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Shafiq I, Khalid M, Asghar MA, Baby R, Braga AAC, Alshehri SM, Ahmed S. Influence of azacycle donor moieties on the photovoltaic properties of benzo[c][1,2,5]thiadiazole based organic systems: a DFT study. Sci Rep 2023; 13:14630. [PMID: 37670033 PMCID: PMC10480204 DOI: 10.1038/s41598-023-41679-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 08/30/2023] [Indexed: 09/07/2023] Open
Abstract
Fullerene free organic chromophores are widely utilized to improve the efficacy of photovoltaic materials. Herein, we designed D-π-A-π-D form chromophores (TAZD1-TAZD5) via end-capped redistribution of donor moieties by keeping the same π-bridge and central acceptor unit for organic solar cells (OSCs). To analyze the photovoltaic characteristics of these derivatives, DFT estimations were accomplished at B3LYP/6-311 G (d,p) functional. Different investigations like frontier molecular orbital (FMO), absorption spectra (UV-Vis), density of states (DOS), binding energy (Eb), open circuit voltage (Voc), and transition density matrix (TDMs) were performed to examine the optical, photophysical and electronic characteristics of afore-mentioned chromophores. A suitable band gap (∆E = 2.723-2.659 eV) with larger bathochromic shift (λmax = 554.218-543.261 nm in acetonitrile) was seen in TAZD1-TAZD5. An effective charge transference from donor to acceptor via spacer was observed by FMO analysis which further supported by DOS and TDM. Further, lower binding energy values also supported the higher exciton dissociation and greater CT in TAZD1-TAZD5. Among all the designed chromophores, TAZD5 exhibited the narrowest Egap (2.659 eV) and maximum red-shifted absorption in solvent as well as gas phase i.e. 554.218 nm and 533.219 nm, respectively which perhaps as a result of the phenothiazine-based donor group (MPT). In a nutshell, all the tailored chromophores can be considered as efficient compounds for promising OSCs with a good Voc response, interestingly, TAZD5 is found to be excellent chromophores as compared to all these designed compounds.
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Affiliation(s)
- Iqra Shafiq
- Institute of Chemistry, Khwaja Fareed University of Engineering & Information Technology, Rahim Yar Khan, 64200, Pakistan
- Centre for Theoretical and Computational Research, Khwaja Fareed University of Engineering & Information Technology, Rahim Yar Khan, 64200, Pakistan
| | - Muhammad Khalid
- Institute of Chemistry, Khwaja Fareed University of Engineering & Information Technology, Rahim Yar Khan, 64200, Pakistan.
- Centre for Theoretical and Computational Research, Khwaja Fareed University of Engineering & Information Technology, Rahim Yar Khan, 64200, Pakistan.
| | - Muhammad Adnan Asghar
- Department of Chemistry, Division of Science and Technology, University of Education Lahore, Lahore, Pakistan
| | - Rabia Baby
- Department of Education, Sukkur IBA University, Sukkur, 65200, Pakistan
| | - Ataualpa A C Braga
- Departamento de Qu´ımica Fundamental, Instituto de Qu´ımica, Universidade de Sao˜ Paulo, Av. Prof. Lineu Prestes, 748, Sao Paulo, 05508-000, Brazil
| | - Saad M Alshehri
- Department of Chemistry, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Sarfraz Ahmed
- Wellman Center for Photomedicine, Harvard Medical School, Massachusetts General Hospital, Boston, MA, 02114, USA
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2
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Arumugam A, Shanmugam R, Munusamy S, Muhammad S, Algarni H, Sekar M. Study of the Crystal Architecture, Optoelectronic Characteristics, and Nonlinear Optical Properties of 4-Amino Antipyrine Schiff Bases. ACS OMEGA 2023; 8:15168-15180. [PMID: 37151560 PMCID: PMC10157849 DOI: 10.1021/acsomega.2c08305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Accepted: 04/03/2023] [Indexed: 05/09/2023]
Abstract
Two Schiff bases, (E)-4-((2-chlorobenzylidene)amino)-1,5-dimethyl-2-phenyl-1,2-dihydro-3H-pyrazol-3-one (4AAPOCB) and (E)-4-((4-chlorobenzylidene)amino)-1,5-dimethyl-2-phenyl-1,2-dihydro-3H-pyrazol-3-one (4AAPPCB), have been synthesized and grown as single crystals. Single-crystal X-ray diffraction analysis was employed to determine the crystal structure of the compounds, and the results suggest that the compounds crystallized into an orthorhombic crystal system having P212121 and Pbca space groups, respectively. Further, the crystallinity of the compounds was analyzed by the PXRD technique. The UV-vis-NIR spectra of the compounds demonstrate excellent transmittance in the entire visible region. The lower cutoff wavelengths of the compounds were determined to be 338 and 333 nm, respectively; additionally, optical band gaps of the compounds found were 4.60 and 4.35 eV. FTIR and NMR (1H and 13C) spectral techniques were utilized to analyze the molecular structure of the compounds. The compounds emit photoluminescence with broad emission bands with centers at 401 and 418 nm. The thermal stability and phase transitions were assessed through thermogravimetric methods. The phase transition prior to melting was indicated by the endothermic event at around 190 °C in the DTA curves of both crystals, and the same was observed in the DSC curves. The second harmonic efficiencies of the powdered compounds I and II were found to be 3.52 and 1.13 times better than that of the standard reference KDP. The 4AAPOCB and 4AAPPCB compounds showed isotropic polarizability amplitudes of 46.02 × 10-24 and 46.52 × 10-24 esu, respectively. The calculation of linear polarizability and NLO second-order polarizability (β) along with other optical parameters was performed for optimized geometries. The nonzero amplitudes of the average β values for compounds 4AAPOCB and 4AAPPCB were found to be 14.74 × 10-30 and 8.10 × 10-30 esu, respectively, which show a decent potential of the synthesized molecules for NLO applications. The calculated β amplitudes were further explained based on calculated electronic parameters like molecular electrostatic potentials, frontier molecular orbitals, molecular orbital energies, transition energies, oscillator strengths, and unit spherical representation of NLO polarizability. The current analysis emphasizes the significance of synthesized compounds as prospective candidates for optical and NLO applications through the use of experiments and quantum computations.
