abstract
Although various synthetic methodologies including organic synthesis, polymer chemistry, and materials science are the main contributors to the production of functional materials, the importance of regulation of nanoscale structures for better performance has become clear with recent science and technology developments. Therefore, a new research paradigm to produce functional material systems from nanoscale units has to be created as an advancement of nanoscale science. This task is assigned to an emerging concept, nanoarchitectonics, which aims to produce functional materials and functional structures from nanoscale unit components. This can be done through combining nanotechnology with the other research fields such as organic chemistry, supramolecular chemistry, materials science, and bio-related science. In this review article, the basic-level of nanoarchitectonics is first presented with atom/molecular-level structure formations and conversions from molecular units to functional materials. Then, two typical application-oriented nanoarchitectonics efforts in energy-oriented applications and bio-related applications are discussed. Finally, future directions of the molecular and materials nanoarchitectonics concepts for advancement of functional nanomaterials are briefly discussed.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan;
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
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Li Y, Männel MJ, Hauck N, Patel HP, Auernhammer GK, Chae S, Fery A, Li J, Thiele J. Embedment of Quantum Dots and Biomolecules in a Dipeptide Hydrogel Formed In Situ Using Microfluidics. Angew Chem Int Ed Engl 2021; 60:6724-6732. [PMID: 33283395 PMCID: PMC7986802 DOI: 10.1002/anie.202015340] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Indexed: 01/03/2023]
Abstract
As low-molecular-weight hydrogelators, dipeptide hydrogel materials are suited for embedding multiple organic molecules and inorganic nanoparticles. Herein, a simple but precisely controllable method is presented that enables the fabrication of dipeptide-based hydrogels by supramolecular assembly inside microfluidic channels. Water-soluble quantum dots (QDs) as well as premixed porphyrins and a dipeptide in dimethyl sulfoxide (DMSO) were injected into a Y-shaped microfluidic junction. At the DMSO/water interface, the confined fabrication of a dipeptide-based hydrogel was initiated. Thereafter, the as-formed hydrogel flowed along a meandering microchannel in a continuous fashion, gradually completing gelation and QD entrapment. In contrast to hydrogelation in conventional test tubes, microfluidically controlled hydrogelation led to a tailored dipeptide hydrogel regarding material morphology and nanoparticle distribution.
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Affiliation(s)
- Yue Li
- Leibniz-Institut für Polymerforschung Dresden e.V.01069DresdenGermany
| | - Max J. Männel
- Leibniz-Institut für Polymerforschung Dresden e.V.01069DresdenGermany
| | - Nicolas Hauck
- Leibniz-Institut für Polymerforschung Dresden e.V.01069DresdenGermany
| | - Himanshu P. Patel
- Leibniz-Institut für Polymerforschung Dresden e.V.01069DresdenGermany
| | | | - Soosang Chae
- Leibniz-Institut für Polymerforschung Dresden e.V.01069DresdenGermany
| | - Andreas Fery
- Leibniz-Institut für Polymerforschung Dresden e.V.01069DresdenGermany
- Technische Universität Dresden01069DresdenGermany
| | - Junbai Li
- Beijing National Laboratory for Molecular Sciences (BNLMS)CAS Key Laboratory of Colloids, Interface and Chemical, ThermodynamicsInstitute of ChemistryChinese Academy of Sciences100190BeijingChina
- University of Chinese Academy of Sciences100049BeijingChina
| | - Julian Thiele
- Leibniz-Institut für Polymerforschung Dresden e.V.01069DresdenGermany
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Sedgwick AC, Brewster JT, Wu T, Feng X, Bull SD, Qian X, Sessler JL, James TD, Anslyn EV, Sun X. Indicator displacement assays (IDAs): the past, present and future. Chem Soc Rev 2021; 50:9-38. [DOI: 10.1039/c9cs00538b] [Citation(s) in RCA: 69] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Indicator displacement assays (IDAs) offer a unique and innovative approach to molecular sensing. This Tutorial review discusses the basic concepts of each IDA strategy and illustrates their use in sensing applications.
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Affiliation(s)
- Adam C. Sedgwick
- Department of Chemistry
- The University of Texas at Austin
- Austin
- USA
| | | | - Tianhong Wu
- The Key Laboratory of Biomedical Information Engineering of Ministry of Education
- School of Life Science and Technology
- Xi’an Jiaotong University
- Xi’an
- P. R. China
| | - Xing Feng
- The Key Laboratory of Biomedical Information Engineering of Ministry of Education
- School of Life Science and Technology
- Xi’an Jiaotong University
- Xi’an
- P. R. China
| | | | - Xuhong Qian
- State Key Laboratory of Bioreactor Engineering
- Shanghai Key Laboratory of Chemical Biology
- School of Pharmacy
- East China University of Science and Technology
- Shanghai 200237
| | | | | | - Eric V. Anslyn
- Department of Chemistry
- The University of Texas at Austin
- Austin
- USA
| | - Xiaolong Sun
- The Key Laboratory of Biomedical Information Engineering of Ministry of Education
- School of Life Science and Technology
- Xi’an Jiaotong University
- Xi’an
- P. R. China
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16
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Ariga K. Nanoarchitectonics Revolution and Evolution: From Small Science to Big Technology. SMALL SCIENCE 2020. [DOI: 10.1002/smsc.202000032] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Affiliation(s)
- Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) 1-1 Namiki Tsukuba 305-0044 Japan
- Department of Advanced Materials Science Graduate School of Frontier Sciences The University of Tokyo 5-1-5 Kashiwanoha Kashiwa Chiba 277-8561 Japan
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17
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Oaki Y. Intercalation and flexibility chemistries of soft layered materials. Chem Commun (Camb) 2020; 56:13069-13081. [PMID: 33021619 DOI: 10.1039/d0cc05931e] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Layered materials, alternate stackings of two or more components, are found in a wide range of scales. Chemists can design and synthesize layered structures containing functional units. The soft-type layered materials exhibit characteristic dynamic functions originating from two-dimensional (2D) anisotropy and structure flexibility. This feature article focuses on "intercalation" and "flexibility" as two new perspectives for designing soft layered materials. Intercalation of guests is a characteristic approach for design of layered structures. Flexibility is an important factor to control the dynamic functions of the layered structures. As a model case, the intercalation-induced tunable stimuli-responsive color-change properties of layered polydiacetylene (PDA) are introduced to study the impact of the intercalation and flexibility on the dynamic functions. Recently, layered materials have drastically expanded the research area from conventional rigid inorganic compounds to new self-assembled nanostructures consisting of organic components, such as polymers, metal-organic frameworks, and covalent-organic frameworks. These new layered architectures have potentials for exhibiting dynamic functions originating from the structure flexibility beyond the static properties originating from classical intercalation and host-guest chemistries. Therefore, intercalation and flexibility chemistries of soft layered materials are regarded as new perspectives for design of advanced dynamic functional materials.
