1
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Zhou Q, Dong X, Chi G, Cao XY, Zhang N, Wu S, Ma Y, Zhang ZH, Zhang L. Cinquefoil Knot Possessing Dynamic and Tunable Metal Coordination. J Am Chem Soc 2024. [PMID: 39099103 DOI: 10.1021/jacs.4c05376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/06/2024]
Abstract
While the majority of knots are made from the metal-template approach, the use of entangled, constrained knotted loops to modulate the coordination of the metal ions remains inadequately elucidated. Here, we report on the coordination chemistry of a 140-atom-long cinquefoil knotted strand comprising five tridentate and five bidentate chelating vacancies. The knotted loop is prepared through the self-assembly of asymmetric "3 + 2" dentate ligands with copper(II) ions that favor five-coordination geometry. The formation of the copper(II) pentameric helicate is confirmed by X-ray crystallography, while the corresponding copper(II) knot is characterized by XPS and LR-/HR ESI-MS. Upon removal of the original template, the knotted ligand facilitates zinc(II) ions, which typically form four- or six-coordination geometries, resulting in the formation of an otherwise inaccessible zinc(II) metallic knot with coordinatively unsaturated metal centers. The coordination numbers and geometries of the zinc(II) cations are undoubtedly determined by X-ray crystallography. Despite the kinetically labile nature and high reversibility of the zinc(II) complex preventing the detection of 5-to-6 coordination equilibrium in solution, the effects on metal-ion coordination induced by knotting hold promise for fine-tuning the coordination of metal complexes.
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Affiliation(s)
- Qi Zhou
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
| | - Xue Dong
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM) and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China
| | - Guanyu Chi
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
| | - Xiao-Yu Cao
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM) and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China
| | - Ningjin Zhang
- Instrumental Analytical Center of Shanghai Jiao Tong University, Shanghai 201100, P. R. China
| | - Shitao Wu
- School of Physical Science and Technology and Shanghai Key Laboratory of High-Resolution Electron Microscopy, ShanghaiTech University, Shanghai 201210, P. R. China
| | - Yanhang Ma
- School of Physical Science and Technology and Shanghai Key Laboratory of High-Resolution Electron Microscopy, ShanghaiTech University, Shanghai 201210, P. R. China
| | - Zhi-Hui Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
| | - Liang Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
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2
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Kikuchi K, Sei H, Okubo K, Tohnai N, Oka K, Dekura S, Kikuchi T, Imoto H, Naka K. Breathing Metal-Organic Frameworks Supported by an Arsenic-Bridged 4,4'-Bipyridine Ligand. Inorg Chem 2024; 63:4337-4343. [PMID: 38365195 DOI: 10.1021/acs.inorgchem.3c04570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2024]
Abstract
Bent ligands bridged by heteroatoms have drawn significant interest as supramolecular coordination architectures. Traditionally, divalent group 16 elements are preferred over trivalent group 15 elements because of the anticipated steric hindrance. In this study, we explore metal-organic frameworks (MOFs) based on dipyridinoarsoles (DPAs), 4,4'-bipyridines bridged with an arsenic atom. An MOF with methyl-substituted DPA collapsed upon solvent removal, whereas that with phenyl-substituted DPA demonstrated breathing behavior due to guest molecule adsorption/desorption. In contrast, MOFs using the phosphorus analogue dipyridinophosphole exhibit inferior adsorption and lack breathing behavior. This is the first study to investigate the interplay among substituents, bridging elements, and dynamic behavior in MOFs using bent group 15 ligands.
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Affiliation(s)
- Kazuma Kikuchi
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
| | - Hiroi Sei
- Center for Future Innovation (Cfi) and Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Kohei Okubo
- Center for Future Innovation (Cfi) and Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Norimitsu Tohnai
- Center for Future Innovation (Cfi) and Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Kouki Oka
- Center for Future Innovation (Cfi) and Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Shun Dekura
- The Institute for Solid State Physics, The University of Tokyo, 5-1-5 Kash iwanoha, Kashiwa, Chiba 277-8581, Japan
| | - Takashi Kikuchi
- Rigaku Corporation, 3-9-12 Matsubara-cho, Akishima-shi, Tokyo 196-8666, Japan
| | - Hiroaki Imoto
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
- FOREST, JST, Honcho 4-1-8, Kawaguchi, Saitama 332-0012, Japan
| | - Kensuke Naka
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
- Materials Innovation Lab, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
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3
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Zhang YW, Lu Y, Sun LY, Dutschke PD, Gan MM, Zhang L, Hepp A, Han YF, Hahn FE. Unravelling the Roles of Solvophobic Effects and π⋅⋅⋅π Stacking Interactions in the Formation of [2]Catenanes Featuring Di-(N-Heterocyclic Carbene) Building Blocks. Angew Chem Int Ed Engl 2023; 62:e202312323. [PMID: 37819869 DOI: 10.1002/anie.202312323] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 10/11/2023] [Accepted: 10/11/2023] [Indexed: 10/13/2023]
Abstract
A series of [2]catenanes has been prepared from di-NHC building blocks by utilizing solvophobic effects and/or π⋅⋅⋅π stacking interactions. The dinickel naphthobiscarbene complex syn-[1] and the kinked biphenyl-bridged bipyridyl ligand L2 yield the [2]catenane [2-IL](OTf)4 by self-assembly. Solvophobic effects are pivotal for the formation of the interlocked species. Substitution of the biphenyl-linker in L2 for a pyromellitic diimide group gave ligand L3 , which yielded in combination with syn-[1] the [2]catenane [3-IL](OTf)4 . This assembly exhibits enhanced stability in diluted solution, aided by additional π⋅⋅⋅π stacking interactions. The π⋅⋅⋅π stacking was augmented by the introduction of a pyrene bridge between two NHC donors in ligand L4 . Di-NHC precursor H2 -L4 (PF6 )2 reacts with Ag2 O to give the [Ag2 L4 2 ]2 [2]catenane [4-IL](PF6 )4 , which shows strong π⋅⋅⋅π stacking interactions between the pyrene groups. This assembly was readily converted into the [Au2 L4 2 ]2 gold species [5-IL](PF6 )4 , which exhibits exceptional stability based on the strong π⋅⋅⋅π stacking interactions and the enhanced stability of the Au-CNHC bonds.
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Affiliation(s)
- Ya-Wen Zhang
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Ye Lu
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
- College of Chemistry and Materials Science, Shanghai Normal University, 100 Guilin Road, Shanghai, China, 200234
| | - Li-Ying Sun
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Patrick D Dutschke
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
| | - Ming-Ming Gan
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Le Zhang
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Alexander Hepp
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
| | - Ying-Feng Han
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - F Ekkehardt Hahn
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
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4
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Chen X, Chen H, Fraser Stoddart J. The Story of the Little Blue Box: A Tribute to Siegfried Hünig. Angew Chem Int Ed Engl 2023; 62:e202211387. [PMID: 36131604 PMCID: PMC10099103 DOI: 10.1002/anie.202211387] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Indexed: 02/02/2023]
Abstract
The tetracationic cyclophane, cyclobis(paraquat-p-phenylene), also known as the little blue box, constitutes a modular receptor that has facilitated the discovery of many host-guest complexes and mechanically interlocked molecules during the past 35 years. Its versatility in binding small π-donors in its tetracationic state, as well as forming trisradical tricationic complexes with viologen radical cations in its doubly reduced bisradical dicationic state, renders it valuable for the construction of various stimuli-responsive materials. Since the first reports in 1988, the little blue box has been featured in over 500 publications in the literature. All this research activity would not have been possible without the seminal contributions carried out by Siegfried Hünig, who not only pioneered the syntheses of viologen-containing cyclophanes, but also revealed their rich redox chemistry in addition to their ability to undergo intramolecular π-dimerization. This Review describes how his pioneering research led to the design and synthesis of the little blue box, and how this redox-active host evolved into the key component of molecular shuttles, switches, and machines.
