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Ma Y, Zhang Y, Huang Y, Chen Z, Xian Q, Su R, Jiang Q, Wang X, Xiao G. One-Pot Assembly of Mannose-Capped Lipoarabinomannan Motifs up to 101-Mer from the Mycobacterium tuberculosis Cell Wall. J Am Chem Soc 2024; 146:4112-4122. [PMID: 38226918 DOI: 10.1021/jacs.3c12815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2024]
Abstract
Lipoarabinomannan (LAM) from the Mycobacterium tuberculosis cell envelope represents important targets for the development of new therapeutic agents against tuberculosis, which is a deadly disease that has plagued mankind for a long time. However, the accessibility of long, branched, and complex lipoarabinomannan over 100-mer remains a long-standing challenge. Herein, we report the modular synthesis of mannose-capped lipoarabinomannan 101-mer from the M. tuberculosis cell wall using a one-pot assembly strategy on the basis of glycosyl ortho-(1-phenylvinyl)benzoates (PVB), which not only accelerates the modular synthesis but also precludes the potential problems associated with one-pot glycosylation with thioglycosides. Shorter sequences including 18-mer, 19-mer, and 27-mer are also synthesized for in-depth structure-activity relationship biological studies. Current synthetic routes also highlight the following features: (1) streamlined synthesis of various linear and branched glycans using one-pot orthogonal glycosylation on the combination of glycosyl N-phenyltrifluoroacetimidates, glycosyl ortho-alkynylbenzoates, and glycosyl PVB; (2) highly stereoselective construction of 10 1,2-cis-arabinofuranosyl linkages using 5-O-(2-quinolinecarbonyl)-directing 1,2-cis-arabinofuranosylation via a hydrogen-bond-mediated aglycone delivery strategy; and (3) convergent [(18 + 19) × 2 + 27] one-pot synthesis of the 101-mer LAM polysaccharide. The present work demonstrates that this orthogonal one-pot glycosylation strategy can highly streamline the chemical synthesis of long, branched, and complex polysaccharides.
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Affiliation(s)
- Yuxin Ma
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Kunming 650201, China
| | - Yunqin Zhang
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Kunming 650201, China
| | - Yingying Huang
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Kunming 650201, China
- Department of Chemistry, Kunming University, 2 Puxing Road, Kunming 650214, China
| | - Zixi Chen
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Kunming 650201, China
- Department of Chemistry, Kunming University, 2 Puxing Road, Kunming 650214, China
| | - Qingyun Xian
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Kunming 650201, China
| | - Rui Su
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Kunming 650201, China
| | - Qiong Jiang
- Department of Chemistry, Kunming University, 2 Puxing Road, Kunming 650214, China
| | - Xiufang Wang
- Department of Chemistry, Kunming University, 2 Puxing Road, Kunming 650214, China
| | - Guozhi Xiao
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Kunming 650201, China
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2
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Ma W, Kirchhoff JL, Strohmann C, Grabe B, Loh CCJ. Cooperative Bifurcated Chalcogen Bonding and Hydrogen Bonding as Stereocontrolling Elements for Selective Strain-Release Septanosylation. J Am Chem Soc 2023; 145:26611-26622. [PMID: 38032866 PMCID: PMC10722516 DOI: 10.1021/jacs.3c06984] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2023] [Revised: 11/08/2023] [Accepted: 11/08/2023] [Indexed: 12/02/2023]
Abstract
The exploitation of noncovalent interactions (NCIs) is emerging as a vital handle in tackling broad stereoselectivity challenges in synthesis. In particular, there has been significant recent interest in the harnessing of unconventional NCIs to surmount difficult selectivity challenges in glycosylations. Herein, we disclose the exploitation of an unconventional bifurcated chalcogen bonding and hydrogen bonding (HB) network, which paves the way for a robust catalytic strategy into biologically useful seven-membered ring sugars. Through 13C nuclear magnetic resonance (NMR) in situ monitoring, NMR titration experiments, and density functional theory (DFT) modeling, we propose a remarkable contemporaneous activation of multiple functional groups consisting of a bifurcated chalcogen bonding mechanism working hand-in-hand with HB activation. Significantly, the ester moiety installed on the glycosyl donor is critical in the establishment of the postulated ternary complex for stereocontrol. Through the 13C kinetic isotopic effect and kinetic studies, our data corroborated that a dissociative SNi-type mechanism forms the stereocontrolling basis for the excellent α-selectivity.
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Affiliation(s)
- Wenpeng Ma
- Abteilung
Chemische Biologie, Max-Planck-Institut
für Molekulare Physiologie, Otto-Hahn-Straße 11, Dortmund 44227, Germany
- Fakultät
für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, Dortmund 44227, Germany
| | - Jan-Lukas Kirchhoff
- Fakultät
für Chemie und Chemische Biologie, Anorganische Chemie, Technische Universität Dortmund, Otto-Hahn-Straße 6, Dortmund 44227, Germany
| | - Carsten Strohmann
- Fakultät
für Chemie und Chemische Biologie, Anorganische Chemie, Technische Universität Dortmund, Otto-Hahn-Straße 6, Dortmund 44227, Germany
| | - Bastian Grabe
- Fakultät
für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, Dortmund 44227, Germany
| | - Charles C. J. Loh
- Abteilung
Chemische Biologie, Max-Planck-Institut
für Molekulare Physiologie, Otto-Hahn-Straße 11, Dortmund 44227, Germany
- Fakultät
für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, Dortmund 44227, Germany
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3
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Cai J, Yuan X, Kong Y, Hu Y, Li J, Jiang S, Dong C, Ding K. Chemical approaches for the stereocontrolled synthesis of 1,2-cis-β-D-rhamnosides. Chin J Nat Med 2023; 21:886-901. [PMID: 38143103 DOI: 10.1016/s1875-5364(23)60408-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Indexed: 12/26/2023]
Abstract
In carbohydrate chemistry, the stereoselective synthesis of 1,2-cis-glycosides remains a formidable challenge. This complexity is comparable to the synthesis of 1,2-cis-β-D-mannosides, primarily due to the adverse anomeric and Δ-2 effects. Over the past decades, to attain β-stereoselectivity in D-rhamnosylation, researchers have devised numerous direct and indirect methodologies, including the hydrogen-bond-mediated aglycone delivery (HAD) method, the synthesis of β-D-mannoside paired with C6 deoxygenation, and the combined approach of 1,2-trans-glycosylation and C2 epimerization. This review elaborates on the advancements in β-D-rhamnosylation and its implications for the total synthesis of tiacumicin B and other physiologically relevant glycans.
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Affiliation(s)
- Juntao Cai
- Henan Polysaccharide Research Center, Henan Key Laboratory of Chinese Medicine for Polysaccharides and Drugs Research, Academy of Chinese Medical Sciences, Henan University of Chinese Medicine, Zhengzhou 450046, China.
| | - Xin Yuan
- Henan Polysaccharide Research Center, Henan Key Laboratory of Chinese Medicine for Polysaccharides and Drugs Research, Academy of Chinese Medical Sciences, Henan University of Chinese Medicine, Zhengzhou 450046, China
| | - Yuanfang Kong
- College of Pharmacy, Henan University of Chinese Medicine, Zhengzhou 450046, China
| | - Yulong Hu
- Henan Polysaccharide Research Center, Henan Key Laboratory of Chinese Medicine for Polysaccharides and Drugs Research, Academy of Chinese Medical Sciences, Henan University of Chinese Medicine, Zhengzhou 450046, China
| | - Jieming Li
- Henan Polysaccharide Research Center, Henan Key Laboratory of Chinese Medicine for Polysaccharides and Drugs Research, Academy of Chinese Medical Sciences, Henan University of Chinese Medicine, Zhengzhou 450046, China
| | - Shiqing Jiang
- Henan Polysaccharide Research Center, Henan Key Laboratory of Chinese Medicine for Polysaccharides and Drugs Research, Academy of Chinese Medical Sciences, Henan University of Chinese Medicine, Zhengzhou 450046, China; Department of Oncology, The First Affiliated Hospital of Henan University of Chinese Medicine, Zhengzhou 450000, China.