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Affiliation(s)
- Amsaveni Arumugam
- Department
of Chemistry, Sri Ramakrishna Mission Vidyalaya
College of Arts and Science, Coimbatore 641 020, Tamil Nadu, India
| | - Ramesh Shanmugam
- Department
of Chemistry, Sri Ramakrishna Mission Vidyalaya
College of Arts and Science, Coimbatore 641 020, Tamil Nadu, India
- Department
of Chemistry, Adithya Institute of Technology, Coimbatore 641 107, Tamil Nadu, India
| | - Saravanabhavan Munusamy
- Department
of Chemistry, KPR Institute of Engineering
and Technology, Coimbatore 641407, Tamil Nadu, India
| | - Shabbir Muhammad
- Department
of Chemistry, College of Science, King Khalid
University, P.O. Box 9004, Abha 61413,Saudi Arabia
| | - Hamed Algarni
- Department
of Physics, College of Science, King Khalid
University, P.O. Box 9004, Abha 61413,Saudi Arabia
| | - Marimuthu Sekar
- Department
of Chemistry, Sri Ramakrishna Mission Vidyalaya
College of Arts and Science, Coimbatore 641 020, Tamil Nadu, India
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3
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Dongare G, Aswar A. Synthesis of new heterocyclic N'-(2-hydroxy-3-methoxybenzylidene)-4-oxopiperidine-1-carbohydrazide and its mononuclear metal (II) complexes: spectroscopic characterization, fluorescence, DFT, thermo-kinetic, and antimicrobial studies. J Mol Struct 2023. [DOI: 10.1016/j.molstruc.2023.135107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
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4
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Adjissi L, Chafai N, Benbouguerra K, Kirouani I, Hellal A, Layaida H, Elkolli M, Bensouici C, Chafaa S. Synthesis, characterization, DFT, antioxidant, antibacterial, pharmacokinetics and inhibition of SARS-CoV-2 main protease of some heterocyclic hydrazones. J Mol Struct 2022; 1270:134005. [PMID: 36033106 PMCID: PMC9395430 DOI: 10.1016/j.molstruc.2022.134005] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 08/05/2022] [Accepted: 08/22/2022] [Indexed: 02/04/2023]
Abstract
Three hydrazone derivatives have been synthesized using condensation reaction of 4-hydrazinylbenzoic acid with three aromatic aldehydes namely: thiophene-2-carbaldehyde, thiophene-3-carbaldehyde and 2-furaldehyde in ethanol at 78 °C reflux. The synthesized molecules have been characterized using spectroscopic and physicochemical methods including UV-Vis, IR, 1H NMR, 13C NMR, 15N NMR and melting point determination. Optimized molecular structures, UV-Vis and IR spectra modeling, the reactivity, the stability and some quantum chemical parameters of the synthesized molecules were modeled utilizing density functional theory (DFT). The obtained theoretical results were found in good agreement with the experimental results. On the other hand, the antioxidant and antibacterial activities of the molecules under study were evaluated to better understand the associated mechanisms of action specifically. Also, predicted ADME-T and pharmacokinetic parameters indicated that these compounds showed good oral bioavailability. Finally, molecular docking has been used to predict the inhibitory activity of the studied hydrazone derivatives on the SARS-CoV-2 main protease (Mpro).