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Affiliation(s)
- Xiao‐Yang Chen
- Department of ChemistryNorthwestern University2145 Sheridan RoadEvanstonIllinois 60208USA
| | - Hongliang Chen
- Stoddart Institute of Molecular ScienceDepartment of ChemistryZhejiang UniversityHangzhou310027China
- ZJU-Hangzhou Global Scientific and Technological Innovation CenterHangzhou311215China
| | - J. Fraser Stoddart
- Department of ChemistryNorthwestern University2145 Sheridan RoadEvanstonIllinois 60208USA
- Stoddart Institute of Molecular ScienceDepartment of ChemistryZhejiang UniversityHangzhou310027China
- ZJU-Hangzhou Global Scientific and Technological Innovation CenterHangzhou311215China
- School of ChemistryUniversity of New South WalesSydneyNSW 2052Australia
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5
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Ashbridge Z, Fielden SDP, Leigh DA, Pirvu L, Schaufelberger F, Zhang L. Knotting matters: orderly molecular entanglements. Chem Soc Rev 2022; 51:7779-7809. [PMID: 35979715 PMCID: PMC9486172 DOI: 10.1039/d2cs00323f] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Indexed: 11/29/2022]
Abstract
Entangling strands in a well-ordered manner can produce useful effects, from shoelaces and fishing nets to brown paper packages tied up with strings. At the nanoscale, non-crystalline polymer chains of sufficient length and flexibility randomly form tangled mixtures containing open knots of different sizes, shapes and complexity. However, discrete molecular knots of precise topology can also be obtained by controlling the number, sequence and stereochemistry of strand crossings: orderly molecular entanglements. During the last decade, substantial progress in the nascent field of molecular nanotopology has been made, with general synthetic strategies and new knotting motifs introduced, along with insights into the properties and functions of ordered tangle sequences. Conformational restrictions imparted by knotting can induce allostery, strong and selective anion binding, catalytic activity, lead to effective chiral expression across length scales, binding modes in conformations efficacious for drug delivery, and facilitate mechanical function at the molecular level. As complex molecular topologies become increasingly synthetically accessible they have the potential to play a significant role in molecular and materials design strategies. We highlight particular examples of molecular knots to illustrate why these are a few of our favourite things.
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Affiliation(s)
- Zoe Ashbridge
- Department of Chemistry, The University of Manchester, Manchester, UK
| | | | - David A Leigh
- Department of Chemistry, The University of Manchester, Manchester, UK
- School of Chemistry and Molecular Engineering, East China Normal University, 3663 N Zhongshan Road, Shanghai, China
| | - Lucian Pirvu
- Department of Chemistry, The University of Manchester, Manchester, UK
| | | | - Liang Zhang
- Department of Chemistry, The University of Manchester, Manchester, UK
- School of Chemistry and Molecular Engineering, East China Normal University, 3663 N Zhongshan Road, Shanghai, China
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6
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Ma L, Li Y, Li X, Zhang L, Sun L, Han Y. A Molecular “
A
‐Type” Tangled Metallocube. Angew Chem Int Ed Engl 2022; 61:e202208376. [DOI: 10.1002/anie.202208376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Indexed: 11/06/2022]
Affiliation(s)
- Li‐Li Ma
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Yang Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Xin Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Le Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Li‐Ying Sun
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Ying‐Feng Han
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
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7
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Ma LL, Li Y, Li X, Zhang L, Sun LY, Han YF. A Molecular “A‐Type” Tangled Metallocube. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202208376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Li-Li Ma
- Northwest University College of Chemistry and Materials Science 1 Xuefu Ave., Guodu Education and Hi-Tech Industries Zone, Chang’an District 710127 CHINA
| | - Yang Li
- Northwest University College of Chemistry and Materials Science 1 Xuefu Ave., Guodu Education and Hi-Tech Industries Zone, Chang’an District 710127 CHINA
| | - Xin Li
- Northwest University College of Chemistry and Materials Science 1 Xuefu Ave., Guodu Education and Hi-Tech Industries Zone, Chang’an District 710127 CHINA
| | - Le Zhang
- Northwest University College of Chemistry and Materials Science 1 Xuefu Ave., Guodu Education and Hi-Tech Industries Zone, Chang’an District 710127 CHINA
| | - Li-Ying Sun
- Northwest University College of Chemistry and Materials Science 1 Xuefu Ave., Guodu Education and Hi-Tech Industries Zone, Chang’an District 710127 CHINA
| | - Ying-Feng Han
- Northwest University College of Chemistry and Materials Science 1 Xuefu Ave., Guodu Education and Hi-Tech Industries Zone, Chang’an District 710127 Xi'an CHINA
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8
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Kumar S, Jana A, Bhowmick S, Das N. Topical progress in medicinal applications of self‐assembled organoplatinum complexes using diverse Pt (II)– and N–based tectons. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Saurabh Kumar
- Department of Chemistry Indian Institute of Technology Patna Patna Bihar India
| | - Achintya Jana
- Department of Chemistry Indian Institute of Technology Patna Patna Bihar India
| | - Sourav Bhowmick
- Department of Chemistry Indian Institute of Technology Patna Patna Bihar India
| | - Neeladri Das
- Department of Chemistry Indian Institute of Technology Patna Patna Bihar India
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9
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Liu D, Lin YJ, Jin GX. Guest Encapsulation and Self-Assembly of a Box-like Metalla-Rectangle Featuring Cp*Rh Fragments. J Organomet Chem 2022. [DOI: 10.1016/j.jorganchem.2022.122353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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10
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Liu D, Lu Y, Lin Y, Jin G. Rational Design and Integrative Assembly of Heteromeric Metalla[2]Catenanes Featuring Cp*Ir/Rh Fragments. Chemistry 2022; 28:e202104617. [DOI: 10.1002/chem.202104617] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Indexed: 11/09/2022]
Affiliation(s)
- Dong Liu
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials State Key Laboratory of Molecular Engineering of Polymer Department of Chemistry Fudan University Shanghai 200433 P.R. China
| | - Ye Lu
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials State Key Laboratory of Molecular Engineering of Polymer Department of Chemistry Fudan University Shanghai 200433 P.R. China
| | - Yue‐Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials State Key Laboratory of Molecular Engineering of Polymer Department of Chemistry Fudan University Shanghai 200433 P.R. China
| | - Guo‐Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials State Key Laboratory of Molecular Engineering of Polymer Department of Chemistry Fudan University Shanghai 200433 P.R. China
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11
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Synthetic approaches for BF2-containing adducts of outstanding biological potential. A review. ARAB J CHEM 2022. [DOI: 10.1016/j.arabjc.2021.103528] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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12
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Herasymchuk K, Allain M, MacNeil GA, Carré V, Aubriet F, Leznoff DB, Sallé M, Goeb S, Storr T. Exciton Coupling in Redox-Active Salen based Self-Assembled Metallacycles. Chemistry 2021; 27:16161-16172. [PMID: 34595790 DOI: 10.1002/chem.202102745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Indexed: 11/09/2022]
Abstract
The incorporation of a redox-active nickel salen complex into supramolecular structures was explored via coordination-driven self-assembly with homobimetallic ruthenium complexes (bridged by oxalato or 5,8-dihydroxy-1,4-naphthoquinato ligands). The self-assembly resulted in the formation of a discrete rectangle using the oxalato complex and either a rectangle or a catenane employing the larger naphthoquinonato complex. The formation of the interlocked self-assembly was determined to be solvent and concentration dependent. The electronic structure and stability of the oxidized metallacycles was probed using electrochemical experiments, UV-Vis-NIR absorption, EPR spectroscopy and DFT calculations, confirming ligand radical formation. Exciton coupling of the intense near-infrared (NIR) ligand radical intervalence charge transfer (IVCT) bands provided further confirmation of the geometric and electronic structures in solution.