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Affiliation(s)
- Yuya Oaki
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan.
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18
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Ariga K. Molecular recognition at the air-water interface: nanoarchitectonic design and physicochemical understanding. Phys Chem Chem Phys 2020; 22:24856-24869. [PMID: 33140772 DOI: 10.1039/d0cp04174b] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Although molecular recognition at the air-water interface has been researched for over 30 years, investigations on its fundamental aspects are still active research targets in current science. In this perspective article, developments and future possibilities of molecular recognition at the air-water interface from pioneering research efforts to current examples are overviewed especially from the physico-chemical viewpoints. Significant enhancements of binding constants for molecular recognition are actually observed at the air-water interface although molecular interactions such as hydrogen bonding are usually suppressed in aqueous media. Recent advanced analytical strategies for direct characterization of interfacial molecules also confirmed the promoted formation of hydrogen bonding at the air-water interfaces. Traditional quantum chemical approaches indicate that modulation of electronic distributions through effects from low-dielectric phases would be the origin of enhanced molecular interactions at the air-water interface. Further theoretical considerations suggest that unusual potential changes for enhanced molecular interactions are available only within a limited range from the interface. These results would be related with molecular recognition in biomolecular systems that is similarly supported by promoted molecular interactions in interfacial environments such as cell membranes, surfaces of protein interiors, and macromolecular interfaces.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan.
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19
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Ishii M, Mori T, Nakanishi W, Hill JP, Sakai H, Ariga K. Helicity Manipulation of a Double-Paddled Binaphthyl in a Two-Dimensional Matrix Field at the Air-Water Interface. ACS NANO 2020; 14:13294-13303. [PMID: 33017149 DOI: 10.1021/acsnano.0c05093] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Molecular behavior and functionality are affected by their prevailing immediate environment. Molecular machines function according to conformational variations and have been studied largely in solution states. In order to access more highly complex functional molecular machines, it is necessary to analyze and control them in various environments. We have designed and synthesized a bisbinaphthyldurene (BBD) molecule that has two binaphthyl groups connected through a central durene moiety, allowing for the formation of several conformers. In density functional theory (DFT) calculations, BBD has five major conformers, denoted anti-1/anti-2/syn-1/syn-2/flat. It has been demonstrated that BBD exhibits different conformations in solution (anti-1 and syn-1) than on a gold surface (syn dimer and flat). In this work, the ratio of BBD conformations has been controlled in mixed monolayers with several different lipids at an air-water interface in order to compare conformational activity under different conditions. The conformations of BBD in transferred films obtained by using Langmuir-Blodgett techniques were estimated from circular dichroism spectra and DFT calculations. It has been found that the conformation of BBD in the mixed monolayer depends on its aggregated state, which has been controlled here by the mechanical properties and miscibility. In mixed monolayers with "hard" lipids having less miscibility with BBD as well as in cast film, BBD is self-aggregated and mostly forms stable anti-1 and syn-1 conformations, while unstable anti-2 and syn-2 conformers dominated in the more dispersed states involving "soft" lipids, which show good miscibility with BBD. Conformational changes in BBD are due to the formation of different aggregated states in each mixed monolayer according to the miscibility. Overall, BBD molecular conformations (and the resulting spectra) could be tuned by controlling the environment whether in solution, on a solid substrate, or in an admixture with lipids at the air-water interface.
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Affiliation(s)
- Masaki Ishii
- Graduate School of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan
- International Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
| | - Taizo Mori
- International Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
- Institute for Solid State Physics, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
| | - Waka Nakanishi
- International Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
| | - Jonathan P Hill
- International Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
| | - Hideki Sakai
- Graduate School of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan
| | - Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
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20
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Ariga K, Ishii M, Mori T. 2D Nanoarchitectonics: Soft Interfacial Media as Playgrounds for Microobjects, Molecular Machines, and Living Cells. Chemistry 2020; 26:6461-6472. [PMID: 32159246 DOI: 10.1002/chem.202000789] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Indexed: 12/15/2022]
Abstract
Soft and flexible two-dimensional (2D) systems, such as liquid interfaces, would have much more potentials in dynamic regulation on nano-macro connected functions. In this Minireview article, we focus especially on dynamic motional functions at liquid dynamic interfaces as 2D material systems. Several recent examples are selected to be explained for overviewing features and importance of dynamic soft interfaces in a wide range of action systems. The exemplified research systems are mainly classified into three categories: (i) control of microobjects with motional regulations; (ii) control of molecular machines with functions of target discrimination and optical outputs; (iii) control of living cells including molecular machine functions at cell membranes and cell/biomolecular behaviors at liquid interface. Sciences on soft 2D media with motional freedom and their nanoarchitectonics constructions will have increased importance in future technology in addition to popular rigid solid 2D materials.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan.,Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Masaki Ishii
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan.,Department of Pure and Applied Chemistry, Graduate School of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba, 278-8510, Japan
| | - Taizo Mori
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan.,Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
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21
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Ariga K, Yamauchi Y. Nanoarchitectonics from Atom to Life. Chem Asian J 2020; 15:718-728. [PMID: 32017354 DOI: 10.1002/asia.202000106] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Revised: 01/31/2020] [Accepted: 02/03/2020] [Indexed: 12/12/2022]
Abstract
Functional materials with rational organization cannot be directly created only by nanotechnology-related top-down approaches. For this purpose, a novel research paradigm next to nanotechnology has to be established to create functional materials on the basis of deep nanotechnology knowledge. This task can be assigned to an emerging concept, nanoarchitectonics. In the nanoarchitectonics approaches, functional materials were architected through combination of atom/molecular manipulation, organic chemical synthesis, self-assembly and related spontaneous processes, field-applied assembly, micro/nano fabrications, and bio-related processes. In this short review article, nanoarchitectonics-related approaches on materials fabrications and functions are exemplified from atom-scale to living creature level. Based on their features, unsolved problems for future developments of the nanoarchitectonics concept are finally discussed.