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Affiliation(s)
- Lilia Adjissi
- Laboratory of Electrochemistry of Molecular Materials and Complex (LEMMC). Department of Process Engineering, Faculty of Technology, University of Ferhat ABBAS Setif-1, El-Mabouda campus, 19000 Sétif, Algeria
| | - Nadjib Chafai
- Laboratory of Electrochemistry of Molecular Materials and Complex (LEMMC). Department of Process Engineering, Faculty of Technology, University of Ferhat ABBAS Setif-1, El-Mabouda campus, 19000 Sétif, Algeria,Corresponding author
| | - Khalissa Benbouguerra
- Laboratory of Electrochemistry of Molecular Materials and Complex (LEMMC). Department of Process Engineering, Faculty of Technology, University of Ferhat ABBAS Setif-1, El-Mabouda campus, 19000 Sétif, Algeria
| | - Imene Kirouani
- Laboratory of Electrochemistry of Molecular Materials and Complex (LEMMC). Department of Process Engineering, Faculty of Technology, University of Ferhat ABBAS Setif-1, El-Mabouda campus, 19000 Sétif, Algeria
| | - Abdelkader Hellal
- Laboratory of Electrochemistry of Molecular Materials and Complex (LEMMC). Department of Process Engineering, Faculty of Technology, University of Ferhat ABBAS Setif-1, El-Mabouda campus, 19000 Sétif, Algeria
| | - Houdheifa Layaida
- Laboratory of Electrochemistry of Molecular Materials and Complex (LEMMC). Department of Process Engineering, Faculty of Technology, University of Ferhat ABBAS Setif-1, El-Mabouda campus, 19000 Sétif, Algeria
| | - Meriem Elkolli
- Laboratory of applied microbiology, Faculty of Natural and Life Sciences, University of Setif 1, Algeria
| | - Chawki Bensouici
- Centre de Recherche en Biotechnologie, Ali Mendjli, Nouvelle Ville UV 03, BP E73 Constantine, Algeria
| | - Salah Chafaa
- Laboratory of Electrochemistry of Molecular Materials and Complex (LEMMC). Department of Process Engineering, Faculty of Technology, University of Ferhat ABBAS Setif-1, El-Mabouda campus, 19000 Sétif, Algeria
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5
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Ali A, Ashfaq M, Din ZU, Ibrahim M, Khalid M, Assiri MA, Riaz A, Tahir MN, Rodrigues-Filho E, Imran M, Kuznetsov A. Synthesis, Structural, and Intriguing Electronic Properties of Symmetrical Bis-Aryl-α,β-Unsaturated Ketone Derivatives. ACS OMEGA 2022; 7:39294-39309. [PMID: 36340158 PMCID: PMC9631725 DOI: 10.1021/acsomega.2c05441] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Accepted: 10/10/2022] [Indexed: 06/16/2023]
Abstract
Three symmetrical bis-aryl-α,β-unsaturated ketone derivatives, 2,6-di((E)-benzylidene)-cyclohexan-1-one (DBC), 2,6-bis((E)-4-chlorobenzylidene)cyclohexan-1-one (BCC), and (1E,1'E,4E,4'E)-5,5'-(1,4-phenylene)bis(2-methyl-1-phenylpenta-1,4-dien-3-one) (PBMP), have been prepared using the aldol condensation approach toward ketones having two enolizable sites. The structures of DBC, BCC, and PBMP have been resolved via spectrometric methods. Moreover, the crystal structure of PBMP is determined by the single-crystal X-ray diffraction (SC-XRD) technique, which revealed that the PBMP molecular assembly is stabilized by the intermolecular C-H···O bonding and C-O···π and weak T-shaped offset π···π stacking interactions. The Hirshfeld surface analysis (HSA) of the PBMP crystal structure was performed as well, and the results were compared with the results of DBC and BCC. The density functional theory (DFT) study results revealed that the longer conjugated molecule of PBMP has smaller but still quite significant HOMO-LUMO gaps compared to the smaller molecules of BCC and DBC. The natural population analysis (NPA) and natural bonding orbital (NBO) analysis were performed. Accordingly, the hydrogen bonding and dipole-dipole interactions stabilize the crystal structures of these compounds. Additionally, the NBO analysis showed numerous high-energy stabilizing interactions for the PBMP compound due to the presence of numerous delocalized and relatively easily polarizable π-electrons, thus implying its significant thermodynamic stability. According to the global reactivity parameter (GRP) analysis, the compounds BCC and DBC are relatively stable in redox processes and have high thermodynamic stability and relatively lower reactivity in general. The molecular electrostatic potential (MEP) analysis results imply potential formation of the intermolecular hydrogen bonding and dispersion interactions, which stabilizes the crystal structures of these compounds.