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Affiliation(s)
| | - Magali Allain
- Univ Angers, CNRS, MOLTECH-ANJOU, 2 bd Lavoisier, 49000, Angers, France) E-mails: E-mails
| | - Gregory A MacNeil
- Department of Chemistry, Simon Fraser University, Burnaby, V5A 1S6, Canada
| | - Vincent Carré
- LCP-A2MC, FR 3624, Université de Lorraine, ICPM, 1 Bd Arago, 57078, Metz Cedex 03, France
| | - Frédéric Aubriet
- LCP-A2MC, FR 3624, Université de Lorraine, ICPM, 1 Bd Arago, 57078, Metz Cedex 03, France
| | - Daniel B Leznoff
- Department of Chemistry, Simon Fraser University, Burnaby, V5A 1S6, Canada
| | - Marc Sallé
- Univ Angers, CNRS, MOLTECH-ANJOU, 2 bd Lavoisier, 49000, Angers, France) E-mails: E-mails
| | - Sébastien Goeb
- Univ Angers, CNRS, MOLTECH-ANJOU, 2 bd Lavoisier, 49000, Angers, France) E-mails: E-mails
| | - Tim Storr
- Department of Chemistry, Simon Fraser University, Burnaby, V5A 1S6, Canada
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13
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Sawada T, Fujita M. Orderly Entangled Nanostructures of Metal–Peptide Strands. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2021. [DOI: 10.1246/bcsj.20210218] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Tomohisa Sawada
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
- Precursory Research for Embryonic Science and Technology (PRESTO), Japan Science and Technology Agency (JST), 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Makoto Fujita
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
- Division of Advanced Molecular Science, Institute for Molecular Science, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan
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14
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Inomata Y, Sawada T, Fujita M. Metal-Peptide Nonafoil Knots and Decafoil Supercoils. J Am Chem Soc 2021; 143:16734-16739. [PMID: 34601872 DOI: 10.1021/jacs.1c08094] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Despite the frequent occurrence of knotted frameworks in protein structures, the latent potential of peptide strands to form entangled structures is rarely discussed in peptide chemistry. Here we report the construction of highly entangled molecular topologies from Ag(I) ions and tripeptide ligands. The efficient entanglement of metal-peptide strands and the wide scope for design of the amino acid side chains in these ligands enabled the construction of metal-peptide 91 torus knots and 1012 torus links. Moreover, steric control of the peptide side chain induced ring opening and twisting of the torus framework, which resulted in an infinite toroidal supercoil nanostructure.
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Affiliation(s)
- Yuuki Inomata
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Tomohisa Sawada
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.,JST PRESTO, https://www.jst.go.jp/kisoken/presto/en/index.html
| | - Makoto Fujita
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.,Division of Advanced Molecular Science, Institute for Molecular Science (IMS), 5-1 Higashiyama, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan
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15
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O'Keeffe M, Treacy MMJ. Piecewise-linear embeddings of knots and links with rotoinversion symmetry. Acta Crystallogr A Found Adv 2021; 77:392-398. [PMID: 34473094 DOI: 10.1107/s2053273321006136] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Accepted: 06/11/2021] [Indexed: 11/10/2022] Open
Abstract
This article describes the simplest members of an infinite family of knots and links that have achiral piecewise-linear embeddings in which linear segments (sticks) meet at corners. The structures described are all corner- and stick-2-transitive - the smallest possible for achiral knots.
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Affiliation(s)
- Michael O'Keeffe
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, USA
| | - Michael M J Treacy
- Department of Physics, Arizona State University, Tempe, Arizona 85287, USA
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16
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Yan MJ, Liu TF, Huang SL, Yang GY. Bis(β-diketone)-based metallacycles with haloalkane-induced fluorescence enhancement. Dalton Trans 2021; 50:8680-8684. [PMID: 34152331 DOI: 10.1039/d1dt01580j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
A series of metallarectangles 1-5 were synthesized by the selective combination of (p-cymene)Ru-corner, bis(β-diketone) arms and bifunctional pyridyl linkers. They exhibited a very rare phenomenon of haloalkane-induced fluorescence enhancement.
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Affiliation(s)
- Ming-Jie Yan
- MOE Key Laboratory of Cluster Science, Beijing Key Laboratory of Photoelectronic/Electrophotonic Conversion Materials, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 100081, China.
| | - Tian-Fu Liu
- MOE Key Laboratory of Cluster Science, Beijing Key Laboratory of Photoelectronic/Electrophotonic Conversion Materials, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 100081, China.
| | - Sheng-Li Huang
- MOE Key Laboratory of Cluster Science, Beijing Key Laboratory of Photoelectronic/Electrophotonic Conversion Materials, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 100081, China.
| | - Guo-Yu Yang
- MOE Key Laboratory of Cluster Science, Beijing Key Laboratory of Photoelectronic/Electrophotonic Conversion Materials, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 100081, China.
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17
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Carpenter JP, McTernan CT, Greenfield JL, Lavendomme R, Ronson TK, Nitschke JR. Controlling the shape and chirality of an eight-crossing molecular knot. Chem 2021. [DOI: 10.1016/j.chempr.2021.03.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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18
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Yan M, Huang S, Yang G. Photoluminescent Metallaprisms with (
p
‐Cymene)Ru‐Corners and Bis(β‐diketone) Pillars. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202100127] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Ming‐Jie Yan
- MOE Key Laboratory of Cluster Science Beijing Key Laboratory of Photoelectronic/Electrophotonic Conversion Materials School of Chemistry and Chemical Engineering Beijing Institute of Technology Beijing 100081 China
| | - Sheng‐Li Huang
- MOE Key Laboratory of Cluster Science Beijing Key Laboratory of Photoelectronic/Electrophotonic Conversion Materials School of Chemistry and Chemical Engineering Beijing Institute of Technology Beijing 100081 China
| | - Guo‐Yu Yang
- MOE Key Laboratory of Cluster Science Beijing Key Laboratory of Photoelectronic/Electrophotonic Conversion Materials School of Chemistry and Chemical Engineering Beijing Institute of Technology Beijing 100081 China
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19
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Leigh DA, Danon JJ, Fielden SDP, Lemonnier JF, Whitehead GFS, Woltering SL. A molecular endless (7 4) knot. Nat Chem 2021; 13:117-122. [PMID: 33318672 DOI: 10.1038/s41557-020-00594-x] [Citation(s) in RCA: 62] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 10/23/2020] [Indexed: 01/30/2023]
Abstract
Current strategies for the synthesis of molecular knots focus on twisting, folding and/or threading molecular building blocks. Here we report that Zn(II) or Fe(II) ions can be used to weave ligand strands to form a woven 3 × 3 molecular grid. We found that the process requires tetrafluoroborate anions to template the assembly of the interwoven grid by binding within the square cavities formed between the metal-coordinated criss-crossed ligands. The strand ends of the grid can subsequently be joined through within-grid alkene metathesis reactions to form a topologically trivial macrocycle (unknot), a doubly interlocked [2]catenane (Solomon link) and a knot with seven crossings in a 258-atom-long closed loop. This 74 knot topology corresponds to that of an endless knot, which is a basic motif of Celtic interlace, the smallest Chinese knot and one of the eight auspicious symbols of Buddhism and Hinduism. The weaving of molecular strands within a discrete layer by anion-template metal-ion coordination opens the way for the synthesis of other molecular knot topologies and to woven polymer materials.
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Affiliation(s)
- David A Leigh
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China. .,Department of Chemistry, University of Manchester, Manchester, UK.
| | - Jonathan J Danon
- Department of Chemistry, University of Manchester, Manchester, UK
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20
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Non‐Covalent Interaction‐Directed Coordination‐Driven Self‐Assembly of Non‐Trivial Supramolecular Topologies. CHEM REC 2021; 21:574-593. [DOI: 10.1002/tcr.202000155] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2020] [Revised: 12/22/2020] [Accepted: 01/11/2021] [Indexed: 11/07/2022]
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21
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Zhang YY, Qiu FY, Shi HT, Yu W. Self-assembly and guest-induced disassembly of triply interlocked [2]catenanes. Chem Commun (Camb) 2021; 57:3010-3013. [DOI: 10.1039/d0cc08052g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two triply interlocked [2]catenanes and one simple metallacage were constructed by tuning the widths of the organometallic dinuclear building blocks, and the interlocked architectures were disassembled by large aromatic molecules.