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Affiliation(s)
- Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics MANA, National Institute for Materials Science NIMS, 1-1 Namiki, 305-0044, Tsukuba, Ibaraki, JAPAN
| | - Yusuke Yamauchi
- University of Queensland, School of Chemical Engineering, AUSTRALIA
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22
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Interfacial nanoarchitectonics for molecular manipulation and molecular machine operation. Curr Opin Colloid Interface Sci 2019. [DOI: 10.1016/j.cocis.2019.08.004] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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23
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Mori T, Chin H, Kawashima K, Ngo HT, Cho NJ, Nakanishi W, Hill JP, Ariga K. Dynamic Control of Intramolecular Rotation by Tuning the Surrounding Two-Dimensional Matrix Field. ACS NANO 2019; 13:2410-2419. [PMID: 30673207 DOI: 10.1021/acsnano.8b09320] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The intramolecular rotation of 4-farnesyloxyphenyl-4,4-difluoro-4-bora-3a,4a-diaza- s-indacene (BODIPY-ISO) was controlled by tuning its local physical environment within a mixed self-assembled monolayer at an air-water interface. Intramolecular rotation was investigated by considering the twisted intramolecular charge transfer (TICT) fluorescence of BODIPY-ISO, which increases in intensity with increasing viscosity of the medium. In situ fluorescence spectroscopy was performed on mixed monolayers of BODIPY-ISO with several different lipids at the air-water interface during in-plane compression of the monolayers. Depending on the identity of the lipid used, the fluorescence of the mixed monolayers could be enhanced by mechanical compression, indicating that the rotation of BODIPY-ISO can be controlled dynamically in mixtures with lipids dispersed at the air-water interface. Taken together, our findings provide insight into strategies for controlling the dynamic behavior of molecular machines involving mechanical stimuli at interfaces.
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Affiliation(s)
- Taizo Mori
- Graduate School of Frontier Sciences , The University of Tokyo , 5-1-5, Kashiwanoha , Kashiwa 277-0827 , Japan
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA) , National Institute for Materials Science , 1-1 Namiki , Tsukuba 305-0044 , Japan
| | - Hokyun Chin
- School of Materials Science and Engineering , Nanyang Technological University , Singapore , 637553 , Singapore
| | - Kazuhiro Kawashima
- Global Research Center for Environment and Energy Based on Nanomaterials Science (GREEN) , National Institute for Materials Science , 1-1 Namiki , Tsukuba 305-0044 , Japan
| | - Huynh Thien Ngo
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA) , National Institute for Materials Science , 1-1 Namiki , Tsukuba 305-0044 , Japan
| | - Nam-Joon Cho
- School of Materials Science and Engineering , Nanyang Technological University , Singapore , 637553 , Singapore
- School of Chemical and Biomedical Engineering , Nanyang Technological University , Singapore , 637459 , Singapore
| | - Waka Nakanishi
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA) , National Institute for Materials Science , 1-1 Namiki , Tsukuba 305-0044 , Japan
| | - Jonathan P Hill
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA) , National Institute for Materials Science , 1-1 Namiki , Tsukuba 305-0044 , Japan
| | - Katsuhiko Ariga
- Graduate School of Frontier Sciences , The University of Tokyo , 5-1-5, Kashiwanoha , Kashiwa 277-0827 , Japan
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA) , National Institute for Materials Science , 1-1 Namiki , Tsukuba 305-0044 , Japan
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24
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Ariga K, Nishikawa M, Mori T, Takeya J, Shrestha LK, Hill JP. Self-assembly as a key player for materials nanoarchitectonics. SCIENCE AND TECHNOLOGY OF ADVANCED MATERIALS 2019; 20:51-95. [PMID: 30787960 PMCID: PMC6374972 DOI: 10.1080/14686996.2018.1553108] [Citation(s) in RCA: 215] [Impact Index Per Article: 43.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Revised: 11/23/2018] [Accepted: 11/25/2018] [Indexed: 05/07/2023]
Abstract
The development of science and technology of advanced materials using nanoscale units can be conducted by a novel concept involving combination of nanotechnology methodology with various research disciplines, especially supramolecular chemistry. The novel concept is called 'nanoarchitectonics' where self-assembly processes are crucial in many cases involving a wide range of component materials. This review of self-assembly processes re-examines recent progress in materials nanoarchitectonics. It is composed of three main sections: (1) the first short section describes typical examples of self-assembly research to outline the matters discussed in this review; (2) the second section summarizes self-assemblies at interfaces from general viewpoints; and (3) the final section is focused on self-assembly processes at interfaces. The examples presented demonstrate the strikingly wide range of possibilities and future potential of self-assembly processes and their important contribution to materials nanoarchitectonics. The research examples described in this review cover variously structured objects including molecular machines, molecular receptors, molecular pliers, molecular rotors, nanoparticles, nanosheets, nanotubes, nanowires, nanoflakes, nanocubes, nanodisks, nanoring, block copolymers, hyperbranched polymers, supramolecular polymers, supramolecular gels, liquid crystals, Langmuir monolayers, Langmuir-Blodgett films, self-assembled monolayers, thin films, layer-by-layer structures, breath figure motif structures, two-dimensional molecular patterns, fullerene crystals, metal-organic frameworks, coordination polymers, coordination capsules, porous carbon spheres, mesoporous materials, polynuclear catalysts, DNA origamis, transmembrane channels, peptide conjugates, and vesicles, as well as functional materials for sensing, surface-enhanced Raman spectroscopy, photovoltaics, charge transport, excitation energy transfer, light-harvesting, photocatalysts, field effect transistors, logic gates, organic semiconductors, thin-film-based devices, drug delivery, cell culture, supramolecular differentiation, molecular recognition, molecular tuning, and hand-operating (hand-operated) nanotechnology.