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Affiliation(s)
- Akbar Ali
- Department
of Chemistry, Government College University, Faisalabad38040, Pakistan
| | - Muhammad Ashfaq
- Department
of Physics, University of Sargodha, Sargodha40100, Pakistan
| | - Zia Ud Din
- LaBioMMi,
Departamento de Química, Universidade
Federal de São Carlos, CP 676, 13.565-905São Carlos, SP, Brazil
| | - Muhammad Ibrahim
- Department
of Applied Chemistry, Government College
University, Faisalabad38040, Pakistan
| | - Muhammad Khalid
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan64200, Pakistan
| | - Mohammed A. Assiri
- Research
Center for Advanced Materials Science (RCAMS), King Khalid University, P. O. Box 9004, Abha61514, Saudi Arabia
- Department
of Chemistry, Faculty of Science, King Khalid
University, P.O. Box 9004, Abha61413, Saudi Arabia
| | - Arish Riaz
- Department
of Applied Chemistry, Government College
University, Faisalabad38040, Pakistan
| | | | - Edson Rodrigues-Filho
- LaBioMMi,
Departamento de Química, Universidade
Federal de São Carlos, CP 676, 13.565-905São Carlos, SP, Brazil
| | - Muhammad Imran
- Research
Center for Advanced Materials Science (RCAMS), King Khalid University, P. O. Box 9004, Abha61514, Saudi Arabia
- Department
of Chemistry, Faculty of Science, King Khalid
University, P.O. Box 9004, Abha61413, Saudi Arabia
| | - Aleksey Kuznetsov
- Departamento
de Química, Campus Santiago Vitacura, Universidad Técnica Federico Santa María, Av. Santa María 6400, Vitacura7660251, Chile
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6
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Ashfaq M, Ali A, Tahir MN, Kuznetsov A, Munawar KS, Muhammad S. Synthesis, single-crystal exploration, hirshfeld surface analysis, and DFT investigation of the thiosemicarbazones. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133088] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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7
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Ajaz K. Kirmani S, Ali P, Azam F, Kuznetsov A, Alvi P. Structure and electronic properties of the HA-CUR conjugate: an insight from the DFT perspective. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2022.113761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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8
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Malik AN, Kuznetsov A, Ali A, Ashfaq M, Tahir MN, Siddique A. Imine-based Zwitterion: Synthesis, single-crystal characterization, and computational investigation. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.132237] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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9
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Synthesis, structural, vibrational, molecular docking and nonlinear optical studies of (E)-N′-(2,3-dimethoxybenzylidene)-4-fluorobenzohydrazide. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132375] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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10
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Imran M, Khalid M, Jawaria R, Ali A, Asghar MA, Shafiq Z, Assiri MA, Lodhi HM, Braga AA. Exploration of Photophysical and Nonlinear Properties of Salicylaldehyde-Based Functionalized Materials: A Facile Synthetic and DFT Approach. ACS OMEGA 2021; 6:33914-33922. [PMID: 34926938 PMCID: PMC8674987 DOI: 10.1021/acsomega.1c04984] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/19/2021] [Accepted: 11/23/2021] [Indexed: 06/14/2023]
Abstract
The current research presents the synthesis of novel salicylaldehyde thiosemicarbazones (1-6) and their spectroscopic characterization employing UV-visible, Fourier transform infrared spectroscopy, and NMR techniques. Experimental results are compared and validated with the results obtained theoretically by employing density functional theory at the M06 level with the 6-311G (d,p) basis set. Further, various parameters [natural bond orbital (NBO)], linear and nonlinear optical (NLO) properties, and global reactivity parameters (GRPs) are computationally calculated. The NBO approach has confirmed the stability of compounds on account of charge delocalization and hyper conjugative interaction network. Frontier molecular orbital analysis has explained the charge transfer and chemical reactivity capability, while GRPs have led to the analysis of kinetic stability of the studied molecules. Further, the probability of being NLO-active has been theoretically proved by the HOMO/LUMO energy difference (4.133-4.186 eV) and β values (192.778-501.709 a.u). These findings suggest that the studied compounds possess potential NLO applications as they have shown larger NLO values in comparison with that of the urea molecule, and such distinct properties prove their technological importance.
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Affiliation(s)
- Muhammad Imran
- Department
of Chemistry, Faculty of Science, King Khalid
University, P.O. Box 9004, Abha 61413, Saudi Arabia
| | - Muhammad Khalid
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan
| | - Rifat Jawaria
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan
| | - Asif Ali
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan
| | - Muhammad Adnan Asghar
- Department
of Chemistry, Division of Science and Technology, University of Education, Lahore 54770, Pakistan
| | - Zahid Shafiq
- Institute
of Chemical Sciences, Bahauddin Zakariya
University, Multan 60800, Pakistan
| | - Mohammed A. Assiri
- Department
of Chemistry, Faculty of Science, King Khalid
University, P.O. Box 9004, Abha 61413, Saudi Arabia
| | - Hafiza Munazza Lodhi
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan
| | - Ataualpa Albert
Carmo Braga
- Departamento
de Química Fundamental, Instituto
de Química, Universidade de São Paulo, Avenida Professor LineuPrestes, 748, São Paulo 05508-000, Brazil
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Ali A, Kuznetsov A, Ashfaq M, Tahir MN, Khalid M, Imran M, Irfan A. Synthesis, single-crystal exploration, and theoretical insights of arylsulfonylated 2-amino-6-methylpyrimidin derivatives. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130789] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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12
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Concepcion O, Ali A, Khalid M, F. de la Torre A, Khan MU, Raza AR, Kamal GM, Rehman MF, Alam MM, Imran M, Braga AA, Pertino MW. Facile Synthesis of Diversely Functionalized Peptoids, Spectroscopic Characterization, and DFT-Based Nonlinear Optical Exploration. ACS OMEGA 2021; 6:26016-26025. [PMID: 34660963 PMCID: PMC8515372 DOI: 10.1021/acsomega.1c02962] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2021] [Indexed: 05/03/2023]
Abstract
Compounds having nonlinear optical (NLO) characteristics have been proved to have a significant role in many academic and industrial areas; particularly, their leading role in surface interfaces, solid physics, materials, medicine, chemical dynamics, nuclear science, and biophysics is worth mentioning. In the present study, novel peptoids (1-4) were prepared in good yields via Ugi four-component reaction (Ugi-4CR). In addition to synthetic studies, computational calculations were executed to estimate the molecular electrostatic potential, natural bond orbital (NBO), frontier molecular orbital analysis, and NLO properties. The NBO analysis confirmed the stability of studied systems owing to containing intramolecular hydrogen bonding and hyperconjugative interactions. NLO analysis showed that investigated molecules hold noteworthy NLO response as compared to standard compounds that show potential for technology-related applications.
