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Almulhim N, Abd El-Lateef HM, Gouda M, Khalaf MM, Abdou A. Fe(III) and Ni(II) imidazole-benzimidazole mixed-ligand complexes: synthesis, structural characterization, molecular docking, DFT studies, and evaluation of antimicrobial and anti-inflammatory activities. Dalton Trans 2025. [PMID: 40336279 DOI: 10.1039/d5dt00551e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/09/2025]
Abstract
This work delves into the synthesis, characterization, and bioactivity of new metal complexes of imidazole (IM)-based and benzimidazole (BZ)-based ligands with Fe(III) and Ni(II) ions. Broad characterization techniques, including elemental analysis, IR spectroscopy, magnetic moment measurement, electronic spectral analysis, mass spectrometry, thermal analysis, and DFT calculations, confirmed the successful preparation of the complexes with a 1 : 1 : 1 (M : IM : BZ) stoichiometry. The NiBZI M and FeBZIM complexes possessed octahedral geometry, with one and two water molecules coordinated with Fe(III) and Ni(II), respectively. DFT calculations demonstrated that the reduction of the energy gap and increase in softness for the metal complexes resulted from metal coordination, enhancing the reactivity and biological activity of the complexes. The FeBZIM and NiBZIM complexes exhibited strong antimicrobial activity, with both complexes displaying improved efficacy towards Gram-positive and Gram-negative bacteria compared with their corresponding free ligands. Their activities were comparable to the standard antibiotic chloramphenicol. Furthermore, these complexes exhibited good antifungal activity towards Aspergillus niger and Candida albicans, surpassing that of the free ligands. MIC values also ensured enhanced antimicrobial activity of the metal complexes. Other than these properties, the complexes demonstrated significant anti-inflammatory activity, where the FeBZIM complex exhibited the highest activity, with an IC50 value closer to that of the reference drug. Molecular docking studies on the E. coli FabH-CoA complex (PDB ID: 1HNJ) and human cyclooxygenase-2 (COX-2) (PDB ID: 5IKT) revealed that the FeBZIM complex exhibited the highest binding affinity with the formation of several hydrogen bonds with key amino acid residues, suggesting a favorable antibacterial activity. Overall, the newly synthesized FeBZIM and NiBZIM complexes demonstrated immense potential as novel antimicrobial and anti-inflammatory drugs with enhanced efficacy compared with their free ligands.
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Affiliation(s)
- Nourah Almulhim
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia.
| | - Hany M Abd El-Lateef
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia.
| | - Mohamed Gouda
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia.
| | - Mai M Khalaf
- Department of Chemistry, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia.
| | - Aly Abdou
- Department of Chemistry, Faculty of Science, Sohag University, Sohag 82524, Egypt.
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Roy I, Mathur S, Deb S, Rathnam SSV, Tuti N, Shaji UP, L K, Roy A, Maji S. Benzimidazole-based mononuclear polypyridyl Cu(II) complexes: DNA binding, cleavage, and in vitro antiproliferative studies. Dalton Trans 2025; 54:6386-6401. [PMID: 40062962 DOI: 10.1039/d4dt03379e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2025]
Abstract
This paper addresses the synthesis, characterization, DNA binding, cleavage, and in vitro antiproliferative activity studies of a series of heteroleptic mononuclear copper(II) complexes [Cu(L)(bpy)](ClO4)2, {1}; [Cu(L)(phen)](ClO4)2, {2}; and [Cu(L)(Mephen)](ClO4)2, {3} derived from different polypyridyl ligands, where in the complex architecture, one 2,6-bis(1-methyl-1H-benzo[d]imidazol-2-yl)pyridine(Mebzimpy) (L) moiety is connected to the central Cu metal in a tridentate fashion and the bidentate co-ligands are 2,2'-bipyridine (bpy), 1,10-phenanthroline (phen) and 2,9-dimethyl-1,10-phenanthroline (Mephen). All the synthesized complexes were characterized using various spectroscopic and analytical methods, along with the single-crystal X-ray diffraction (SCXRD) technique. The complexes crystallize in a penta-coordinated distorted square pyramidal geometry. The redox properties of the complexes were