| | - Chunhong Dong
- Henan Polysaccharide Research Center, Henan Key Laboratory of Chinese Medicine for Polysaccharides and Drugs Research, Academy of Chinese Medical Sciences, Henan University of Chinese Medicine, Zhengzhou 450046, China.
| | - Kan Ding
- Henan Polysaccharide Research Center, Henan Key Laboratory of Chinese Medicine for Polysaccharides and Drugs Research, Academy of Chinese Medical Sciences, Henan University of Chinese Medicine, Zhengzhou 450046, China; Carbohydrate-Based Drug Research Center, CAS Key Laboratory of Receptor Research, State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
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4
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Zuo H, Zhang C, Zhang Y, Niu D. Base-Promoted Glycosylation Allows Protecting Group-Free and Stereoselective O-Glycosylation of Carboxylic Acids. Angew Chem Int Ed Engl 2023; 62:e202309887. [PMID: 37590127 DOI: 10.1002/anie.202309887] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 08/15/2023] [Accepted: 08/16/2023] [Indexed: 08/19/2023]
Abstract
Here we report a simple and general method to achieve fully unprotected, stereoselective glycosylation of carboxylic acids, employing bench-stable allyl glycosyl sulfones as donors. Running the glycosylation reaction under basic conditions was crucial for the efficiencies and selectivities. Both the donor activation stage and the glycosidic bond forming stage of the process are compatible with free hydroxyl groups, thereby allowing for the use of fully unprotected glycosyl donors. This transformation is stereoconvergent, occurs under mild and metal-free conditions at ambient temperature with visible light (455 nm) irradiation, and displays remarkable scope with respect to both reaction partners. Many natural products and commercial drugs, including an acid derived from the complex anticancer agent taxol, were efficiently glycosylated. Experimental studies provide insights into the origin of the stereochemical outcome.
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Affiliation(s)
- Hao Zuo
- Department of Emergency, State Key Laboratory of Biotherapy, West China Hospital, School of Chemical Engineering, Sichuan University, No. 17 Renmin Nan Road, Chengdu, 610041, China
| | - Chen Zhang
- Department of Emergency, State Key Laboratory of Biotherapy, West China Hospital, School of Chemical Engineering, Sichuan University, No. 17 Renmin Nan Road, Chengdu, 610041, China
| | - Yang Zhang
- Department of Emergency, State Key Laboratory of Biotherapy, West China Hospital, School of Chemical Engineering, Sichuan University, No. 17 Renmin Nan Road, Chengdu, 610041, China
| | - Dawen Niu
- Department of Emergency, State Key Laboratory of Biotherapy, West China Hospital, School of Chemical Engineering, Sichuan University, No. 17 Renmin Nan Road, Chengdu, 610041, China
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5
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Carney N, Perry N, Garabedian J, Nagorny P. Development of α-Selective Glycosylation with l-Oleandral and Its Application to the Total Synthesis of Oleandrin. Org Lett 2023; 25:966-971. [PMID: 36739571 DOI: 10.1021/acs.orglett.2c04358] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
This letter describes the development of an α-selective glycosylation using l-oleandrose, a 2-deoxysugar that is frequently found in natural products, and its application to the total synthesis of the natural cardiotonic steroids oleandrin and beaumontoside. To improve the reaction diastereoselectivity and to minimize side-product formation, an extensive evaluation and optimization of the conditions leading to α-selective glycosylation of digitoxigenin with l-oleandrose-based donors was conducted. These studies led to the exploration of 8 different phosphine·acid complexes or salts and yielded HBr·PPh3 as the optimal catalyst, which provided in the cleanest α-glycosylation and produced protected beaumontoside in 67% yield. Subsequent application of these conditions to synthetic oleandrigenin afforded the desired α-product in 69% isolated yield─enabling the completion of the first synthesis of oleandrin in 17 steps (1.2% yield) from testosterone.
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Affiliation(s)
- Nolan Carney
- Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Natasha Perry
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Jacob Garabedian
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Pavel Nagorny
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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6
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Ma Z, Hu Y, Li X, Liu R, Xia E, Xu P, Yang Y. Stereoselective synthesis of α-glucosides with glucosyl (Z)-Ynenoates as donors. Carbohydr Res 2023; 523:108710. [PMID: 36370627 DOI: 10.1016/j.carres.2022.108710] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2022] [Revised: 10/21/2022] [Accepted: 10/26/2022] [Indexed: 11/11/2022]
Abstract
A SPhosAuNTf2-promoted DMF-modulated glycosylation approach with glycosyl (Z)-ynenoates as donors was developed for highly α-selective synthesis of various linkage types of α-glucans. The substituent groups were also found to play a significant role in the α-selective glucosylation reactions. The glycosylation approach was effectively applied to the stereospecific synthesis of the α-1,6-linked triglucoside.
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Affiliation(s)
- Zhi Ma
- Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education, School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, China
| | - Yi Hu
- Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education, School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, China
| | - Xiaona Li
- Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education, School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, China
| | - Rongkun Liu
- Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education, School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, China
| | - E Xia
- Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education, School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, China
| | - Peng Xu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - You Yang
- Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education, School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, China.
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7
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Zou LJ, Yang X, Zhao XR, He H, Zhang D, Song H, Xue F, Qin Y. Iterative Synthesis of Inulin-Type Fructooligosaccharides Enabled by Stereoselective β-d-Fructofuranosylation. J Org Chem 2022; 87:15273-15288. [PMID: 36318096 DOI: 10.1021/acs.joc.2c01849] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Inulin-type fructooligosaccharides (FOSs) constitute an abundant subgroup of fructans with important biological activities. However, the availability of individual fructooligosaccharides with an accurate structure in high purity and quality remains challenging. We herein report the first iterative synthesis of five inulin-type FOSs with degrees of polymerization ranging from 3 to 7 via highly stereoselective β-(2 → 1)-d-fructofuranosylation on a gram scale. Central to the synthesis is the decisive use of the 1-O-TIPS-6-O-picoloyl-protected fructofuranosyl thioglycoside donor, which assured the excellent β-selective glycosylation by the hydrogen-bond-mediated aglycone delivery (HAD).