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Affiliation(s)
- Ying-Ying Zhang
- Center for Advanced Materials Research
- Henan Key Laboratory of Functional Salt Materials
- Zhongyuan University of Technology
- Zhengzhou
- P. R. China
| | - Feng-Yi Qiu
- Analysis and Testing Central Facility
- Engineering Research Institute
- Anhui University of Technology
- Maanshan
- P. R. China
| | - Hua-Tian Shi
- Analysis and Testing Central Facility
- Engineering Research Institute
- Anhui University of Technology
- Maanshan
- P. R. China
| | - Weibin Yu
- Analysis and Testing Central Facility
- Engineering Research Institute
- Anhui University of Technology
- Maanshan
- P. R. China
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22
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Shao YG, He L, Mao QQ, Hong T, Ying XW, Zhang Z, Li S, Stang PJ. Efficient one-pot synthesis of [3]catenanes based on Pt( ii) metallacycles with a flexible building block. Org Chem Front 2021. [DOI: 10.1039/d1qo00910a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Three [3]catenanes were fabricated in high efficiency through the self-assembly of a 90° platinum(ii) receptor, a flexible bis(4,4′-bipyridinium) donor and a crown ether (DB24C8 or DB30C10).
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Affiliation(s)
- Yuan-Guang Shao
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 311121, China
| | - Lang He
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 311121, China
| | - Qian-Qian Mao
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 311121, China
| | - Tao Hong
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 311121, China
| | - Xin-Wen Ying
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 311121, China
| | - Zibin Zhang
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 311121, China
| | - Shijun Li
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 311121, China
| | - Peter J. Stang
- Department of Chemistry, University of Utah, 315 South 1400 East, Room 2020, Salt Lake City, Utah 84112, USA
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23
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Yu W, Qiu FY, Luo ST, Shi HT, Yuan G, Wei X. Coordination assembly and host–guest chemistry of a triply interlocked [2]catenane. Inorg Chem Front 2021. [DOI: 10.1039/d1qi00174d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Triply catenated systems composed of two or more discrete coordination-metal cages through mechanical bonds exhibit excellent host–guest behaviors, which can be potentially applied in drug delivery systems.
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Affiliation(s)
- Weibin Yu
- Analysis and Testing Central Facility
- Institutes of Molecular Engineering and Applied Chemistry
- Anhui University of Technology
- Ma'anshan 243002
- P. R. China
| | - Feng-Yi Qiu
- Analysis and Testing Central Facility
- Institutes of Molecular Engineering and Applied Chemistry
- Anhui University of Technology
- Ma'anshan 243002
- P. R. China
| | - Shi-Ting Luo
- Analysis and Testing Central Facility
- Institutes of Molecular Engineering and Applied Chemistry
- Anhui University of Technology
- Ma'anshan 243002
- P. R. China
| | - Hua-Tian Shi
- Analysis and Testing Central Facility
- Institutes of Molecular Engineering and Applied Chemistry
- Anhui University of Technology
- Ma'anshan 243002
- P. R. China
| | - Guozan Yuan
- Analysis and Testing Central Facility
- Institutes of Molecular Engineering and Applied Chemistry
- Anhui University of Technology
- Ma'anshan 243002
- P. R. China
| | - Xianwen Wei
- Analysis and Testing Central Facility
- Institutes of Molecular Engineering and Applied Chemistry
- Anhui University of Technology
- Ma'anshan 243002
- P. R. China
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24
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Zhang HN, Lin YJ, Jin GX. Selective Construction of Very Large Stacking-Interaction-Induced Molecular 818 Metalla-knots and Borromean Ring Using Curved Dipyridyl Ligands. J Am Chem Soc 2020; 143:1119-1125. [DOI: 10.1021/jacs.0c11925] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Hai-Ning Zhang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
- State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032 P.R. China
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25
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Yang YD, Chen XL, Sessler JL, Gong HY. Emergent Self-Assembly of a Multicomponent Capsule via Iodine Capture. J Am Chem Soc 2020; 143:2315-2324. [PMID: 33356188 DOI: 10.1021/jacs.0c11838] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Described here is a three-component self-assembly system that displays emergent behavior that differs from that of its constituents. The system comprises an all-hydrocarbon octaaryl macrocycle cyclo[8](1,3-(4,6-dimethyl)benzene (D4d-CDMB-8), corannulene (Cora), and I2. No appreciable interaction is seen between any pair of these three-components, either in cyclohexane or under various crystallization conditions. On the other hand, when all three-components are mixed in cyclohexane and allowed to undergo crystallization, a supramolecular iodine-containing capsule, ((D4d-CDMB-8)3⊃(Cora)2)⊃I2, is obtained. This all-hydrocarbon capsule consists of three D4d-CDMB-8 and two Cora subunits and contains a centrally bound I2 molecule as inferred from single-crystal and powder X-ray diffraction studies as well as solid-state 13C NMR and Raman spectroscopy. These analyses were complemented by solution-phase 1H NMR and UV-vis spectroscopic studies. No evidence of I2 escape from the capsule is seen, even at high temperatures (e.g., up to 418 K). The bound I2 is likewise protected from reaction with alkali or standard reductants in aqueous solution (e.g., saturated NaOH(aq) or aqueous Na2S2O3). It was also found that a mixed powder containing D4d-CDMB-8 and Cora in a 3:2 molar ratio could capture saturated I2 vapor or iodine from aqueous sources (e.g., 1.0 mM I2 in NaCl (35 wt %) or I2 + NaI(aq) (1.0 mM each)). The present system displays structural and functional features that go beyond what would be expected on the basis of a simple sum-of-the-components analysis. As such, it illustrates a new approach to creating self-assembled ensembles with emergent features.
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Affiliation(s)
- Yu-Dong Yang
- College of Chemistry, Beijing Normal University, No. 19, XinJieKouWai Street, HaiDian District, Beijing 100875, P. R. China
| | - Xu-Lang Chen
- College of Chemistry, Beijing Normal University, No. 19, XinJieKouWai Street, HaiDian District, Beijing 100875, P. R. China
| | - Jonathan L Sessler
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street, Stop A5300, Austin, Texas 78712-1224, United States
| | - Han-Yuan Gong
- College of Chemistry, Beijing Normal University, No. 19, XinJieKouWai Street, HaiDian District, Beijing 100875, P. R. China
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26
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Song Y, Schaufelberger F, Ashbridge Z, Pirvu L, Vitorica-Yrezabal IJ, Leigh DA. Effects of turn-structure on folding and entanglement in artificial molecular overhand knots. Chem Sci 2020; 12:1826-1833. [PMID: 34163946 PMCID: PMC8179330 DOI: 10.1039/d0sc05897a] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
The length and constitution of spacers linking three 2,6-pyridinedicarboxamide units in a molecular strand influence the tightness of the resulting overhand (open-trefoil) knot that the strand folds into in the presence of lanthanide(iii) ions. The use of β-hairpin forming motifs as linkers enables a metal-coordinated pseudopeptide with a knotted tertiary structure to be generated. The resulting pseudopeptide knot has one of the highest backbone-to-crossing ratios (BCR)—a measure of knot tightness (a high value corresponding to looseness)—for a synthetic molecular knot to date. Preorganization in the crossing-free turn section of the knot affects aromatic stacking interactions close to the crossing region. The metal-coordinated pseudopeptide knot is compared to overhand knots with other linkers of varying tightness and turn preorganization, and the entangled architectures characterized by NMR spectroscopy, ESI-MS, CD spectroscopy and, in one case, X-ray crystallography. The results show how it is possible to program specific conformational properties into different key regions of synthetic molecular knots, opening the way to systems where knotting can be systematically incorporated into peptide-like chains through design. Spacers linking 2,6-pyridinedicarboxamide units influence the tightness of the corresponding lanthanide-coordinated overhand knot. β-Hairpin forming motifs generate a metal-coordinated pseudopeptide with a knotted tertiary structure.![]()
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Affiliation(s)
- Yiwei Song
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University Shanghai 200062 PR China
| | | | - Zoe Ashbridge
- Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
| | - Lucian Pirvu
- Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
| | | | - David A Leigh
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University Shanghai 200062 PR China .,Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
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27
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28
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Chen XY, Shen D, Cai K, Jiao Y, Wu H, Song B, Zhang L, Tan Y, Wang Y, Feng Y, Stern CL, Stoddart JF. Suit[3]ane. J Am Chem Soc 2020; 142:20152-20160. [PMID: 33180476 DOI: 10.1021/jacs.0c09896] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Suitanes are a class of mechanically interlocked molecules (MIMs) that consist of two components: a body with limbs protruding outward and a suit that fits appropriately around it, so that there is no easy way for the suit to be removed from the body. Herein, we report the synthesis and characterization of a suit[3]ane, which contains a benzotrithiophene derivative (THBTT) with three protruding hexyl chains as the body and a 3-fold symmetric, extended pyridinium-based cage, namely, HexaCage6+, as the suit. Central to its realization is effective templation, provided by THBTT during cage formation, an observation that has been supported by the strong binding constant between benzotrithiophene (BTT) and the empty cage. The solid-state structure of the suit[3]ane reveals that the body is confined within the suit's cavity with its alkyl chains protruding outward through the orifices in the cage. Notably, such a seemingly unstable molecule, having three flexible alkyl chains as its only protruding limbs, does not dissociate after prolonged heating in CD3CN at 100 °C under pressure for 7 days. No evidence for guest exchange with the host was observed at this temperature in a 2:1 mixture of THBTT and HexaCage6+ in CD3CN. The results indicate that flexible protruding limbs are sufficient for a suit[3]ane to remain mechanically stable even at high temperatures in solution.
