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Gitlina AY, Petrovskii S, Luginin M, Melnikov A, Rychagova E, Ketkov S, Grachova E. X/Y platinum(II) complexes: some features of supramolecular assembly via halogen bonding. Dalton Trans 2023; 52:16005-16017. [PMID: 37850309 DOI: 10.1039/d3dt02970k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2023]
Abstract
Four series of new luminescent cyclometalated complexes [Pt(C^N)(IPy)Y] (HC^N = 2-phenylpyridine (Hppy), 2-(1-benzofuran-3-yl)pyridine (Hbfpy), methyl-2-phenylquinoline-4-carboxylate (Hmpqc), 2-(1-benzothiophen-3-yl)pyridine (Hbtpy), IPy = 4-iodopyridine, and Y = Cl, Br, I) have been investigated as X/Y 'building blocks' for the construction of a supramolecular network utilizing the I atom in IPy as a halogen bond (XB) donor (the X atom). The σ-hole of the X atom was found to provide non-covalent X⋯Y, X⋯Pt and X⋯π (π system of the metalated chelate ring) interactions for the complexes in the crystal state. NBO analysis confirms donation of the platinum electron density to iodine upon the X⋯Pt interaction. The nature of the X counterpart in XB depends on the nature of the Y atom and the cyclometalating ligand of the Pt(II) complex. DFT calculations show that the HOMO of [Pt(C^N)(IPy)Y] in the S0 state is delocalized over Pt, Y and a C-coordinating fragment of C^N, while the LUMO in most complexes is formed by the Py orbitals of IPy. However, the α-HOMO in the lowest triplet state of [Pt(C^N)(IPy)Y] contains no contribution of the IPy wavefunctions. All Pt(II) complexes exhibited triplet luminescence in solution and in the solid state (Φ up to 0.129), which is determined by the nature of the C^N ligand. The emission profile is independent of the nature of the ligand Y, while the quantum yield decreases from Cl to I. Accordingly, on the basis of DFT calculation, this emission is interpreted as a C^N intraligand charge transfer predominantly. The XB formation did not show an effect on the luminescence of the complexes in the solid phase, however grinding of crystals results in an increase of brightness.
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Affiliation(s)
- Anastasia Yu Gitlina
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
| | - Stanislav Petrovskii
- Institute of Chemistry, St Petersburg University, Universitetskii pr. 26, 198504 St Petersburg, Russia.
| | - Maksim Luginin
- Institute of Chemistry, St Petersburg University, Universitetskii pr. 26, 198504 St Petersburg, Russia.
| | - Alexey Melnikov
- Centre for Nano- and Biotechnologies, Peter the Great St Petersburg Polytechnic University, 195251 St Petersburg, Russia
| | - Elena Rychagova
- G.A. Razuvaev Institute of Organometallic Chemistry, the Russian Academy of Sciences, 603950 Nizhny Novgorod, Russia.
| | - Sergey Ketkov
- G.A. Razuvaev Institute of Organometallic Chemistry, the Russian Academy of Sciences, 603950 Nizhny Novgorod, Russia.
| | - Elena Grachova
- Institute of Chemistry, St Petersburg University, Universitetskii pr. 26, 198504 St Petersburg, Russia.
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Thangavadivale VG, Tendera L, Bertermann R, Radius U, Beweries T, Perutz RN. Solution and solid-state studies of hydrogen and halogen bonding with N-heterocyclic carbene supported nickel(II) fluoride complexes. Faraday Discuss 2023; 244:62-76. [PMID: 37097153 DOI: 10.1039/d2fd00171c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Nickel fluoride complexes of the type [Ni(F)(L)2(ArF)] (L = phosphine, ArF = fluorinated arene) are well-known to form strong halogen and hydrogen bonds in solution and in the solid state. A comprehensive study of such non-covalent interactions using bis(carbene) complexes as acceptors and suitable halogen and hydrogen bond donors is presented. In solution, the complex [Ni(F)(iPr2Im)2(C6F5)] forms halogen and hydrogen bonds with iodopentafluorobenzene and indole, respectively, which have formation constants (K300) an order of magnitude greater than those of structurally related phosphine supported nickel fluorides. Co-crystallisation of this complex and its backbone-methylated analogue [Ni(F)(iPr2Me2Im)2(C6F5)] with 1,4-diiodotetrafluorobenzene produces halogen bonding adducts which were characterised by X-ray analysis and 19F MAS solid state NMR analysis. Differences in the chemical shifts between the nickel fluoride and its halogen bonding adduct are well in line with data that were obtained from titration studies in solution.
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Affiliation(s)
| | - Lukas Tendera
- Institut für Anorganische Chemie, Julius-Maximilians-Universität, Am Hubland, 97074 Würzburg, Germany.
| | - Rüdiger Bertermann
- Institut für Anorganische Chemie, Julius-Maximilians-Universität, Am Hubland, 97074 Würzburg, Germany.
| | - Udo Radius
- Institut für Anorganische Chemie, Julius-Maximilians-Universität, Am Hubland, 97074 Würzburg, Germany.
| | - Torsten Beweries
- Leibniz-Institut für Katalyse, Albert-Einstein-Str. 29a, 18059 Rostock, Germany.
| | - Robin N Perutz
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK.
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Two-Dimensional and Three-Dimensional Coordination Polymers Based on Ln(III) and 2,5-Diiodoterephthalates: Structures and Luminescent Behavior. INORGANICS 2022. [DOI: 10.3390/inorganics10120262] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Five new coordination polymers based on Ln3+ and 2,5-diiodoterephthalates (2,5-I-bdc)— {[La2(2,5-I-bdc)3(DMF)4]}·2DMF (1) and {[Ln2(2,5-I-bdc)3(DMF)4]} (Ln = La (2), Nd (3), Sm (4) and Eu (5))—were prepared and characterized by single crystal and powder X-ray diffractometry. Luminescent behavior was examined (the highest quantum yield is 4.5%); thermal stability was examined using thermogravimetric analysis.
