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Wang S, Chen CY, Rzasa JR, Tsao CY, Li J, VanArsdale E, Kim E, Zakaria FR, Payne GF, Bentley WE. Redox-enabled electronic interrogation and feedback control of hierarchical and networked biological systems. Nat Commun 2023; 14:8514. [PMID: 38129428 PMCID: PMC10739708 DOI: 10.1038/s41467-023-44223-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 12/05/2023] [Indexed: 12/23/2023] Open
Abstract
Microelectronic devices can directly communicate with biology, as electronic information can be transmitted via redox reactions within biological systems. By engineering biology's native redox networks, we enable electronic interrogation and control of biological systems at several hierarchical levels: proteins, cells, and cell consortia. First, electro-biofabrication facilitates on-device biological component assembly. Then, electrode-actuated redox data transmission and redox-linked synthetic biology allows programming of enzyme activity and closed-loop electrogenetic control of cellular function. Specifically, horseradish peroxidase is assembled onto interdigitated electrodes where electrode-generated hydrogen peroxide controls its activity. E. coli's stress response regulon, oxyRS, is rewired to enable algorithm-based feedback control of gene expression, including an eCRISPR module that switches cell-cell quorum sensing communication from one autoinducer to another-creating an electronically controlled 'bilingual' cell. Then, these disparate redox-guided devices are wirelessly connected, enabling real-time communication and user-based control. We suggest these methodologies will help us to better understand and develop sophisticated control for biology.
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Affiliation(s)
- Sally Wang
- Fischell Department of Bioengineering, University of Maryland, College Park, MD, USA
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
| | - Chen-Yu Chen
- Fischell Department of Bioengineering, University of Maryland, College Park, MD, USA
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
| | - John R Rzasa
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
| | - Chen-Yu Tsao
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
| | - Jinyang Li
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Eric VanArsdale
- Fischell Department of Bioengineering, University of Maryland, College Park, MD, USA
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
- National Research Council Postdoctoral Research Associate, United States Naval Research Laboratory, Washington, DC, USA
| | - Eunkyoung Kim
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
| | - Fauziah Rahma Zakaria
- Fischell Department of Bioengineering, University of Maryland, College Park, MD, USA
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
| | - Gregory F Payne
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA
| | - William E Bentley
- Fischell Department of Bioengineering, University of Maryland, College Park, MD, USA.
- Fischell Institute of Biomedical Devices, University of Maryland, College Park, MD, USA.
- Institute of Bioscience and Biotechnology Research (IBBR), University of Maryland, Rockville, MD, USA.
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2
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Motabar D, Li J, Wang S, Tsao CY, Tong X, Wang LX, Payne GF, Bentley WE. Simple, rapidly electroassembled thiolated PEG-based sensor interfaces enable rapid interrogation of antibody titer and glycosylation. Biotechnol Bioeng 2021; 118:2744-2758. [PMID: 33851726 DOI: 10.1002/bit.27793] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2020] [Revised: 03/26/2021] [Accepted: 04/04/2021] [Indexed: 12/20/2022]
Abstract
Process conditions established during the development and manufacture of recombinant protein therapeutics dramatically impacts their quality and clinical efficacy. Technologies that enable rapid assessment of product quality are critically important. Here, we describe the development of sensor interfaces that directly connect to electronics and enable near real-time assessment of antibody titer and N-linked galactosylation. We make use of a spatially resolved electroassembled thiolated polyethylene glycol hydrogel that enables electroactivated disulfide linkages. For titer assessment, we constructed a cysteinylated protein G that can be linked to the thiolated hydrogel allowing for robust capture and assessment of antibody concentration. For detecting galactosylation, the hydrogel is linked with thiolated sugars and their corresponding lectins, which enables antibody capture based on glycan pattern. Importantly, we demonstrate linear assessment of total antibody concentration over an industrially relevant range and the selective capture and quantification of antibodies with terminal β-galactose glycans. We also show that the interfaces can be reused after surface regeneration using a low pH buffer. Our functionalized interfaces offer advantages in their simplicity, rapid assembly, connectivity to electronics, and reusability. As they assemble directly onto electrodes that also serve as I/O registers, we envision incorporation into diagnostic platforms including those in manufacturing settings.
