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Ansari M, Rajaraman G. Comparative oxidative ability of mononuclear and dinuclear high-valent iron-oxo species towards the activation of methane: does the axial/bridge atom modulate the reactivity? Dalton Trans 2023; 52:308-325. [PMID: 36504243 DOI: 10.1039/d2dt02559k] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Over the years, mononuclear FeIVO species have been extensively studied, but the presence of dinuclear FeIVO species in soluble methane monooxygenase (sMMO) has inspired the development of biomimic models that could activate inert substrates such as methane. There are some successful attempts; particularly the [(Por)(m-CBA) FeIV(μ-N)FeIV(O)(Por˙+)]- species has been reported to activate methane and yield decent catalytic turnover numbers and therefore regarded as the closest to the sMMO enzyme functional model, as no mononuclear FeIVO analogues could achieve this feat. In this work, we have studied a series of mono and dinuclear models using DFT and ab initio DLPNO-CCSD(T) calculations to probe the importance of nuclearity in enhancing the reactivity. We have probed the catalytic activities of four complexes: [(HO)FeIV(O)(Por)]- (1), [(HO)FeIV(O)(Por˙+)] (2), μ-oxo dinuclear iron species [(Por)(m-CBA)FeIV(μ-O)FeIV(O) (Por˙+)]- (3) and N-bridged dinuclear iron species [(Por)(m-CBA)FeIV(μ-N)FeIV(O)(Por˙+)]- (4) towards the activation of methane. Additionally, calculations were performed on the mononuclear models [(X)FeIV(O)(Por˙+)]n {X = N 4a (n = -2), NH 4b (n = -1) and NH24c (n = 0)} to understand the role of nuclearity in the reactivity. DFT calculations performed on species 1-4 suggest an interesting variation among them, with species 1-3 possessing an intermediate spin (S = 1) as a ground state and species 4 possessing a high-spin (S = 2) as a ground state. Furthermore, the two FeIV centres in species 3 and 4 are antiferromagnetically coupled, yielding a singlet state with a distinct difference in their electronic structure. On the other hand, species 2 exhibits a ferromagnetic coupling between the FeIV and the Por˙+ moiety. Our calculations suggest that the higher barriers for the C-H bond activation of methane and the rebound step for species 1 and 3 are very high in energy, rendering them unreactive towards methane, while species 2 and 4 have lower barriers, suggesting their reactivity towards methane. Studies on the system reveal that model 4a has multiple FeN bonds facilitating greater reactivity, whereas the other two models have longer Fe-N bonds and less radical character with steeper barriers. Strong electronic cooperativity is found to be facilitated by the bridging nitride atom, and this cooperativity is suppressed by substituents such as oxygen, rendering them inactive. Thus, our study unravels that apart from enhancing the nuclearity, bridging atoms that facilitate strong cooperation between the metals are required to activate very inert substrates such as methane, and our results are broadly in agreement with earlier experimental findings.
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Affiliation(s)
- Mursaleem Ansari
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India.
| | - Gopalan Rajaraman
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India.
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2
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Panda C, Doyle LM, Gericke R, McDonald AR. Rapid Iron(III)−Fluoride‐Mediated Hydrogen Atom Transfer. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202112683] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Chakadola Panda
- School of Chemistry Trinity College Dublin The University of Dublin, College Green Dublin 2 Ireland
| | - Lorna M. Doyle
- School of Chemistry Trinity College Dublin The University of Dublin, College Green Dublin 2 Ireland
| | - Robert Gericke
- School of Chemistry Trinity College Dublin The University of Dublin, College Green Dublin 2 Ireland
- Current address: Helmholtz-Zentrum Dresden-Rossendorf e. V. Institute of Resource Ecology Bautzner Landstrasse 400 01328 Dresden Germany
| | - Aidan R. McDonald
- School of Chemistry Trinity College Dublin The University of Dublin, College Green Dublin 2 Ireland
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3
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Panda C, Doyle LM, Gericke R, McDonald AR. Rapid Iron(III)-Fluoride-Mediated Hydrogen Atom Transfer. Angew Chem Int Ed Engl 2021; 60:26281-26286. [PMID: 34582619 PMCID: PMC9298026 DOI: 10.1002/anie.202112683] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Indexed: 01/08/2023]
Abstract
We anticipate high-valent metal-fluoride species will be highly effective hydrogen atom transfer (HAT) oxidants because of the magnitude of the H-F bond (in the product) that drives HAT oxidation. We prepared a dimeric FeIII (F)-F-FeIII (F) complex (1) by reacting [FeII (NCCH3 )2 (TPA)](ClO4 )2 (TPA=tris(2-pyridylmethyl)amine) with difluoro(phenyl)-λ3 -iodane (difluoroiodobenzene). 1 was a sluggish oxidant, however, it was readily activated by reaction with Lewis or Brønsted acids to yield a monomeric [FeIII (TPA)(F)(X)]+ complex (2) where X=F/OTf. 1 and 2 were characterized using NMR, EPR, UV/Vis, and FT-IR spectroscopies and mass spectrometry. 2 was a remarkably reactive FeIII reagent for oxidative C-H activation, demonstrating reaction rates for hydrocarbon HAT comparable to the most reactive FeIII and FeIV oxidants.
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Affiliation(s)
- Chakadola Panda
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland
| | - Lorna M Doyle
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland
| | - Robert Gericke
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland.,Current address: Helmholtz-Zentrum Dresden-Rossendorf e. V., Institute of Resource Ecology, Bautzner Landstrasse 400, 01328, Dresden, Germany
| | - Aidan R McDonald
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland
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4
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Gardner JG, Schneider JE, Anderson JS. Two, Three, or Not to Be? Elucidating Multiple Bonding in d 6 Pseudotetrahedral Oxo and Imide Complexes. Inorg Chem 2021; 60:13854-13860. [PMID: 34197705 DOI: 10.1021/acs.inorgchem.1c01022] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Late-transition-metal oxo and imide complexes play an important role in the catalytic functionalization and activation of small molecules. An emerging theme in this area over the past few decades has been the use of lower coordination numbers, and pseudotetrahedral geometries in particular, to stabilize what would otherwise be highly reactive species. However, the bonding structure in d6 oxo and imide complexes in this geometry is ambiguous. These species are typically depicted with a triple bond; however, recent experimental evidence suggests significant empirical differences between these complexes and other triply bonded complexes with lower d counts. Here we use a suite of computational orbital localization methods and electron density analyses to probe the bonding structure of isoelectronic d6 CoIII oxo and imide complexes. These analyses suggest that a triple-bond description is inaccurate because of a dramatically weakened σ interaction. While the exact bond order in these cases is necessarily dependent on the model used, several metrics suggest that the strength of the metal-O/N bond is most similar to that of other formally doubly bonded complexes.
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Affiliation(s)
- Joel G Gardner
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - Joseph E Schneider
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - John S Anderson
- Department of Chemistry, University of Chicago, Chicago, Illinois 60637, United States
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5
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Schneider JE, Goetz MK, Anderson JS. Statistical analysis of C-H activation by oxo complexes supports diverse thermodynamic control over reactivity. Chem Sci 2021; 12:4173-4183. [PMID: 34163690 PMCID: PMC8179456 DOI: 10.1039/d0sc06058e] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Accepted: 01/28/2021] [Indexed: 01/29/2023] Open
Abstract
Transition metal oxo species are key intermediates for the activation of strong C-H bonds. As such, there has been interest in understanding which structural or electronic parameters of metal oxo complexes determine their reactivity. Factors such as ground state thermodynamics, spin state, steric environment, oxygen radical character, and asynchronicity have all been cited as key contributors, yet there is no consensus on when each of these parameters is significant or the relative magnitude of their effects. Herein, we present a thorough statistical analysis of parameters that have been proposed to influence transition metal oxo mediated C-H activation. We used density functional theory (DFT) to compute parameters for transition metal oxo complexes and analyzed their ability to explain and predict an extensive data set of experimentally determined reaction barriers. We found that, in general, only thermodynamic parameters play a statistically significant role. Notably, however, there are independent and significant contributions from the oxidation potential and basicity of the oxo complexes which suggest a more complicated thermodynamic picture than what has been shown previously.
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Affiliation(s)
| | - McKenna K Goetz
- Department of Chemistry, University of Chicago Chicago IL 60637 USA
| | - John S Anderson
- Department of Chemistry, University of Chicago Chicago IL 60637 USA
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6
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Lim H, Jeon H, Hong S, Kim JH. Catalytic approach to in vivo metabolism of atractylenolide III using biomimetic iron–porphyrin complexes. RSC Adv 2021; 11:33048-33054. [PMID: 35493574 PMCID: PMC9042181 DOI: 10.1039/d1ra05014a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 09/18/2021] [Indexed: 11/21/2022] Open
Abstract
In vivo oxygenation of atractylenolide III during the metabolism and in situ oxidation mechanism by an iron–porphyrin iron(iv)-oxo porphyrin π-cation–radical complex.