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Affiliation(s)
- Liang-Jing Zou
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
| | - Xing Yang
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
| | - Xi-Rui Zhao
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
| | - Huan He
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
| | - Dan Zhang
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
| | - Hao Song
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
| | - Fei Xue
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
| | - Yong Qin
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P. R. China
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8
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Zhao Q, Zhou S, Wang Y, Yang X, Meng Y, Zhang Y, Gao J. Stereoselective synthesis of the 3,6-branched Fuzi α-glucans up to 15-mer via a one-pot and convergent glycosylation strategy. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2022.107982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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9
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Lei J, Jiang Y, Xia Y, Fang Q, Duan S, Ruan Y, Yang J. Stereoselective Synthesis of a Tetrasaccharide Fragment from Rhamnogalacturonan
II
Side Chain A. CHINESE J CHEM 2022. [DOI: 10.1002/cjoc.202200177] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Jin‐Cai Lei
- Key Laboratory of Drug‐Targeting and Drug Delivery System of the Education Ministry, Sichuan Engineering Laboratory for Plant‐Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital Sichuan University Chengdu 610041 China
| | - Yuan‐Yuan Jiang
- Key Laboratory of Drug‐Targeting and Drug Delivery System of the Education Ministry, Sichuan Engineering Laboratory for Plant‐Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital Sichuan University Chengdu 610041 China
| | - Yi‐Fei Xia
- Key Laboratory of Drug‐Targeting and Drug Delivery System of the Education Ministry, Sichuan Engineering Laboratory for Plant‐Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital Sichuan University Chengdu 610041 China
| | - Qing Fang
- Key Laboratory of Drug‐Targeting and Drug Delivery System of the Education Ministry, Sichuan Engineering Laboratory for Plant‐Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital Sichuan University Chengdu 610041 China
| | - Shi‐Chao Duan
- Key Laboratory of Drug‐Targeting and Drug Delivery System of the Education Ministry, Sichuan Engineering Laboratory for Plant‐Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital Sichuan University Chengdu 610041 China
| | - Yu‐Xiong Ruan
- Key Laboratory of Drug‐Targeting and Drug Delivery System of the Education Ministry, Sichuan Engineering Laboratory for Plant‐Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital Sichuan University Chengdu 610041 China
| | - Jin‐Song Yang
- Key Laboratory of Drug‐Targeting and Drug Delivery System of the Education Ministry, Sichuan Engineering Laboratory for Plant‐Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital Sichuan University Chengdu 610041 China
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10
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Zhang C, Zuo H, Lee GY, Zou Y, Dang QD, Houk KN, Niu D. Halogen-bond-assisted radical activation of glycosyl donors enables mild and stereoconvergent 1,2-cis-glycosylation. Nat Chem 2022; 14:686-694. [DOI: 10.1038/s41557-022-00918-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2021] [Accepted: 02/28/2022] [Indexed: 02/07/2023]
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11
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Kumar M, Kumar N, Gurawa A, Kashyap S. Stereoselective Synthesis of
α
‐ʟ‐Rhamnopyranosides from ʟ‐Rhamnal Employing Ruthenium‐Catalysis. ChemistrySelect 2022. [DOI: 10.1002/slct.202200963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Manoj Kumar
- Carbohydrate Chemistry Research Laboratory (CCRL) Department of Chemistry Malaviya National Institute of Technology Jaipur (MNIT Jaipur) J. L. N. Marg Jaipur 302 017 INDIA
| | - Nitin Kumar
- Carbohydrate Chemistry Research Laboratory (CCRL) Department of Chemistry Malaviya National Institute of Technology Jaipur (MNIT Jaipur) J. L. N. Marg Jaipur 302 017 INDIA
| | - Aakanksha Gurawa
- Carbohydrate Chemistry Research Laboratory (CCRL) Department of Chemistry Malaviya National Institute of Technology Jaipur (MNIT Jaipur) J. L. N. Marg Jaipur 302 017 INDIA
| | - Sudhir Kashyap
- Carbohydrate Chemistry Research Laboratory (CCRL) Department of Chemistry Malaviya National Institute of Technology Jaipur (MNIT Jaipur) J. L. N. Marg Jaipur 302 017 INDIA
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12
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Liu X, Lin Y, Liu A, Sun Q, Sun H, Xu P, Li G, Song Y, Xie W, Sun H, Yu B, Li W. 2‐Diphenylphosphinonyl
‐acetyl as a Remote Directing Group for the Highly Stereoselective Synthesis of
β‐Glycosides. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202100865] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Xianglai Liu
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Yetong Lin
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Ao Liu
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Qianhui Sun
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Huiyong Sun
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Peng Xu
- State Key Laboratory of Bioorganic and Natural Products Chemistry Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road Shanghai 200032 China
| | - Guolong Li
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Yingying Song
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Weijia Xie
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Haopeng Sun
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Biao Yu
- State Key Laboratory of Bioorganic and Natural Products Chemistry Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road Shanghai 200032 China
| | - Wei Li
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
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13
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Exploiting non-covalent interactions in selective carbohydrate synthesis. Nat Rev Chem 2021; 5:792-815. [PMID: 37117666 DOI: 10.1038/s41570-021-00324-y] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/10/2021] [Indexed: 02/08/2023]
Abstract
Non-covalent interactions (NCIs) are a vital component of biological bond-forming events, and have found important applications in multiple branches of chemistry. In recent years, the biomimetic exploitation of NCIs in challenging glycosidic bond formation and glycofunctionalizations has attracted significant interest across diverse communities of organic and carbohydrate chemists. This emerging theme is a major new direction in contemporary carbohydrate chemistry, and is rapidly gaining traction as a robust strategy to tackle long-standing issues such as anomeric and site selectivity. This Review thus seeks to provide a bird's-eye view of wide-ranging advances in harnessing NCIs within the broad field of synthetic carbohydrate chemistry. These include the exploitation of NCIs in non-covalent catalysed glycosylations, in non-covalent catalysed glycofunctionalizations, in aglycone delivery, in stabilization of intermediates and transition states, in the existence of intramolecular hydrogen bonding networks and in aggregation by hydrogen bonds. In addition, recent emerging opportunities in exploiting halogen bonding and other unconventional NCIs, such as CH-π, cation-π and cation-n interactions, in various aspects of carbohydrate chemistry are also examined.
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14
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Fittolani G, Tyrikos-Ergas T, Vargová D, Chaube MA, Delbianco M. Progress and challenges in the synthesis of sequence controlled polysaccharides. Beilstein J Org Chem 2021; 17:1981-2025. [PMID: 34386106 PMCID: PMC8353590 DOI: 10.3762/bjoc.17.129] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Accepted: 07/22/2021] [Indexed: 01/15/2023] Open
Abstract
The sequence, length and substitution of a polysaccharide influence its physical and biological properties. Thus, sequence controlled polysaccharides are important targets to establish structure-properties correlations. Polymerization techniques and enzymatic methods have been optimized to obtain samples with well-defined substitution patterns and narrow molecular weight distribution. Chemical synthesis has granted access to polysaccharides with full control over the length. Here, we review the progress towards the synthesis of well-defined polysaccharides. For each class of polysaccharides, we discuss the available synthetic approaches and their current limitations.
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Affiliation(s)
- Giulio Fittolani
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Theodore Tyrikos-Ergas
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Denisa Vargová
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Manishkumar A Chaube
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Martina Delbianco
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
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15
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Cai D, Bian Y, Wu S, Ding K. Conformation-Controlled Hydrogen-Bond-Mediated Aglycone Delivery Method for α-Xylosylation. J Org Chem 2021; 86:9945-9960. [PMID: 34292734 DOI: 10.1021/acs.joc.1c00187] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
α-Xylosylated glycans and xylosyl derivatives are biomedically important molecules which show numerous bioactivities against infection, cancer, inflammation, and so on. Lacking an efficient α-xylosylation method, the synthesis of α-xyloside-containing molecules was full of challenges. Herein, a robust method is presented for selective α-xylosylation via combination of a rare conformation-controlled strategy and the hydrogen-bond-mediated aglycone delivery method. Various native branched α-xyloside structures necessitate an orthogonally protected xyloside, and a three-pot preparation method of the xylosyl donor was developed for this novel α-xylosylation method, which was further applied in the first synthesis of the side chain N of xyloglucan. This work provides an efficient α-xylosylation method which would make various α-xyloside structures achievable. The conformation-controlled strategy also has important reference to the chemistry of five-carbon pyranose.
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Affiliation(s)
- Deqin Cai
- University of Chinese Academy of Sciences, Beijing 100049, China.,Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
| | - Ya Bian
- Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.,Interdisciplinary Science Research Institute, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China
| | - Shengjie Wu
- University of Chinese Academy of Sciences, Beijing 100049, China.,Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
| | - Kan Ding
- University of Chinese Academy of Sciences, Beijing 100049, China.,Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
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16
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Abstract
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Polysaccharides are
Nature’s most abundant biomaterials
essential for plant cell wall construction and energy storage. Seemingly
minor structural differences result in entirely different functions:
cellulose, a β (1–4) linked glucose polymer, forms fibrils
that can support large trees, while amylose, an α (1–4)
linked glucose polymer forms soft hollow fibers used for energy storage.