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Affiliation(s)
- Katsuhiko Ariga
- WPI-MANA, National Institute for Materials Science (NIMS), Ibaraki, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan
| | | | - Taizo Mori
- WPI-MANA, National Institute for Materials Science (NIMS), Ibaraki, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan
| | - Jun Takeya
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan
| | - Lok Kumar Shrestha
- WPI-MANA, National Institute for Materials Science (NIMS), Ibaraki, Japan
| | - Jonathan P. Hill
- WPI-MANA, National Institute for Materials Science (NIMS), Ibaraki, Japan
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Ariga K, Makita T, Ito M, Mori T, Watanabe S, Takeya J. Review of advanced sensor devices employing nanoarchitectonics concepts. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2019; 10:2014-2030. [PMID: 31667049 PMCID: PMC6808193 DOI: 10.3762/bjnano.10.198] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2019] [Accepted: 09/06/2019] [Indexed: 05/09/2023]
Abstract
Many recent advances in sensor technology have been possible due to nanotechnological advancements together with contributions from other research fields. Such interdisciplinary collaborations fit well with the emerging concept of nanoarchitectonics, which is a novel conceptual methodology to engineer functional materials and systems from nanoscale units through the fusion of nanotechnology with other research fields, including organic chemistry, supramolecular chemistry, materials science and biology. In this review article, we discuss recent advancements in sensor devices and sensor materials that take advantage of advanced nanoarchitectonics concepts for improved performance. In the first part, recent progress on sensor systems are roughly classified according to the sensor targets, such as chemical substances, physical conditions, and biological phenomena. In the following sections, advancements in various nanoarchitectonic motifs, including nanoporous structures, ultrathin films, and interfacial effects for improved sensor function are discussed to realize the importance of nanoarchitectonic structures. Many of these examples show that advancements in sensor technology are no longer limited by progress in microfabrication and nanofabrication of device structures - opening a new avenue for highly engineered, high performing sensor systems through the application of nanoarchitectonics concepts.
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Affiliation(s)
- Katsuhiko Ariga
- WPI-MANA, National Institute for Materials Science, 1-1 Namiki, Tsukuba 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa 277-8561, Japan
| | - Tatsuyuki Makita
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa 277-8561, Japan
| | - Masato Ito
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa 277-8561, Japan
| | - Taizo Mori
- WPI-MANA, National Institute for Materials Science, 1-1 Namiki, Tsukuba 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa 277-8561, Japan
| | - Shun Watanabe
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa 277-8561, Japan
| | - Jun Takeya
- WPI-MANA, National Institute for Materials Science, 1-1 Namiki, Tsukuba 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa 277-8561, Japan
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26
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Ariga K, Matsumoto M, Mori T, Shrestha LK. Materials nanoarchitectonics at two-dimensional liquid interfaces. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2019; 10:1559-1587. [PMID: 31467820 PMCID: PMC6693411 DOI: 10.3762/bjnano.10.153] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2019] [Accepted: 07/16/2019] [Indexed: 05/06/2023]
Abstract
Much attention has been paid to the synthesis of low-dimensional materials from small units such as functional molecules. Bottom-up approaches to create new low-dimensional materials with various functional units can be realized with the emerging concept of nanoarchitectonics. In this review article, we overview recent research progresses on materials nanoarchitectonics at two-dimensional liquid interfaces, which are dimensionally restricted media with some freedoms of molecular motion. Specific characteristics of molecular interactions and functions at liquid interfaces are briefly explained in the first parts. The following sections overview several topics on materials nanoarchitectonics at liquid interfaces, such as the preparation of two-dimensional metal-organic frameworks and covalent organic frameworks, and the fabrication of low-dimensional and specifically structured nanocarbons and their assemblies at liquid-liquid interfaces. Finally, interfacial nanoarchitectonics of biomaterials including the regulation of orientation and differentiation of living cells are explained. In the recent examples described in this review, various materials such as molecular machines, molecular receptors, block-copolymer, DNA origami, nanocarbon, phages, and stem cells were assembled at liquid interfaces by using various useful techniques. This review overviews techniques such as conventional Langmuir-Blodgett method, vortex Langmuir-Blodgett method, liquid-liquid interfacial precipitation, instructed assembly, and layer-by-layer assembly to give low-dimensional materials including nanowires, nanowhiskers, nanosheets, cubic objects, molecular patterns, supramolecular polymers, metal-organic frameworks and covalent organic frameworks. The nanoarchitecture materials can be used for various applications such as molecular recognition, sensors, photodetectors, supercapacitors, supramolecular differentiation, enzyme reactors, cell differentiation control, and hemodialysis.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - Michio Matsumoto
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
| | - Taizo Mori
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - Lok Kumar Shrestha
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
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Ariga K, Jackman JA, Cho NJ, Hsu SH, Shrestha LK, Mori T, Takeya J. Nanoarchitectonic-Based Material Platforms for Environmental and Bioprocessing Applications. CHEM REC 2018; 19:1891-1912. [PMID: 30230688 DOI: 10.1002/tcr.201800103] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2018] [Accepted: 08/30/2018] [Indexed: 12/11/2022]
Abstract
The challenges of pollution, environmental science, and energy consumption have become global issues of broad societal importance. In order to address these challenges, novel functional systems and advanced materials are needed to achieve high efficiency, low emission, and environmentally friendly performance. A promising approach involves nanostructure-level controls of functional material design through a novel concept, nanoarchitectonics. In this account article, we summarize nanoarchitectonic approaches to create nanoscale platform structures that are potentially useful for environmentally green and bioprocessing applications. The introduced platforms are roughly classified into (i) membrane platforms and (ii) nanostructured platforms. The examples are discussed together with the relevant chemical processes, environmental sensing, bio-related interaction analyses, materials for environmental remediation, non-precious metal catalysts, and facile separation for biomedical uses.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan.,Graduate School of Frontier Sciences, The University of Tokyo 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Joshua A Jackman