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Affiliation(s)
- Xiao-Yang Chen
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Dengke Shen
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,Institutes of Physical Science and Information Technology, Anhui University, Hefei 230601, China
| | - Kang Cai
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yang Jiao
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Huang Wu
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Bo Song
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Long Zhang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yu Tan
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yu Wang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yuanning Feng
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Charlotte L Stern
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - J Fraser Stoddart
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,School of Chemistry, University of New South Wales, Sydney, New South Wales 2052, Australia
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29
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Therrien B. Unmasking Arene Ruthenium Building Blocks. CHEM REC 2020; 21:460-468. [PMID: 33215871 DOI: 10.1002/tcr.202000128] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Revised: 10/30/2020] [Accepted: 10/30/2020] [Indexed: 11/11/2022]
Abstract
We have, like many others, contributed to the development and to the popularity of arene ruthenium assemblies. From early on, our research was driven by applications, mainly biological (therapeutic, drug delivery, DNA interactions, photodynamic therapy, imaging). For nearly 15 years, we have focused on the use of arene ruthenium building block as a tool to construct added-value objects. In this account, we want to give the basic reasons behind our choice, and uncover our most successful examples, with an emphasis on the foreseen applications.
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Affiliation(s)
- Bruno Therrien
- Institute of Chemistry, University of Neuchatel, Avenue de Bellevaux 51, CH 2000, Neuchatel, Switzerland
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30
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Margolis EA, Keyes RJ, Lockey SD, Fenlon EE. Design and synthesis of a bis-macrocyclic host and guests as building blocks for small molecular knots. Beilstein J Org Chem 2020; 16:2314-2321. [PMID: 33014171 PMCID: PMC7509378 DOI: 10.3762/bjoc.16.192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2019] [Accepted: 09/02/2020] [Indexed: 11/23/2022] Open
Abstract
The thread–link–cut (TLC) approach has previously shown promise as a novel method to synthesize molecular knots. The modular second-generation approach to small trefoil knots described herein involves electrostatic interactions between an electron-rich bis-macrocyclic host compound and electron-deficient guests in the threading step. The bis-macrocyclic host was synthesized in eight steps and 6.6% overall yield. Ammonium and pyridinium guests were synthesized in 4–5 steps. The TLC knot-forming sequence was carried out and produced a product with the expected molecular weight, but, unfortunately, further characterization did not produce conclusive results regarding the topology of the product.
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Affiliation(s)
- Elizabeth A Margolis
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
| | - Rebecca J Keyes
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
| | - Stephen D Lockey
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
| | - Edward E Fenlon
- Department of Chemistry, Franklin & Marshall College, PO Box 3003, Lancaster, PA 17601, USA
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31
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Li WJ, Hu Z, Xu L, Wang XQ, Wang W, Yin GQ, Zhang DY, Sun Z, Li X, Sun H, Yang HB. Rotaxane-Branched Dendrimers with Enhanced Photosensitization. J Am Chem Soc 2020; 142:16748-16756. [PMID: 32869633 DOI: 10.1021/jacs.0c07292] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
During the past few decades, fabrication of functional rotaxane-branched dendrimers has become one of the most attractive yet challenging topics within supramolecular chemistry and materials science. Herein, we present the successful fabrication of a family of new rotaxane-branched dendrimers containing up to 21 platinum atoms and 42 photosensitizer moieties through an efficient and controllable divergent approach. Notably, the photosensitization efficiencies of these rotaxane-branched dendrimers gradually increased with the increase of dendrimer generation. For example, third-generation rotaxane-branched dendrimer PG3 revealed 13.3-fold higher 1O2 generation efficiency than its corresponding monomer AN. The enhanced 1O2 generation efficiency was attributed to the enhancement of intersystem crossing (ISC) through the simple and efficient incorporation of multiple heavy atoms and photosensitizer moieties on the axles and wheels of the rotaxane units, respectively, which has been validated by UV-visible and fluorescence techniques, time-dependent density functional theory calculations, photolysis model reactions, and apparent activation energy calculations. Therefore, we develop a new promising platform of rotaxane-branched dendrimers for the preparation of effective photosensitizers.
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Affiliation(s)
- Wei-Jian Li
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes & Chang-Kung Chuang Institute, School of Chemistry and Molecular Engineering, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, P.R. China
| | - Zhubin Hu
- State Key Laboratory of Precision Spectroscopy, School of Physics and Electronic Science, East China Normal University, 500 Dongchuan Road, Shanghai 200241, P.R. China
| | - Lin Xu
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes & Chang-Kung Chuang Institute, School of Chemistry and Molecular Engineering, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, P.R. China
| | - Xu-Qing Wang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes & Chang-Kung Chuang Institute, School of Chemistry and Molecular Engineering, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, P.R. China
| | - Wei Wang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes & Chang-Kung Chuang Institute, School of Chemistry and Molecular Engineering, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, P.R. China
| | - Guang-Qiang Yin
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes & Chang-Kung Chuang Institute, School of Chemistry and Molecular Engineering, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, P.R. China.,College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, 518055, P.R. China
| | - Dan-Yang Zhang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes & Chang-Kung Chuang Institute, School of Chemistry and Molecular Engineering, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, P.R. China
| | - Zhenrong Sun
- State Key Laboratory of Precision Spectroscopy, School of Physics and Electronic Science, East China Normal University, 500 Dongchuan Road, Shanghai 200241, P.R. China
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, 518055, P.R. China
| | - Haitao Sun
- State Key Laboratory of Precision Spectroscopy, School of Physics and Electronic Science, East China Normal University, 500 Dongchuan Road, Shanghai 200241, P.R. China
| | - Hai-Bo Yang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes & Chang-Kung Chuang Institute, School of Chemistry and Molecular Engineering, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, P.R. China
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32
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O'Keeffe M, Treacy MMJ. Isogonal weavings on the sphere: knots, links, polycatenanes. Acta Crystallogr A Found Adv 2020; 76:611-621. [PMID: 32869759 DOI: 10.1107/s2053273320010669] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2020] [Accepted: 08/03/2020] [Indexed: 12/20/2022] Open
Abstract
Mathematical knots and links are described as piecewise linear - straight, non-intersecting sticks meeting at corners. Isogonal structures have all corners related by symmetry (`vertex'-transitive). Corner- and stick-transitive structures are termed regular. No regular knots are found. Regular links are cubic or icosahedral and a complete account of these (36 in number) is given, including optimal (thickest-stick) embeddings. Stick 2-transitive isogonal structures are again cubic and icosahedral and also encompass the infinite family of torus knots and links. The major types of these structures are identified and reported with optimal embeddings. The relevance of this work to materials chemistry and biochemistry is noted.