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Affiliation(s)
- Hanae Lim
- Department of Chemistry, The Research Institute of Natural Sciences, Sookmyung Women's University, 04310, Seoul, Republic of Korea
| | - Hyeri Jeon
- Department of Chemistry, The Research Institute of Natural Sciences, Sookmyung Women's University, 04310, Seoul, Republic of Korea
| | - Seungwoo Hong
- Department of Chemistry, The Research Institute of Natural Sciences, Sookmyung Women's University, 04310, Seoul, Republic of Korea
| | - Jung-Hoon Kim
- Division of Pharmacology, School of Korean Medicine, Pusan National University, 50612, Yangsan, Republic of Korea
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7
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Ma Z, Nakatani N, Fujii H, Hada M. DFT insight into axial ligand effects on electronic structure and mechanistic reactivity of oxoiron(iv) porphyrin. Phys Chem Chem Phys 2020; 22:12173-12179. [PMID: 32436532 DOI: 10.1039/d0cp01867h] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
A series of DFT studies on the epoxidation reactions of olefins by oxoiron(iv) porphyrin cation radical complexes are performed in this work, to elucidate the axial ligand effects on the electronic features and reaction mechanism in detail. We analyzed the molecular orbitals, spin populations, and Mulliken charges along the intrinsic reaction coordinate route. From the findings, we confirmed that the interaction between the axial ligand and the oxoiron(iv) porphyrin is strong and the initial changes in the electronic structures occur early during the reaction, which further enhances the reactivity toward olefin epoxidation. More importantly, the patterns of the electron transfer from olefin to oxoiron(iv) porphyrin were impacted by the axial ligand. The pattern of successive electron transfer from Fe-O to porphyrin and then from C[double bond, length as m-dash]C to Fe-O for oxoiron(iv) porphyrin in case of fluorine and acetate axial ligands, whereas the pattern of electron transfer occurs from C[double bond, length as m-dash]C to porphyrin for oxoiron(iv) porphyrin in case of chlorine and nitrate axial ligands during the epoxidation reaction of the olefins. We also determined the intersystem crossing between the quartet and sextet spin states occurring at the second transition state (TS2) by the analysis of the two-dimensional potential energy surface.
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Affiliation(s)
- Zhifeng Ma
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan.
| | - Naoki Nakatani
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan.
| | - Hiroshi Fujii
- Department of Chemistry, Graduate School of Humanities and Science, Nara Women's University, Kitauoyanishi, Nara, 630-8506, Japan
| | - Masahiko Hada
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan.
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8
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Hubbard CD, Chatterjee D, Oszajca M, Polaczek J, Impert O, Chrzanowska M, Katafias A, Puchta R, van Eldik R. Inorganic reaction mechanisms. A personal journey. Dalton Trans 2020; 49:4599-4659. [PMID: 32162632 DOI: 10.1039/c9dt04620h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
This review covers highlights of the work performed in the van Eldik group on inorganic reaction mechanisms over the past two decades in the form of a personal journey. Topics that are covered include, from NO to HNO chemistry, peroxide activation in model porphyrin and enzymatic systems, the wonder-world of RuIII(edta) chemistry, redox chemistry of Ru(iii) complexes, Ru(ii) polypyridyl complexes and their application, relevant physicochemical properties and reaction mechanisms in ionic liquids, and mechanistic insight from computational chemistry. In each of these sections, typical examples of mechanistic studies are presented in reference to related work reported in the literature.
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Affiliation(s)
- Colin D Hubbard
- Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstr. 1, 91058 Erlangen, Germany.
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9
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Ma Z, Nakatani N, Fujii H, Hada M. Effect of External Electric Fields on the Oxidation Reaction of Olefins by Fe(IV)OCl–Porphyrin Complexes. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2020. [DOI: 10.1246/bcsj.20190293] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Zhifeng Ma
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
| | - Naoki Nakatani
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
| | - Hiroshi Fujii
- Department of Chemistry, Graduate School of Humanities and Science, Nara Women’s University, Kitauoyanishi, Nara 630-8506, Japan
| | - Masahiko Hada
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
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10
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Ma Z, Ukaji K, Nakatani N, Fujii H, Hada M. Substitution effects on olefin epoxidation catalyzed by Oxoiron(IV) porphyrin π-cation radical complexes: A dft study. J Comput Chem 2019; 40:1780-1788. [PMID: 30938845 DOI: 10.1002/jcc.25831] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2019] [Revised: 03/12/2019] [Accepted: 03/15/2019] [Indexed: 01/26/2023]
Abstract
The effects of peripheral fluorine atoms on epoxidation reactions of ethylene by oxoiron(IV) porphyrin cation radical complex in the quartet and sextet spin multiplicities are systematically investigated using the DFT method. The overall reaction routes are determined using a model system of ethylene and Fe(IV)OCl-porphyrin with substituted fluorine atoms. By obtaining the energy diagrams and electron- and spin-density difference contour maps of the transition states and intermediate compounds, we confirm that the electron-withdrawing by peripheral fluorine atoms enhances the reactivity as the number of fluorine atoms increases, as is observed experimentally. The intersystem crossing between the quartet and sextet spin multiplicities is discussed by means of the intrinsic reaction coordinate method. We conclude that the rate-determining step is located at the first transition state (TS1) for the activation of CC and FeO bonds, and the ground electronic state changes from quartet to sextet around the TS1. © 2019 Wiley Periodicals, Inc.
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Affiliation(s)
- Zhifeng Ma
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
| | - Kasumi Ukaji
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
| | - Naoki Nakatani
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
| | - Hiroshi Fujii
- Department of Chemistry, Graduate School of Humanities and Science, Nara Women's University, Kitauoyanishi, Nara 630-8506, Japan
| | - Masahiko Hada
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
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11
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Cantú Reinhard FG, DuBois JL, de Visser SP. Catalytic Mechanism of Nogalamycin Monoxygenase: How Does Nature Synthesize Antibiotics without a Metal Cofactor? J Phys Chem B 2018; 122:10841-10854. [DOI: 10.1021/acs.jpcb.8b09648] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, U.K
| | - Jennifer L. DuBois
- Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana 59715-3400, United States
| | - Sam P. de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, U.K
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12
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Postils V, Saint-André M, Timmins A, Li XX, Wang Y, Luis JM, Solà M, de Visser SP. Quantum Mechanics/Molecular Mechanics Studies on the Relative Reactivities of Compound I and II in Cytochrome P450 Enzymes. Int J Mol Sci 2018; 19:E1974. [PMID: 29986417 PMCID: PMC6073316 DOI: 10.3390/ijms19071974] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Revised: 06/28/2018] [Accepted: 07/02/2018] [Indexed: 02/03/2023] Open
Abstract
The cytochromes P450 are drug metabolizing enzymes in the body that typically react with substrates through a monoxygenation reaction. During the catalytic cycle two reduction and protonation steps generate a high-valent iron (IV)-oxo heme cation radical species called Compound I. However, with sufficient reduction equivalents present, the catalytic cycle should be able to continue to the reduced species of Compound I, called Compound II, rather than a reaction of Compound I with substrate. In particular, since electron transfer is usually on faster timescales than atom transfer, we considered this process feasible and decided to investigate the reaction computationally. In this work we present a computational study using density functional theory methods on active site model complexes alongside quantum mechanics/molecular mechanics calculations on full enzyme structures of cytochrome P450 enzymes. Specifically, we focus on the relative reactivity of Compound I and II with a model substrate for O⁻H bond activation. We show that generally the barrier heights for hydrogen atom abstraction are higher in energy for Compound II than Compound I for O⁻H bond activation. Nevertheless, for the activation of such bonds, Compound II should still be an active oxidant under enzymatic conditions. As such, our computational modelling predicts that under high-reduction environments the cytochromes P450 can react with substrates via Compound II but the rates will be much slower.
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Affiliation(s)
- Verònica Postils
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Maria Aurèlia Capmany i Farnés, 69, 17003 Girona, Catalonia, Spain.
- Manchester Institute of Biotechnology, School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
| | - Maud Saint-André
- Manchester Institute of Biotechnology, School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
| | - Amy Timmins
- Manchester Institute of Biotechnology, School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
| | - Xiao-Xi Li
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China.
| | - Yong Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China.
| | - Josep M Luis
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Maria Aurèlia Capmany i Farnés, 69, 17003 Girona, Catalonia, Spain.