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Baykov SV, Ivanov DM, Kasatkina SO, Galmés B, Frontera A, Resnati G, Kukushkin VY. Stacking Interactions: A Supramolecular Approach to Upgrade Weak Halogen Bond Donors. Chemistry 2022; 28:e202201869. [PMID: 36178324 PMCID: PMC10099561 DOI: 10.1002/chem.202201869] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Indexed: 11/10/2022]
Abstract
The co-crystallization of tetracyanobenzene (TCB) with haloarenes ArX provided six new co-crystals TCB ⋅ ArX (ArX=PhCl, PhBr, 4-MeC6 H4 Cl, 4-MeC6 H4 Br, 4-MeOC6 H4 Cl, 1,2-Br2 C6 H4 ) which were studied by X-ray diffraction. In these systems, the strong collective effect of π⋅⋅⋅π stacking interactions and lone pair-(X)⋅⋅⋅π-hole-(C) bondings between TCB and ArX promote the strength of X⋅⋅⋅Ncyano halogen bonding (HaB). Theoretical studies showed that the stacking interactions affect the σ-hole depth of the haloarenes, thus significantly boosting their ability to function as HaB donors. According to the molecular electrostatic potential calculations, the σ- hole-(Cl) value (1.5 kcal/mol) in the haloarene 4-MeOC6 H4 Cl (featuring an electron-rich arene moiety and exhibiting very poor σ-hole-(Cl) ability) increases significantly in the stacked trimer (TCB)2 ⋅ 4-MeOC6 H4 Cl (12.5 kcal/mol). Theoretical DFT calculations demonstrate the dramatic increase of X⋅⋅⋅Ncyano HaB strength for stacked trimers in comparison with parent unstacked haloarenes.
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Affiliation(s)
- Sergey V. Baykov
- Institute of ChemistrySaint Petersburg State University7/9 Universitetskaya Nab.Saint Petersburg199034Russian Federation
- Research School of Chemistry and Applied Biomedical SciencesTomsk Polytechnic UniversityTomsk634034Russian Federation
| | - Daniil M. Ivanov
- Institute of ChemistrySaint Petersburg State University7/9 Universitetskaya Nab.Saint Petersburg199034Russian Federation
- Research School of Chemistry and Applied Biomedical SciencesTomsk Polytechnic UniversityTomsk634034Russian Federation
| | - Svetlana O. Kasatkina
- Institute of ChemistrySaint Petersburg State University7/9 Universitetskaya Nab.Saint Petersburg199034Russian Federation
| | - Bartomeu Galmés
- Departament de QuímicaUniversitat de les Illes BalearsCrta de Valldemossa km 7.507122Palma de Mallorca, BalearesSpain
| | - Antonio Frontera
- Departament de QuímicaUniversitat de les Illes BalearsCrta de Valldemossa km 7.507122Palma de Mallorca, BalearesSpain
| | - Giuseppe Resnati
- Research School of Chemistry and Applied Biomedical SciencesTomsk Polytechnic UniversityTomsk634034Russian Federation
- NFMLabDepartment of Chemistry, Materials, Chemical Engineering“Giulio Natta Politecnico di Milano”via Mancinelli 7I-20131MilanoItaly
| | - Vadim Y. Kukushkin
- Institute of ChemistrySaint Petersburg State University7/9 Universitetskaya Nab.Saint Petersburg199034Russian Federation
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Novikov AS, Sakhapov IF, Zaguzin AS, Fedin VP, Adonin SA. HALOGEN BOND IN POROUS MATERIALS: RATIONAL SELECTION OF BUILDING BLOCKS. J STRUCT CHEM+ 2022. [DOI: 10.1134/s002247662211018x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Gavrilov GA, Kinzhalov MA. Isocyanide-Phosphine Complexes of Palladium(II) Dihalides: Synthesis, Structure, and Resistance to Ligand Disproportionation Reactions. RUSS J GEN CHEM+ 2022. [DOI: 10.1134/s1070363222110123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Popov RA, Mikherdov AS, Boyarskiy VP. Pyridine‐2(1H)‐thione as a bifunctional nucleophile in reaction with PdII and PtII aryl isocyanide complexes. Eur J Inorg Chem 2022. [DOI: 10.1002/ejic.202200217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Roman A. Popov
- Saint Petersburg State University Institute of Chemistry: Sankt-Peterburgskij gosudarstvennyj universitet Institut himii Chemistry Universitetskaya emb., 7–9 199034 Saint Petersburg RUSSIAN FEDERATION
| | - Alexander S. Mikherdov
- Saint Petersburg State University Institute of Chemistry: Sankt-Peterburgskij gosudarstvennyj universitet Institut himii Chemistry RUSSIAN FEDERATION
| | - Vadim P. Boyarskiy
- Saint-Petersburg State University: Sankt-peterburgskij gosudarstvennyj universitet Institute of Chemistry Petrodvorets, Universitetskiy 26 198504 Saint Petersburg RUSSIAN FEDERATION
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Rajakumar K, Sharutin VV, Adonin SA, Zherebtsov DA, Sakhapov IF, Islamov DR, Prabunatan P, Vershinin MA, Naifert SA, Polozov MA. DI- AND TETRAIODOXYLENES: STRUCTURE AND FEATURES OF NON-COVALENT INTERACTIONS IN A SOLID STATE. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622040138] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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Intermolecular (Isocyano group)···PtII interactions involving coordinated isocyanides in cyclometalated PtII complexes. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.132230] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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10
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Zaguzin AS, Sukhikh TS, Sakhapov IF, Fedin VP, Sokolov MN, Adonin SA. Zn(II) and Co(II) 3D Coordination Polymers Based on 2-Iodoterephtalic Acid and 1,2-bis(4-pyridyl)ethane: Structures and Sorption Properties. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27041305. [PMID: 35209092 PMCID: PMC8876937 DOI: 10.3390/molecules27041305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Revised: 02/04/2022] [Accepted: 02/06/2022] [Indexed: 11/28/2022]
Abstract
Metal-organic frameworks [M2(2-I-bdc)2bpe] (M = Zn(II) (1), Co(II) (2), 2-I-bdc = 2-iodoterephtalic acid, and bpe = 1,2-bis(4-pyridyl)ethane) were prepared and characterized by X-ray diffractometry. Both compounds retain their 3D structure after the removal of guest DMF molecules. Selectivity of sorption of different organic substrates from the gas phase was investigated for both complexes.