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Affiliation(s)
- Dana Motabar
- Fischell Department of Bioengineering, University of Maryland, College Park, Maryland, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, College Park, Maryland, USA
| | - Jinyang Li
- Fischell Department of Bioengineering, University of Maryland, College Park, Maryland, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, College Park, Maryland, USA
| | - Sally Wang
- Fischell Department of Bioengineering, University of Maryland, College Park, Maryland, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, College Park, Maryland, USA
| | - Chen-Yu Tsao
- Fischell Department of Bioengineering, University of Maryland, College Park, Maryland, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, College Park, Maryland, USA
| | - Xin Tong
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland, USA
| | - Lai-Xi Wang
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland, USA
| | - Gregory F Payne
- Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, College Park, Maryland, USA
| | - William E Bentley
- Fischell Department of Bioengineering, University of Maryland, College Park, Maryland, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, College Park, Maryland, USA
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3
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Bhokisham N, Liu Y, Brown AD, Payne GF, Culver JN, Bentley WE. Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2. Biofabrication 2020; 12:045017. [DOI: 10.1088/1758-5090/ab9e7a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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4
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Bhokisham N, VanArsdale E, Stephens KT, Hauk P, Payne GF, Bentley WE. A redox-based electrogenetic CRISPR system to connect with and control biological information networks. Nat Commun 2020; 11:2427. [PMID: 32415193 PMCID: PMC7228920 DOI: 10.1038/s41467-020-16249-x] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2019] [Accepted: 04/15/2020] [Indexed: 01/04/2023] Open
Abstract
Electronic information can be transmitted to cells directly from microelectronics via electrode-activated redox mediators. These transmissions are decoded by redox-responsive promoters which enable user-specified control over biological function. Here, we build on this redox communication modality by establishing an electronic eCRISPR conduit of information exchange. This system acts as a biological signal processor, amplifying signal reception and filtering biological noise. We electronically amplify bacterial quorum sensing (QS) signaling by activating LasI, the autoinducer-1 synthase. Similarly, we filter out unintended noise by inhibiting the native SoxRS-mediated oxidative stress response regulon. We then construct an eCRISPR based redox conduit in both E. coli and Salmonella enterica. Finally, we display eCRISPR based information processing that allows transmission of spatiotemporal redox commands which are then decoded by gelatin-encapsulated E. coli. We anticipate that redox communication channels will enable biohybrid microelectronic devices that could transform our abilities to electronically interpret and control biological function.
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Affiliation(s)
- Narendranath Bhokisham
- Biological Sciences Graduate Program-College of Computer, Mathematical and Natural Sciences, University of Maryland, 4066 Campus Drive, College Park, MD, 20742, USA.,Institute of Bioscience and Biotechnology Research, University of Maryland, 5115 Plant Sciences Building, College Park, MD, 20742, USA
| | - Eric VanArsdale
- Institute of Bioscience and Biotechnology Research, University of Maryland, 5115 Plant Sciences Building, College Park, MD, 20742, USA.,Fischell Department of Bioengineering, A. James Clark Hall, University of Maryland, College Park, MD, 20742, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, Room 5102, A. James Clark Hall, College Park, MD, 20742, USA
| | - Kristina T Stephens
- Institute of Bioscience and Biotechnology Research, University of Maryland, 5115 Plant Sciences Building, College Park, MD, 20742, USA.,Fischell Department of Bioengineering, A. James Clark Hall, University of Maryland, College Park, MD, 20742, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, Room 5102, A. James Clark Hall, College Park, MD, 20742, USA
| | - Pricila Hauk
- Institute of Bioscience and Biotechnology Research, University of Maryland, 5115 Plant Sciences Building, College Park, MD, 20742, USA
| | - Gregory F Payne
- Institute of Bioscience and Biotechnology Research, University of Maryland, 5115 Plant Sciences Building, College Park, MD, 20742, USA.,Fischell Department of Bioengineering, A. James Clark Hall, University of Maryland, College Park, MD, 20742, USA.,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, Room 5102, A. James Clark Hall, College Park, MD, 20742, USA
| | - William E Bentley
- Institute of Bioscience and Biotechnology Research, University of Maryland, 5115 Plant Sciences Building, College Park, MD, 20742, USA. .,Fischell Department of Bioengineering, A. James Clark Hall, University of Maryland, College Park, MD, 20742, USA. .,Robert E. Fischell Institute for Biomedical Devices, University of Maryland, Room 5102, A. James Clark Hall, College Park, MD, 20742, USA.