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Maria Aurèlia Capmany i Farnés, 69, 17003 Girona, Catalonia, Spain.
| | - Sam P de Visser
- Manchester Institute of Biotechnology, School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
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Huang X, Groves JT. Oxygen Activation and Radical Transformations in Heme Proteins and Metalloporphyrins. Chem Rev 2018; 118:2491-2553. [PMID: 29286645 PMCID: PMC5855008 DOI: 10.1021/acs.chemrev.7b00373] [Citation(s) in RCA: 582] [Impact Index Per Article: 97.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Indexed: 12/20/2022]
Abstract
As a result of the adaptation of life to an aerobic environment, nature has evolved a panoply of metalloproteins for oxidative metabolism and protection against reactive oxygen species. Despite the diverse structures and functions of these proteins, they share common mechanistic grounds. An open-shell transition metal like iron or copper is employed to interact with O2 and its derived intermediates such as hydrogen peroxide to afford a variety of metal-oxygen intermediates. These reactive intermediates, including metal-superoxo, -(hydro)peroxo, and high-valent metal-oxo species, are the basis for the various biological functions of O2-utilizing metalloproteins. Collectively, these processes are called oxygen activation. Much of our understanding of the reactivity of these reactive intermediates has come from the study of heme-containing proteins and related metalloporphyrin compounds. These studies not only have deepened our understanding of various functions of heme proteins, such as O2 storage and transport, degradation of reactive oxygen species, redox signaling, and biological oxygenation, etc., but also have driven the development of bioinorganic chemistry and biomimetic catalysis. In this review, we survey the range of O2 activation processes mediated by heme proteins and model compounds with a focus on recent progress in the characterization and reactivity of important iron-oxygen intermediates. Representative reactions initiated by these reactive intermediates as well as some context from prior decades will also be presented. We will discuss the fundamental mechanistic features of these transformations and delineate the underlying structural and electronic factors that contribute to the spectrum of reactivities that has been observed in nature as well as those that have been invented using these paradigms. Given the recent developments in biocatalysis for non-natural chemistries and the renaissance of radical chemistry in organic synthesis, we envision that new enzymatic and synthetic transformations will emerge based on the radical processes mediated by metalloproteins and their synthetic analogs.
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Affiliation(s)
- Xiongyi Huang
- Department
of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
- Department
of Chemistry, California Institute of Technology, Pasadena, California 91125, United States
| | - John T. Groves
- Department
of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
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Lee NF, Patel D, Liu H, Zhang R. Insights from kinetic studies of photo-generated compound II models: Reactivity toward aryl sulfides. J Inorg Biochem 2018; 183:58-65. [PMID: 29550659 DOI: 10.1016/j.jinorgbio.2018.03.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2017] [Revised: 03/05/2018] [Accepted: 03/08/2018] [Indexed: 10/17/2022]
Abstract
Iron(IV)-oxo porphyrins [FeIV(Por)O] (Por = poprhyrin), commonly called compound II models, were produced in three electron-deficient ligands by visible light irradiation of highly photo-labile porphyrin-iron(III) bromates or chlorates. The kinetics of oxygen transfer atom (OAT) reactions with aryl sulfides by these photo-generated [FeIV(Por)O] (3) were studied in CH3CN solutions. The iron(IV)-oxo porphyrins under study include 5,10,15,20-tetra(2,6-dichlorophenyl)porphyrin-iron(IV)-oxo (3a), 5,10,15,20-tetra(2,6-difluorophenyl)porphyrin-iron(IV)-oxo (3b), and 5,10,15,20-tetra(pentafluorophenyl)porphyrin-iron(IV)-oxo (3c). As expected, complexes 3 were competent oxidants and reacted rapidly with thioanisoles to give the corresponding sulfoxides with minor over-oxidation sulfones. Apparent second-order rate constants determined under pseudo-first-order conditions for sulfide oxidation reactions are (9.8 ± 0.1) × 102-(3.7 ± 0.3) × 101 M-1 s-1, which are 3 to 4 orders of magnitude greater in comparison to those of alkene epoxidations and activated CH bond oxidations by the same oxo species. Conventional Hammett analyses gave non-linear correlations, indicating no significant charge developed at the sulfur during the oxidation process. For a given substrate, the reactivity order for the iron(IV)-oxo species was 3c < 3b < 3a, which is inverted from expectations on the basis of the electron-withdrawing capacity of the porphyrin macrocycles. The absolute rate constants from kinetic studies provided insights into the transient oxidants in catalytic reactions under turnover conditions where actual reactive intermediates are not observable. Our kinetic and catalytic competition results strongly suggest that 3 may undergo a disproportionation reaction to form a higher oxidized iron(IV)-oxo porphyrin radical cations as the true oxidant.
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Affiliation(s)
- Ngo Fung Lee
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States
| | - Dharmesh Patel
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States
| | - Haiyan Liu
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States
| | - Rui Zhang
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States.
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Mandal D, Mallick D, Shaik S. Kinetic Isotope Effect Determination Probes the Spin of the Transition State, Its Stereochemistry, and Its Ligand Sphere in Hydrogen Abstraction Reactions of Oxoiron(IV) Complexes. Acc Chem Res 2018; 51:107-117. [PMID: 29297671 DOI: 10.1021/acs.accounts.7b00442] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
This Account outlines interplay of theory and experiment in the quest to identify the reactive-spin-state in chemical reactions that possess a few spin-dependent routes. Metalloenzymes and synthetic models have forged in recent decades an area of increasing appeal, in which oxometal species bring about functionalization of hydrocarbons under mild conditions and via intriguing mechanisms that provide a glimpse of Nature's designs to harness these reactions. Prominent among these are oxoiron(IV) complexes, which are potent H-abstractors. One of the key properties of oxoirons is the presence of close-lying spin-states, which can mediate H-abstractions. As such, these complexes form a fascinating chapter of spin-state chemistry, in which chemical reactivity involves spin-state interchange, so-called two-state reactivity (TSR) and multistate reactivity (MSR). TSR and MSR pose mechanistic challenges. How can one determine the structure of the reactive transition state (TS) and its spin state for these mechanisms? Calculations can do it for us, but the challenge is to find experimental probes. There are, however, no clear kinetic signatures for the reactive-spin-state in such reactions. This is the paucity that our group has been trying to fill for sometime. Hence, it is timely to demonstrate how theory joins experiment in realizing this quest. This Account uses a set of the H-abstraction reactions of 24 synthetic oxoiron(IV) complexes and 11 hydrocarbons, together undergoing H-abstraction reactions with TSR/MSR options, which provide experimentally determined kinetic isotope effect (KIEexp) data. For this set, we demonstrate that comparing KIEexp results with calculated tunneling-augmented KIE (KIETC) data leads to a clear identification of the reactive spin-state during H-abstraction reactions. In addition, generating KIEexp data for a reaction of interest, and comparing these to KIETC values, provides the mechanistic chemist with a powerful capability to identify the reactive-TS in terms of not only its spin state but also its geometry and ligand-sphere constitution. Since tunneling "cuts through" barriers, it serves as a chemical selectivity factor. Thus, we show that in a family of oxoirons reacting with one hydrocarbon, the tunneling efficiency increases as the ligands become better electron donors. This generates counterintuitive-reactivity patterns, like antielectrophilic reactivity, and induces spin-state reactivity reversals because of differing steric demands of the corresponding 2S+1TS species, etc. Finally, for the same series, the Account reaches intuitive understanding of tunneling trends. It is shown that the increase of ligand's donicity results in electrostatic narrowing of the barrier, while the decrease of donicity and increase of bond-order asymmetry in the TS (inter alia due to Bell-Evans-Polanyi effects) broadens the barrier. Predictions are made that usage of powerful electron-donating ligands may train H-abstractors to activate the strongest C-H bond in a molecule. The concepts developed here are likely to be applicable to other oxometals in the d- and f-blocks.