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Affiliation(s)
- Alexander S. Zaguzin
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Taisiya S. Sukhikh
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Ilyas F. Sakhapov
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Arbuzov Institute of Organic and Physical Chemistry, RAS, Arbuzov St. 8, 420088 Kazan, Russia
| | - Vladimir P. Fedin
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Maxim N. Sokolov
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Sergey A. Adonin
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
- Correspondence:
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11
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Kinzhalov MA, Luzyanin KV. Synthesis and Contemporary Applications of Platinum Group Metals Complexes with Acyclic Diaminocarbene Ligands (Review). RUSS J INORG CHEM+ 2022. [DOI: 10.1134/s0036023622010065] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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12
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Kashina MV, Luzyanin KV, Katlenok E, Novikov AS, Kinzhalov MA. Experimental and Computational Tuning of Metalla-N-Heterocyclic Carbenes at Palladium(II) and Platinum(II) Centers. Dalton Trans 2022; 51:6718-6734. [DOI: 10.1039/d2dt00252c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Palladium(II) and platinum(II) complexes featuring metalla-N-heterocyclic carbenes (7–12) were synthesised via metal-mediated coupling between equimolar cis-[MCl2(CNR)2] (R = 2,6-Me2C6H3 (Xyl), 2,4,6-Me3C6H3 (Mes)] and 2-aminopyridine or 2-aminopyrazine. Thiocyanate complexes 13–18 with...
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Kinzhalov MA, Ivanov DM, Melekhova AA, Bokach NA, Gomila RM, Frontera A, Kukushkin VY. Chameleonic Metal-bound Isocyanides: π-Donating CuI-center Imparts a Nucleophilicity to the Isocyanide Carbon toward Halogen Bonding. Inorg Chem Front 2022. [DOI: 10.1039/d2qi00034b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In the structures of the isostructural cocrystals [CuI3(CNXyl)3]·CHX3 (X = Br, I), two adjacent CuI-bound isocyanide groups, whose carbon lone pairs are blocked by the ligation, exhibit nucleophilic properties induced...
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Gurbanov AV, Kuznetsov ML, Karmakar A, Aliyeva VA, Mahmudov KT, Pombeiro AJL. Halogen bonding in cadmium(II) MOFs: its influence on the structure and on the nitroaldol reaction in aqueous medium. Dalton Trans 2021; 51:1019-1031. [PMID: 34935834 DOI: 10.1039/d1dt03755b] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A solvothermal reaction of Cd(II) with the dicarboxyl-functionalized arylhydrazone pro-ligands, 5-(2-(2,4,6-trioxotetrahydro-pyrimidin-5(2H)-ylidene)hydrazineyl)isophthalic acid (H5L1) and 5-(2-(2,4-dioxopentan-3-ylidene)hydrazineyl)isophthalic acid (H3L2), or their halogen bond donor centre(s) decorated analogs 2,4,6-triiodo-5-(2-(2,4,6-trioxotetrahydropyrimidin-5(2H)-ylidene)hydrazineyl)isophthalic acid (H5L3) and 5-(2-(2,4-dioxopentan-3-ylidene)hydrazineyl)-2,4,6-triiodoisophthalic acid (H3L4), leads to the formation of known [Cd(H3L1)(H2O)2]n (1) and new {[Cd(HL2)(H2O)2(DMF)]·H2O}n (2), [Cd(H3L3)]n (3) and {[Cd2(μ-H2O)2(μ-H2L4)2(H2L4)2]·2H2O}n (4) coordination compounds, respectively. The aggregation of mononuclear units via Cd-OC and Cd-OH2 coordination and CAr-I⋯I types of intramolecular halogen bonds lead to a dinuclear tecton 4. Both CAr-I⋯O and CAr-I⋯I types of intermolecular halogen bonds play a fundamental role in the supramolecular architectures of the obtained metal-organic frameworks 3 and 4. Theoretical (DFT) calculations confirmed the presence of the CAr-I⋯O and CAr-I⋯I halogen bonds in 3 and 4 and allowed their characterisation. The formation of intermolecular noncovalent interactions between the attached iodine substituents to the hydrazone ligands and polar solvent (water or methanol) molecules promoted, at least in part, the solubility of the corresponding complexes (3 and 4), which act as homogeneous catalyst precursors in the Henry reaction between aldehydes and nitroethane. The corresponding β-nitroalkanol products were obtained in good yields (66-79%) and with good diastereoselectivity (threo/erythro ca. 72 : 28) in water at room temperature.
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Affiliation(s)
- Atash V Gurbanov
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal. .,Department of Chemistry, Baku State University, Z. Xalilov Str. 23, Az 1148 Baku, Azerbaijan.
| | - Maxim L Kuznetsov
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
| | - Anirban Karmakar
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
| | - Vusala A Aliyeva
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
| | - Kamran T Mahmudov
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal. .,Department of Chemistry, Baku State University, Z. Xalilov Str. 23, Az 1148 Baku, Azerbaijan.
| | - Armando J L Pombeiro
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal. .,Peoples' Friendship University of Russia (RUDN University), Research Institute of Chemistry, 6 Miklukho-Maklaya St, Moscow, 117198, Russian Federation
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The Isocyanide Complexes cis-[MCl2(CNC6H4-4-X)2] (M = Pd, Pt; X = Cl, Br) as Tectons in Crystal Engineering Involving Halogen Bonds. CRYSTALS 2021. [DOI: 10.3390/cryst11070799] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The isocyanide complexes cis-[MCl2(CNC6H4-4-X)2] (M = Pd; X = Cl, Br; M = Pt; X = Br) form isomorphous crystal structures exhibiting the Cl/Br and Pd/Pt exchanges featuring 1D chains upon crystallisation. Crystal packing is supported by the C–X···X–C halogen bonds (HaBs), C–H···X–C hydrogen bonds (HB), X···M semicoordination, and C···C contacts between the C atoms of aryl isocyanide ligands. The results of DFT calculations and topological analysis indicate that all the above contact types belong to attractive noncovalent interactions. A projection of the electron localization function (ELF) and an inspection of the electron density (ED) and the electrostatic potential (ESP) reveal the amphiphilic nature of X atoms playing the role of HaB donors, HaB and HB acceptors, and a nucleophilic partner in X···M semicoordination.