A detailed understanding of polysaccharide structures requires pure
materials that cannot be isolated from natural sources. Automated
Glycan Assembly provides quick access to trans-linked
glycans analogues of cellulose, but the stereoselective installation
of multiple cis-glycosidic linkages present in amylose
has not been possible to date. Here, we identify thioglycoside building
blocks with different protecting group patterns that, in concert with
temperature and solvent control, achieve excellent stereoselectivity
during the synthesis of linear and branched α-glucan polymers
with up to 20 cis-glycosidic linkages. The molecules
prepared with the new method will serve as probes to understand the
biosynthesis and the structure of α-glucans.
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Affiliation(s)
- Yuntao Zhu
- Max Planck Institute for Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Martina Delbianco
- Max Planck Institute for Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Peter H Seeberger
- Max Planck Institute for Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.,Institute for Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
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17
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Zhang Y, He H, Chen Z, Huang Y, Xiang G, Li P, Yang X, Lu G, Xiao G. Merging Reagent Modulation and Remote Anchimeric Assistance for Glycosylation: Highly Stereoselective Synthesis of α‐Glycans up to a 30‐mer. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202103826] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Yunqin Zhang
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
| | - Haiqing He
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
| | - Zixi Chen
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
| | - Yingying Huang
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
| | - Guisheng Xiang
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
| | - Penghua Li
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
| | - Xingkuan Yang
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
| | - Gang Lu
- Key Laboratory of Colloid and Interface Chemistry Ministry of Education School of Chemistry and Chemical Engineering State Key Laboratory of Crystal Materials Shandong University Jinan Shandong 250100 China
| | - Guozhi Xiao
- State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of Botany University of Chinese Academy of Sciences Chinese Academy of Sciences 132 Lanhei Road Kunming 650201 China
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18
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Zhang Y, He H, Chen Z, Huang Y, Xiang G, Li P, Yang X, Lu G, Xiao G. Merging Reagent Modulation and Remote Anchimeric Assistance for Glycosylation: Highly Stereoselective Synthesis of α-Glycans up to a 30-mer. Angew Chem Int Ed Engl 2021; 60:12597-12606. [PMID: 33763930 DOI: 10.1002/anie.202103826] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Indexed: 12/12/2022]
Abstract
The efficient synthesis of long, branched, and complex carbohydrates containing multiple 1,2-cis glycosidic linkages is a long-standing challenge. Here, we report a merging reagent modulation and 6-O-levulinoyl remote anchimeric assistance glycosylation strategy, which is successfully applied to the first highly stereoselective synthesis of the branched Dendrobium Huoshanense glycans and the linear Longan glycans containing up to 30 contiguous 1,2-cis glucosidic bonds. DFT calculations shed light on the origin of the much higher stereoselectivities of 1,2-cis glucosylation with 6-O-levulinoyl group than 6-O-acetyl or 6-O-benzoyl groups. Orthogonal one-pot glycosylation strategy based on glycosyl ortho-alkynylbenzoates and ortho-(1-phenylvinyl)benzoates has been demonstrated in the efficient synthesis of complex glycans, precluding such issues as aglycon transfer inherent to orthogonal one-pot synthesis based on thioglycosides.
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Affiliation(s)
- Yunqin Zhang
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Haiqing He
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Zixi Chen
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Yingying Huang
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Guisheng Xiang
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Penghua Li
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Xingkuan Yang
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Gang Lu
- Key Laboratory of Colloid and Interface Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, State Key Laboratory of Crystal Materials, Shandong University, Jinan, Shandong, 250100, China
| | - Guozhi Xiao
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
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19
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Khanam A, Kumar Mandal P. Influence of Remote Picolinyl and Picoloyl Stereodirecting Groups for the Stereoselective Glycosylation. ASIAN J ORG CHEM 2020. [DOI: 10.1002/ajoc.202000558] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Ariza Khanam
- Medicinal and Process Chemistry Division CSIR-Central Drug Research Institute Sector 10, Jankipuram extn., Sitapur Road Lucknow 226 031 India
| | - Pintu Kumar Mandal
- Medicinal and Process Chemistry Division CSIR-Central Drug Research Institute Sector 10, Jankipuram extn., Sitapur Road Lucknow 226 031 India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad 201002 India
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20
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Shadrick M, Singh Y, Demchenko AV. Stereocontrolled α-Galactosylation under Cooperative Catalysis. J Org Chem 2020; 85:15936-15944. [PMID: 33064474 PMCID: PMC8142852 DOI: 10.1021/acs.joc.0c01279] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
A recent discovery of a cooperative catalysis comprising a silver salt and an acid led to a dramatic improvement in the way glycosyl halides are glycosidated. Excellent yields have been achieved, but the stereoselectivity achieved with 2-O-benzylated donors was poor. Reported herein is our first attempt to refine the stereoselectivity of the cooperatively catalyzed galactosylation reaction. Careful optimization of the reaction conditions along with studying effects of the remote protecting groups led to excellent stereocontrol of α-galactosylation of a variety of glycosyl acceptors with differentially protected galactosyl donors.
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Affiliation(s)
- Melanie Shadrick
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, St. Louis, Missouri 63121, United States
| | - Yashapal Singh
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, St. Louis, Missouri 63121, United States
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21
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Pal KB, Guo A, Das M, Lee J, Báti G, Yip BRP, Loh TP, Liu XW. Iridium-promoted deoxyglycoside synthesis: stereoselectivity and mechanistic insight. Chem Sci 2020; 12:2209-2216. [PMID: 34163986 PMCID: PMC8179265 DOI: 10.1039/d0sc06529c] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
Herein, we devised a method for stereoselective O-glycosylation using an Ir(i)-catalyst which enables both hydroalkoxylation and nucleophilic substitution of glycals with varying substituents at the C3 position. In this transformation, 2-deoxy-α-O-glycosides were acquired when glycals equipped with a notoriously poor leaving group at C3 were used; in contrast 2,3-unsaturated-α-O-glycosides were produced from glycals that bear a good leaving group at C3. Mechanistic studies indicate that both reactions proceed via the directing mechanism, through which the acceptor coordinates to the Ir(i) metal in the α-face-coordinated Ir(i)-glycal π-complex and then attacks the glycal that contains the O-glycosidic bond in a syn-addition manner. This protocol exhibits good functional group tolerance and is exemplified with the preparation of a library of oligosaccharides in moderate to high yields and with excellent stereoselectivities. Ir(i)-catalyzed α-selective O-glycosylation of glycals provided an access to both 2-deoxyglycosides and 2,3-unsaturated glycosides with a broad substrate scope. The underlying rationale of α-selectivity has been illustrated by the DFT study.![]()
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Affiliation(s)
- Kumar Bhaskar Pal
- Institute of Advanced Synthesis, Northwestern Polytechnical University Xi'an 710072 China.,Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371
| | - Aoxin Guo
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371
| | - Mrinmoy Das
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371
| | - Jiande Lee
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371 .,Nanyang Environment and Water Research Institute, Nanyang Technological University 1 Cleantech Loop Singapore 637141
| | - Gábor Báti
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371
| | - Benjamin Rui Peng Yip
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371
| | - Teck-Peng Loh
- Institute of Advanced Synthesis, Northwestern Polytechnical University Xi'an 710072 China.,Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371 .,Yangtze River Delta Research Institute of Northwestern Polytechnical University Taicang Jiangsu 215400 China
| | - Xue-Wei Liu
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University 21 Nanyang Link Singapore 637371
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22
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Alex C, Visansirikul S, Demchenko AV. A versatile approach to the synthesis of mannosamine glycosides. Org Biomol Chem 2020; 18:6682-6695. [PMID: 32813001 DOI: 10.1039/d0ob01640c] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
O-Picoloyl protecting groups at remote positions can affect the stereoselectivity of glycosylation by means of the H-bond-mediated aglycone delivery (HAD) pathway. A new practical method for the stereoselective synthesis of β-glycosides of mannosamine is reported. The presence of the O-picoloyl group at the C-3 position of a mannosamine donor can provide high or complete stereocontrol. The method was also utilized for the synthesis of a biologically relevant trisaccharide related to the capsular polysaccharide of Streptococcus pneumoniae serotype 4. Also reported herein is a method to achieve complete α-manno stereoselectivity with mannosamine donors equipped with 3-O-benzoyl group.