- School of Materials Science and Engineering, Nanyang Technological University, Singapore, 637553, Singapore.,Department of Medicine, Stanford University Stanford, California, 94305, USA
| | - Nam-Joon Cho
- School of Materials Science and Engineering, Nanyang Technological University, Singapore, 637553, Singapore.,School of Chemical and Biomedical Engineering, Nanyang Technological University, Singapore, 637459, Singapore
| | - Shan-Hui Hsu
- Institute of Polymer Science and Engineering, National Taiwan University, No. 1, Sec. 4 Roosevelt Road, Taipei, 10617, Taiwan, R.O.C
| | - Lok Kumar Shrestha
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
| | - Taizo Mori
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan.,Graduate School of Frontier Sciences, The University of Tokyo 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Jun Takeya
- Graduate School of Frontier Sciences, The University of Tokyo 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
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Terada H, Imai H, Oaki Y. Visualization and Quantitative Detection of Friction Force by Self-Organized Organic Layered Composites. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2018; 30:e1801121. [PMID: 29775505 DOI: 10.1002/adma.201801121] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2018] [Revised: 03/16/2018] [Indexed: 06/08/2023]
Abstract
Visualization and quantitative detection of external stimuli are significant challenges in materials science. Quantitative detection of friction force, a mechanical stress, is not easily achieved using conventional stimuli-responsive materials. Here, the quantitative detection of friction force is reported, such as the strength and accumulated ammount, from the visible color of organic layered composites consisting of polydiacetylene (PDA) and organic amines without an excitation light source. The composites of the layered diacetylene monomer crystal and interlayer organic amine are synthesized through self-organization from the precursor solution. After topochemical polymerization, the layered composites based on PDA show tunable temperature-responsive and mechanoresponsive color-change properties depending on the types of interlayer amines. The layered composites are homogeneously coated on a filter paper. The change in color of the paper is quantitatively used to visualize the strength and accumulated amount of the applied friction force. Furthermore, writing pressure is measured by friction force using the paper device.
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Affiliation(s)
- Hideto Terada
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Hiroaki Imai
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Yuya Oaki
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
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Abstract
In 2016, the Nobel Prize in Chemistry was awarded for pioneering work on molecular machines. Half a year later, in Toulouse, the first molecular car race, a "nanocar race", was held by using the tip of a scanning tunneling microscope as an electrical remote control. In this Focus Review, we discuss the current state-of-the-art in research on molecular machines at interfaces. In the first section, we briefly explain the science behind the nanocar race, followed by a selection of recent examples of controlling molecules on surfaces. Finally, motion synchronization and the functions of molecular machines at liquid interfaces are discussed. This new concept of molecular tuning at interfaces is also introduced as a method for the continuous modification and optimization of molecular structure for target functions.
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Affiliation(s)
- Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan.,Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Taizo Mori
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
| | - Waka Nakanishi
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
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Mori T, Komatsu H, Sakamoto N, Suzuki K, Hill JP, Matsumoto M, Sakai H, Ariga K, Nakanishi W. Molecular rotors confined at an ordered 2D interface. Phys Chem Chem Phys 2018; 20:3073-3078. [PMID: 28759061 DOI: 10.1039/c7cp04256f] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Intramolecular rotation of molecules contained in a two-dimensional monolayer or a three-dimensional collapsed film at an air-water interface was investigated by in situ fluorescence spectroscopy of twisted intramolecular charge transfer (TICT) type 9-(2-carboxy-2-cyanovinyl)julolidine (CCVJ) derivatives. The TICT type molecules, CCVJ-C12 and CCVJ-Chol, that contain a linear alkyl dodecyl chain or a cholesteryl group, respectively, as their hydrophobic group, were designed and synthesized to manipulate them at the air-water interface. These lipophilized molecular rotors showed the general properties of TICT molecules in solutions that the fluorescence intensity increases with increasing viscosity of the solvent, which is induced by inhibition of internal molecular rotations. The molecular rotors CCVJ-C12 and CCVJ-Chol formed monolayers at the air-water interface and in situ fluorescence spectroscopy was performed during the in-plane compression of the monolayers. It was revealed that the monomer emissions were suppressed and only after the collapse of monolayers, excimer emission from both layers consisting of CCVJ-C12 or CCVJ-Chol was observed. Suppressed monomer emission from monolayers suggests that intramolecular rotation is not inhibited in dense ordered monolayers. Furthermore, fluorescence spectroscopy of Langmuir-Blodgett (LB) films indicated that molecular rotations are not inhibited in the monolayer transferred on the solid substrates.
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Affiliation(s)
- Taizo Mori
- World Premier International (WPI) Centre for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Japan.
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31
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Xue Z, Xiong L, Peng H, Rao H, Liu X, Lu X. A selective colorimetric sensing strategy for cysteine based on an indicator-displacement mechanism. NEW J CHEM 2018. [DOI: 10.1039/c7nj03887a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Rapid determination of cysteine in aqueous solution is important for the diagnosis and treatment of some diseases.