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Bromoantimonates with bis(pyridinium)-type dications obtained via oxidation by dibromine: Diverse structural types and features of interactions pattern. Polyhedron 2021. [DOI: 10.1016/j.poly.2021.115217] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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17
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Bondarenko MA, Novikov AS, Adonin SA. Mononuclear Zn(II) 3,5-Diiodosalicylate Complex with 3-Chloropyridine: Synthesis and Features of Non-Covalent Interactions in the Solid State. RUSS J INORG CHEM+ 2021. [DOI: 10.1134/s0036023621060061] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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18
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Baykov SV, Geyl KK, Ivanov DM, Gomila RM, Frontera A, Kukushkin VY. Azine Steric Hindrances Switch Halogen Bonding to N-Arylation upon Interplay with σ-Hole Donating Haloarenenitriles. Chem Asian J 2021; 16:1445-1455. [PMID: 33844884 DOI: 10.1002/asia.202100282] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 04/11/2021] [Indexed: 12/24/2022]
Abstract
An interplay between 4-bromo- and 4-iodo-5-nitrophthalonitriles (XNPN, X=Br or I) and any one of the azines (pyridine 1, 4-dimethylaminopyridine 2, isoquinoline 3, 4-cyanopyridine 4, 2-methylpyridine 5, 2-aminopyridine 6, quinoline 7, 1-methylisoquinoline 8, and 2,2'-bipyridine 9) proceeds differently depending on steric and electronic effects of the heterocycles. Sterically unhindered azines 1-3 underwent N-arylation to give the corresponding azinium salts (characterized by 1 H and 13 C{H} NMR and high-resolution ESI-MS). In contrast, azines 4-9 with sterically hindered N atoms or bearing an electron-withdrawing substituent, form stable co-crystals with XNPN, where two interacting molecules are bound by halogen bonding. In all obtained co-crystals, X⋅⋅⋅N structure-directed halogen bonds were recognized and theoretically evaluated including DFT calculations (PBE0-D3/def2-TZVP level of theory), QTAIM analysis, molecular electrostatic potential surfaces, and noncovalent interaction plot index. Estimated energies of halogen bonding vary from -7.6 kcal/mol (for 6 ⋅ INPN) to -11.4 kcal/mol (5 ⋅ INPN).
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Affiliation(s)
- Sergey V Baykov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Nab., Saint Petersburg, 199034, Russian Federation
| | - Kirill K Geyl
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Nab., Saint Petersburg, 199034, Russian Federation
| | - Daniil M Ivanov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Nab., Saint Petersburg, 199034, Russian Federation
| | - Rosa M Gomila
- Serveis Científico-Tècnics, Universitat de les Illes Balears, Crta de Valldemossa km 7.5, 07122, Palma de Mallorca (Baleares), Spain
| | - Antonio Frontera
- Departament de Química, Universitat de les Illes Balears, Crta de Valldemossa km 7.5, 07122, Palma de Mallorca (Baleares), Spain
| | - Vadim Y Kukushkin
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Nab., Saint Petersburg, 199034, Russian Federation.,Laboratory of Crystal Engineering of Functional Materials, South Ural State University, 76 Lenin Av., Chelyabinsk, 454080, Russian Federation
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Bondarenko MA, Novikov AS, Abramov PA, Sakhapov IF, Sokolov MN, Adonin SA. 2,3,4,5-Tetraiodopyrrole as a building block for halogen bonding: Formation of supramolecular hybrids with organic iodide salts in solid state. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.129931] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Katkova SA, Eliseev II, Mikherdov AS, Sokolova EV, Starova GL, Kinzhalov MA. Cyclometalated Platinum(II) Complexes with Nitrile and Isocyanide Ligands: Synthesis, Structure, and Photophysical Properties. RUSS J GEN CHEM+ 2021. [DOI: 10.1134/s1070363221030099] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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21
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Jiménez‐Grávalos F, Gallegos M, Martín Pendás Á, Novikov AS. Challenging the electrostatic
σ
‐hole picture of halogen bonding using minimal models and the interacting quantum atoms approach. J Comput Chem 2021; 42:676-687. [DOI: 10.1002/jcc.26488] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Revised: 01/10/2021] [Accepted: 01/18/2021] [Indexed: 12/14/2022]
Affiliation(s)
| | - Miguel Gallegos
- Department of Analytical and Physical Chemistry University of Oviedo Oviedo Spain
| | - Ángel Martín Pendás
- Department of Analytical and Physical Chemistry University of Oviedo Oviedo Spain
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22
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Mikherdov AS, Popov RA, Kinzhalov MA, Haukka M, Polukeev VA, Boyarskiy VP, Roodt A. Reaction mechanism of regioisomerization in binuclear (diaminocarbene)PdII complexes. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2020.120012] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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23
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Katkova SA, Luzyanin KV, Novikov AS, Kinzhalov MA. Modulation of luminescence properties for [cyclometalated]-Pt II(isocyanide) complexes upon co-crystallisation with halosubstituted perfluorinated arenes. NEW J CHEM 2021. [DOI: 10.1039/d0nj05457g] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
C–X⋯Cl–Pt Halogen bonds and πh⋯dz2[PtII] contacts led to the 2-fold increase of phosphorescence quantum yields for [cyclometalated]-PtII(isocyanide) complexes upon co-crystallisation with halosubstituted perfluorinated arenes.
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Affiliation(s)
- Svetlana A. Katkova
- Saint Petersburg State University
- 7/9 Universitetskaya Nab
- Saint Petersburg 199034
- Russian Federation
| | | | - Alexander S. Novikov
- Saint Petersburg State University
- 7/9 Universitetskaya Nab
- Saint Petersburg 199034
- Russian Federation
| | - Mikhail A. Kinzhalov
- Saint Petersburg State University
- 7/9 Universitetskaya Nab
- Saint Petersburg 199034
- Russian Federation
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Nemec V, Lisac K, Bedeković N, Fotović L, Stilinović V, Cinčić D. Crystal engineering strategies towards halogen-bonded metal–organic multi-component solids: salts, cocrystals and salt cocrystals. CrystEngComm 2021. [DOI: 10.1039/d1ce00158b] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
This highlight presents an overview of the current advances in the preparation of halogen bonded metal–organic multi-component solids, including salts and cocrystals comprising neutral and ionic constituents.