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Affiliation(s)
- Michael O'Keeffe
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, USA
| | - Michael M J Treacy
- Department of Physics, Arizona State University, Tempe, Arizona 85287, USA
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33
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Feng T, Li X, An Y, Bai S, Sun L, Li Y, Wang Y, Han Y. Backbone‐Directed Self‐Assembly of Interlocked Molecular Cyclic Metalla[3]Catenanes. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202004112] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Ting Feng
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Xin Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Yuan‐Yuan An
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Sha Bai
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Li‐Ying Sun
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Yang Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Yao‐Yu Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Ying‐Feng Han
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
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34
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Feng T, Li X, An Y, Bai S, Sun L, Li Y, Wang Y, Han Y. Backbone‐Directed Self‐Assembly of Interlocked Molecular Cyclic Metalla[3]Catenanes. Angew Chem Int Ed Engl 2020; 59:13516-13520. [DOI: 10.1002/anie.202004112] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 04/20/2020] [Indexed: 12/16/2022]
Affiliation(s)
- Ting Feng
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Xin Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Yuan‐Yuan An
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Sha Bai
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Li‐Ying Sun
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Yang Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Yao‐Yu Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
| | - Ying‐Feng Han
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710127 P. R. China
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35
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Singh J, Kim DH, Kim EH, Kim H, Hadiputra R, Jung J, Chi KW. The First Quantitative Synthesis of a Closed Three-Link Chain (613) Using Coordination and Noncovalent Interactions-Driven Self-Assembly. J Am Chem Soc 2020; 142:9327-9336. [DOI: 10.1021/jacs.0c01406] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Jatinder Singh
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
- Energy Materials Laboratory, Korea Institute of Energy Research, Daejeon 34129, Republic of Korea
| | - Dong Hwan Kim
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Eun-Hee Kim
- Center for Research Equipments, Korea Basic Science Institute, Ochang, Chungbuk 28119, Republic of Korea
| | - Hyunuk Kim
- Energy Materials Laboratory, Korea Institute of Energy Research, Daejeon 34129, Republic of Korea
| | - Rizky Hadiputra
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Jaehoon Jung
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Ki-Whan Chi
- Department of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
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36
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Gao X, Guo BB, Dang LL, Jin GX. A template-free strategy for the synthesis of highly stable trefoil knots. J Organomet Chem 2020. [DOI: 10.1016/j.jorganchem.2020.121172] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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37
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Shan W, Gao X, Lin Y, Jin G. Template‐Free Self‐Assembly of Molecular Trefoil Knots and Double Trefoil Knots Featuring Cp*Rh Building Blocks. Chemistry 2020; 26:5093-5099. [DOI: 10.1002/chem.202000525] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Revised: 02/15/2020] [Indexed: 11/10/2022]
Affiliation(s)
- Wei‐Long Shan
- State Key Laboratory of Molecular Engineering of PolymersShanghai Key Laboratory of Molecular Catalysis and Innovative MaterialsDepartment of ChemistryFudan University 220 Handan Road Shanghai 200433 P. R. China
- School of Chemistry and Chemical EngineeringAnhui University of Technology Maanshan 243002 P. R. China
| | - Xiang Gao
- State Key Laboratory of Molecular Engineering of PolymersShanghai Key Laboratory of Molecular Catalysis and Innovative MaterialsDepartment of ChemistryFudan University 220 Handan Road Shanghai 200433 P. R. China
| | - Yue‐Jian Lin
- State Key Laboratory of Molecular Engineering of PolymersShanghai Key Laboratory of Molecular Catalysis and Innovative MaterialsDepartment of ChemistryFudan University 220 Handan Road Shanghai 200433 P. R. China
| | - Guo‐Xin Jin
- State Key Laboratory of Molecular Engineering of PolymersShanghai Key Laboratory of Molecular Catalysis and Innovative MaterialsDepartment of ChemistryFudan University 220 Handan Road Shanghai 200433 P. R. China
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38
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Hu YX, Hao X, Xu L, Xie X, Xiong B, Hu Z, Sun H, Yin GQ, Li X, Peng H, Yang HB. Construction of Supramolecular Liquid-Crystalline Metallacycles for Holographic Storage of Colored Images. J Am Chem Soc 2020; 142:6285-6294. [PMID: 32160466 DOI: 10.1021/jacs.0c00698] [Citation(s) in RCA: 64] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Design and construction of new functionalized supramolecular coordination complexes (SCCs) via coordination-driven self-assembly strategy is highly important in supramolecular chemistry and materials science. Herein, we present a family of well-defined metallacycles decorated with mesogenic forklike dendrons through the strategy of coordination-driven self-assembly. Due to the existence of mesogenic forklike dendrons, the obtained metallacycles displayed the smectic A liquid crystal phase at room temperature while their precursors exhibited the rectangular columnar liquid crystal phase. Interestingly, by taking advantage of the electrostatic interactions between the positively charged metallacycle and the negatively charged heparin, the doping of heparin induced a significant change of the liquid-crystalline behaviors of metallacycles. More importantly, the prepared liquid-crystalline metallacycles could be further applied for holographic storage of colored images. Notably, the rhomboidal metallacycle and hexagonal metallacycle gave rise to different holographic performances although they featured a similar liquid crystal phase behavior. Therefore, this research not only provides the first successful example of supramolecular liquid-crystalline metallacycles for holographic storage of colored images but also opens a new door for supramolecular liquid-crystalline metallacycles toward advanced optical applications.
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Affiliation(s)
| | - Xingtian Hao
- State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology, Wuhan 430074, P. R. China
| | | | - Xiaolin Xie
- State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology, Wuhan 430074, P. R. China
| | - Bijin Xiong
- State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology, Wuhan 430074, P. R. China
| | | | | | - Guang-Qiang Yin
- Department of Chemistry, University of South Florida, Tampa, Florida 33620, United States
| | - Xiaopeng Li
- Department of Chemistry, University of South Florida, Tampa, Florida 33620, United States
| | - Haiyan Peng
- State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology, Wuhan 430074, P. R. China
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39
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Caprice K, Aster A, Cougnon FBL, Kumpulainen T. Untying the Photophysics of Quinolinium-Based Molecular Knots and Links. Chemistry 2020; 26:1576-1587. [PMID: 31670851 DOI: 10.1002/chem.201904456] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2019] [Revised: 10/30/2019] [Indexed: 01/08/2023]
Abstract
Complex molecular knots and links are still difficult to synthesize and the properties arising from their topology are mostly unknown. Here, we report on a comparative photophysical study carried out on a family of closely related quinolinium-based knots and links to determine the impact exerted by topology on the molecular backbone. Our results indicate that topology has a negligible influence on the behavior of loosely braided molecules, which mostly behave like their unbraided equivalents. On the other hand, tightly braided molecules display distinct features. Their higher packing density results in a pronounced ability to resist deformation, a significant reduction in the solvent-accessible surface area and favors close-range π-π interactions between the quinolinium units and neighboring aromatics. Finally, the sharp alteration in behavior between loosely and tightly braided molecules sheds light on the factors contributing to braiding tightness.