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Affiliation(s)
- Catherine Alex
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, MO 63121, USA.
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23
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Abronina PI, Zinin AI, Chizhov AO, Kononov LO. Unusual Outcome of Glycosylation: Hydrogen‐Bond Mediated Control of Stereoselectivity by
N
‐Trifluoroacetyl Group? European J Org Chem 2020. [DOI: 10.1002/ejoc.202000520] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Polina I. Abronina
- N.K. Kochetkov Laboratory of Carbohydrate Chemistry N.D. Zelinsky Institute of Organic Chemistry Leninsky prosp. 47 119991 Moscow Russian Federation
| | - Alexander I. Zinin
- N.K. Kochetkov Laboratory of Carbohydrate Chemistry N.D. Zelinsky Institute of Organic Chemistry Leninsky prosp. 47 119991 Moscow Russian Federation
| | - Alexander O. Chizhov
- N.K. Kochetkov Laboratory of Carbohydrate Chemistry N.D. Zelinsky Institute of Organic Chemistry Leninsky prosp. 47 119991 Moscow Russian Federation
| | - Leonid O. Kononov
- N.K. Kochetkov Laboratory of Carbohydrate Chemistry N.D. Zelinsky Institute of Organic Chemistry Leninsky prosp. 47 119991 Moscow Russian Federation
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24
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Geringer SA, Mannino MP, Bandara MD, Demchenko AV. Picoloyl protecting group in synthesis: focus on a highly chemoselective catalytic removal. Org Biomol Chem 2020; 18:4863-4871. [PMID: 32608450 DOI: 10.1039/d0ob00803f] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The picoloyl ester (Pico) has proven to be a versatile protecting group in carbohydrate chemistry. It can be used for the purpose of stereocontrolling glycosylations via an H-bond-mediated Aglycone Delivery (HAD) method. It can also be used as a temporary protecting group that can be efficiently introduced and chemoselectively cleaved in the presence of practically all other common protecting groups used in synthesis. Herein, we will describe a new method for rapid, catalytic, and highly chemoselective removal of the picoloyl group using inexpensive copper(ii) or iron(iii) salts.
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Affiliation(s)
- Scott A Geringer
- Department of Chemistry and Biochemistry, University of Missouri - St Louis, One University Boulevard, St Louis, MO 63121, USA.
| | - Michael P Mannino
- Department of Chemistry and Biochemistry, University of Missouri - St Louis, One University Boulevard, St Louis, MO 63121, USA.
| | - Mithila D Bandara
- Department of Chemistry and Biochemistry, University of Missouri - St Louis, One University Boulevard, St Louis, MO 63121, USA.
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St Louis, One University Boulevard, St Louis, MO 63121, USA.
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25
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Affiliation(s)
- Gustavo A. Kashiwagi
- Centro de Investigaciones en Hidratos de Carbono (CIHIDECAR)CONICET- Universidad de Buenos Aires Intendente Güiraldes 2160, Pabellón II 3°Piso, Ciudad Universitaria C1428EHA Ciudad Autónoma de Buenos Aires Argentina
- Departamento de QuímicaUniversidad Nacional del Oeste Belgrano 369 San Antonio de Padua Provincia de Buenos Aires Argentina
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26
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Wang P, Mo Y, Cui X, Ding X, Zhang X, Li Z. Hydrogen-Bond-Mediated Aglycone Delivery: Synthesis of β-d-Fructofuranosides. Org Lett 2020; 22:2967-2971. [PMID: 32223203 DOI: 10.1021/acs.orglett.0c00702] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
The construction of β-d-fructofuranosidic linkages is one of the major challenges in carbohydrate chemistry. In this work, we developed an efficient method for the synthesis of β-d-fructofuranosides by using a 6-picoloyl-protected fructofuranosyl thioglycoside as the glycosyl donor. Subsequently, we applied the approach to a wide variety of donors and acceptors. Furthermore, the successful synthesis of levantetrose confirmed its applicability in the multistep synthesis of oligosaccharides.
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Affiliation(s)
- Pan Wang
- State Key Laboratory of Natural and Biomimetic Drugs, Department of Chemical Biology, School of Pharmaceutical Sciences, Peking University, Beijing 100191, P. R. China
| | - Yidian Mo
- State Key Laboratory of Natural and Biomimetic Drugs, Department of Chemical Biology, School of Pharmaceutical Sciences, Peking University, Beijing 100191, P. R. China
| | - Xiaoyu Cui
- State Key Laboratory of Natural and Biomimetic Drugs, Department of Chemical Biology, School of Pharmaceutical Sciences, Peking University, Beijing 100191, P. R. China
| | - Xuyang Ding
- State Key Laboratory of Natural and Biomimetic Drugs, Department of Chemical Biology, School of Pharmaceutical Sciences, Peking University, Beijing 100191, P. R. China
| | - Xiao Zhang
- State Key Laboratory of Natural and Biomimetic Drugs, Department of Chemical Biology, School of Pharmaceutical Sciences, Peking University, Beijing 100191, P. R. China
| | - Zhongjun Li
- State Key Laboratory of Natural and Biomimetic Drugs, Department of Chemical Biology, School of Pharmaceutical Sciences, Peking University, Beijing 100191, P. R. China
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27
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Mannino MP, Demchenko AV. Synthesis of β-Glucosides with 3-O-Picoloyl-Protected Glycosyl Donors in the Presence of Excess Triflic Acid: A Mechanistic Study. Chemistry 2020; 26:2927-2937. [PMID: 31886924 DOI: 10.1002/chem.201905277] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2019] [Indexed: 12/26/2022]
Abstract
Our previous study showed that picoloylated donors are capable of providing excellent facial stereoselectivity through the H-bond-mediated aglycone delivery (HAD) pathway. Presented herein is a detailed mechanistic study of stereoselective glycosylation with 3-O-picoloylated glucosyl donors. While reactions of glycosyl donors equipped with the 3-O-benzoyl group are typically non-stereoselective because these reactions proceed via the oxacarbenium intermediate, 3-O-picoloylated donors are capable of providing enhanced, but somewhat relaxed, β-stereoselectivity by the HAD pathway. In an attempt to refine this reaction, we noticed that glycosylations are highly β-stereoselective in the presence of NIS and stoichiometric TfOH. The HAD pathway is highly unlikely because the picoloyl nitrogen is protonated under these reaction conditions. The protonation and glycosylation were studied by low-temperature NMR, and the intermediacy of the glycosyl triflate has been observed. This article is dedicated to broadening the scope of this reaction in application to a variety of substrates and targets.