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Affiliation(s)
- Zhonghua Xue
- Key Laboratory of Bioelectrochemistry & Environmental Analysis of Gansu Province
- College of Chemistry & Chemical Engineering
- Northwest Normal University
- Lanzhou
- China
| | - Lulu Xiong
- Key Laboratory of Bioelectrochemistry & Environmental Analysis of Gansu Province
- College of Chemistry & Chemical Engineering
- Northwest Normal University
- Lanzhou
- China
| | - Hao Peng
- Key Laboratory of Bioelectrochemistry & Environmental Analysis of Gansu Province
- College of Chemistry & Chemical Engineering
- Northwest Normal University
- Lanzhou
- China
| | - Honghong Rao
- School of Chemistry & Environmental Engineering
- Lanzhou City University
- Lanzhou
- China
| | - Xiuhui Liu
- Key Laboratory of Bioelectrochemistry & Environmental Analysis of Gansu Province
- College of Chemistry & Chemical Engineering
- Northwest Normal University
- Lanzhou
- China
| | - Xiaoquan Lu
- Key Laboratory of Bioelectrochemistry & Environmental Analysis of Gansu Province
- College of Chemistry & Chemical Engineering
- Northwest Normal University
- Lanzhou
- China
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Muraoka T, Umetsu K, Tabata KV, Hamada T, Noji H, Yamashita T, Kinbara K. Mechano-Sensitive Synthetic Ion Channels. J Am Chem Soc 2017; 139:18016-18023. [DOI: 10.1021/jacs.7b09515] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Takahiro Muraoka
- School
of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
- Precursory
Research for Embryonic Science and Technology, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Kaori Umetsu
- Institute
of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1,
Katahira, Aoba-ku, Sendai 980-8577, Japan
| | - Kazuhito V. Tabata
- Department
of Applied Chemistry, School of Engineering, The University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Tsutomu Hamada
- School
of Materials Science, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan
| | - Hiroyuki Noji
- Department
of Applied Chemistry, School of Engineering, The University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Takashi Yamashita
- Department
of Pure and Applied Chemistry, Tokyo University of Science, 2641 Yamazaki, Noda-shi, Chiba 278-8510, Japan
| | - Kazushi Kinbara
- School
of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
- Institute
of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1,
Katahira, Aoba-ku, Sendai 980-8577, Japan
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Sagami T, Umemoto S, Tahara YO, Miyata M, Yonamine Y, Ishikawa D, Mori T, Ariga K, Miyake H, Shinoda S. pH-Responsive Cotton Effects in the d–d Transition Band of Self-Assembling Copper(II) Complexes with a Cholesteryl-Armed Ligand. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2017. [DOI: 10.1246/bcsj.20170054] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Takuya Sagami
- Department of Chemistry, Graduate School of Science, Osaka City Univerisity, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585
| | - Shota Umemoto
- Department of Chemistry, Graduate School of Science, Osaka City Univerisity, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585
| | - Yuhei O. Tahara
- Department of Biology, Graduate School of Science, Osaka City Univerisity, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585
| | - Makoto Miyata
- Department of Biology, Graduate School of Science, Osaka City Univerisity, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585
| | - Yusuke Yonamine
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044
| | - Daisuke Ishikawa
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044
| | - Taizo Mori
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044
| | - Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044
| | - Hiroyuki Miyake
- Department of Chemistry, Graduate School of Science, Osaka City Univerisity, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585
| | - Satoshi Shinoda
- Department of Chemistry, Graduate School of Science, Osaka City Univerisity, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585
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Ariga K, Nakanishi W. Exploration of Molecular Function (Molecular Recognition and Molecular Machinery) beyond Molecular Design and Synthesis: Surface Science May Bring One-Million-Times Better Results!? J SYN ORG CHEM JPN 2017. [DOI: 10.5059/yukigoseikyokaishi.75.219] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Ariga K, Mori T, Nakanishi W, Hill JP. Solid surface vs. liquid surface: nanoarchitectonics, molecular machines, and DNA origami. Phys Chem Chem Phys 2017; 19:23658-23676. [DOI: 10.1039/c7cp02280h] [Citation(s) in RCA: 54] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Comparisons of science and technology between these solid and liquid surfaces would be a good navigation for current-to-future developments.
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Affiliation(s)
- Katsuhiko Ariga
- World Premier International (WPI) Research Centre for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba 305-0044
- Japan
- Graduate School of Frontier Science
| | - Taizo Mori
- World Premier International (WPI) Research Centre for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba 305-0044
- Japan
| | - Waka Nakanishi
- World Premier International (WPI) Research Centre for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba 305-0044
- Japan
| | - Jonathan P. Hill
- World Premier International (WPI) Research Centre for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba 305-0044
- Japan
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36
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Zhang MZ, Han HH, Zhang SZ, Wang CY, Lu YX, Zhu WH. A new colorimetric and fluorescent probe with a large stokes shift for rapid and specific detection of biothiols and its application in living cells. J Mater Chem B 2017; 5:8780-8785. [DOI: 10.1039/c7tb02323e] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
A new colorimetric and fluorescent probe with a large stokes shift for rapid and specific detection of biothiols, and its application in living cells.