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5
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Electrodeposition of a magnetic and redox-active chitosan film for capturing and sensing metabolic active bacteria. Carbohydr Polym 2018; 195:505-514. [DOI: 10.1016/j.carbpol.2018.04.096] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Revised: 04/04/2018] [Accepted: 04/25/2018] [Indexed: 01/09/2023]
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6
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Liu Y, Wu HC, Bhokisham N, Li J, Hong KL, Quan DN, Tsao CY, Bentley WE, Payne GF. Biofabricating Functional Soft Matter Using Protein Engineering to Enable Enzymatic Assembly. Bioconjug Chem 2018; 29:1809-1822. [PMID: 29745651 PMCID: PMC7045599 DOI: 10.1021/acs.bioconjchem.8b00197] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Biology often provides the inspiration for functional soft matter, but biology can do more: it can provide the raw materials and mechanisms for hierarchical assembly. Biology uses polymers to perform various functions, and biologically derived polymers can serve as sustainable, self-assembling, and high-performance materials platforms for life-science applications. Biology employs enzymes for site-specific reactions that are used to both disassemble and assemble biopolymers both to and from component parts. By exploiting protein engineering methodologies, proteins can be modified to make them more susceptible to biology's native enzymatic activities. They can be engineered with fusion tags that provide (short sequences of amino acids at the C- and/or N- termini) that provide the accessible residues for the assembling enzymes to recognize and react with. This "biobased" fabrication not only allows biology's nanoscale components (i.e., proteins) to be engineered, but also provides the means to organize these components into the hierarchical structures that are prevalent in life.
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Affiliation(s)
| | - Hsuan-Chen Wu
- Department of Biochemical Science and Technology , National Taiwan University , Taipei City , Taiwan
| | | | | | - Kai-Lin Hong
- Department of Biochemical Science and Technology , National Taiwan University , Taipei City , Taiwan
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7
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Richter JW, Shull GM, Fountain JH, Guo Z, Musselman LP, Fiumera AC, Mahler GJ. Titanium dioxide nanoparticle exposure alters metabolic homeostasis in a cell culture model of the intestinal epithelium and Drosophila melanogaster. Nanotoxicology 2018; 12:390-406. [PMID: 29600885 DOI: 10.1080/17435390.2018.1457189] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Nanosized titanium dioxide (TiO2) is a common additive in food and cosmetic products. The goal of this study was to investigate if TiO2 nanoparticles affect intestinal epithelial tissues, normal intestinal function, or metabolic homeostasis using in vitro and in vivo methods. An in vitro model of intestinal epithelial tissue was created by seeding co-cultures of Caco-2 and HT29-MTX cells on a Transwell permeable support. These experiments were repeated with monolayers that had been cultured with the beneficial commensal bacteria Lactobacillus rhamnosus GG (L. rhamnosus). Glucose uptake and transport in the presence of TiO2 nanoparticles was assessed using fluorescent glucose analog 2-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino)-2-deoxyglucose (2-NBDG). When the cell monolayers were exposed to physiologically relevant doses of TiO2, a statistically significant reduction in glucose transport was observed. These differences in glucose absorption were eliminated in the presence of beneficial bacteria. The decrease in glucose absorption was caused by damage to intestinal microvilli, which decreased the surface area available for absorption. Damage to microvilli was ameliorated in the presence of L. rhamnosus. Complimentary studies in Drosophila melanogaster showed that TiO2 ingestion resulted in decreased body size and glucose content. The results suggest that TiO2 nanoparticles alter glucose transport across the intestinal epithelium, and that TiO2 nanoparticle ingestion may have physiological consequences.