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Affiliation(s)
- Debasish Mandal
- Institute of Chemistry, The Hebrew University of Jerusalem, Givat Ram Campus, 91904 Jerusalem, Israel
| | - Dibyendu Mallick
- Institute of Chemistry, The Hebrew University of Jerusalem, Givat Ram Campus, 91904 Jerusalem, Israel
| | - Sason Shaik
- Institute of Chemistry, The Hebrew University of Jerusalem, Givat Ram Campus, 91904 Jerusalem, Israel
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Baglia RA, Zaragoza JPT, Goldberg DP. Biomimetic Reactivity of Oxygen-Derived Manganese and Iron Porphyrinoid Complexes. Chem Rev 2017; 117:13320-13352. [PMID: 28991451 PMCID: PMC6058703 DOI: 10.1021/acs.chemrev.7b00180] [Citation(s) in RCA: 204] [Impact Index Per Article: 29.1] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Heme proteins utilize the heme cofactor, an iron porphyrin, to perform a diverse range of reactions including dioxygen binding and transport, electron transfer, and oxidation/oxygenations. These reactions share several key metalloporphyrin intermediates, typically derived from dioxygen and its congeners such as hydrogen peroxide. These species are composed of metal-dioxygen, metal-superoxo, metal-peroxo, and metal-oxo adducts. A wide variety of synthetic metalloporphyrinoid complexes have been synthesized to generate and stabilize these intermediates. These complexes have been studied to determine the spectroscopic features, structures, and reactivities of such species in controlled and well-defined environments. In this Review, we summarize recent findings on the reactivity of these species with common porphyrinoid scaffolds employed for biomimetic studies. The proposed mechanisms of action are emphasized. This Review is organized by structural type of metal-oxygen intermediate and broken into subsections based on the metal (manganese and iron) and porphyrinoid ligand (porphyrin, corrole, and corrolazine).
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Affiliation(s)
- Regina A. Baglia
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Jan Paulo T. Zaragoza
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - David P. Goldberg
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
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Chatterjee D, van Eldik R. RuIII(EDTA) mediated activation of redox signalling molecules. Coord Chem Rev 2017. [DOI: 10.1016/j.ccr.2017.08.024] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Mallick D, Shaik S. Kinetic Isotope Effect Probes the Reactive Spin State, As Well As the Geometric Feature and Constitution of the Transition State during H-Abstraction by Heme Compound II Complexes. J Am Chem Soc 2017; 139:11451-11459. [PMID: 28737390 DOI: 10.1021/jacs.7b04247] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
What do experimentally measured kinetic isotope effects (KIEs) tell us about H-abstraction reactions with multispin-state reactivity options? Using DFT calculations with tunneling corrections for experimentally studied H-abstraction reactions of porphyrin-Compound II species (Chem.-Eur. J. 2014, 20, 14437; Angew. Chem., Int. Ed. 2008, 47, 7321) with cyclohexane, dihydroanthracene (DHA), and xanthene (Xan), we show here that KIE is a selective probe that identifies the experimentally reactive spin state. At the same time, comparison of calculated and experimental KIE values permits us to determine the structural orientation of the transition states, as well as the presence/absence of an axial ligand, and the effect of porphyrin substituents. The studied compound II (Cpd II) species involve porphine, and porphyrin ligands with different meso-substituents, TPFPP (tetrakis(pentafluorophenyl)porphyrin dianion) and TMP (tetramesitylporphyrin dianion), with and without imidazole axial ligands. The DFT calculations reveal three potential pathways: quintet and triplet σ-pathways (5Hσ and 3Hσ) that possess linear transition state (TS) structures, and a triplet π -pathway (3Hπ) having a bent TS structure. Without an axial ligand, the 5Hσ pathways for these Cpd II complexes cross below the triplet states. The axial ligand raises the barriers for the quintet and triplet σ-pathways and quenches any chances for two-state reactivity, thus proceeding via the 3Hπ pathway. All of these pathways exhibit characteristic KIE values: very large for 3Hπ (48-200), small for 5Hσ (3-9), and intermediate for 3Hσ (23-51). The calculated KIEs for (TPFPP)FeIV═O without an axial ligand reveal that 3Hσ is the only pathway having a KIE that matches the experimental values, for the reactions with DHA and Xan (Angew. Chem., Int. Ed. 2008, 47, 7321). Indeed, theory shows that tunneling significantly lowers the 3Hσ barrier rendering it the sole reactive state for the reaction. A prediction is made for the reactivity and KIE of (TMP)FeIV═O complex, and a comparison is made with the analogous nonheme complexes.
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Affiliation(s)
- Dibyendu Mallick
- Institute of Chemistry and the Lise Meitner Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem , Jerusalem 91904, Israel
| | - Sason Shaik
- Institute of Chemistry and the Lise Meitner Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem , Jerusalem 91904, Israel
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Pattanayak S, Jasniewski AJ, Rana A, Draksharapu A, Singh KK, Weitz A, Hendrich M, Que L, Dey A, Sen Gupta S. Spectroscopic and Reactivity Comparisons of a Pair of bTAML Complexes with Fe V═O and Fe IV═O Units. Inorg Chem 2017; 56:6352-6361. [PMID: 28481521 DOI: 10.1021/acs.inorgchem.7b00448] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
In this report we compare the geometric and electronic structures and reactivities of [FeV(O)]- and [FeIV(O)]2- species supported by the same ancillary nonheme biuret tetraamido macrocyclic ligand (bTAML). Resonance Raman studies show that the Fe═O vibration of the [FeIV(O)]2- complex 2 is at 798 cm-1, compared to 862 cm-1 for the corresponding [FeV(O)]- species 3, a 64 cm-1 frequency difference reasonably reproduced by density functional theory calculations. These values are, respectively, the lowest and the highest frequencies observed thus far for nonheme high-valent Fe═O complexes. Extended X-ray absorption fine structure analysis of 3 reveals an Fe═O bond length of 1.59 Å, which is 0.05 Å shorter than that found in complex 2. The redox potentials of 2 and 3 are 0.44 V (measured at pH 12) and 1.19 V (measured at pH 7) versus normal hydrogen electrode, respectively, corresponding to the [FeIV(O)]2-/[FeIII(OH)]2- and [FeV(O)]-/[FeIV(O)]2- couples. Consistent with its higher potential (even after correcting for the pH difference), 3 oxidizes benzyl alcohol at pH 7 with a second-order rate constant that is 2500-fold bigger than that for 2 at pH 12. Furthermore, 2 exhibits a classical kinteic isotope effect (KIE) of 3 in the oxidation of benzyl alcohol to benzaldehyde versus a nonclassical KIE of 12 for 3, emphasizing the reactivity differences between 2 and 3.
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Affiliation(s)
- Santanu Pattanayak
- Chemical Engineering Division, CSIR-National Chemical Laboratory , Pune 411008, India
| | - Andrew J Jasniewski
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Atanu Rana
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , Kolkata 700032, India
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Kundan K Singh
- Chemical Engineering Division, CSIR-National Chemical Laboratory , Pune 411008, India
| | - Andrew Weitz
- Department of Chemistry, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States
| | - Michael Hendrich
- Department of Chemistry, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Abhishek Dey
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , Kolkata 700032, India
| | - Sayam Sen Gupta
- Department of Chemical Sciences, Indian Institute of Science Education and Research-Kolkata , Mohanpur, West Bengal 741246, India
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20
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Li XX, Postils V, Sun W, Faponle AS, Solà M, Wang Y, Nam W, de Visser SP. Reactivity Patterns of (Protonated) Compound II and Compound I of Cytochrome P450: Which is the Better Oxidant? Chemistry 2017; 23:6406-6418. [PMID: 28295741 DOI: 10.1002/chem.201700363] [Citation(s) in RCA: 56] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2017] [Indexed: 01/27/2023]
Abstract
The cytochromes P450 are versatile enzymes in human physiology that perform substrate hydroxylation reactions extremely efficiently. In this work, we present results of a computational study on the reactivity patterns of Compound I, Compound II, and protonated Compound II with model substrates, and we address the question of which of these compounds is the most effective oxidant? All calculations, regardless of the substrate, implicated that Compound I is the superior oxidant of the three. However, Compound II and protonated Compound II were found to react with free energies of activation that are only a few kcal mol-1 higher in energy than those obtained with Compound I. Therefore, Compound II and protonated Compound II should be able to react with aliphatic groups with moderate C-H bond strengths. We have analysed all results in detail and have given electronic, thermochemical, valence bond, and molecular orbital rationalizations on the reactivity differences and explained experimental product distributions. Overall, the findings implied that alternative oxidants could operate alongside Compound I in complex reaction mechanisms of enzymatic and synthetic iron porphyrinoid complexes.