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Affiliation(s)
- Odette Concepcion
- Departamento
de Química Orgánica, Facultad
de Ciencias Químicas, Universidad
de Concepción, Concepción 4030000, Chile
| | - Akbar Ali
- Department
of Chemistry, Government College University
Faisalabad, Faisalabad-38000, Pakistan
| | - Muhammad Khalid
- Department
of Chemistry, Khwaja Fareed University of
Engineering and Information Technology, Rahim Yar Khan 64200, Pakistan
| | - Alexander F. de la Torre
- Departamento
de Química Orgánica, Facultad
de Ciencias Químicas, Universidad
de Concepción, Concepción 4030000, Chile
| | | | - Abdul Rauf Raza
- Department
of Chemistry, University of Sargodha, Sargodha 40100, Pakistan
| | - Ghulam Mustafa Kamal
- Department
of Chemistry, Khwaja Fareed University of
Engineering and Information Technology, Rahim Yar Khan 64200, Pakistan
| | | | - Mohammed Mujahid Alam
- Department
of Chemistry, Faculty of Science, King Khalid
University, P. O. Box 9004, Abha 61413, Saudi Arabia
| | - Muhammad Imran
- Department
of Chemistry, Faculty of Science, King Khalid
University, P. O. Box 9004, Abha 61413, Saudi Arabia
| | - Ataualpa Albert
Carmo Braga
- Departamento
de Química Fundamental, Instituto de Química, Universidade de São Paulo, Avenida Professor LineuPrestes, 748, São Paulo 05508-000, Brazil
| | - Mariano W. Pertino
- Institute
of Natural Resources Chemistry, Universidad
de Talca, Casilla 747, Avenida Lircay, Talca P.C. 3462227, Chile
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13
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Turgut E, Gungor O, Kirpik H, Kose A, Gungor SA, Kose M. Benzimidazole ligands with allyl, propargyl or allene groups, DNA binding properties, and molecular docking studies. Appl Organomet Chem 2021. [DOI: 10.1002/aoc.6323] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Enes Turgut
- Chemistry Department Kahramanmaras Sutcu Imam University Kahramanmaras Turkey
| | - Ozge Gungor
- Chemistry Department Kahramanmaras Sutcu Imam University Kahramanmaras Turkey
| | - Hilal Kirpik
- Chemistry Department Kahramanmaras Sutcu Imam University Kahramanmaras Turkey
| | - Ayşegül Kose
- Bioengineering and Sciences Kahramanmaras Sutcu Imam University Kahramanmaras Turkey
- Department of Property Protection and Safety, Elbistan Vocational School Istiklal University Kahramanmaras Turkey
| | - Seyit Ali Gungor
- Chemistry Department Kahramanmaras Sutcu Imam University Kahramanmaras Turkey
| | - Muhammet Kose
- Chemistry Department Kahramanmaras Sutcu Imam University Kahramanmaras Turkey
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14
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Haroon M, Akhtar T, Khalid M, Ali S, Zahra S, Ul Haq I, Alhujaily M, C H de B Dias M, Cristina Lima Leite A, Muhammad S. Synthesis, antioxidant, antimicrobial and antiviral docking studies of ethyl 2-(2-(arylidene)hydrazinyl)thiazole-4-carboxylates. ACTA ACUST UNITED AC 2021; 76:467-480. [PMID: 33901389 DOI: 10.1515/znc-2021-0042] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Accepted: 04/09/2021] [Indexed: 11/15/2022]
Abstract
A series of ethyl 2-(2-(arylidene)hydrazinyl)thiazole-4-carboxylates (2a-r) was synthesized in two steps from thiosemicarbazones (1a-r), which were cyclized with ethyl bromopyruvate to ethyl 2-(2-(arylidene)hydrazinyl)thiazole-4-carboxylates (2a-r). The structures of compounds (2a-r) were established by FT-IR, 1H- and 13C-NMR. The structure of compound 2a was confirmed by HRMS. The compounds (2a-r) were then evaluated for their antimicrobial and antioxidant assays. The antioxidant studies revealed, ethyl 2-(2-(4-hydroxy-3-methoxybenzylidene)hydrazinyl)thiazole-4-carboxylate (2g) and ethyl 2-(2-(1-phenylethylidene)hydrazinyl)thiazole-4-carboxylate (2h) as promising antioxidant agents with %FRSA: 84.46 ± 0.13 and 74.50 ± 0.37, TAC: 269.08 ± 0.92 and 269.11 ± 0.61 and TRP: 272.34 ± 0.87 and 231.11 ± 0.67 μg AAE/mg dry weight of compound. Beside bioactivities, density functional theory (DFT) methods were used to study the electronic structure and properties of synthesized compounds (2a-m). The potential of synthesized compounds for possible antiviral targets is also predicted through molecular docking methods. The compounds 2e and 2h showed good binding affinities and inhibition constants to be considered as therapeutic target for Mpro protein of SARS-CoV-2 (COVID-19). The present in-depth analysis of synthesized compounds will put them under the spot light for practical applications as antioxidants and the modification in structural motif may open the way for COVID-19 drug.