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Affiliation(s)
- Jonathan W Richter
- a Department of Biomedical Engineering , Binghamton University , Binghamton , NY , USA
| | - Gabriella M Shull
- a Department of Biomedical Engineering , Binghamton University , Binghamton , NY , USA
| | - John H Fountain
- b Department of Biological Sciences , Binghamton University , Binghamton , NY , USA
| | - Zhongyuan Guo
- a Department of Biomedical Engineering , Binghamton University , Binghamton , NY , USA
| | - Laura P Musselman
- b Department of Biological Sciences , Binghamton University , Binghamton , NY , USA
| | - Anthony C Fiumera
- b Department of Biological Sciences , Binghamton University , Binghamton , NY , USA
| | - Gretchen J Mahler
- a Department of Biomedical Engineering , Binghamton University , Binghamton , NY , USA
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8
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Liu Y, Li J, Tschirhart T, Terrell JL, Kim E, Tsao C, Kelly DL, Bentley WE, Payne GF. Connecting Biology to Electronics: Molecular Communication via Redox Modality. Adv Healthc Mater 2017; 6. [PMID: 29045017 DOI: 10.1002/adhm.201700789] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2017] [Revised: 08/18/2017] [Indexed: 12/13/2022]
Abstract
Biology and electronics are both expert at for accessing, analyzing, and responding to information. Biology uses ions, small molecules, and macromolecules to receive, analyze, store, and transmit information, whereas electronic devices receive input in the form of electromagnetic radiation, process the information using electrons, and then transmit output as electromagnetic waves. Generating the capabilities to connect biology-electronic modalities offers exciting opportunities to shape the future of biosensors, point-of-care medicine, and wearable/implantable devices. Redox reactions offer unique opportunities for bio-device communication that spans the molecular modalities of biology and electrical modality of devices. Here, an approach to search for redox information through an interactive electrochemical probing that is analogous to sonar is adopted. The capabilities of this approach to access global chemical information as well as information of specific redox-active chemical entities are illustrated using recent examples. An example of the use of synthetic biology to recognize external molecular information, process this information through intracellular signal transduction pathways, and generate output responses that can be detected by electrical modalities is also provided. Finally, exciting results in the use of redox reactions to actuate biology are provided to illustrate that synthetic biology offers the potential to guide biological response through electrical cues.
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Affiliation(s)
- Yi Liu
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
| | - Jinyang Li
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
| | - Tanya Tschirhart
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
| | - Jessica L. Terrell
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
| | - Eunkyoung Kim
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
| | - Chen‐Yu Tsao
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
| | - Deanna L. Kelly
- Maryland Psychiatric Research Center University of Maryland School of Medicine Baltimore MD 21228 USA
| | - William E. Bentley
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
| | - Gregory F. Payne
- Institute for Bioscience and Biotechnology Research and Fischell Department of Bioengineering University of Maryland College Park MD 20742 USA
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9
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Bhokisham N, Liu Y, Pakhchanian H, Payne GF, Bentley WE. A Facile Two-Step Enzymatic Approach for Conjugating Proteins to Polysaccharide Chitosan at an Electrode Interface. Cell Mol Bioeng 2016; 10:134-142. [PMID: 31719855 DOI: 10.1007/s12195-016-0472-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2016] [Accepted: 10/26/2016] [Indexed: 11/30/2022] Open
Abstract
Biological components are integrated with electronic devices to create microsystems with novel functions and chitosan, a naturally occurring biopolymer, can play a significant role as an interface material. Chitosan can be electrodeposited within confined geometries by cathodic charge and appropriate electrode design and proteins can be conjugated to chitosan. However, conjugation chemistries can be slow and chitosan, a polycationic polysaccharide, enables non-specific binding in biofabrication processes. There is a need to speed up the assembly process and reduce non-specific binding. Here, we have developed a two-step methodology that accelerates protein assembly, reduces background and increases specificity. We first "coated" the surface of chitosan with a Lys-Tyr-Lys (KYK) tripeptide in a slow step using tyrosinase-mediated conjugation chemistry and then conjugated proteins with C-terminal glutamine-tags to the saturating KYK tripeptide via transglutaminase. As a demonstration, we assembled a functioning two-enzyme bacterial metabolic pathway on an electrode chip. Results indicated a fivefold decrease in non-specific binding and an improvement in signal to noise ratio from 0.3 to 20. This transglutaminase-mediated approach is simple and quick, it requires no chemical reagents, no printing or stamping devices; it employs biological components and is biologically benign to the component parts-all characteristics of biofabricated devices.