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Affiliation(s)
- Xiao-Xi Li
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
| | - Verònica Postils
- Institut de Química Computacional i Catàlisi (IQCC) and Department de Química, Universitat de Girona, Campus de Montilivi, C/ Maria Aurèlia Capmany 6, 17003, Girona, Catalonia, Spain.,The Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Wei Sun
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
| | - Abayomi S Faponle
- The Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi (IQCC) and Department de Química, Universitat de Girona, Campus de Montilivi, C/ Maria Aurèlia Capmany 6, 17003, Girona, Catalonia, Spain
| | - Yong Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
| | - Wonwoo Nam
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou, 730000, P. R. China.,Department of Chemistry and Nano Science, Ewha Womans University, Seoul, 03760, Korea
| | - Sam P de Visser
- The Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
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Gao H, Groves JT. Fast Hydrogen Atom Abstraction by a Hydroxo Iron(III) Porphyrazine. J Am Chem Soc 2017; 139:3938-3941. [PMID: 28245648 DOI: 10.1021/jacs.6b13091] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A reactive hydroxoferric porphyrazine complex, [(PyPz)FeIII(OH) (OH2)]4+ (1, PyPz = tetramethyl-2,3-pyridino porphyrazine), has been prepared via one-electron oxidation of the corresponding ferrous species [(PyPz)FeII(OH2)2]4+ (2). Electrochemical analysis revealed a pH-dependent and remarkably high FeIII-OH/FeII-OH2 reduction potential of 680 mV vs Ag/AgCl at pH 5.2. Nernstian behavior from pH 2 to pH 8 indicates a one-proton, one-electron interconversion throughout that range. The O-H bond dissociation energy of the FeII-OH2 complex was estimated to be 84 kcal mol-1. Accordingly, 1 reacts rapidly with a panel of substrates via C-H hydrogen atom transfer (HAT), reducing 1 to [(PyPz)FeII(OH2)2]4+ (2). The second-order rate constant for the reaction of [(PyPz)FeIII(OH) (OH2)]4+ with xanthene was 2.22 × 103 M-1 s-1, 5-6 orders of magnitude faster than other reported FeIII-OH complexes and faster than many ferryl complexes.
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Affiliation(s)
- Hongxin Gao
- Department of Chemistry, Princeton University , Princeton, New Jersey 08544, United States
| | - John T Groves
- Department of Chemistry, Princeton University , Princeton, New Jersey 08544, United States
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22
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Faponle AS, de Visser SP. The Role of Nonheme Transition Metal-Oxo, -Peroxo, and -Superoxo Intermediates in Enzyme Catalysis and Reactions of Bioinspired Complexes. ADVANCES IN INORGANIC CHEMISTRY 2017. [DOI: 10.1016/bs.adioch.2017.01.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Oszajca M, Brindell M, Orzeł Ł, Dąbrowski JM, Śpiewak K, Łabuz P, Pacia M, Stochel-Gaudyn A, Macyk W, van Eldik R, Stochel G. Mechanistic studies on versatile metal-assisted hydrogen peroxide activation processes for biomedical and environmental incentives. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2016.05.013] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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Faponle AS, Banse F, de Visser SP. Arene activation by a nonheme iron(III)-hydroperoxo complex: pathways leading to phenol and ketone products. J Biol Inorg Chem 2016; 21:453-62. [PMID: 27099221 DOI: 10.1007/s00775-016-1354-y] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2016] [Accepted: 04/11/2016] [Indexed: 11/28/2022]
Abstract
Iron(III)-hydroperoxo complexes are found in various nonheme iron enzymes as catalytic cycle intermediates; however, little is known on their catalytic properties. The recent work of Banse and co-workers on a biomimetic nonheme iron(III)-hydroperoxo complex provided evidence of its involvement in reactivity with arenes. This contrasts the behavior of heme iron(III)-hydroperoxo complexes that are known to be sluggish oxidants. To gain insight into the reaction mechanism of the biomimetic iron(III)-hydroperoxo complex with arenes, we performed a computational (density functional theory) study. The calculations show that iron(III)-hydroperoxo reacts with substrates via low free energies of activation that should be accessible at room temperature. Moreover, a dominant ketone reaction product is observed as primary products rather than the thermodynamically more stable phenols. These product distributions are analyzed and the calculations show that charge interaction between the iron(III)-hydroxo group and the substrate in the intermediate state pushes the transferring proton to the meta-carbon atom of the substrate and guides the selectivity of ketone formation. These studies show that the relative ratio of ketone versus phenol as primary products can be affected by external interactions of the oxidant with the substrate. Moreover, iron(III)-hydroperoxo complexes are shown to selectively give ketone products, whereas iron(IV)-oxo complexes will react with arenes to form phenols instead.
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Affiliation(s)
- Abayomi S Faponle
- Manchester Institute of Biotechnology, School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Frédéric Banse
- Institut de Chimie Moleculaire et des Materiaux d'Orsay, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay Cedex, France.
| | - Sam P de Visser
- Manchester Institute of Biotechnology, School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK.
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Oszajca M, Franke A, Brindell M, Stochel G, van Eldik R. Redox cycling in the activation of peroxides by iron porphyrin and manganese complexes. ‘Catching’ catalytic active intermediates. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2015.01.013] [Citation(s) in RCA: 56] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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26
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Franke A, van Eldik R. Spectroscopic and Kinetic Evidence for the Crucial Role of Compound 0 in the P450cam -Catalyzed Hydroxylation of Camphor by Hydrogen Peroxide. Chemistry 2015; 21:15201-10. [PMID: 26353996 DOI: 10.1002/chem.201501886] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2015] [Indexed: 11/09/2022]
Abstract
The hydroperoxo iron(III) intermediate P450cam Fe(III) -OOH, being the true Compound 0 (Cpd 0) involved in the natural catalytic cycle of P450cam , could be transiently observed in the peroxo-shunt oxidation of the substrate-free enzyme by hydrogen peroxide under mild basic conditions and low temperature. The prolonged lifetime of Cpd 0 enabled us to kinetically examine the formation and reactivity of P450cam Fe(III) -OOH species as a function of varying reaction conditions, such as pH, and concentration of H2 O2 , camphor, and potassium ions. The mechanism of hydrogen peroxide binding to the substrate-free form of P450cam differs completely from that observed for other heme proteins possessing the distal histidine as a general acid-base catalyst and is mainly governed by the ability of H2 O2 to undergo deprotonation at the hydroxo ligand coordinated to the iron(III) center under conditions of pH≥p${K{{{\rm P450}\hfill \atop {\rm a}\hfill}}}$. Notably, no spectroscopic evidence for the formation of either Cpd I or Cpd II as products of heterolytic or homolytic OO bond cleavage, respectively, in Cpd 0 could be observed under the selected reaction conditions. The kinetic data obtained from the reactivity studies involving (1R)-camphor, provide, for the first time, experimental evidence for the catalytic activity of the P450Fe(III) -OOH intermediate in the oxidation of the natural substrate of P450cam .
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Affiliation(s)
- Alicja Franke
- Inorganic Chemistry, Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstrasse 1, 91058 Erlangen (Germany)
| | - Rudi van Eldik
- Inorganic Chemistry, Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstrasse 1, 91058 Erlangen (Germany). .,Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060 Krakow (Poland).
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Mills MR, Burton AE, Mori DI, Ryabov AD, Collins TJ. Iron(IV) or iron(V)? Heterolytic or free radical? Oxidation pathways of a TAML activator in acetonitrile at −40 °C. J COORD CHEM 2015. [DOI: 10.1080/00958972.2015.1073270] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Matthew R. Mills
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA, USA
| | - Abigail E. Burton
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA, USA
| | - Dylan I. Mori
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA, USA
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Faponle AS, Quesne MG, Sastri CV, Banse F, de Visser SP. Differences and comparisons of the properties and reactivities of iron(III)-hydroperoxo complexes with saturated coordination sphere. Chemistry 2015; 21:1221-36. [PMID: 25399782 PMCID: PMC4316188 DOI: 10.1002/chem.201404918] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2014] [Indexed: 11/06/2022]
Abstract
Heme and nonheme monoxygenases and dioxygenases catalyze important oxygen atom transfer reactions to substrates in the body. It is now well established that the cytochrome P450 enzymes react through the formation of a high-valent iron(IV)-oxo heme cation radical. Its precursor in the catalytic cycle, the iron(III)-hydroperoxo complex, was tested for catalytic activity and found to be a sluggish oxidant of hydroxylation, epoxidation and sulfoxidation reactions. In a recent twist of events, evidence has emerged of several nonheme iron(III)-hydroperoxo complexes that appear to react with substrates via oxygen atom transfer processes. Although it was not clear from these studies whether the iron(III)-hydroperoxo reacted directly with substrates or that an initial O-O bond cleavage preceded the reaction. Clearly, the catalytic activity of heme and nonheme iron(III)-hydroperoxo complexes is substantially different, but the origins of this are still poorly understood and warrant a detailed analysis. In this work, an extensive computational analysis of aromatic hydroxylation by biomimetic nonheme and heme iron systems is presented, starting from an iron(III)-hydroperoxo complex with pentadentate ligand system (L5(2)). Direct C-O bond formation by an iron(III)-hydroperoxo complex is investigated, as well as the initial heterolytic and homolytic bond cleavage of the hydroperoxo group. The calculations show that [(L5(2))Fe(III)(OOH)](2+) should be able to initiate an aromatic hydroxylation process, although a low-energy homolytic cleavage pathway is only slightly higher in energy. A detailed valence bond and thermochemical analysis rationalizes the differences in chemical reactivity of heme and nonheme iron(III)-hydroperoxo and show that the main reason for this particular nonheme complex to be reactive comes from the fact that they homolytically split the O-O bond, whereas a heterolytic O-O bond breaking in heme iron(III)-hydroperoxo is found.