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Affiliation(s)
- Michael P Mannino
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA
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28
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Kundu M, Gucchait A, Misra AK. Convergent synthesis of a pentasaccharide corresponding to the cell wall O-polysaccharide of enteropathogenic Escherichia coli O115. Tetrahedron 2020. [DOI: 10.1016/j.tet.2020.130952] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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29
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Liu DM, Wang HL, Lei JC, Zhou XY, Yang JS. A Highly α-Stereoselective Sialylation Method Using 4-O
-4-Nitropicoloyl Thiosialoside Donor. European J Org Chem 2020. [DOI: 10.1002/ejoc.201901587] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Dong-Mei Liu
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy; Sichuan University; 610041 Chengdu China
| | - Hong-Ling Wang
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy; Sichuan University; 610041 Chengdu China
| | - Jin-Cai Lei
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy; Sichuan University; 610041 Chengdu China
| | - Xian-Yang Zhou
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy; Sichuan University; 610041 Chengdu China
| | - Jin-Song Yang
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy; Sichuan University; 610041 Chengdu China
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30
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Geng X, Wang G, Guo Z, Gu G. Synthesis of the Oligosaccharides of Burkholderia pseudomallei and B. mallei Capsular Polysaccharide and Preliminary Immunological Studies of Their Protein Conjugates. J Org Chem 2020; 85:2369-2384. [DOI: 10.1021/acs.joc.9b03085] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xueyun Geng
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Road, Qingdao 266237, China
| | - Guirong Wang
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Road, Qingdao 266237, China
| | - Zhongwu Guo
- Department of Chemistry, University of Florida, 214 Leigh Hall, Gainesville, Florida 32611, United States
| | - Guofeng Gu
- National Glycoengineering Research Center and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 72 Binhai Road, Qingdao 266237, China
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31
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Zhao Q, Zhang H, Zhang Y, Zhou S, Gao J. Stereoselective synthesis of a branched α-decaglucan. Org Biomol Chem 2020; 18:6549-6557. [PMID: 32789329 DOI: 10.1039/d0ob01402h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
The first and convergent synthesis of a branched Arca subcrenata Lischke α-decaglucan containing all of the α-(1 → 3), α-(1 → 4), and α-(1 → 6) glycosyl linkages was efficiently achieved. The tri- and tetrasaccharide fragments and fully protected decasaccharide were assembled in a one-pot manner with excellent α-stereoselectivity, which was secured by the synergistic α-directing effects of the TolSCl/AgOTf catalysis system and the remote participation effect or steric β-shielding of functionalized groups at the donor 6-O-position. Low substrate concentration was revealed to favor the α-stereochemical outcome of glycosylations between bulkier building blocks. The synthetic approach established here would be very useful for the preparation of more complex α-glucans containing different types of glycosidic linkages and branched architectures.
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Affiliation(s)
- Qingpeng Zhao
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China.
| | - Han Zhang
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China.
| | - Yanxin Zhang
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China.
| | - Shihao Zhou
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China.
| | - Jian Gao
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China.
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32
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Jones B, Behm A, Shadrick M, Geringer SA, Escopy S, Lohman M, De Meo C. Comparative Study on the Effects of Picoloyl Groups in Sialylations Based on Their Substitution Pattern. J Org Chem 2019; 84:15052-15062. [DOI: 10.1021/acs.joc.9b01492] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Bradley Jones
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, Illinois 62025, United States
| | - Alexanndra Behm
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, Illinois 62025, United States
| | - Melanie Shadrick
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, Illinois 62025, United States
| | - Scott A. Geringer
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, Illinois 62025, United States
| | - Samira Escopy
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, Illinois 62025, United States
| | - Matthew Lohman
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, Illinois 62025, United States
| | - Cristina De Meo
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, Illinois 62025, United States
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33
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Lei JC, Ruan YX, Luo S, Yang JS. Stereodirecting Effect of C3-Ester Groups on the Glycosylation Stereochemistry of L-Rhamnopyranose Thioglycoside Donors: Stereoselective Synthesis of α- and β-L-Rhamnopyranosides. European J Org Chem 2019. [DOI: 10.1002/ejoc.201901186] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Jin-Cai Lei
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital; Sichuan University; 610041 Chengdu China
| | - Yu-Xiong Ruan
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital; Sichuan University; 610041 Chengdu China
| | - Sheng Luo
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital; Sichuan University; 610041 Chengdu China
| | - Jin-Song Yang
- Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry; Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology; West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital; Sichuan University; 610041 Chengdu China
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34
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Pistorio SG, Geringer SA, Stine KJ, Demchenko AV. Manual and Automated Syntheses of the N-Linked Glycoprotein Core Glycans. J Org Chem 2019; 84:6576-6588. [PMID: 31066275 DOI: 10.1021/acs.joc.8b03056] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Presented herein are two complementary approaches to the synthesis of the core N-glycan pentasaccharide. The first, a traditional manual approach in solution, makes use of the H-bond-mediated aglycone delivery method for the highly diastereoselective introduction of the β-mannosidic linkage at room temperature. The synthesis of the core pentasaccharide was also accomplished using an high-performance liquid chromatography-assisted automated approach. The overall assembly was swift (8 h) and efficient (31%).
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Affiliation(s)
- Salvatore G Pistorio
- Department of Chemistry and Biochemistry , University of Missouri-St. Louis One University Boulevard , St. Louis , Missouri 63121 , United States
| | - Scott A Geringer
- Department of Chemistry and Biochemistry , University of Missouri-St. Louis One University Boulevard , St. Louis , Missouri 63121 , United States
| | - Keith J Stine
- Department of Chemistry and Biochemistry , University of Missouri-St. Louis One University Boulevard , St. Louis , Missouri 63121 , United States
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry , University of Missouri-St. Louis One University Boulevard , St. Louis , Missouri 63121 , United States
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35
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Yalamanchili S, Lloyd D, Bennett CS. Synthesis of the Hexasaccharide Fragment of Landomycin A Using a Mild, Reagent-Controlled Approach. Org Lett 2019; 21:3674-3677. [PMID: 31021647 DOI: 10.1021/acs.orglett.9b01118] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The synthesis of the hexasaccharide fragment of landomycin A is reported. Using p-toluenesulfonyl chloride mediated dehydrative glycosylation, we constructed the deoxy-sugar linkages in a stereoselective fashion without the need for temporary prosthetic groups to control selectivity. Through this approach, the hexasaccharide was obtained in 28 steps and 8.9% overall yield, which is an order of magnitude higher than that of previously reported approaches.
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Affiliation(s)
- Subbarao Yalamanchili
- Department of Chemistry , Tufts University , 62 Talbot Avenue , Medford , Massachusetts 02155 , United States
| | - Dina Lloyd
- Department of Chemistry , Tufts University , 62 Talbot Avenue , Medford , Massachusetts 02155 , United States
| | - Clay S Bennett
- Department of Chemistry , Tufts University , 62 Talbot Avenue , Medford , Massachusetts 02155 , United States
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36
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Yu F, Li J, DeMent PM, Tu YJ, Schlegel HB, Nguyen HM. Phenanthroline-Catalyzed Stereoretentive Glycosylations. Angew Chem Int Ed Engl 2019; 58:6957-6961. [PMID: 30920099 DOI: 10.1002/anie.201901346] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 03/07/2019] [Indexed: 11/08/2022]
Abstract
Carbohydrates are essential moieties of many bioactive molecules in nature. However, efforts to elucidate their modes of action are often impeded by limitations in synthetic access to well-defined oligosaccharides. Most of the current methods rely on the design of specialized coupling partners to control selectivity during the formation of glycosidic bonds. Reported herein is the use of a commercially available phenanthroline to catalyze stereoretentive glycosylation with glycosyl bromides. The method provides efficient access to α-1,2-cis glycosides. This protocol has been performed for the large-scale synthesis of an octasaccharide adjuvant. Density-functional theory calculations, together with kinetic studies, suggest that the reaction proceeds by a double SN 2 mechanism.