also studied by using cyclic voltammetry (CV) and differential pulse voltammetry (DPV). The DNA binding nature of the complexes was investigated utilizing absorbance spectral measurement and fluorescence quenching experiments with ethidium bromide (EB) as a DNA intercalator, employing double-stranded salmon sperm DNA (ss-DNA). Both the binding constant (Kb) and the Stern-Volmer constant (KSV) were found to be in the order of 104. In silico molecular docking analysis confirmed that all the complexes could interact with the minor groove of duplex DNA. The DNA cleaving ability of the complexes was studied by gel electrophoresis using supercoiled plasmid DNA; however, no DNA cleavage was found. DNA-binding polypyridyl complexes are well known to disrupt DNA metabolic pathways and cause cytotoxicity to rapidly growing cancer cells. Hence, cell viability analysis was also carried out with complexes 1-3. It was observed that complexes 2 and 3 prevented the proliferation of the human osteosarcoma cell line U2OS and the triple-negative breast cancer cell line MDA-MB-231. Overall, these findings could be beneficial in the design and development of future antitumor agents.
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Affiliation(s)
- Indrajit Roy
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, Sangareddy 502284, Telangana, India.
| | - Shobhit Mathur
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, Sangareddy 502284, Telangana, India.
| | - Sourav Deb
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, Sangareddy 502284, Telangana, India.
| | | | - Nikhil Tuti
- Department of Biotechnology, Indian Institute of Technology, Hyderabad, Kandi, Sangareddy 502284, Telangana, India
| | | | - Karthikeyan L
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, Sangareddy 502284, Telangana, India.
| | - Anindya Roy
- Department of Biotechnology, Indian Institute of Technology, Hyderabad, Kandi, Sangareddy 502284, Telangana, India
| | - Somnath Maji
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, Sangareddy 502284, Telangana, India.
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Santoso SP, Angkawijaya AE, Cheng KC, Lin SP, Hsu HY, Hsieh CW, Rahmawati A, Shimomura O, Ismadji S. Unlocking the Potential of Gallic Acid-Based Metal Phenolic Networks for Innovative Adsorbent Design. Molecules 2025; 30:1218. [PMID: 40141997 PMCID: PMC11945622 DOI: 10.3390/molecules30061218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2025] [Revised: 02/28/2025] [Accepted: 03/03/2025] [Indexed: 03/28/2025] Open
Abstract
Metal phenolic networks (MPNs) have attracted significant attention due to their environmentally benign nature, broad compatibility, and universal adhesive properties, making them highly effective for modifying adsorbent surfaces. These supramolecular complexes are formed through the coordination of metal ions with natural phenolic ligands, resulting in stable structures while retaining the active adsorption sites of the ligands, thereby enhancing the adsorption performance of unmodified substrates. Among various MPNs, metal ion gallic acid (GA) networks are particularly well-known for their exceptional stability, biological activity, and superior adsorption ability. This review offers a comprehensive examination of GA-based MPN adsorbents, focusing on their formation chemistry, characterization techniques, and applications. The coordination chemistry underlying the stability of GA-metal complexes is analyzed through equilibrium studies, which are critical for understanding the robustness of MPNs. The main analytical methods for assessing metal ligand interactions are discussed, along with additional characterization techniques for evaluating adsorbent properties. This review also explores various synthesis and performance enhancement strategies for GA-based MPN adsorbents, including stand-alone MPNs, MPN-mediated mesoporous materials, MPN-MOF composites, and MPN-coated substrates. By consolidating current advancements in MPN-based adsorbents and offering fundamental insights into their chemistry and characterization, this review serves as a valuable resource for researchers seeking to develop stable, functional metal-organic materials. It aims to drive innovation in sustainable and efficient adsorbent technologies for diverse environmental and industrial applications.