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Affiliation(s)
- Vinko Nemec
- Department of Chemistry
- Faculty of Science
- University of Zagreb
- HR-10000 Zagreb
- Croatia
| | - Katarina Lisac
- Department of Chemistry
- Faculty of Science
- University of Zagreb
- HR-10000 Zagreb
- Croatia
| | - Nikola Bedeković
- Department of Chemistry
- Faculty of Science
- University of Zagreb
- HR-10000 Zagreb
- Croatia
| | - Luka Fotović
- Department of Chemistry
- Faculty of Science
- University of Zagreb
- HR-10000 Zagreb
- Croatia
| | - Vladimir Stilinović
- Department of Chemistry
- Faculty of Science
- University of Zagreb
- HR-10000 Zagreb
- Croatia
| | - Dominik Cinčić
- Department of Chemistry
- Faculty of Science
- University of Zagreb
- HR-10000 Zagreb
- Croatia
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25
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Hybrid chlorobismuthate(III) “trapping” Br2 unit: Crystal structure and theoretical investigation of non-covalent Cl⋯Br interactions in (1-MePy)3{[Bi2Cl9](Br2)}. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2020.119932] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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26
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Yunusova SN, Bolotin DS, Vovk MA, Tolstoy PM, Kukushkin VY. Tetrabromomethane as an Organic Catalyst: a Kinetic Study of CBr
4
‐Catalyzed Schiff Condensation. European J Org Chem 2020. [DOI: 10.1002/ejoc.202001180] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Sevilya N. Yunusova
- Institute of Chemistry Saint Petersburg State University Universitetskaya Nab. 7/9 Saint Petersburg Russian Federation
| | - Dmitrii S. Bolotin
- Institute of Chemistry Saint Petersburg State University Universitetskaya Nab. 7/9 Saint Petersburg Russian Federation
| | - Mikhail A. Vovk
- Center for Magnetic Resonance Saint Petersburg State University Saint Petersburg Russian Federation
| | - Peter M. Tolstoy
- Institute of Chemistry Saint Petersburg State University Universitetskaya Nab. 7/9 Saint Petersburg Russian Federation
| | - Vadim Yu. Kukushkin
- Institute of Chemistry Saint Petersburg State University Universitetskaya Nab. 7/9 Saint Petersburg Russian Federation
- Laboratory of Crystal Engineering of Functional Materials South Ural State University 76, Lenin Av. 454080 Chelyabinsk Russian Federation
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27
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Baikov SV, Trukhanova YA, Tarasenko MV, Kinzhalov MA. Synthesis and Study of the Structure of Palladium(II) Acyclic
Diaminocarbene Complexes Containing a 1,2,4-Oxadiazole Moiety. RUSS J GEN CHEM+ 2020. [DOI: 10.1134/s1070363220100126] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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28
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Bondarenko MA, Novikov AS, Fedin VP, Sokolov MN, Adonin SA. The stabilization of decabromide {Br10}2− anion in the structure of Sb(V) bromide complex. J COORD CHEM 2020. [DOI: 10.1080/00958972.2020.1837785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
| | - Alexander S. Novikov
- Institute of Chemistry, Saint Petersburg State University, Saint Petersburg, Russia
| | - Vladimir P. Fedin
- Nikolaev Institute of Inorganic Chemistry SB RAS, Novosibirsk, Russia
| | - Maxim N. Sokolov
- Nikolaev Institute of Inorganic Chemistry SB RAS, Novosibirsk, Russia
| | - Sergey A. Adonin
- Nikolaev Institute of Inorganic Chemistry SB RAS, Novosibirsk, Russia
- South Ural State University, Chelyabinsk, Russia
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Abstract
The problem of non-covalent interactions in coordination and organometallic compounds is a hot topic in modern chemistry, material science, crystal engineering and related fields of knowledge. Researchers in various fields of chemistry and other disciplines (physics, crystallography, computer science, etc.) are welcome to submit their works on this topic for our Special Issue “Non-Covalent Interactions in Coordination and Organometallic Chemistry”. The aim of this Special Issue is to highlight and overview modern trends and draw the attention of the scientific community to various types of non-covalent interactions in coordination and organometallic compounds. In this editorial, I would like to briefly highlight the main successes of our research group in the field of the fundamental study of non-covalent interactions in coordination and organometallic compounds over the past 5 years.
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30
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Mikherdov AS, Novikov AS, Boyarskiy VP, Kukushkin VY. The halogen bond with isocyano carbon reduces isocyanide odor. Nat Commun 2020; 11:2921. [PMID: 32523100 PMCID: PMC7286913 DOI: 10.1038/s41467-020-16748-x] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2019] [Accepted: 05/21/2020] [Indexed: 12/24/2022] Open
Abstract
Predominantly, carbon atoms of various species function as acceptors of noncovalent interactions when they are part of a π-system. Here, we report on the discovery of a halogen bond involving the isocyano carbon lone pair. The co-crystallization or mechanochemical liquid-assisted grinding of model mesityl isocyanide with four iodoperfluorobenezenes leads to a series of halogen-bonded adducts with isocyanides. The obtained adducts were characterized by single-crystal and powder X-ray diffraction, solid-state IR and 13C NMR spectroscopies, and also by thermogravimetric analysis. The formation of the halogen bond with the isocyano group leads to a strong reduction of the isocyanide odor (3- to 46-fold gas phase concentration decrease). This manipulation makes isocyanides more suitable for laboratory storage and usage while preserving their reactivity, which is found to be similar between the adducts and the parent isocyanide in some common transformations, such as ligation to metal centers and the multi-component Ugi reaction. Carbon atoms of various species typically function as acceptors of noncovalent interactions when they are part of a π-system. Here, the authors report their discovery of a noncovalent halogen bond involving the isocyano carbon lone pair, which results in adducts with strongly reduced isocyanide odor.
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Affiliation(s)
- Alexander S Mikherdov
- Saint Petersburg State University, Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation.
| | - Alexander S Novikov
- Saint Petersburg State University, Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation
| | - Vadim P Boyarskiy
- Saint Petersburg State University, Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation
| | - Vadim Yu Kukushkin
- Saint Petersburg State University, Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation.