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Affiliation(s)
- Fei Yu
- Department of Chemistry, Wayne State University, Detroit, MI 48202, USA
| | - Jiayi Li
- Department of Chemistry, Wayne State University, Detroit, MI 48202, USA
| | - Paul M DeMent
- Department of Chemistry, Wayne State University, Detroit, MI 48202, USA
| | - Yi-Jung Tu
- Department of Chemistry, Wayne State University, Detroit, MI 48202, USA
| | | | - Hien M Nguyen
- Department of Chemistry, Wayne State University, Detroit, MI 48202, USA
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37
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Yu F, Li J, DeMent PM, Tu Y, Schlegel HB, Nguyen HM. Phenanthroline‐Catalyzed Stereoretentive Glycosylations. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201901346] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Fei Yu
- Department of ChemistryWayne State University Detroit MI 48202 USA
| | - Jiayi Li
- Department of ChemistryWayne State University Detroit MI 48202 USA
| | - Paul M. DeMent
- Department of ChemistryWayne State University Detroit MI 48202 USA
| | - Yi‐Jung Tu
- Department of ChemistryWayne State University Detroit MI 48202 USA
| | | | - Hien M. Nguyen
- Department of ChemistryWayne State University Detroit MI 48202 USA
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38
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Abstract
The translation of biological glycosylation in humans to the clinical applications involves systematic studies using homogeneous samples of oligosaccharides and glycoconjugates, which could be accessed by chemical, enzymatic or other biological methods. However, the structural complexity and wide-range variations of glycans and their conjugates represent a major challenge in the synthesis of this class of biomolecules. To help navigate within many methods of oligosaccharide synthesis, this Perspective offers a critical assessment of the most promising synthetic strategies with an eye on the therapeutically relevant targets.
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Affiliation(s)
- Larissa Krasnova
- Department of Chemistry , The Scripps Research Institute , 10550 N. Torrey Pines Road , La Jolla , California 92037 , United States
| | - Chi-Huey Wong
- Department of Chemistry , The Scripps Research Institute , 10550 N. Torrey Pines Road , La Jolla , California 92037 , United States.,Genomics Research Center, Academia Sinica , Taipei 115 , Taiwan
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39
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Zhang Y, Zhou S, Wang X, Zhang H, Guo Z, Gao J. A new method for α-specific glucosylation and its application to the one-pot synthesis of a branched α-glucan. Org Chem Front 2019. [DOI: 10.1039/c8qo01177j] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
We have developed a new and highly efficient α-specific glucosylation method based on the synergistic α-directing effects of a TolSCl/AgOTf promoter system and the steric β-shielding or the remote participation of protecting groups at the donor 6-O-position.
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Affiliation(s)
- Yanxin Zhang
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Shihao Zhou
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Xiaohan Wang
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Han Zhang
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Zhongwu Guo
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Jian Gao
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
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40
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Mannino MP, Yasomanee JP, Demchenko AV. Investigation of the H-bond-mediated aglycone delivery reaction in application to the synthesis of β-glucosides. Carbohydr Res 2018; 470:1-7. [PMID: 30286335 PMCID: PMC6215728 DOI: 10.1016/j.carres.2018.09.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2018] [Revised: 09/10/2018] [Accepted: 09/10/2018] [Indexed: 01/16/2023]
Abstract
In an attempt to refine the H-bond-mediated Aglycone Delivery (HAD) glycosylation reaction reported herein is the synthesis of β-glucosides using an ethylthio glucoside donor equipped with the remote 6-O-picoloyl substituent. Upon examining various aliphatic, aromatic, and carbohydrate acceptors, it was determined that both electronic and steric factors may greatly affect the stereoselectivity of the HAD reaction with this donor.
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Affiliation(s)
- Michael P. Mannino
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis One University Boulevard, St. Louis, MO 63121, USA Fax: (+) 1-314-516-5342;
| | - Jagodige P. Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis One University Boulevard, St. Louis, MO 63121, USA Fax: (+) 1-314-516-5342;
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis One University Boulevard, St. Louis, MO 63121, USA Fax: (+) 1-314-516-5342;
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41
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Panza M, Pistorio SG, Stine KJ, Demchenko AV. Automated Chemical Oligosaccharide Synthesis: Novel Approach to Traditional Challenges. Chem Rev 2018; 118:8105-8150. [PMID: 29953217 PMCID: PMC6522228 DOI: 10.1021/acs.chemrev.8b00051] [Citation(s) in RCA: 216] [Impact Index Per Article: 36.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Advances in carbohydrate chemistry have certainly made common oligosaccharides much more accessible. However, many current methods still rely heavily upon specialized knowledge of carbohydrate chemistry. The application of automated technologies to chemical and life science applications such as genomics and proteomics represents a vibrant field. These automated technologies also present opportunities for their application to organic synthesis, including that of the synthesis of oligosaccharides. However, application of automated methods to the synthesis of carbohydrates is an underdeveloped area as compared to other classes of biomolecules. The overarching goal of this review article is to present the advances that have been made at the interface of carbohydrate chemistry and automated technology.
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Affiliation(s)
- Matteo Panza
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Salvatore G. Pistorio
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Keith J. Stine
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
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42
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Abstract
Deoxy-sugars often play a critical role in modulating the potency of many bioactive natural products. Accordingly, there has been sustained interest in methods for their synthesis over the past several decades. The focus of much of this work has been on developing new glycosylation reactions that permit the mild and selective construction of deoxyglycosides. This Review covers classical approaches to deoxyglycoside synthesis, as well as more recently developed chemistry that aims to control the selectivity of the reaction through rational design of the promoter. Where relevant, the application of this chemistry to natural product synthesis will also be described.
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Affiliation(s)
- Clay S. Bennett
- Department
of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - M. Carmen Galan
- School
of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
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43
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Adero PO, Amarasekara H, Wen P, Bohé L, Crich D. The Experimental Evidence in Support of Glycosylation Mechanisms at the S N1-S N2 Interface. Chem Rev 2018; 118:8242-8284. [PMID: 29846062 PMCID: PMC6135681 DOI: 10.1021/acs.chemrev.8b00083] [Citation(s) in RCA: 219] [Impact Index Per Article: 36.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A critical review of the state-of-the-art evidence in support of the mechanisms of glycosylation reactions is provided. Factors affecting the stability of putative oxocarbenium ions as intermediates at the SN1 end of the mechanistic continuum are first surveyed before the evidence, spectroscopic and indirect, for the existence of such species on the time scale of glycosylation reactions is presented. Current models for diastereoselectivity in nucleophilic attack on oxocarbenium ions are then described. Evidence in support of the intermediacy of activated covalent glycosyl donors is reviewed, before the influences of the structure of the nucleophile, of the solvent, of temperature, and of donor-acceptor hydrogen bonding on the mechanism of glycosylation reactions are surveyed. Studies on the kinetics of glycosylation reactions and the use of kinetic isotope effects for the determination of transition-state structure are presented, before computational models are finally surveyed. The review concludes with a critical appraisal of the state of the art.
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Affiliation(s)
- Philip Ouma Adero
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
| | - Harsha Amarasekara
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
| | - Peng Wen
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
| | - Luis Bohé
- Institut de Chimie des Substances Naturelles, CNRS UPR 2301 , Université Paris-Sud Université Paris-Saclay , 1 avenue de la Terrasse , 91198 Gif-sur-Yvette , France
| | - David Crich
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
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44
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Li HZ, Ding J, Cheng CR, Chen Y, Liang XY. β-L-Arabinofuranosylation Conducted by 5-O-(2-pyridinecarbonyl)-L-arabinofuranosyl Trichloroacetimidate. Carbohydr Res 2018; 460:1-7. [PMID: 29476991 DOI: 10.1016/j.carres.2018.02.006] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2018] [Revised: 02/06/2018] [Accepted: 02/07/2018] [Indexed: 11/29/2022]
Abstract
We describe a β-L-arabinofuranosylation method by employing the 5-O-(2-pyridinecarbonyl)-L-arabinofuranosyl trichloroacetimidate 10 as a donor. This approach allows a wide range of acceptor substrates, especially amino acid acceptors, to be used. Stereoselective synthesis of β-(1,4)-L-arabinofuranosyl-(2S, 4R)-4-hydroxy-L-proline (β-L-Araf-L-Hyp4) and its dimer is achieved readily by this method. Both the stereoselectivities and yields of the reactions are excellent. To demonstrate the utility of this methodology, the preparation of a trisaccharide in a one-pot manner was carried out.