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Affiliation(s)
- Muhammad Haroon
- Department of Chemistry, Mirpur University of Science and Technology (MUST), 10250Mirpur, AJK, Pakistan
| | - Tashfeen Akhtar
- Department of Chemistry, Mirpur University of Science and Technology (MUST), 10250Mirpur, AJK, Pakistan
| | - Muhammad Khalid
- Department of Chemistry, Khwaja Fareed University of Engineering & Information Technology, Rahim Yar Khan, 64200, Pakistan
| | - Shehbaz Ali
- Department of Biosciences and Technology, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan, Punjab, Pakistan
| | - Saniya Zahra
- Department of Pharmacy, Quaid-i-Azam University, Islamabad, Pakistan
| | - Ihsan Ul Haq
- Department of Pharmacy, Quaid-i-Azam University, Islamabad, Pakistan
| | - Muhanad Alhujaily
- Department of Clinical Laboratory, College of Applied Medicine, University of Bisha, Bisha, 61922, P.O. Box 551Saudi Arabia
| | - Mabilly C H de B Dias
- Departamento de Ciências Farmacêuticas, Centro de Ciências da Saúde, Universidade Federal de Pernambuco, 50740-520, Recife, PE, Brazil
| | - Ana Cristina Lima Leite
- Departamento de Ciências Farmacêuticas, Centro de Ciências da Saúde, Universidade Federal de Pernambuco, 50740-520, Recife, PE, Brazil
| | - Shabbir Muhammad
- Department of Physics, College of Science, King Khalid University, P.O. Box 9004, Abha61413, Saudi Arabia
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15
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2-Amino-6-methylpyridine based co-crystal salt formation using succinic acid: Single-crystal analysis and computational exploration. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.129893] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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16
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Theoretical Investigation of Jack-in-the-Box Electro-Optical Compounds: In-Silico Design of Mixed-Argon Benzonitriles Towards the Template of Clusters. J CLUST SCI 2021. [DOI: 10.1007/s10876-021-02052-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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17
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Ashfaq M, Ali A, Kuznetsov A, Tahir MN, Khalid M. DFT and single-crystal investigation of the pyrimethamine-based novel co-crystal salt: 2,4-diamino-5-(4-chlorophenyl)-6-ethylpyrimidin-1-ium-4-methylbenzoate hydrate (1:1:1) (DEMH). J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129445] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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18
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Janjua MRSA, Mahmood R, Haroon M, Anwar F, Khan MU, Ullah N. In Silico Modelling of Viscoelastic Surfactants: Towards NLO Response and Novel Physical Insights through Bridging Acceptor. J CLUST SCI 2021. [DOI: 10.1007/s10876-021-01997-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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19
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Khan S, Tariq M, Ashraf M, Abdullah S, al-Rashida M, Khalid M, Taslimi P, Fatima M, Zafar R, Shafiq Z. Probing 2-acetylbenzofuran hydrazones and their metal complexes as α-glucosidase inhibitors. Bioorg Chem 2020; 102:104082. [DOI: 10.1016/j.bioorg.2020.104082] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 07/04/2020] [Accepted: 07/06/2020] [Indexed: 12/27/2022]
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20
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Ali A, Khalid M, Rehman MFU, Haq S, Ali A, Tahir MN, Ashfaq M, Rasool F, Braga AA. Efficient Synthesis, SC-XRD, and Theoretical Studies of O-Benzenesulfonylated Pyrimidines: Role of Noncovalent Interaction Influence in Their Supramolecular Network. ACS OMEGA 2020; 5:15115-15128. [PMID: 32637784 PMCID: PMC7331070 DOI: 10.1021/acsomega.0c00975] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Accepted: 06/04/2020] [Indexed: 05/29/2023]
Abstract