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Affiliation(s)
- Shella Permatasari Santoso
- Chemical Engineering Department, Faculty of Engineering, Universitas Katolik Widya Mandala Surabaya, Jl. Kalijudan 37, Surabaya 60114, East Java, Indonesia;
- Chemical Engineering Master Program, Widya Mandala Surabaya Catholic University, Kalijudan 37, Surabaya 60114, East Java, Indonesia
- Collaborative Research Center for Zero Waste and Sustainability, Jl. Kalijudan 37, Surabaya 60114, East Java, Indonesia
| | | | - Kuan-Chen Cheng
- Institute of Biotechnology, National Taiwan University, #1 Roosevelt Rd., Sec. 4, Taipei 10617, Taiwan;
- Department of Optometry, Asia University, 500, Lioufeng Rd., Wufeng, Taichung 41354, Taiwan
- Graduate Institute of Food Science and Technology, National Taiwan University, 1 Roosevelt Rd., Sec. 4, Taipei 10617, Taiwan
- Department of Medical Research, China Medical University Hospital, China Medical University, 91 Hsueh-Shih Rd., Taichung 40402, Taiwan
| | - Shin-Ping Lin
- School of Food Safety, Taipei Medical University, 250 Wu-Hsing Street, Taipei 11031, Taiwan;
- TMU Research Center for Digestive Medicine, Taipei Medical University, 250 Wu-Hsing Street, Taipei 11031, Taiwan
- Research Center of Biomedical Device, Taipei Medical University, 250 Wu-Hsing Street, Taipei 11031, Taiwan
| | - Hsien-Yi Hsu
- School of Energy and Environment, Department of Materials Science and Engineering, Centre for Functional Photonics (CFP), City University of Hong Kong, Kowloon Tong, Hong Kong, China;
- Shenzhen Research Institute of City University of Hong Kong, Shenzhen 518057, China
| | - Chang-Wei Hsieh
- Department of Food Science and Biotechnology, National Chung Hsing University, 145 Xingda Rd., South Dist., Taichung 40227, Taiwan;
| | - Astrid Rahmawati
- Department of Applied Chemistry, Osaka Institute of Technology, 5-16-1 Omiya, Ashahi-ku, Osaka 535-8585, Japan; (A.R.); (O.S.)
| | - Osamu Shimomura
- Department of Applied Chemistry, Osaka Institute of Technology, 5-16-1 Omiya, Ashahi-ku, Osaka 535-8585, Japan; (A.R.); (O.S.)
| | - Suryadi Ismadji
- Chemical Engineering Department, Faculty of Engineering, Universitas Katolik Widya Mandala Surabaya, Jl. Kalijudan 37, Surabaya 60114, East Java, Indonesia;
- Chemical Engineering Master Program, Widya Mandala Surabaya Catholic University, Kalijudan 37, Surabaya 60114, East Java, Indonesia
- Collaborative Research Center for Zero Waste and Sustainability, Jl. Kalijudan 37, Surabaya 60114, East Java, Indonesia
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Bal M, Köse A, Güngör SA. Investigation of photoluminescence and DNA binding properties of benzimidazole compounds containing benzophenone group. J Biomol Struct Dyn 2024; 42:7847-7859. [PMID: 37526238 DOI: 10.1080/07391102.2023.2242496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 07/23/2023] [Indexed: 08/02/2023]
Abstract
The synthesis of benzimidazole compounds containing benzophenone group in accordance with the literature and the investigation of DNA binding properties of these compounds by using UV-vis and photoluminescence spectroscopy methods constitute the basis of this research. The structures of the compounds were determined by methods such as FT-IR, 1H, 13C NMR, UV-vis, Photoluminescence spectroscopy, and X-ray crystallography. By using methods such as UV-vis, Photoluminescence spectroscopy, and viscosity tests, information were collected about the binding types, binding mode, and binding energies of the compounds with DNA. In addition, the binding interactions of the compounds with DNA were investigated using the molecular docking technique. Using this information, calibration equations, correlation coefficients (r2), and DNA binding constants (Kb) were calculated for their compounds. The binding constants (Kb) calculated for substances A, B, and C were found to be 3.0 × 104, 7.0 × 104, and 3.0 × 104 M-1, respectively. UV-vis, EB competitive binding, and viscosity tests showed that the compounds tended to bind to the DNA structure via the groove binding mode. At the end of molecular docking studies, it was determined that compound B showed the best DNA binding activity in in vitro studies. Compared with the studies in the literature, it is thought that the synthesized compounds can take place in cancer drug research as DNA binding agents.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Mustafa Bal