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Affiliation(s)
- Hong-Zhan Li
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China
| | - Jie Ding
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China
| | - Chun-Ru Cheng
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China
| | - Yue Chen
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China
| | - Xing-Yong Liang
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China.
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45
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Wang L, Overkleeft HS, van der Marel GA, Codée JDC. Reagent Controlled Stereoselective Synthesis of α-Glucans. J Am Chem Soc 2018; 140:4632-4638. [PMID: 29553729 PMCID: PMC5890317 DOI: 10.1021/jacs.8b00669] [Citation(s) in RCA: 85] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2018] [Indexed: 11/29/2022]
Abstract
The development of a general glycosylation method that allows for the stereoselective construction of glycosidic linkages is a tremendous challenge. Because of the differences in steric and electronic properties of the building blocks used, the outcome of a glycosylation reaction can vary greatly when switching form one glycosyl donor-acceptor pair to another. We here report a strategy to install cis-glucosidic linkages in a fully stereoselective fashion that is under direct control of the reagents used to activate a single type of donor building block. The activating reagents are tuned to the intrinsic reactivity of the acceptor alcohol to match the reactivity of the glycosylating agent with the reactivity of the incoming nucleophile. A protecting group strategy is introduced that is based on the sole use of benzyl-ether type protecting groups to circumvent changes in reactivity as a result of the protecting groups. For the stereoselective construction of the α-glucosyl linkages to a secondary alcohol, a per-benzylated glusosyl imidate donor is activated with a combination of trimethylsilyltriflate and DMF, while activation of the same imidate donor with trimethylsilyl iodide in the presence of triphenylphosphine oxide allows for the stereoselective cis-glucosylation of primary alcohols. The effectiveness of the strategy is illustrated in the modular synthesis of a Mycobacterium tuberculosis nonasaccharide, composed of an α-(1-4)-oligoglucose backbone bearing different α-glucosyl branches.
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Affiliation(s)
- Liming Wang
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands
| | - Herman S. Overkleeft
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands
| | | | - Jeroen D. C. Codée
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands
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46
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Yang DM, Chen Y, Sweeney RP, Lowary TL, Liang XY. Stereocontrolled Synthesis of 2-Deoxy-galactopyranosides via Isopropylidene-Protected 6-O-Silylated Donors. Org Lett 2018; 20:2287-2290. [DOI: 10.1021/acs.orglett.8b00632] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Dan-Mei Yang
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China
| | - Yue Chen
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China
| | - Ryan P. Sweeney
- Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Edmonton, AB T6G 2G2, Canada
| | - Todd L. Lowary
- Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Edmonton, AB T6G 2G2, Canada
| | - Xing-Yong Liang
- School of Chemistry Engineering, Sichuan University of Science & Engineering, Zigong 643000, China
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47
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Tanaka M, Nakagawa A, Nishi N, Iijima K, Sawa R, Takahashi D, Toshima K. Boronic-Acid-Catalyzed Regioselective and 1,2- cis-Stereoselective Glycosylation of Unprotected Sugar Acceptors via S Ni-Type Mechanism. J Am Chem Soc 2018; 140:3644-3651. [PMID: 29457892 DOI: 10.1021/jacs.7b12108] [Citation(s) in RCA: 79] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Regio- and 1,2- cis-stereoselective chemical glycosylation of unprotected glycosyl acceptors has been in great demand for the efficient synthesis of natural glycosides. However, simultaneously regulating these selectivities has been a longstanding problem in synthetic organic chemistry. In nature, glycosyl transferases catalyze regioselective 1,2- cis-glycosylations via the SNi mechanism, yet no useful chemical glycosylations based on this mechanism have been developed. In this paper, we report a highly regio- and 1,2- cis-stereoselective SNi-type glycosylation of 1,2-anhydro donors and unprotected sugar acceptors using p-nitrophenylboronic acid (10e) as a catalyst in the presence of water under mild conditions. Highly controlled regio- and 1,2- cis-stereoselectivities were achieved via the combination of boron-mediated carbohydrate recognition and the SNi-type mechanism. Mechanistic studies using the KIEs and DFT calculations were consistent with a highly dissociative concerted SNi mechanism. This glycosylation method was applied successfully to the direct glycosylation of unprotected natural glycosides and the efficient synthesis of a complex oligosaccharide with minimal protecting groups.
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Affiliation(s)
- Masamichi Tanaka
- Department of Applied Chemistry, Faculty of Science and Technology , Keio University , 3-14-1 Hiyoshi , Kohoku-ku, Yokohama 223-8522 , Japan
| | - Akira Nakagawa
- Department of Applied Chemistry, Faculty of Science and Technology , Keio University , 3-14-1 Hiyoshi , Kohoku-ku, Yokohama 223-8522 , Japan
| | - Nobuya Nishi
- Department of Applied Chemistry, Faculty of Science and Technology , Keio University , 3-14-1 Hiyoshi , Kohoku-ku, Yokohama 223-8522 , Japan
| | - Kiyoko Iijima
- Institute of Microbial Chemistry (BIKAKEN) , 3-14-23 Kamiosaki , Shinagawa-ku, Tokyo 141-0021 , Japan
| | - Ryuichi Sawa
- Institute of Microbial Chemistry (BIKAKEN) , 3-14-23 Kamiosaki , Shinagawa-ku, Tokyo 141-0021 , Japan
| | - Daisuke Takahashi
- Department of Applied Chemistry, Faculty of Science and Technology , Keio University , 3-14-1 Hiyoshi , Kohoku-ku, Yokohama 223-8522 , Japan
| | - Kazunobu Toshima
- Department of Applied Chemistry, Faculty of Science and Technology , Keio University , 3-14-1 Hiyoshi , Kohoku-ku, Yokohama 223-8522 , Japan
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Huang W, Zhou YY, Pan XL, Zhou XY, Lei JC, Liu DM, Chu Y, Yang JS. Stereodirecting Effect of C5-Carboxylate Substituents on the Glycosylation Stereochemistry of 3-Deoxy-d-manno-oct-2-ulosonic Acid (Kdo) Thioglycoside Donors: Stereoselective Synthesis of α- and β-Kdo Glycosides. J Am Chem Soc 2018; 140:3574-3582. [PMID: 29481074 DOI: 10.1021/jacs.7b09461] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Wei Huang
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
| | - Ying-Yu Zhou
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
| | - Xing-Ling Pan
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
| | - Xian-Yang Zhou
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
| | - Jin-Cai Lei
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
| | - Dong-Mei Liu
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
| | - Yue Chu
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
| | - Jin-Song Yang
- Department of Chemistry of Medicinal Natural Products, Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu 610041, China
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Abstract
Investigations of methodologies aimed on improving the stereoselective synthesis of sialosides and the efficient assembly of sialic acid glycoconjugates has been the mission of dedicated research groups from the late 1960s. This review presents major accomplishments in the field, with the emphasis on significant breakthroughs and influential synthetic strategies of the last decade.
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Abstract
Carbohydrate oligomers remain challenging targets for chemists due to the requirement for elaborate protecting and leaving group manipulations, functionalization, tedious purification, and sophisticated characterization. Achieving high stereocontrol in glycosylation reactions is arguably the major hurdle that chemists experience. This review article overviews methods for intramolecular glycosylation reactions wherein the facial stereoselectivity is achieved by tethering of the glycosyl donor and acceptor counterparts.
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Affiliation(s)
- Xiao G Jia
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Blvd., 434 Benton Hall (MC27), St. Louis, MO 63121, USA
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Blvd., 434 Benton Hall (MC27), St. Louis, MO 63121, USA
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