Crystalline organic compounds, 2-amino-6-methylpyrimidin-4-yl benzenesulfonate (AMPBS) and 2,6-diaminopyrimidin-4-yl benzenesulfonate (DAPBS), were prepared via O-benzenesulfonylation of 2-amino-6-methylpyrimidin-4-ol 1 and 2,6-diaminopyrimidin-4-ol 2, respectively. The structural interpretations were achieved unambiguously by single-crystal X-ray diffraction (SC-XRD) analysis. The Hirshfeld surface study showed that C-H···O, N-H···N, and especially C-H···C hydrogen bond interactions are the key contributors to the intermolecular stabilization in the crystal. Density functional theory (DFT) studies were used to obtain a better understanding of natural bond orbitals (NBOs) and nonlinear optical (NLO) analysis for AMPBS and DAPBS at the B3LYP/6-311G(d,p) level. The time-dependent density functional theory (TD-DFT)/CAM-B3LYP/6-311G(d,p) level was employed for frontier molecular orbital analysis of both compounds. DFT-based vibrations for C-H, C=N, N-H, and stretching for C-C were found to be in good agreement with the experimental data. Overall, the theoretical findings were acquired in correspondence to the SC-XRD-based parameters. Intracharge transfer occurred in AMPBS and DAPBS compounds, which was evaluated through FMO activity. Global reactivity indices had been acquired utilizing energies of HOMO-LUMO orbitals. Overall, the theoretical findings related to AMPBS and DAPBS consist of promising correspondence to experimental findings. The theoretical-based study also exhibited that both AMPBS and DAPBS compounds contain promising NLO features.
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Affiliation(s)
- Akbar Ali
- Department
of Chemistry, University of Sargodha, Sargodha 40100, Pakistan
| | - Muhammad Khalid
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan
| | | | - Sadia Haq
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan
| | - Arif Ali
- Department
of Physics, University of Sargodha, Sargodha 40100, Pakistan
| | | | - Muhammad Ashfaq
- Department
of Physics, University of Sargodha, Sargodha 40100, Pakistan
| | - Faiz Rasool
- Department
of Chemistry, Khwaja Fareed University of
Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan
| | - Ataualpa Albert
Carmo Braga
- Departamento
de Química Fundamental, Instituto de Química, Universidade de São Paulo, Avenida Professor Lineu Prestes, 748, São Paulo 05508-000, Brazil
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21
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Khalid M, Ali A, Rehman MFU, Mustaqeem M, Ali S, Khan MU, Asim S, Ahmad N, Saleem M. Exploration of Noncovalent Interactions, Chemical Reactivity, and Nonlinear Optical Properties of Piperidone Derivatives: A Concise Theoretical Approach. ACS OMEGA 2020; 5:13236-13249. [PMID: 32548510 PMCID: PMC7288701 DOI: 10.1021/acsomega.0c01273] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2020] [Accepted: 05/14/2020] [Indexed: 05/05/2023]
Abstract
The organic compounds with a π-bond system lead to electric charge delocalization which enables them to reveal fascinating nonlinear optical properties. Mono-carbonyl curcuminoids also have an appealing skeleton from the conjugation view point. Interesting chemical structures of the 3,5-bis(arylidene)-N-benzenesulfonyl-4-piperidone derivatives motivated us to perform density functional theory (DFT)-based studies. Therefore, computations using the B3LYP/6-311G(d,p) functional of DFT were executed to explore geometric parameters, highest occupied molecular orbital (HOMO)-lowest unoccupied molecular orbital (LUMO) energies, and natural bond orbital (NBO) analyses. Moreover, three different functionals such as HF, B3LYP, and M06 with the 6-311G(d,p) basis set were used to investigate the average polarizability ⟨α⟩ and first hyperpolarizability (βtot)-based properties of all compounds. A good concurrence among calculated and experimental parameters was obtained through root mean square error calculations. The molecular stability of piperidone derivatives was examined using the Hirshfeld surface and NBO analyses. Natural population analysis was also performed to obtain insights about atomic charges. Calculated HOMO-LUMO energies showed that charge transfer interactions take place within the molecules. Moreover, global reactivity parameters including electronegativity, chemical hardness, softness, ionization potential, and electrophilicity were calculated using the HOMO and LUMO energies. The average polarizability ⟨α⟩ and first hyperpolarizability (βtot) values of all compounds were observed to be larger in magnitude at the aforesaid functional than the standard compound.