- Department of Materials Science and Engineering, Kahramanmaras Sütcü Imam University, Kahramanmaraş, Turkey
| | - Ayşegül Köse
- Department of Property Protection and Safety, Elbistan Vocational School, Kahramanmaras Istiklal University, Kahramanmaraş, Turkey
| | - Seyit Ali Güngör
- Department of Chemistry, Faculty of Science, Kahramanmaras Sütcü Imam University, Kahramanmaraş, Turkey
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Kose A, Erkan S, Tümer M. A series of phenanthroline-imine compounds: Computational, OLED properties and fluorimetric sensing of nitroaromatic compounds. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 286:122006. [PMID: 36283207 DOI: 10.1016/j.saa.2022.122006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Revised: 10/10/2022] [Accepted: 10/14/2022] [Indexed: 06/16/2023]
Abstract
In this study, Schiff base compounds (1-5) were synthesized by the reaction of 5-amino-1,10-phenanthroline with various aldehydes. The molecular structures of the synthesized compounds were characterized by FT-IR, 1H/13C NMR and mass spectroscopic methods. Single crystals of 1 were obtained and their molecular structures in crystalline form were determined by single crystal X-ray diffraction study. The sensor properties of the synthesized compounds against nitroaromatic compounds [nitrobenzene (NB), 4-nitrophenol (NP), 2,4-dintrophenol (DNP) and 1,3,5-trinitrophenol (TNP)] were investigated by fluorescence spectroscopy. Compound 3 have highest sensitivity for the sensing of 1,3,5-trinitrophenol (TNP) (Ksv: 4.63 × 104 M-1) with LOD of 4.01 µM while compound 5 showed the highest sensitivity for 2,4-dinitrophenol (DNP) (Ksv: 5.71 × 104 M-1) with LOD of 4.75 µM. In addition, the structural parameters (bond angles/lengths), contour diagrams of HOMO/LUMO molecular orbitals, molecular electrostatic potential (MEP) maps, non-linear optical (NLO) and OLED properties were investigated by computational studies. According to the HOMO and LUMO energies, the NLO property of the molecule (5) is higher than both other molecules and the reference substance urea.
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Affiliation(s)
- Ayşegül Kose
- Department of Property Protection and Safety, Elbistan Vocational School, Istiklal University, Kahramanmaras, Turkey.
| | - Sultan Erkan
- Chemistry Department, Cumhuriyet University, Sivas 58140, Turkey
| | - Mehmet Tümer
- Chemistry Department, Kahramanmaras Sutcu Imam University, Kahramanmaras, Turkey
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Köse A, Bal M. SYNTHESIS, STRUCTURE AND PHOTOLUMINESCENCE PROPERTIES OF A Cd2+ COMPLEX OF A PYRIDINE-BIS-BENZIMIDAZOLE LIGAND. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622120095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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Das R, Mondal M, Paul S, Pan A, Banerjee P. An Easy-to-use phosphate triggered Zinc-Azophenine Complex assisted metal extrusion assay: A diagnostic approach for chronic kidney disease and in silico docking studies. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.121364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Köse A, Güngör Ö, Ballı JN, Erkan S. Synthesis, characterization, non-linear optical and DNA binding properties of a Schiff base ligand and its Cu(II) and Zn(II) complexes. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
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Synthesis, structural characterization and DNA binding properties of phthalazinylhydrazone-furan and triazolophthalazine-ferrocene compounds. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.134471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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