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Affiliation(s)
- Kenji Caprice
- Department of Organic Chemistry, University of Geneva, 30 Quai Ernest Ansermet, Geneva, Switzerland
| | - Alexander Aster
- Department of Physical Chemistry, University of Geneva, 30 Quai Ernest Ansermet, Geneva, Switzerland
| | - Fabien B L Cougnon
- Department of Organic Chemistry, University of Geneva, 30 Quai Ernest Ansermet, Geneva, Switzerland
| | - Tatu Kumpulainen
- Department of Physical Chemistry, University of Geneva, 30 Quai Ernest Ansermet, Geneva, Switzerland
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40
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Groß C, Sun Y, Jost T, Grimm T, Klein MP, Niedner-Schatteburg G, Becker S, Thiel WR. Generation of a zinc and rhodium containing metallomacrocycle by rearrangement of a six-coordinate precursor complex. Chem Commun (Camb) 2020; 56:368-371. [PMID: 31808780 DOI: 10.1039/c9cc07723e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Two pentadentate N3,P2 ligands coordinate zinc(ii) by their N3 pocket. Four free phosphine donors allow the coordination of four AuCl moieties leading to a pentanuclear ZnAu4 complex. In contrast, the attempt to use the phosphines for chelating coordination of two Rh(CO)Cl units results in a well-organized rearrangement that ends up with the formation of a metallomacrocycle in high yields.
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Affiliation(s)
- C Groß
- Fachbereich Chemie, TU Kaiserslautern, Erwin-Schrödinger-Str. 54, 67663 Kaiserslautern, Germany.
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41
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Celaya CA, Salcedo R, Sansores LE. Molecular knot with nine crossings: Structure and electronic properties from density functional theory computation. J Mol Graph Model 2019; 94:107481. [PMID: 31671365 DOI: 10.1016/j.jmgm.2019.107481] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2019] [Revised: 10/17/2019] [Accepted: 10/17/2019] [Indexed: 11/27/2022]
Abstract
The electronic structure of a molecule with nine-crossing composite knots 973 link denoted by the Alexander-Briggs notation (complex-1) are studied by means of theoretical methods (DFT). The most interesting feature of this kind of molecules is their capability to capture anion spices inside the cage. Stability and chemical reactivity were evaluated taking advantage of the criteria chemical hardness and chemical potential. The simulation of the infrared spectra is also included and shows the characteristic signal of the molecule in a range 1000-1600 cm-1. The frontier molecular orbitals were also analyzed. Whereas the capability to capture chlorine ion into the cavity of the complex-1 is explored by means the analysis of bond energy. Also, the electron density distribution of the chlorine complex was studied by means the quantum theory of atoms in molecules (QTAIM) formalism in order to stablish its bonding properties as well as the electron transfer between chlorine ion and complex-1 which was approached by the natural bonding orbital (NBO) and Hirshfeld charge. Ours results revels semiconductor behaviors for both compounds.
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Affiliation(s)
- Christian A Celaya
- Departamento de Materiales de Baja Dimensionalidad, Instituto de Investigaciones en Materiales, Universidad Nacional Autónoma de México, Circuito Exterior S/n, Ciudad Universitaria, CP 04510, Coyoacán, Ciudad de México, Mexico.
| | - Roberto Salcedo
- Departamento de Materiales de Baja Dimensionalidad, Instituto de Investigaciones en Materiales, Universidad Nacional Autónoma de México, Circuito Exterior S/n, Ciudad Universitaria, CP 04510, Coyoacán, Ciudad de México, Mexico
| | - Luis Enrique Sansores
- Departamento de Materiales de Baja Dimensionalidad, Instituto de Investigaciones en Materiales, Universidad Nacional Autónoma de México, Circuito Exterior S/n, Ciudad Universitaria, CP 04510, Coyoacán, Ciudad de México, Mexico
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42
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Paul I, Ghosh A, Bolte M, Schmittel M. Remote Control of the Synthesis of a [2]Rotaxane and its Shuttling via Metal-Ion Translocation. ChemistryOpen 2019; 8:1355-1360. [PMID: 31763127 PMCID: PMC6863578 DOI: 10.1002/open.201900293] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Revised: 10/30/2019] [Indexed: 12/25/2022] Open
Abstract
Remote control in an eight-component network commanded both the synthesis and shuttling of a [2]rotaxane via metal-ion translocation, the latter being easily monitored by distinct colorimetric and fluorimetric signals. Addition of zinc(II) ions to the red colored copper-ion relay station rapidly liberated copper(I) ions and afforded the corresponding zinc complex that was visualized by a bright sky blue fluorescence at 460 nm. In a mixture of all eight components of the network, the liberated copper(I) ions were translocated to a macrocycle that catalyzed formation of a rotaxane by a double-click reaction of acetylenic and diazide compounds. The shuttling frequency in the copper-loaded [2]rotaxane was determined to k 298=30 kHz (ΔH ≠=62.3±0.6 kJ mol-1, ΔS ≠=50.1±5.1 J mol-1 K-1, ΔG ≠ 298=47.4 kJ mol-1). Removal of zinc(II) ions from the mixture reversed the system back generating the metal-free rotaxane. Further alternate addition and removal of Zn2+ reversibly controlled the shuttling mode of the rotaxane in this eight-component network where the ion translocation status was monitored by the naked eye.
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Affiliation(s)
- Indrajit Paul
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversität SiegenAdolf-Reichwein-Str. 2D-57068SiegenGermany
| | - Amit Ghosh
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversität SiegenAdolf-Reichwein-Str. 2D-57068SiegenGermany
| | - Michael Bolte
- Institut für Anorganische und Analytische ChemieGoethe-Universität FrankfurtMax-von-Laue-Strasse 7D-60438Frankfurt (Main)Germany
| | - Michael Schmittel
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversität SiegenAdolf-Reichwein-Str. 2D-57068SiegenGermany
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43
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Liu D, Lu Y, Lin Y, Jin G. Donor–Acceptor [2]‐ and [3]Catenanes Assembled from Versatile Pre‐Organized Cp*Rh/Ir‐Directed Pseudorotaxane Tectons. Chemistry 2019; 25:14785-14789. [DOI: 10.1002/chem.201904082] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Indexed: 01/09/2023]
Affiliation(s)
- Dong Liu
- State Key Laboratory of Molecular Engineering of PolymersCollaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryFudan University 2005 Songhu Road Shanghai 200438 P. R. China
| | - Ye Lu
- State Key Laboratory of Molecular Engineering of PolymersCollaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryFudan University 2005 Songhu Road Shanghai 200438 P. R. China
| | - Yue‐Jian Lin
- State Key Laboratory of Molecular Engineering of PolymersCollaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryFudan University 2005 Songhu Road Shanghai 200438 P. R. China
| | - Guo‐Xin Jin
- State Key Laboratory of Molecular Engineering of PolymersCollaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryFudan University 2005 Songhu Road Shanghai 200438 P. R. China
- State Key Laboratory of Organometallic ChemistryShanghai Institute of Organic Chemistry, Chinese Academy of Science 345 Lingling Road Shanghai 200032 P. R. China
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44
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Zhang HN, Gao WX, Lin YJ, Jin GX. Reversible Structural Transformation between a Molecular Solomon Link and an Unusual Unsymmetrical Trefoil Knot. J Am Chem Soc 2019; 141:16057-16063. [DOI: 10.1021/jacs.9b08254] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Hai-Ning Zhang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Wen-Xi Gao
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
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45
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Gupta G, You Y, Hadiputra R, Jung J, Kang DK, Lee CY. Heterometallic BODIPY-Based Molecular Squares Obtained by Self-Assembly: Synthesis and Biological Activities. ACS OMEGA 2019; 4:13200-13208. [PMID: 31460447 PMCID: PMC6705193 DOI: 10.1021/acsomega.9b01328] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Accepted: 07/18/2019] [Indexed: 05/05/2023]
Abstract
Metal-based multinuclear supramolecules with different functionalities designed by self-assembly represent a growing area of research due to their versatile applications, particularly as anticancer agents. Four novel boron dipyrromethene (BODIPY)-based octacationic heterometallic molecular squares, 3-6 were synthesized by self-assembly via reaction of dipyridyl BODIPY ligands with suitable 90° palladium and platinum acceptors. The formation of the as-synthesized molecular squares was confirmed by multinuclear NMR spectroscopy, elemental analysis, high resolution electrospray mass spectrometry, UV-vis spectroscopy, and fluorescence spectroscopy. The square molecular structures of 4 and 6 were further rationalized theoretically using the PM7 semi-empirical method. The activities of the supramolecules against cancer cells were tested using cell lines of various malignant and nonmalignant origins. Complexes 3-6 showed high cytotoxicity toward cancer cells but 7.0 to 15.2 times lower cytotoxic effects were observed against nonmalignant human kidney epithelial cells (HEK-293). Particularly, complexes 3-6 provided 2.1-6.0 times lower IC50 values as compared to cisplatin in HCT116 cells. Interestingly, BDP ligand-containing complexes (3 and 4) induced cytotoxicity through apoptosis, whereas BDPCC-based complexes (5 and 6) induced cell death by necrosis. This study presents a novel series of iron-based heteroatomic palladium and platinum complexes that exhibit substantial potential as drug candidates for anticancer therapy.