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Affiliation(s)
- Abayomi S Faponle
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester131 Princess Street, Manchester M1 7DN (UK) E-mail:
| | - Matthew G Quesne
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester131 Princess Street, Manchester M1 7DN (UK) E-mail:
| | - Chivukula V Sastri
- Department of Chemistry, Indian Institute of Technology Guwahati781039, Assam (India)
| | - Frédéric Banse
- Institut de Chimie Moleculaire et des Materiaux d'Orsay, Laboratoire de Chimie Inorganique, Université Paris-Sud11 91405 Orsay Cedex (France) E-mail:
| | - Sam P de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester131 Princess Street, Manchester M1 7DN (UK) E-mail:
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Ji L, Franke A, Brindell M, Oszajca M, Zahl A, van Eldik R. Combined experimental and theoretical study on the reactivity of compounds I and II in horseradish peroxidase biomimetics. Chemistry 2014; 20:14437-50. [PMID: 25220399 DOI: 10.1002/chem.201402347] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2014] [Indexed: 12/21/2022]
Abstract
For the exploration of the intrinsic reactivity of two key active species in the catalytic cycle of horseradish peroxidase (HRP), Compound I (HRP-I) and Compound II (HRP-II), we generated in situ [Fe(IV) O(TMP(+.) )(2-MeIm)](+) and [Fe(IV) O(TMP)(2-MeIm)](0) (TMP=5,10,15,20-tetramesitylporphyrin; 2-MeIm=2-methylimidazole) as biomimetics for HRP-I and HRP-II, respectively. Their catalytic activities in epoxidation, hydrogen abstraction, and heteroatom oxidation reactions were studied in acetonitrile at -15 °C by utilizing rapid-scan UV/Vis spectroscopy. Comparison of the second-order rate constants measured for the direct reactions of the HRP-I and HRP-II mimics with the selected substrates clearly confirmed the outstanding oxidizing capability of the HRP-I mimic, which is significantly higher than that of HRP-II. The experimental study was supported by computational modeling (DFT calculations) of the oxidation mechanism of the selected substrates with the involvement of quartet and doublet HRP-I mimics ((2,4) Cpd I) and the closed-shell triplet spin HRP-II model ((3) Cpd II) as oxidizing species. The significantly lower activation barriers calculated for the oxidation systems involving (2,4) Cpd I than those found for (3) Cpd II are in line with the much higher oxidizing efficiency of the HRP-I mimic proven in the experimental part of the study. In addition, the DFT calculations show that all three reaction types catalyzed by HRP-I occur on the doublet spin surface in an effectively concerted manner, whereas these reactions may proceed in a stepwise mechanism with the HRP-II mimic as oxidant. However, the high desaturation or oxygen rebound barriers during CH bond activation processes by the HRP-II mimic predict a sufficient lifetime for the substrate radical formed through hydrogen abstraction. Thus, the theoretical calculations suggest that the dissociation of the substrate radical may be a more favorable pathway than desaturation or oxygen rebound processes. Importantly, depending on the electronic nature of the oxidizing species, that is, (2,4) Cpd I or (3) Cpd II, an interesting region-selective conversion phenomenon between sulfoxidation and H-atom abstraction was revealed in the course of the oxidation reaction of dimethylsulfide. The combined experimental and theoretical study on the elucidation of the intrinsic reactivity patterns of the HRP-I and HRP-II mimics provides a valuable tool for evaluating the particular role of the HRP active species in biological systems.
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Affiliation(s)
- Li Ji
- Inorganic Chemistry, Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstrasse 1, 91058 Erlangen (Germany); College of Environmental and Resource Sciences, Zhejiang University, Yuhangtang Road 866, Hangzhou 310058 (China)
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30
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The Influence of Structural Parameters on the Reactivity of Model Complexes for Compound II: A Mini Review. Top Catal 2014. [DOI: 10.1007/s11244-014-0256-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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31
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Oszajca M, Drzewiecka-Matuszek A, Franke A, Rutkowska-Zbik D, Brindell M, Witko M, Stochel G, van Eldik R. Mechanistic insight into peroxo-shunt formation of biomimetic models for compound II, their reactivity toward organic substrates, and the influence of N-methylimidazole axial ligation. Chemistry 2014; 20:2328-43. [PMID: 24443188 DOI: 10.1002/chem.201303694] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2013] [Indexed: 11/07/2022]
Abstract
High-valent iron-oxo species have been invoked as reactive intermediates in catalytic cycles of heme and nonheme enzymes. The studies presented herein are devoted to the formation of compound II model complexes, with the application of a water soluble (TMPS)Fe(III)(OH) porphyrin ([meso-tetrakis(2,4,6-trimethyl-3-sulfonatophenyl)porphinato]iron(III) hydroxide) and hydrogen peroxide as oxidant, and their reactivity toward selected organic substrates. The kinetics of the reaction of H2O2 with (TMPS)Fe(III)(OH) was studied as a function of temperature and pressure. The negative values of the activation entropy and activation volume for the formation of (TMPS)Fe(IV)=O(OH) point to the overall associative nature of the process. A pH-dependence study on the formation of (TMPS)Fe(IV)=O(OH) revealed a very high reactivity of OOH(-) toward (TMPS)Fe(III)(OH) in comparison to H2O2. The influence of N-methylimidazole (N-MeIm) ligation on both the formation of iron(IV)-oxo species and their oxidising properties in the reactions with 4-methoxybenzyl alcohol or 4-methoxybenzaldehyde, was investigated in detail. Combined experimental and theoretical studies revealed that among the studied complexes, (TMPS)Fe(III)(H2O)(N-MeIm) is highly reactive toward H2O2 to form the iron(IV)-oxo species, (TMPS)Fe(IV)=O(N-MeIm). The latter species can also be formed in the reaction of (TMPS)Fe(III)(N-MeIm)2 with H2O2 or in the direct reaction of (TMPS)Fe(IV)=O(OH) with N-MeIm. Interestingly, the kinetic studies involving substrate oxidation by (TMPS)Fe(IV)=O(OH) and (TMPS)Fe(IV)=O(N-MeIm) do not display a pronounced effect of the N-MeIm axial ligand on the reactivity of the compound II mimic in comparison to the OH(-) substituted analogue. Similarly, DFT computations revealed that the presence of an axial ligand (OH(-) or N-MeIm) in the trans position to the oxo group in the iron(IV)-oxo species does not significantly affect the activation barriers calculated for C-H dehydrogenation of the selected organic substrates.
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Affiliation(s)
- Maria Oszajca
- Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060 Krakow (Poland); Department of Chemistry and Pharmacy, University of Erlangen-Nürnberg, Egerlandstrasse 1, 91058 Erlangen (Germany)
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32
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Oszajca M, Franke A, Drzewiecka-Matuszek A, Brindell M, Stochel G, van Eldik R. Temperature and pressure effects on C-H abstraction reactions involving compound I and II mimics in aqueous solution. Inorg Chem 2014; 53:2848-57. [PMID: 24392857 DOI: 10.1021/ic402567h] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
The presented results cover a comparative mechanistic study on the reactivity of compound (Cpd) I and II mimics of a water-soluble iron(III) porphyrin, [meso-tetrakis(2,4,6-trimethyl-3-sulfonatophenyl)porphinato]iron(III), Fe(III)(TMPS). The acidity of the aqueous medium strongly controls the chemical nature and stability of the high-valent iron(IV) oxo species. Reactivity studies were performed at pH 5 and 10, where the Cpd I and II mimics are stabilized as the sole oxidizing species, respectively. The contributions of ΔH(‡) and ΔS(‡) to the free energy of activation (ΔG(‡)) for the oxidation of 4-methoxybenzaldehyde (4-MB-ald), 4-methoxybenzyl alcohol (4-MB-alc), and 1-phenylethanol (1-PhEtOH) by the Cpd I and II mimics were determined. The relatively large contribution of the ΔH(‡) term in comparison to the -TΔS(‡) term to ΔG(‡) for reactions involving the Cpd II mimic indicates that the oxidation of selected substrates by this oxidizing species is clearly an enthalpy-controlled process. In contrast, different results were found for reactions with application of the Cpd I mimic. Depending on the nature of the substrate, the reaction at room temperature can be entropy-controlled, as found for the oxidation of 4-MB-alc, or enthalpy-controlled, as found for 1-PhEtOH. Importantly, for the first time, activation volumes (ΔV(‡)) for the oxidation of selected substrates by both reactive intermediates could be determined. Positive values of ΔV(‡) were found for reactions with the Cpd II mimic and slightly negative ones for reactions with the Cpd II mimic. The results are discussed in the context of the oxidation mechanism conducted by the Cpd I and II mimics.