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31
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Bondarenko MA, Adonin SA, Novikov AS, Sokolov MN, Fedin VP. Supramolecular Bromoantimonate(V) Polybromide (2,6-BrPyH)3[SbBr6]{(Br2)Br} · 2H2O: Specific Features of Halogen···Halogen Contacts in the Crystal Structure. RUSS J COORD CHEM+ 2020. [DOI: 10.1134/s1070328420040016] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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32
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New Crystal Forms for Biologically Active Compounds. Part 2: Anastrozole as N-Substituted 1,2,4-Triazole in Halogen Bonding and Lp-π Interactions with 1,4-Diiodotetrafluorobenzene. CRYSTALS 2020. [DOI: 10.3390/cryst10050371] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
For an active pharmaceutical ingredient, it is important to stabilize its specific crystal polymorph. If the potential interconversion of various polymorphs is not carefully controlled, it may lead to deterioration of the drug’s physicochemical profile and, ultimately, its therapeutic efficacy. The desired polymorph stabilization can be achieved via co-crystallization with appropriate crystallophoric excipients. In this work, we identified an opportunity for co-crystallization of anastrozole (ASZ), a well-known aromatase inhibitor useful in second-line therapy of estrogen-dependent breast cancer, with a classical XB donor, 1,2,4,5-tetrafluoro-3,6-diiodobenzene (1,4-FIB). In the X-ray structures of ASZ·1.5 (1,4-FIB) co-crystal, different non-covalent interactions involving hydrogen and halogen atoms were detected and studied by quantum chemical calculations and QTAIM analysis at the ωB97XD/DZP-DKH level of theory.
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33
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Adonin SA, Novikov AS, Smirnova YK, Tushakova ZR, Fedin VP. Heteroligand Cu(II) Complexes with 2-Halogenopyridines: Crystal Structure and Features of Halogen⋯Halogen Contacts in the Solid State. J STRUCT CHEM+ 2020. [DOI: 10.1134/s0022476620050066] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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34
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Abstract
Three complexes [Co(2-XPy)2Cl2] (X = Cl, Br, and I) were prepared and characterized, representing a rare case of isostructurality within the Cl-Br-I row. The nature of halogen bonding (XB) in a solid state was studied by DFT calculations, revealing a tendency of XB energy growth for heavier halogens.
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35
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Katkova SA, Leshchev AA, Mikherdov AS, Kinzhalov MA. Synthesis of Cyclometalated Platinum(II) Complex with an Alkynyl-Substituted Isocyanide Ligand, Its Structure and Photophysical Properties. RUSS J GEN CHEM+ 2020. [DOI: 10.1134/s1070363220040143] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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36
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Halogen Bonding Provides Heterooctameric Supramolecular Aggregation of Diaryliodonium Thiocyanate. CRYSTALS 2020. [DOI: 10.3390/cryst10030230] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The crystal structure of the newly synthesized 4-methoxyphenyl(phenyl)iodonium thiocyanate, [PhI(4-C6H4OMe)](SCN), represents the first example of 16-membered cyclic heterooctamer formed by halogen bonding between the iodonium cation and SCN−. Results of density functional theory (DFT) calculations followed by the topological analysis of the electron density distribution within the framework of the quantum theory of atoms in molecules (QTAIM) method at the ωB97XD/DZP-DKH level of theory reveal that energies of attractive intermolecular noncovalent interactions I···S and I···N (responsible for the formation of heterooctameric supramolecular clusters {PhI(4-C6H4OMe)}4·{SCN}4 in the solid state structure of [PhI(4-C6H4OMe)](SCN)) vary from 0.9 to 8.5 kcal/mol.
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37
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Adonin SA, Novikov AS, Fedin VP. Heteroleptic Binuclear Iodoacetate Copper(II) Complexes with 3-Bromopyridine and 4-Ethylpyridine: Crystal Structures and Peculiarities of Contacts Halogen···Halogen. RUSS J COORD CHEM+ 2020. [DOI: 10.1134/s1070328420020013] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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38
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Adonin SA, Usoltsev AN, Novikov AS, Kolesov BA, Fedin VP, Sokolov MN. One- and Two-Dimensional Iodine-Rich Iodobismuthate(III) Complexes: Structure, Optical Properties, and Features of Halogen Bonding in the Solid State. Inorg Chem 2020; 59:3290-3296. [PMID: 32037811 DOI: 10.1021/acs.inorgchem.9b03734] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Reactions of BiI3, I2, and iodide salts of two different pyridinum cations result in the formation of the novel iodine-rich iodobismuthates(III) (1,3-MePy)4{[Bi4I16](I2)} (1) and (1-MePy){[BiI4](I2)0.5) (2), where the halometalate anions are connected by diiodine linkers into one- or two-dimensional supramolecular structures. Both complexes reveal narrow optical band gaps and fairly high thermal stability, favoring their potential use in photovoltaic devices.