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Affiliation(s)
- Gajendra Gupta
- Department
of Energy and Chemical Engineering/Innovation Center for
Chemical Engineering and Department of Chemistry, Incheon National University, Yeonsu-gu, Incheon 22012, Republic of Korea
| | - Yeji You
- Department
of Energy and Chemical Engineering/Innovation Center for
Chemical Engineering and Department of Chemistry, Incheon National University, Yeonsu-gu, Incheon 22012, Republic of Korea
| | - Rizky Hadiputra
- Department
of Chemistry, University of Ulsan, Namgu, Ulsan 44776, Republic of Korea
| | - Jaehoon Jung
- Department
of Chemistry, University of Ulsan, Namgu, Ulsan 44776, Republic of Korea
| | - Dong-Ku Kang
- Department
of Energy and Chemical Engineering/Innovation Center for
Chemical Engineering and Department of Chemistry, Incheon National University, Yeonsu-gu, Incheon 22012, Republic of Korea
| | - Chang Yeon Lee
- Department
of Energy and Chemical Engineering/Innovation Center for
Chemical Engineering and Department of Chemistry, Incheon National University, Yeonsu-gu, Incheon 22012, Republic of Korea
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46
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Singh J, Park DW, Kim DH, Singh N, Kang SC, Chi KW. Coordination-Driven Self-Assembly of Triazole-Based Apoptosis-Inducible Metallomacrocycles. ACS OMEGA 2019; 4:10810-10817. [PMID: 31460178 PMCID: PMC6649141 DOI: 10.1021/acsomega.9b00093] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Accepted: 06/10/2019] [Indexed: 06/10/2023]
Abstract
Ru(II)-metallomacrocycles containing 4-pyridyl-1,2,3-triazole moiety were realized by coordination-driven self-assembly. All new compounds were characterized by electrospray ionisation mass spectrometry, elemental analysis, and 1H and 13C NMR spectroscopic techniques. The molecular structure of metallomacrocycle 8 was determined by single-crystal X-ray crystallography. The anticancer activities of metallomacrocycles 5-8 were evaluated by cytotoxicity, cell cycle analysis, and related protein expression. Metallomacrocycle 7 showed the highest cytotoxicity in HepG2 human hepatocellular carcinoma cells. In addition, apoptotic HepG2 cells were analyzed when metallomacrocycle 7 was treated. Our results suggest that metallomacrocycle 7 induces liver cancer cell death by increasing apoptosis and cell cycle arrest and that it has potential use as an agent for the treatment of human hepatocellular carcinoma.
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Affiliation(s)
- Jatinder Singh
- Department
of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Dae Won Park
- Department
of Oriental Medicine Biotechnology, College of Life Sciences, Kyung Hee University, Yongin 17104, Republic of Korea
| | - Dong Hwan Kim
- Department
of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Nem Singh
- Department
of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
| | - Se Chan Kang
- Department
of Oriental Medicine Biotechnology, College of Life Sciences, Kyung Hee University, Yongin 17104, Republic of Korea
| | - Ki-Whan Chi
- Department
of Chemistry, University of Ulsan, Ulsan 44776, Republic of Korea
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47
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Guo BB, Lin YJ, Jin GX. Design of and Stability Studies on Trefoil Knots Featuring RhCp* Building Blocks. Chemistry 2019; 25:9721-9727. [PMID: 31033058 DOI: 10.1002/chem.201901728] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2019] [Revised: 04/25/2019] [Indexed: 01/17/2023]
Abstract
Four flexible ligands with different lengths, degrees of flexibility, and steric bulk were synthesized and used to prepare metal-directed assemblies. Interestingly, minor differences among the ligands led to products with dramatically different topologies: a binuclear D-shaped macrocycle, tetranuclear rectangles, and hexanuclear trefoil knots. The interconversion of the trefoil-shaped complexes was also investigated. This contribution introduces a rare ligand-controlled trefoil-rectangle shape transformation in solution.
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Affiliation(s)
- Bei-Bei Guo
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai, 200433, P. R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai, 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai, 200433, P. R. China
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48
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Coordination-driven self-assembly of a molecular figure-eight knot and other topologically complex architectures. Nat Commun 2019; 10:2057. [PMID: 31053709 PMCID: PMC6499799 DOI: 10.1038/s41467-019-10075-6] [Citation(s) in RCA: 52] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2018] [Accepted: 04/08/2019] [Indexed: 11/10/2022] Open
Abstract
Over the past decades, molecular knots and links have captivated the chemical community due to their promising mimicry properties in molecular machines and biomolecules and are being realized with increasing frequency with small molecules. Herein, we describe how to utilize stacking interactions and hydrogen-bonding patterns to form trefoil knots, figure-eight knots and [2]catenanes. A transformation can occur between the unique trefoil knot and its isomeric boat-shaped tetranuclear macrocycle by the complementary concentration effect. Remarkably, the realization and authentication of the molecular figure-eight knot with four crossings fills the blank about 41 knot in knot tables. The [2]catenane topology is obtained because the selective naphthalenediimide (NDI)-based ligand, which can engender favorable aromatic donor-acceptor π interactions due to its planar, electron-deficient aromatic surface. The stacking interactions and hydrogen-bond interactions play important roles in these self-assembly processes. The advantages provide an avenue for the generation of structurally and topologically complex supramolecular architectures. Molecular knots and links continue to fascinate synthetic chemists. Here, the authors use stacking and hydrogen-bonding interactions between a set of similar building blocks to construct several complex molecular topologies, including a figure-eight knot and a trefoil knot.
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49
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Sluysmans D, Stoddart JF. The Burgeoning of Mechanically Interlocked Molecules in Chemistry. TRENDS IN CHEMISTRY 2019. [DOI: 10.1016/j.trechm.2019.02.013] [Citation(s) in RCA: 49] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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50
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Leigh DA, Pirvu L, Schaufelberger F. Stereoselective Synthesis of Molecular Square and Granny Knots. J Am Chem Soc 2019; 141:6054-6059. [PMID: 30892025 PMCID: PMC6492950 DOI: 10.1021/jacs.9b01819] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
![]()
We
report on the stereoselective synthesis of both molecular granny
and square knots through the use of lanthanide-complexed overhand
knots of specific handedness as three-crossing “entanglement
synthons”. The composite knots are assembled by combining two
entanglement synthons (of the same chirality for a granny knot; of
opposite handedness for a square knot) in three synthetic steps: first,
a CuAAC reaction joins together one end of each overhand knot. Ring-closing
olefin metathesis (RCM) then affords the closed-loop knot, locking
the topology. This allows the lanthanide ions necessary for stabilizing
the entangled conformation of the synthons to subsequently be removed.
The composite knots were characterized by 1H and 13C NMR spectroscopy and mass spectrometry and the chirality of the
knot stereoisomers compared by circular dichroism. The synthetic strategy
of combining building blocks of defined stereochemistry (here overhand
knots of Λ- or Δ-handed entanglement) is reminiscent of
the chiron approach of using minimalist chiral synthons in the stereoselective
synthesis of molecules with multiple asymmetric centers.
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Affiliation(s)
- David A Leigh
- School of Chemistry , University of Manchester , Oxford Road , Manchester M13 9PL , U.K
| | - Lucian Pirvu
- School of Chemistry , University of Manchester , Oxford Road , Manchester M13 9PL , U.K
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