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Affiliation(s)
- Maria Oszajca
- Faculty of Chemistry, Jagiellonian University , Ingardena 3, 30-060 Krakow, Poland
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33
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Ueda T, Kitagishi H, Kano K. Intramolecular Direct Oxygen Transfer from Oxoferryl Porphyrin to a Sulfide Bond. Inorg Chem 2013; 53:543-51. [DOI: 10.1021/ic4026393] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Takunori Ueda
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
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Kim D, Cho J, Lee YM, Sarangi R, Nam W. Synthesis, characterization, and reactivity of cobalt(III)-oxygen complexes bearing a macrocyclic N-tetramethylated cyclam ligand. Chemistry 2013; 19:14112-8. [PMID: 24038300 PMCID: PMC3928501 DOI: 10.1002/chem.201300107] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2013] [Revised: 07/08/2013] [Indexed: 11/11/2022]
Abstract
Mononuclear metal-dioxygen species are key intermediates that are frequently observed in the catalytic cycles of dioxygen activation by metalloenzymes and their biomimetic compounds. In this work, a side-on cobalt(III)-peroxo complex bearing a macrocyclic N-tetramethylated cyclam (TMC) ligand, [Co(III) (15-TMC)(O2 )](+) , was synthesized and characterized with various spectroscopic methods. Upon protonation, this cobalt(III)-peroxo complex was cleanly converted into an end-on cobalt(III)-hydroperoxo complex, [Co(III) (15-TMC)(OOH)](2+) . The cobalt(III)-hydroperoxo complex was further converted to [Co(III) (15-TMC-CH2 -O)](2+) by hydroxylation of a methyl group of the 15-TMC ligand. Kinetic studies and (18) O-labeling experiments proposed that the aliphatic hydroxylation occurred via a Co(IV) -oxo (or Co(III) -oxyl) species, which was formed by OO bond homolysis of the cobalt(III)-hydroperoxo complex. In conclusion, we have shown the synthesis, structural and spectroscopic characterization, and reactivities of mononuclear cobalt complexes with peroxo, hydroperoxo, and oxo ligands.
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Affiliation(s)
- Doyeon Kim
- Department of Bioinspired Science, Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (South Korea)
| | - Jaeheung Cho
- Department of Bioinspired Science, Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (South Korea)
- Department of Emerging Materials Science, DGIST, Daegu 711-873 (South Korea)
| | - Yong-Min Lee
- Department of Bioinspired Science, Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (South Korea)
| | - Ritimukta Sarangi
- Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94025 (USA)
| | - Wonwoo Nam
- Department of Bioinspired Science, Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (South Korea)
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35
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Yoon H, Lee YM, Wu X, Cho KB, Sarangi R, Nam W, Fukuzumi S. Enhanced electron-transfer reactivity of nonheme manganese(IV)-oxo complexes by binding scandium ions. J Am Chem Soc 2013; 135:9186-94. [PMID: 23742163 PMCID: PMC3934761 DOI: 10.1021/ja403965h] [Citation(s) in RCA: 116] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
One and two scandium ions (Sc(3+)) are bound strongly to nonheme manganese(IV)-oxo complexes, [(N4Py)Mn(IV)(O)](2+) (N4Py = N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) and [(Bn-TPEN)Mn(IV)(O)](2+) (Bn-TPEN = N-benzyl-N,N',N'-tris(2-pyridylmethyl)-1,2-diaminoethane), to form Mn(IV)(O)-(Sc(3+))1 and Mn(IV)(O)-(Sc(3+))2 complexes, respectively. The binding of Sc(3+) ions to the Mn(IV)(O) complexes was examined by spectroscopic methods as well as by DFT calculations. The one-electron reduction potentials of the Mn(IV)(O) complexes were markedly shifted to a positive direction by binding of Sc(3+) ions. Accordingly, rates of the electron transfer reactions of the Mn(IV)(O) complexes were enhanced as much as 10(7)-fold by binding of two Sc(3+) ions. The driving force dependence of electron transfer from various electron donors to the Mn(IV)(O) and Mn(IV)(O)-(Sc(3+))2 complexes was examined and analyzed in light of the Marcus theory of electron transfer to determine the reorganization energies of electron transfer. The smaller reorganization energies and much more positive reduction potentials of the Mn(IV)(O)-(Sc(3+))2 complexes resulted in remarkable enhancement of the electron-transfer reactivity of the Mn(IV)(O) complexes. Such a dramatic enhancement of the electron-transfer reactivity of the Mn(IV)(O) complexes by binding of Sc(3+) ions resulted in the change of mechanism in the sulfoxidation of thioanisoles by Mn(IV)(O) complexes from a direct oxygen atom transfer pathway without metal ion binding to an electron-transfer pathway with binding of Sc(3+) ions.
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Affiliation(s)
- Heejung Yoon
- Department of Material and Life Science, Graduate School of Engineering, ALCA, Japan Science and Technology Agency (JST), Osaka University, Suita, Osaka 565-0871, Japan
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Yong-Min Lee
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Xiujuan Wu
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Kyung-Bin Cho
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Ritimukta Sarangi
- Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Wonwoo Nam
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Shunichi Fukuzumi
- Department of Material and Life Science, Graduate School of Engineering, ALCA, Japan Science and Technology Agency (JST), Osaka University, Suita, Osaka 565-0871, Japan
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
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36
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Domine F, Bock J, Voisin D, Donaldson DJ. Can We Model Snow Photochemistry? Problems with the Current Approaches. J Phys Chem A 2013; 117:4733-49. [DOI: 10.1021/jp3123314] [Citation(s) in RCA: 59] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Florent Domine
- Takuvik Joint International
Laboratory, Université Laval (Canada) and CNRS (France), Pavillon Alexandre Vachon, 1045 Avenue de
La Médecine, Québec, QC G1V 0A6, Canada
- Department of Chemistry, Université Laval, Pavillon Alexandre Vachon,
1045 Avenue de La Médecine, Québec, QC G1V 0A6, Canada
| | - Josué Bock
- Université Joseph Fourier−Grenoble
1/CNRS, Laboratoire de Glaciologie et Géophysique de l’Environnement, UMR 5183, Grenoble, F-38041, France
| | - Didier Voisin
- Université Joseph Fourier−Grenoble
1/CNRS, Laboratoire de Glaciologie et Géophysique de l’Environnement, UMR 5183, Grenoble, F-38041, France
| | - D. J. Donaldson
- Department of Chemistry, University of Toronto, and Department of Physical and
Environmental Sciences, University of Toronto Scarborough, Scarborough, Toronto, ON, Canada
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37
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Chatterjee D, Rothbart S, van Eldik R. Substrate versus oxidant activation in RuIII(edta) catalyzed dye degradation. RSC Adv 2013. [DOI: 10.1039/c2ra22810f] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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38
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Chatterjee D, Rothbart S, van Eldik R. Selective oxidation of thiourea with H2O2 catalyzed by [RuIII(edta)(H2O)]−: kinetic and mechanistic studies. Dalton Trans 2013; 42:4725-9. [DOI: 10.1039/c3dt32737j] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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39
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Chatterjee D, Paul B, Mukherjee R. Oxidation of thiocyanate with H2O2 catalyzed by [RuIII(edta)(H2O)]−. Dalton Trans 2013; 42:10056-60. [DOI: 10.1039/c3dt50723h] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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40
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Franke A, Fertinger C, van Eldik R. Axial Ligand and Spin-State Influence on the Formation and Reactivity of Hydroperoxo-Iron(III) Porphyrin Complexes. Chemistry 2012; 18:6935-49. [DOI: 10.1002/chem.201103036] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2011] [Revised: 12/29/2011] [Indexed: 11/12/2022]
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41
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Park J, Morimoto Y, Lee YM, Nam W, Fukuzumi S. Proton-Promoted Oxygen Atom Transfer vs Proton-Coupled Electron Transfer of a Non-Heme Iron(IV)-Oxo Complex. J Am Chem Soc 2012; 134:3903-11. [DOI: 10.1021/ja211641s] [Citation(s) in RCA: 76] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jiyun Park
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Yuma Morimoto
- Department of Material and Life
Science, Graduate School of Engineering, Osaka University, ALCA, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871,
Japan
| | - Yong-Min Lee
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Wonwoo Nam
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Shunichi Fukuzumi
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
- Department of Material and Life
Science, Graduate School of Engineering, Osaka University, ALCA, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871,
Japan