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Affiliation(s)
- Sergey A Adonin
- Nikolaev Institute of Inorganic Chemistry SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia.,Novosibirsk State University, Pirogova St. 3, 630090 Novosibirsk, Russia.,Tobolsk Industrial Institute (Branch of Tyumen Industrial Univeristy), Zony Vuzov 5, 626158 Tobolsk, Russia.,South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia
| | - Andrey N Usoltsev
- Nikolaev Institute of Inorganic Chemistry SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia
| | - Alexander S Novikov
- Saint Petersburg State University, Institute of Chemistry, Universitetskaya Nab. 7-9, 199034, Saint Petersburg, Russia
| | - Boris A Kolesov
- Nikolaev Institute of Inorganic Chemistry SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia.,Novosibirsk State University, Pirogova St. 3, 630090 Novosibirsk, Russia
| | - Vladimir P Fedin
- Nikolaev Institute of Inorganic Chemistry SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia.,Novosibirsk State University, Pirogova St. 3, 630090 Novosibirsk, Russia
| | - Maxim N Sokolov
- Nikolaev Institute of Inorganic Chemistry SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia.,Novosibirsk State University, Pirogova St. 3, 630090 Novosibirsk, Russia
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39
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Adonin SA, Bondarenko MA, Novikov AS, Plyusnin PE, Korolkov IV, Sokolov MN, Fedin VP. Five new Sb(V) bromide complexes and their polybromide derivatives with pyridinium-type cations: Structures, thermal stability and features of halogen⋯halogen contacts in solid state. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2019.119278] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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40
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von der Heiden D, Vanderkooy A, Erdélyi M. Halogen bonding in solution: NMR spectroscopic approaches. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2019.213147] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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41
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Efimenko ZM, Novikov AS, Ivanov DM, Piskunov AV, Vereshchagin AA, Levin OV, Bokach NA, Kukushkin VY. The (Dioximate)Ni II/I 2 System: Ligand Oxidation and Binding Modes of Triiodide Species. Inorg Chem 2020; 59:2316-2327. [PMID: 32027131 DOI: 10.1021/acs.inorgchem.9b03132] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Reinvestigation of (o-benzoquinonedioximate)2Ni/I2 systems demonstrated that the reaction itself and also the crystallization conditions dramatically affect the identity of generated species. Crystallization (CHCl3, 20-25 °C) of the nickel(II) dioximate complex [Ni(bqoxH)2] (bqoxH2 = o-benzoquinonedioxime) with I2 in the 1:(1-10) molar ratios of the reactants led to several (o-benzoquinonedioximate)2Ni derivatives and/or iodine adducts [Ni(I)(bqoxH)(bqoxH2)]·3/2I2, [Ni(I3)(bqoxH)(bqoxH2)]·[Ni(bqoxH)2], and [Ni(I3)(bqox•-)(bqoxH2)]·I2; the latter one, featuring the anion-radical bqox•- ligand, is derived from the formal (-2H+/1e-)-oxidation of bqoxH2. In these three adducts, various types of noncovalent interactions were identified experimentally and their existence was supported theoretically. The [Ni(I3)(bqox•-)(bqoxH2)]·I2 adduct exhibits simultaneous semicoordination and coordination patterns of the triiodide ligand; this is the first recognition of the semicoordination of any polyiodide ligand to a metal center. The semicoordination noncovalent contact Ni···I3 (3.7011(10) Å) is substantially longer that the Ni-I3 coordination bond (2.8476(9) Å), and the difference in energies between these two types of linkages is 8-12 kcal/mol.
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Affiliation(s)
- Zarina M Efimenko
- Institute of Chemistry , Saint Petersburg State University , Universitetskaya Nab. 7/9 , 199034 Saint Petersburg , Russian Federation
| | - Alexander S Novikov
- Institute of Chemistry , Saint Petersburg State University , Universitetskaya Nab. 7/9 , 199034 Saint Petersburg , Russian Federation
| | - Daniil M Ivanov
- Institute of Chemistry , Saint Petersburg State University , Universitetskaya Nab. 7/9 , 199034 Saint Petersburg , Russian Federation
| | - Alexandr V Piskunov
- G.A. Razuvaev Institute of Organometallic Chemistry , Russian Academy of Sciences , Tropinina Str. 49 , 603950 Nizhny Novgorod , Russian Federation
| | - Anatoly A Vereshchagin
- Institute of Chemistry , Saint Petersburg State University , Universitetskaya Nab. 7/9 , 199034 Saint Petersburg , Russian Federation
| | - Oleg V Levin
- Institute of Chemistry , Saint Petersburg State University , Universitetskaya Nab. 7/9 , 199034 Saint Petersburg , Russian Federation
| | - Nadezhda A Bokach
- Institute of Chemistry , Saint Petersburg State University , Universitetskaya Nab. 7/9 , 199034 Saint Petersburg , Russian Federation
| | - Vadim Yu Kukushkin
- Institute of Chemistry , Saint Petersburg State University , Universitetskaya Nab. 7/9 , 199034 Saint Petersburg , Russian Federation
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42
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Adonin SA, Novikov AS, Fedin VP. Crystal Structure of the Heteroligand Complex [(2-Br-5-MePy)2CoCl2] · (2-Br-5-MePy): Formation of Supramolecular Associates due to the Halogen Bond. RUSS J COORD CHEM+ 2020. [DOI: 10.1134/s1070328420010017] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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43
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Chupina AV, Shayapov V, Novikov AS, Volchek VV, Benassi E, Abramov PA, Sokolov MN. [{AgL}2Mo8O26]n– complexes: a combined experimental and theoretical study. Dalton Trans 2020; 49:1522-1530. [DOI: 10.1039/c9dt04043a] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two sets of silver–molybdate complexes with L = XR3 (X = P, As, Sb; R3 = Ph3, Ph2Py) and functionalized pyridine-based ligands have been studied with different techniques.
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Affiliation(s)
- Anastasia V. Chupina
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
- 630090 Novosibirsk
| | - Vladimir Shayapov
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
| | - Alexander S. Novikov
- Institute of Chemistry
- Saint Petersburg State University
- Saint Petersburg
- Russian Federation
| | | | | | - Pavel A. Abramov
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
- Lanzhou Institute of Chemical Physics
- CAS
| | - Maxim N. Sokolov
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
- 630090 Novosibirsk
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44
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Sharutin VV, Sharutina OK, Novikov AS, Adonin SA. Substituent-dependent reactivity of triarylantimony(iii) toward I2: isolation of [Ar3SbI]+ salt. NEW J CHEM 2020. [DOI: 10.1039/d0nj02774j] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The outcome of reactions of triarylantimony (Ar3Sb) with diiodine in benzene is strongly affected by the identity of the substituents.
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Affiliation(s)
| | | | - Alexander S. Novikov
- Saint Petersburg State University
- Institute of Chemistry
- 199034 Saint Petersburg
- Russia
| | - Sergey A. Adonin
- South Ural State University
- 454080 Chelyabinsk
- Russia
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
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45
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Eliseeva AA, Ivanov DM, Novikov AS, Rozhkov AV, Kornyakov IV, Dubovtsev AY, Kukushkin VY. Hexaiododiplatinate(ii) as a useful supramolecular synthon for halogen bond involving crystal engineering. Dalton Trans 2020; 49:356-367. [DOI: 10.1039/c9dt04221k] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
By performing combined XRD and theoretical studies, we established the modes of REWGI⋯I–Pt XBs with [Pt2(μ-I)2I4]2−acting as an XB acceptor.