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Affiliation(s)
- Meng-Zhao Zhang
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- School of Chenmistry and Malecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Hai-Hao Han
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- School of Chenmistry and Malecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Shao-Ze Zhang
- Department of Chemistry
- School of Chemistry and Molecular Engineering
- East China University of Science & Technology
- Shanghai 200237
- P. R. China
| | - Cheng-Yun Wang
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- School of Chenmistry and Malecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Yun-Xiang Lu
- Department of Chemistry
- School of Chemistry and Molecular Engineering
- East China University of Science & Technology
- Shanghai 200237
- P. R. China
| | - Wei-Hong Zhu
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- School of Chenmistry and Malecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
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Kaushik R, Ghosh A, Singh A, Gupta P, Mittal A, Jose DA. Selective Detection of Cyanide in Water and Biological Samples by an Off-the-Shelf Compound. ACS Sens 2016. [DOI: 10.1021/acssensors.6b00519] [Citation(s) in RCA: 75] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Rahul Kaushik
- Department
of Chemistry, Institute of Technology (NIT)-Kurukshetra, Kurukshetra 136119, Haryana, India
| | - Amrita Ghosh
- Department
of Chemistry, Institute of Technology (NIT)-Kurukshetra, Kurukshetra 136119, Haryana, India
| | - Ajeet Singh
- Department
of Physics, Motilal Nehru National Institute of Technology Allahabad, Allahabad 211004 , India
| | - Prachi Gupta
- Skeletal
Muscle Lab, Biochemistry Department, University College, Kurukshetra University, Kurukshetra, Haryana 136119, India
| | - Ashwani Mittal
- Skeletal
Muscle Lab, Biochemistry Department, University College, Kurukshetra University, Kurukshetra, Haryana 136119, India
| | - D. Amilan Jose
- Department
of Chemistry, Institute of Technology (NIT)-Kurukshetra, Kurukshetra 136119, Haryana, India
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38
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Ariga K, Malgras V, Ji Q, Zakaria MB, Yamauchi Y. Coordination nanoarchitectonics at interfaces between supramolecular and materials chemistry. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2016.01.015] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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39
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Li SPY, Yip AMH, Liu HW, Lo KKW. Installing an additional emission quenching pathway in the design of iridium(III)-based phosphorogenic biomaterials for bioorthogonal labelling and imaging. Biomaterials 2016; 103:305-313. [PMID: 27429251 DOI: 10.1016/j.biomaterials.2016.06.065] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2016] [Revised: 06/17/2016] [Accepted: 06/29/2016] [Indexed: 12/20/2022]
Abstract
We report the synthesis, characterization, photophysical and electrochemical behaviour and biological labelling applications of new phosphorogenic bioorthogonal probes derived from iridium(III) polypyridine complexes containing a 1,2,4,5-tetrazine moiety. In contrast to common luminescent cyclometallated iridium(III) polypyridine complexes, these tetrazine complexes are almost non-emissive due to effective Förster resonance energy transfer (FRET) and/or photoinduced electron transfer (PET) from the excited iridium(III) polypyridine unit to the appended tetrazine moiety. However, they exhibited significant emission enhancement upon reacting with (1R,8S,9s)-bicyclo[6.1.0]non-4-yn-9-ylmethanol (BCN-OH) (ca. 19.5-121.9 fold) and BCN-modified bovine serum albumin (BCN-BSA) (ca. 140.8-1133.7 fold) as a result of the conversion of the tetrazine unit to a non-quenching pyridazine derivative. The complexes were applied to image azide-modified glycans in live cells using a homobifunctional crosslinker, 1,13-bis((1R,8S,9s)-bicyclo[6.1.0]non-4-yn-9-ylmethyloxycarbonylamino)-4,7,10-trioxatridecane (bis-BCN).
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Affiliation(s)
- Steve Po-Yam Li
- Department of Biology and Chemistry, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China
| | - Alex Man-Hei Yip
- Department of Biology and Chemistry, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China
| | - Hua-Wei Liu
- Department of Biology and Chemistry, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China
| | - Kenneth Kam-Wing Lo
- Department of Biology and Chemistry, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China; State Key Laboratory of Millimeter Waves, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China.
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40
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Yonamine Y, Cervantes-Salguero K, Minami K, Kawamata I, Nakanishi W, Hill JP, Murata S, Ariga K. Supramolecular 1-D polymerization of DNA origami through a dynamic process at the 2-dimensionally confined air-water interface. Phys Chem Chem Phys 2016; 18:12576-81. [PMID: 27091668 DOI: 10.1039/c6cp01586g] [Citation(s) in RCA: 66] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this study, a Langmuir-Blodgett (LB) system has been utilized for the regulation of polymerization of a DNA origami structure at the air-water interface as a two-dimensionally confined medium, which enables dynamic condensation of DNA origami units through variation of the film area at the macroscopic level (ca. 10-100 cm(2)). DNA origami sheets were conjugated with a cationic lipid (dioctadecyldimethylammonium bromide, 2C18N(+)) by electrostatic interaction and the corresponding LB-film was prepared. By applying dynamic pressure variation through compression-expansion processes, the lipid-modified DNA origami sheets underwent anisotropic polymerization forming a one-dimensionally assembled belt-shaped structure of a high aspect ratio although the thickness of the polymerized DNA origami was maintained at the unimolecular level. This approach opens up a new field of mechanical induction of the self-assembly of DNA origami structures.
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Affiliation(s)
- Yusuke Yonamine
- World Premier International (WPI) Research Centre for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS) 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan.
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41
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Ariga K, Minami K, Ebara M, Nakanishi J. What are the emerging concepts and challenges in NANO? Nanoarchitectonics, hand-operating nanotechnology and mechanobiology. Polym J 2016. [DOI: 10.1038/pj.2016.8] [Citation(s) in RCA: 155] [Impact Index Per Article: 19.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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42
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Ariga K, Li J, Fei J, Ji Q, Hill JP. Nanoarchitectonics for Dynamic Functional Materials from Atomic-/Molecular-Level Manipulation to Macroscopic Action. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2016; 28:1251-86. [PMID: 26436552 DOI: 10.1002/adma.201502545] [Citation(s) in RCA: 291] [Impact Index Per Article: 36.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2015] [Revised: 07/27/2015] [Indexed: 05/21/2023]
Abstract
Objects in all dimensions are subject to translational dynamism and dynamic mutual interactions, and the ability to exert control over these events is one of the keys to the synthesis of functional materials. For the development of materials with truly dynamic functionalities, a paradigm shift from "nanotechnology" to "nanoarchitectonics" is proposed, with the aim of design and preparation of functional materials through dynamic harmonization of atomic-/molecular-level manipulation and control, chemical nanofabrication, self-organization, and field-controlled organization. Here, various examples of dynamic functional materials are presented from the atom/molecular-level to macroscopic dimensions. These systems, including atomic switches, molecular machines, molecular shuttles, motional crystals, metal-organic frameworks, layered assemblies, gels, supramolecular assemblies of biomaterials, DNA origami, hollow silica capsules, and mesoporous materials, are described according to their various dynamic functions, which include short-term plasticity, long-term potentiation, molecular manipulation, switchable catalysis, self-healing properties, supramolecular chirality, morphological control, drug storage and release, light-harvesting, mechanochemical transduction, molecular tuning molecular recognition, hand-operated nanotechnology.