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42
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Mechanistic insight from thermal activation parameters for oxygenation reactions of different substrates with biomimetic iron porphyrin models for compounds I and II. J Biol Inorg Chem 2011; 17:27-36. [DOI: 10.1007/s00775-011-0822-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2011] [Accepted: 07/07/2011] [Indexed: 10/17/2022]
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43
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Park J, Morimoto Y, Lee YM, Nam W, Fukuzumi S. Metal Ion Effect on the Switch of Mechanism from Direct Oxygen Transfer to Metal Ion-Coupled Electron Transfer in the Sulfoxidation of Thioanisoles by a Non-Heme Iron(IV)−Oxo Complex. J Am Chem Soc 2011; 133:5236-9. [DOI: 10.1021/ja200901n] [Citation(s) in RCA: 151] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jiyun Park
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Yuma Morimoto
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
| | - Yong-Min Lee
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Wonwoo Nam
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
| | - Shunichi Fukuzumi
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
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44
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Company A, Prat I, Frisch JR, Ballesté RM, Güell M, Juhász G, Ribas X, Münck E, Luis JM, Que L, Costas M. Modeling the cis-oxo-labile binding site motif of non-heme iron oxygenases: water exchange and oxidation reactivity of a non-heme iron(IV)-oxo compound bearing a tripodal tetradentate ligand. Chemistry 2011; 17:1622-34. [PMID: 21268165 PMCID: PMC3097279 DOI: 10.1002/chem.201002297] [Citation(s) in RCA: 96] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2010] [Indexed: 11/11/2022]
Abstract
The spectroscopic and chemical characterization of a new synthetic non-heme iron(IV)-oxo species [Fe(IV)(O)((Me,H) Pytacn)(S)](2+) (2, (Me,H)Pytacn=1-(2'-pyridylmethyl)-4,7-dimethyl-1,4,7-triazacyclononane, S=CH(3)CN or H(2)O) is described. Complex 2 was prepared by reaction of [Fe(II)(CF(3)SO(3))(2)((Me,H) Pytacn)] (1) with peracetic acid. Complex 2 bears a tetradentate N(4) ligand that leaves two cis sites available for binding an oxo group and a second external ligand but, unlike the related iron(IV)-oxo species with tetradentate ligands, it is remarkably stable at room temperature (t(1/2)>2 h at 288 K). Its ability to exchange the oxygen atom of the oxo ligand with water has been analyzed in detail by means of kinetic studies, and a mechanism is proposed on the basis of DFT calculations. Hydrogen-atom abstraction from C-H bonds and oxygen-atom transfer to sulfides by 2 have also been studied. Despite its thermal stability, 2 proves to be a very powerful oxidant that is capable of breaking the strong C-H bond of cyclohexane (bond dissociation energy=99.3 kcal mol(-1)).
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Affiliation(s)
- Anna Company
- Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia (Spain), Fax: +34 972 41 81 50
| | - Irene Prat
- Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia (Spain), Fax: +34 972 41 81 50
| | - Jonathan R. Frisch
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455 (USA)
| | - Ruben Mas Ballesté
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455 (USA)
| | - Mireia Güell
- Institut de Química Computacional, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia (Spain)
| | - Gergely Juhász
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213
| | - Xavi Ribas
- Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia (Spain), Fax: +34 972 41 81 50
| | - Eckard Münck
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213
| | - Josep M. Luis
- Institut de Química Computacional, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia (Spain)
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455 (USA)
| | - Miquel Costas
- Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia (Spain), Fax: +34 972 41 81 50
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45
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Chatterjee D, Ember E, Pal U, Ghosh S, van Eldik R. Remarkably high catalytic activity of the RuIII(edta)/H2O2 system towards degradation of the azo-dye Orange II. Dalton Trans 2011; 40:10473-80. [DOI: 10.1039/c1dt10483g] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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46
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Jin N, Lahaye DE, Groves JT. A “Push−Pull” Mechanism for Heterolytic O−O Bond Cleavage in Hydroperoxo Manganese Porphyrins. Inorg Chem 2010; 49:11516-24. [DOI: 10.1021/ic1015274] [Citation(s) in RCA: 81] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ning Jin
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Dorothée E. Lahaye
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - John T. Groves
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
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47
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Han Y, Lee YM, Mariappan M, Fukuzumi S, Nam W. Manganese(V)-oxo corroles in hydride-transfer reactions. Chem Commun (Camb) 2010; 46:8160-2. [PMID: 20936230 DOI: 10.1039/c0cc03373a] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydride transfer from dihydronicotinamide adenine dinucleotide (NADH) analogues to manganese(V)-oxo corroles proceeds via proton-coupled electron transfer, followed by rapid electron transfer. The redox potentials (E(red)) of manganese(V)-oxo corroles exhibit a good correlation with their reactivity in hydride-transfer reactions.
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Affiliation(s)
- Yejee Han
- Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, Korea
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48
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Active intermediates in heme monooxygenase reactions as revealed by cryoreduction/annealing, EPR/ENDOR studies. Arch Biochem Biophys 2010; 507:36-43. [PMID: 20854788 DOI: 10.1016/j.abb.2010.09.013] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2010] [Revised: 09/13/2010] [Accepted: 09/14/2010] [Indexed: 11/21/2022]
Abstract
This review describes the use of cryoreduction/annealing EPR/ENDOR techniques for determining the active oxidizing species in reactions catalyzed by heme monooxygenases. The three candidate heme states are: ferric peroxo, ferric hydroperoxo and compound I intermediates. The enzymes discussed include cytochromes P450, nitric oxide synthase and heme oxygenase.
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Wang D, Zhang M, Bühlmann P, Que L. Redox potential and C-H bond cleaving properties of a nonheme Fe(IV)=O complex in aqueous solution. J Am Chem Soc 2010; 132:7638-44. [PMID: 20476758 DOI: 10.1021/ja909923w] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
High-valent iron-oxo intermediates have been identified as the key oxidants in the catalytic cycles of many nonheme enzymes. Among the large number of synthetic Fe(IV)=O complexes characterized to date, [Fe(IV)(O)(N4Py)](2+) (1) exhibits the unique combination of thermodynamic stability, allowing its structural characterization by X-ray crystallography, and oxidative reactivity sufficient to cleave C-H bonds as strong as those in cyclohexane (D(C-H) = 99.3 kcal mol(-1)). However, its redox properties are not yet well understood. In this work, the effect of protons on the redox properties of 1 has been investigated electrochemically in nonaqueous and aqueous solutions. While the cyclic voltammetry of 1 in CH(3)CN is complicated by coupling of several chemical and redox processes, the Fe(IV/III) couple is reversible in aqueous solution with E(1/2) = +0.41 V versus SCE at pH 4 and involves the transfer of one electron and one proton to give the Fe(III)-OH species. This is in fact the first example of reversible electrochemistry to be observed for this family of nonheme oxoiron (IV) complexes. C-H bond oxidations by 1 have been studied in H(2)O and found to have reaction rates that depend on the C-H bond strength but not on the solvent. Furthermore, our electrochemical results have allowed a D(O-H) value of 78(2) kcal mol(-1) to be calculated for the Fe(III)-OH unit derived from 1. Interestingly, although this D(O-H) value is 6-11 kcal mol(-1) lower than those corresponding to oxidants such as [Fe(IV)(O)(TMP)] (TMP = tetramesitylporphinate), [Ru(IV)(O)(bpy)(2)(py)](2+) (bpy = bipyridine, py = pyridine), and the tert-butylperoxyl radical, the oxidation of dihydroanthracene by 1 occurs at a rate comparable to rates for these other oxidants. This comparison suggests that the nonheme N4Py ligand environment confers a kinetic advantage over the others that enhances the C-H bond cleavage ability of 1.
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Affiliation(s)
- Dong Wang
- Department of Chemistry, University of Minnesota, Minneapolis, Minnesota 55455, USA
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Han W, Mayer P, Ofial A. Iron-Catalyzed Oxidative Mono- and Bis-Phosphonation of N,N-Dialkylanilines. Adv Synth Catal 2010. [DOI: 10.1002/adsc.201000092] [Citation(s) in RCA: 114] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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