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Affiliation(s)
- Anastasiya A. Eliseeva
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Daniil M. Ivanov
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Alexander S. Novikov
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Anton V. Rozhkov
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Ilya V. Kornyakov
- Institute of Earth Sciences
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Alexey Yu. Dubovtsev
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Vadim Yu. Kukushkin
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
- Institute of Macromolecular Compounds
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46
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Mikherdov AS, Katkova SA, Novikov AS, Efremova MM, Reutskaya EY, Kinzhalov MA. (Isocyano group)⋯lone pair interactions involving coordinated isocyanides: experimental, theoretical and CSD studies. CrystEngComm 2020. [DOI: 10.1039/c9ce01741k] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Both carbon and nitrogen centers in the coordinated isocyano group are capable of acting as a π-hole donor toward lone pairs.
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Affiliation(s)
| | | | | | - Mariia M. Efremova
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
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47
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Rozhkov AV, Ivanov DM, Novikov AS, Ananyev IV, Bokach NA, Kukushkin VY. Metal-involving halogen bond Ar–I⋯[dz2PtII] in a platinum acetylacetonate complex. CrystEngComm 2020. [DOI: 10.1039/c9ce01568j] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The observed and confirmed theoretically metal-involving halogen bond Ar–I⋯[dz2PtII] provides experimental evidence favoring a XB formation step upon oxidative addition of ArI to PtII.
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Affiliation(s)
- Anton V. Rozhkov
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Daniil M. Ivanov
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Alexander S. Novikov
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Ivan V. Ananyev
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
| | - Nadezhda A. Bokach
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
| | - Vadim Yu. Kukushkin
- Institute of Chemistry
- Saint Petersburg State University
- 199034 Saint Petersburg
- Russian Federation
- Institute of Macromolecular Compounds
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48
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Serebryanskaya TV, Kinzhalov MA, Bakulev V, Alekseev G, Andreeva A, Gushchin PV, Protas AV, Smirnov AS, Panikorovskii TL, Lippmann P, Ott I, Verbilo CM, Zuraev AV, Bunev AS, Boyarskiy VP, Kasyanenko NA. Water soluble palladium(ii) and platinum(ii) acyclic diaminocarbene complexes: solution behavior, DNA binding, and antiproliferative activity. NEW J CHEM 2020. [DOI: 10.1039/d0nj00060d] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Water soluble Pd(ii) and Pt(ii)–ADC species synthesized via the metal-mediated coupling of isocyanides and 1,2-diaminobenzene have demonstrated antitumor potential.
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Affiliation(s)
| | | | | | | | | | | | | | | | - Taras L. Panikorovskii
- Saint Petersburg State University
- St. Petersburg
- Russia
- Laboratory of Nature-Inspired Technologies and Environmental Safety of the Arctic
- Kola Science Centre
| | - Petra Lippmann
- Institute of Medicinal and Pharmaceutical Chemistry
- Technische Universität Braunschweig
- D-38106 Braunschweig
- Germany
| | - Ingo Ott
- Institute of Medicinal and Pharmaceutical Chemistry
- Technische Universität Braunschweig
- D-38106 Braunschweig
- Germany
| | - Cyril M. Verbilo
- Research Institute for Physical Chemical Problems
- Belarusian State University
- 220006 Minsk
- Belarus
| | - Alexander V. Zuraev
- Research Institute for Physical Chemical Problems
- Belarusian State University
- 220006 Minsk
- Belarus
| | - Alexander S. Bunev
- Medicinal Chemistry Center
- Togliatti State University
- 445020 Togliatti
- Russia
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49
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Usoltsev AN, Adonin SA, Novikov AS, Abramov PA, Sokolov MN, Fedin VP. Chlorotellurate(iv) supramolecular associates with “trapped” Br2: features of non-covalent halogen⋯halogen interactions in crystalline phases. CrystEngComm 2020. [DOI: 10.1039/c9ce01820d] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Reactions of chlorotellurates(iv) and Br2 afford formation of supramolecular complexes Cat2{[TeCl6](Br2)} (Cat = Me3N+ (1), PyH+ (2), 4-MePyH+ (3) and 1-MePy+ (4)) where dibromine fragments are “trapped” by [TeCl6]3−via Br⋯Cl halogen bonding.
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Affiliation(s)
- Andrey N. Usoltsev
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
| | - Sergey A. Adonin
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
- 630090 Novosibirsk
| | - Alexander S. Novikov
- Saint Petersburg State University
- Institute of Chemistry
- 199034 Saint Petersburg
- Russia
| | - Pavel A. Abramov
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
- 630090 Novosibirsk
| | - Maxim N. Sokolov
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
- 630090 Novosibirsk
| | - Vladimir P. Fedin
- Nikolaev Institute of Inorganic Chemistry SB RAS
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
- 630090 Novosibirsk
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50
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Kashina MV, Kinzhalov MA, Smirnov AS, Ivanov DM, Novikov AS, Kukushkin VY. Dihalomethanes as Bent Bifunctional XB/XB-Donating Building Blocks for Construction of Metal-involving Halogen Bonded Hexagons. Chem Asian J 2019; 14:3915-3920. [PMID: 31550070 DOI: 10.1002/asia.201901127] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Indexed: 12/20/2022]
Abstract
The dihalomethanes CH2 X2 (X=Cl, Br, I) were co-crystallized with the isocyanide complexes trans-[MXM 2 (CNC6 H4 -4-XC )2 ] (M=Pd, Pt; XM =Br, I; XC =F, Cl, Br) to give an extended series comprising 15 X-ray structures of isostructural adducts featuring 1D metal-involving hexagon-like arrays. In these structures, CH2 X2 behave as bent bifunctional XB/XB-donating building blocks, whereas trans-[MXM 2 (CNC6 H4 -4-XC )2 ] act as a linear XB/XB acceptors. Results of DFT calculations indicate that all XCH2 -X⋅⋅⋅XM -M contacts are typical noncovalent interactions with estimated strengths in the range of 1.3-3.2 kcal mol-1 . A CCDC search reveals that hexagon-like arrays are rather common but previously overlooked structural motives for adducts of trans-bis(halide) complexes and halomethanes.
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Affiliation(s)
- Maria V Kashina
- Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Mikhail A Kinzhalov
- Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Andrey S Smirnov
- Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Daniil M Ivanov
- Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Alexander S Novikov
- Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
| | - Vadim Yu Kukushkin
- Saint Petersburg State University, Universitetskaya Nab. 7/9, 199034, Saint Petersburg, Russian Federation
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