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Affiliation(s)
- Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, 305-0044, Japan
| | - Junbai Li
- Beijing National Laboratory for Molecular Science, CAS Key Lab of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Science, Beijing, 100190, P. R. China
| | - Jinbo Fei
- Beijing National Laboratory for Molecular Science, CAS Key Lab of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Science, Beijing, 100190, P. R. China
| | - Qingmin Ji
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, 305-0044, Japan
| | - Jonathan P Hill
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, 305-0044, Japan
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43
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Ariga K, Naito M, Ji Q, Payra D. Molecular cavity nanoarchitectonics for biomedical application and mechanical cavity manipulation. CrystEngComm 2016. [DOI: 10.1039/c6ce00432f] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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44
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Affiliation(s)
- Katsuhiko ARIGA
- World Premier International (WPI) Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS)
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45
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Malgras V, Ji Q, Kamachi Y, Mori T, Shieh FK, Wu KCW, Ariga K, Yamauchi Y. Templated Synthesis for Nanoarchitectured Porous Materials. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2015. [DOI: 10.1246/bcsj.20150143] [Citation(s) in RCA: 484] [Impact Index Per Article: 53.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Victor Malgras
- World Premier International (WPI) Research Center for Materials Nanoarchitechtonics (MANA), National Institute for Materials Science (NIMS)
| | - Qingmin Ji
- World Premier International (WPI) Research Center for Materials Nanoarchitechtonics (MANA), National Institute for Materials Science (NIMS)
| | - Yuichiro Kamachi
- World Premier International (WPI) Research Center for Materials Nanoarchitechtonics (MANA), National Institute for Materials Science (NIMS)
| | - Taizo Mori
- World Premier International (WPI) Research Center for Materials Nanoarchitechtonics (MANA), National Institute for Materials Science (NIMS)
- Liquid Crystal Institute, Chemical Physics Interdisciplinary Program, Kent State University
| | - Fa-Kuen Shieh
- Department of Chemistry, National Central University
| | - Kevin C.-W. Wu
- Department of Chemical Engineering, National Taiwan University
| | - Katsuhiko Ariga
- World Premier International (WPI) Research Center for Materials Nanoarchitechtonics (MANA), National Institute for Materials Science (NIMS)
| | - Yusuke Yamauchi
- World Premier International (WPI) Research Center for Materials Nanoarchitechtonics (MANA), National Institute for Materials Science (NIMS)
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46
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Ishikawa D, Mori T, Yonamine Y, Nakanishi W, Cheung DL, Hill JP, Ariga K. Mechanochemical Tuning of the Binaphthyl Conformation at the Air-Water Interface. Angew Chem Int Ed Engl 2015; 54:8988-91. [PMID: 26073773 DOI: 10.1002/anie.201503363] [Citation(s) in RCA: 90] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2015] [Revised: 05/14/2015] [Indexed: 11/11/2022]
Abstract
Gradual and reversible tuning of the torsion angle of an amphiphilic chiral binaphthyl, from -90° to -80°, was achieved by application of a mechanical force to its molecular monolayer at the air-water interface. This 2D interface was an ideal location for mechanochemistry for molecular tuning and its experimental and theoretical analysis, since this lowered dimension enables high orientation of molecules and large variation in the area. A small mechanical energy (<1 kcal mol(-1) ) was applied to the monolayer, causing a large variation (>50 %) in the area of the monolayer and modification of binaphthyl conformation. Single-molecule simulations revealed that mechanical energy was converted proportionally to torsional energy. Molecular dynamics simulations of the monolayer indicated that the global average torsion angle of a monolayer was gradually shifted.
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Affiliation(s)
- Daisuke Ishikawa
- World Premier International (WPI) Research Centre for Materials, Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki (Japan) http://www.nims.go.jp/super/HP/E_home.htm.,CREST, JST, Sanbancho, Chiyoda-ku, 102-0075, Tokyo (Japan)
| | - Taizo Mori
- World Premier International (WPI) Research Centre for Materials, Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki (Japan) http://www.nims.go.jp/super/HP/E_home.htm.,CREST, JST, Sanbancho, Chiyoda-ku, 102-0075, Tokyo (Japan)
| | - Yusuke Yonamine
- World Premier International (WPI) Research Centre for Materials, Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki (Japan) http://www.nims.go.jp/super/HP/E_home.htm.,CREST, JST, Sanbancho, Chiyoda-ku, 102-0075, Tokyo (Japan)
| | - Waka Nakanishi
- World Premier International (WPI) Research Centre for Materials, Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki (Japan) http://www.nims.go.jp/super/HP/E_home.htm.
| | - David L Cheung
- Department of Pure and Applied Chemistry, University of Strathclyde, Glasgow (UK). .,Present address: School of Chemistry, National University of Ireland Galway, Galway (Ireland).
| | - Jonathan P Hill
- World Premier International (WPI) Research Centre for Materials, Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki (Japan) http://www.nims.go.jp/super/HP/E_home.htm.,CREST, JST, Sanbancho, Chiyoda-ku, 102-0075, Tokyo (Japan)
| | - Katsuhiko Ariga
- World Premier International (WPI) Research Centre for Materials, Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Ibaraki (Japan) http://www.nims.go.jp/super/HP/E_home.htm. .,CREST, JST, Sanbancho, Chiyoda-ku, 102-0075, Tokyo (Japan).
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Ishikawa D, Mori T, Yonamine Y, Nakanishi W, Cheung DL, Hill JP, Ariga K. Mechanochemical Tuning of the Binaphthyl Conformation at the Air-Water Interface. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201503363] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Affiliation(s)
- Xiaolong Sun
- Department
of Chemistry, University of Bath, Bath, BA2 7AY, United Kingdom
| | - Tony D. James
- Department
of Chemistry, University of Bath, Bath, BA2 7AY, United Kingdom
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You L, Zha D, Anslyn EV. Recent Advances in Supramolecular Analytical Chemistry Using Optical Sensing. Chem Rev 2015; 115:7840-92. [PMID: 25719867 DOI: 10.1021/cr5005524] [Citation(s) in RCA: 624] [Impact Index Per Article: 69.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Lei You
- †State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou, 35002, People's Republic of China
| | - Daijun Zha
- †State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou, 35002, People's Republic of China
| | - Eric V Anslyn
- ‡Department of Chemistry, The University of Texas at Austin, Austin, Texas 78712, United States
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