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Affiliation(s)
- Narendranath Bhokisham
- 1Biological Sciences Graduate Program - College of Computer, Mathematical and Natural Sciences, University of Maryland, College Park, 4066 Campus Drive, College Park, MD 20742 USA
- 2Institute of Bioscience and Biotechnology Research, University of Maryland, College Park, 5115 Plant Science and Landscape Architecture Building, College Park, MD 20742 USA
| | - Yi Liu
- 2Institute of Bioscience and Biotechnology Research, University of Maryland, College Park, 5115 Plant Science and Landscape Architecture Building, College Park, MD 20742 USA
| | - Haig Pakhchanian
- 3Fischell Department of Bioengineering, University of Maryland, College Park, Room 3122, Jeong H. Kim Engineering Building (Bldg. #225), College Park, MD 20742 USA
| | - Gregory F Payne
- 2Institute of Bioscience and Biotechnology Research, University of Maryland, College Park, 5115 Plant Science and Landscape Architecture Building, College Park, MD 20742 USA
- 3Fischell Department of Bioengineering, University of Maryland, College Park, Room 3122, Jeong H. Kim Engineering Building (Bldg. #225), College Park, MD 20742 USA
| | - William E Bentley
- 2Institute of Bioscience and Biotechnology Research, University of Maryland, College Park, 5115 Plant Science and Landscape Architecture Building, College Park, MD 20742 USA
- 3Fischell Department of Bioengineering, University of Maryland, College Park, Room 3122, Jeong H. Kim Engineering Building (Bldg. #225), College Park, MD 20742 USA
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10
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Terrell JL, Wu HC, Tsao CY, Barber NB, Servinsky MD, Payne GF, Bentley WE. Nano-guided cell networks as conveyors of molecular communication. Nat Commun 2015; 6:8500. [PMID: 26455828 PMCID: PMC4633717 DOI: 10.1038/ncomms9500] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2015] [Accepted: 08/28/2015] [Indexed: 01/06/2023] Open
Abstract
Advances in nanotechnology have provided unprecedented physical means to sample molecular space. Living cells provide additional capability in that they identify molecules within complex environments and actuate function. We have merged cells with nanotechnology for an integrated molecular processing network. Here we show that an engineered cell consortium autonomously generates feedback to chemical cues. Moreover, abiotic components are readily assembled onto cells, enabling amplified and 'binned' responses. Specifically, engineered cell populations are triggered by a quorum sensing (QS) signal molecule, autoinducer-2, to express surface-displayed fusions consisting of a fluorescent marker and an affinity peptide. The latter provides means for attaching magnetic nanoparticles to fluorescently activated subpopulations for coalescence into colour-indexed output. The resultant nano-guided cell network assesses QS activity and conveys molecular information as a 'bio-litmus' in a manner read by simple optical means.