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Affiliation(s)
- Muhammad Khalid
- Department of Chemistry, Khwaja Fareed University of Engineering & Information
Technology, Rahim Yar Khan 64200, Pakistan
| | - Akbar Ali
- Department
of Chemistry, University of Sargodha, Sargodha 40100, Pakistan
| | | | - Muhammad Mustaqeem
- Department of Chemistry, University of Sargodha Bhakkar Campus, Bhakkar 30000, Pakistan
| | - Shehbaz Ali
- Department of Chemistry, Khwaja Fareed University of Engineering & Information
Technology, Rahim Yar Khan 64200, Pakistan
| | | | - Sumreen Asim
- Department of Chemistry, Khwaja Fareed University of Engineering & Information
Technology, Rahim Yar Khan 64200, Pakistan
| | - Naseeb Ahmad
- Department of Physics, Khwaja Fareed University of Engineering & Information
Technology, Rahim Yar Khan 64200, Pakistan
| | - Muhammad Saleem
- Department of Physics, Khwaja Fareed University of Engineering & Information
Technology, Rahim Yar Khan 64200, Pakistan
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22
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Zia M, Khalid M, Hameed S, Irran E, Naseer MM. Synthesis and solid state self-assembly of a 1,4-diazepine derivative: Water cluster as molecular glue and conformational isomerism. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.127811] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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23
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Raza AR, Nisar B, Khalid M, Gondal HY, Khan MU, de Alcântara Morais SF, Tahir MN, Braga AAC. A facile microwave assisted synthesis and structure elucidation of (3R)-3-alkyl-4,1-benzoxazepine-2,5-diones by crystallographic, spectroscopic and DFT studies. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 230:117995. [PMID: 31958608 DOI: 10.1016/j.saa.2019.117995] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 12/21/2019] [Accepted: 12/25/2019] [Indexed: 05/18/2023]
Abstract
The use of microwave (MW) irradiation in organic synthesis has become increasingly popular within the pharmaceutical and academic arenas because it is a new enabling technology for drug discovery and development. It is a rapid way of synthesis, which involves faster reaction rates and high selectivity to conventional heating method of syntheses. The MW-assisted 7-exo-tet cyclization of N-acylanthranilic acids afforded (3R)-3-alkyl-4,1-benzoxazepines-2,5-diones in very short duration (20 min) with extraordinary high yields in comparison to conventional heating mode of synthesis. The method development, comparative yields of MW-assisted and thermal method of syntheses, crystallographic, spectroscopic and density functional theory (DFT) studies are reported herein. Four novel compounds with chemical formulas C10H9BrClNO35m, C19H19NO36e, C13H14ClNO36h and C12H11Br2NO36h were synthesized, validated by 1HNMR, 13CNMR, FT-IR, UVVis, EIMS spectroscopic techniques and confirmed by using single crystal X-ray diffraction (SC-XRD) study. The DFT and TDDFT calculations at B3LYP/6-311 + G(d,p) level of theory were performed for comparative analysis of spectroscopic data, optimized geometries, frontier molecular orbitals (FMOs), natural bond orbital (NBO) analysis and nonlinear optical (NLO) properties of 5m, 6e, 6h and 6o. Overall, experimental findings were supported nicely by corresponding DFT computed results. The NBO analysis confirmed that the presence of non-covalent interactions, hydrogen bonding and hyper- conjugative interactions are pivotal cause for the existence of 5m, 6e, 6h and 6o in the solid-state. NLO analysis showed that 5m, 6e, 6h and 6o have significant NLO properties as compared to prototype standard compound which disclosed their potential for technology related applications.
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Affiliation(s)
- Abdul Rauf Raza
- Ibn-e-Sina Block, Department of Chemistry, University of Sargodha, Sargodha 40100, Pakistan.
| | - Bushra Nisar
- Department of Chemistry, The University of Lahore, Sargodha Campus, Sargodha 40100, Pakistan
| | - Muhammad Khalid
- Department of Chemistry, Khwaja Fareed University of Engineering & Information Technology, Rahim Yar Khan 64200, Pakistan.
| | - Humaira Yasmeen Gondal
- Ibn-e-Sina Block, Department of Chemistry, University of Sargodha, Sargodha 40100, Pakistan
| | | | - Sara Figueirêdo de Alcântara Morais
- Departamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, Avenida Professor Lineu Prestes, 748, São Paulo 05508-000, Brazil
| | - Muhammad Nawaz Tahir
- Ibn-ul-Hathim Block, Department of Physics, University of Sargodha, Sargodha 40100, Pakistan
| | - Ataualpa Albert Carmo Braga
- Departamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, Avenida Professor Lineu Prestes, 748, São Paulo 05508-000, Brazil
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24
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Synthesis and structural analysis of novel indole derivatives by XRD, spectroscopic and DFT studies. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127438] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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25
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Synthesis, crystal structure, spectroscopic, electronic and nonlinear optical properties of potent thiazole based derivatives: Joint experimental and computational insight. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127354] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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26
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Sales TA, Ramalho TC. Computational design of synthetic receptors for drug detection: interaction between molecularly imprinted polymers and MDMA (3,4-methylenedioxymethamphetamine). Theor Chem Acc 2020. [DOI: 10.1007/s00214-020-2543-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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27
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Khan B, Khalid M, Shah MR, Tahir MN, Asif HM, Rahnamaye Aliabad HA, Hussain A. Synthetic, spectroscopic, SC-XRD and nonlinear optical analysis of potent hydrazide derivatives: A comparative experimental and DFT/TD-DFT exploration. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127140] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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