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Affiliation(s)
- Jessica L Terrell
- Fischell Department of Bioengineering, University of Maryland, 2330 Jeong H. Kim Engineering Building, College Park, Maryland 20742, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland 20742, USA
| | - Hsuan-Chen Wu
- Fischell Department of Bioengineering, University of Maryland, 2330 Jeong H. Kim Engineering Building, College Park, Maryland 20742, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland 20742, USA
| | - Chen-Yu Tsao
- Fischell Department of Bioengineering, University of Maryland, 2330 Jeong H. Kim Engineering Building, College Park, Maryland 20742, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland 20742, USA
| | - Nathan B Barber
- Fischell Department of Bioengineering, University of Maryland, 2330 Jeong H. Kim Engineering Building, College Park, Maryland 20742, USA
| | - Matthew D Servinsky
- U.S. Army Research Laboratory, 2800 Powder Mill Road, Adelphi, Maryland 20783, USA
| | - Gregory F Payne
- Fischell Department of Bioengineering, University of Maryland, 2330 Jeong H. Kim Engineering Building, College Park, Maryland 20742, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland 20742, USA
| | - William E Bentley
- Fischell Department of Bioengineering, University of Maryland, 2330 Jeong H. Kim Engineering Building, College Park, Maryland 20742, USA.,Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland 20742, USA
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11
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Chitosan to Connect Biology to Electronics: Fabricating the Bio-Device Interface and Communicating Across This Interface. Polymers (Basel) 2014. [DOI: 10.3390/polym7010001] [Citation(s) in RCA: 73] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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12
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Mahler G. Metabolic engineering: enzyme control on a chip. NATURE NANOTECHNOLOGY 2014; 9:571-572. [PMID: 25064395 DOI: 10.1038/nnano.2014.160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Affiliation(s)
- Gretchen Mahler
- Department of Bioengineering, Binghamton University, Binghamton, New York 13902, USA
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13
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Lawrence J, O'Sullivan B, Lye GJ, Wohlgemuth R, Szita N. Microfluidic multi-input reactor for biocatalytic synthesis using transketolase. JOURNAL OF MOLECULAR CATALYSIS. B, ENZYMATIC 2013; 95:111-117. [PMID: 24187515 PMCID: PMC3724052 DOI: 10.1016/j.molcatb.2013.05.016] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Revised: 05/08/2013] [Accepted: 05/17/2013] [Indexed: 11/14/2022]
Abstract
Biocatalytic synthesis in continuous-flow microreactors is of increasing interest for the production of specialty chemicals. However, the yield of production achievable in these reactors can be limited by the adverse effects of high substrate concentration on the biocatalyst, including inhibition and denaturation. Fed-batch reactors have been developed in order to overcome this problem, but no continuous-flow solution exists. We present the design of a novel multi-input microfluidic reactor, capable of substrate feeding at multiple points, as a first step towards overcoming these problems in a continuous-flow setting. Using the transketolase-(TK) catalysed reaction of lithium hydroxypyruvate (HPA) and glycolaldehyde (GA) to l-erythrulose (ERY), we demonstrate the transposition of a fed-batch substrate feeding strategy to our microfluidic reactor. We obtained a 4.5-fold increase in output concentration and a 5-fold increase in throughput compared with a single input reactor.
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Affiliation(s)
- James Lawrence
- Department of Biochemical Engineering, University College London, Torrington Place, London WC1E 7JE, UK
| | - Brian O'Sullivan
- Department of Biochemical Engineering, University College London, Torrington Place, London WC1E 7JE, UK
| | - Gary J. Lye
- Department of Biochemical Engineering, University College London, Torrington Place, London WC1E 7JE, UK
| | | | - Nicolas Szita
- Department of Biochemical Engineering, University College London, Torrington Place, London WC1E 7JE, UK
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14
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Yang C, Yi H. Facile approaches to control catalytic activity of viral-templated palladium nanocatalysts for dichromate reduction. Biochem Eng J 2010. [DOI: 10.1016/j.bej.2010.08.002] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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15
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Liu Y, Kim E, Ghodssi R, Rubloff GW, Culver JN, Bentley WE, Payne GF. Biofabrication to build the biology–device interface. Biofabrication 2010; 2:022002. [DOI: 10.1088/1758-5082/2/2/022002] [Citation(s) in RCA: 78] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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