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Rapp M, Margas-Musielak K, Kaczmarek P, Witkowska A, Cytlak T, Siodła T, Koroniak H. Highly Diastereoselective Construction of Carbon- Heteroatom Quaternary Stereogenic Centers in the Synthesis of Analogs of Bioactive Compounds: From Monofluorinated Epoxyalkylphosphonates to α-Fluoro-, β-, or γ-Amino Alcohol Derivatives of Alkylphosphonates. Front Chem 2021; 9:613633. [PMID: 34150715 PMCID: PMC8208234 DOI: 10.3389/fchem.2021.613633] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Accepted: 03/26/2021] [Indexed: 11/25/2022] Open
Abstract
The synthesis of the stable surrogates of an important amino acid (R)-4-amino-3-hydroxybutyric acid (GABOB) such as substituted hydroxy aminophosphonic acids bearing a quaternary stereogenic center is presented. Highly diastereoselective formations of fluorinated spiroepoxy alkylphosphonate or related tertiary carbon-containing oxiranes from β-keto phosphonates possessing methyl, phenyl, or cyclohexenyl substituents, are reported. Stereoselective acid-promoted epoxide opening by bromide or azide followed by reduction/protection afforded tertiary bromides or N-Boc derivatives of β-amino-γ-hydroxy alkylphosphonates in most cases, while the reactions of oxiranes with different amines yielded their β-hydroxy-γ-amino regioisomers. Surprisingly, during the synthesis of amino phosphonic acids, we observe that the acid-induced rearrangement proceeded in a high diastereospecific manner, leading finally to substituted β-hydroxy-γ-aminoalkylphosphonic acids.
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Affiliation(s)
- Magdalena Rapp
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Poznań, Poland
| | | | - Patrycja Kaczmarek
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Poznań, Poland
| | | | - Tomasz Cytlak
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Poznań, Poland
- Centre for Advanced Technologies Adam Mickiewicz University in Poznań, Poznań, Poland
| | - Tomasz Siodła
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Poznań, Poland
| | - Henryk Koroniak
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Poznań, Poland
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2
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Murru S, Mokar BD, Bista R, Harakat D, Le Bras J, Fronczek F, Nicholas KM, Srivastava RS. Copper-catalyzed asymmetric allylic C–H amination of alkenes using N-arylhydroxylamines. Org Chem Front 2021. [DOI: 10.1039/d1qo00223f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
The first Cu-catalyzed asymmetric allylic C–H amination of alkenes with N-aryl hydroxylamines has been developed. Metal-complexes isolation, ESI-MS analysis and the DFT calculations provided key insights on mechanistic pathway.
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Affiliation(s)
- Siva Murru
- Chemistry Program
- School of Sciences
- University of Louisiana at Monroe
- Louisiana 71209
- USA
| | - Bhanudas D. Mokar
- Department of Chemistry
- University of Louisiana at Lafayette
- Louisiana 70504
- USA
| | - Ramesh Bista
- Chemistry Program
- School of Sciences
- University of Louisiana at Monroe
- Louisiana 71209
- USA
| | - Dominique Harakat
- Institut de Chimie Moléculaire de Reims – UMR 7312 CNRS-Université de Reims Champagne-Ardenne UFR des Sciences Exactes et Naturelles
- 51687 REIMS Cedex 2
- France
| | - Jean Le Bras
- Institut de Chimie Moléculaire de Reims – UMR 7312 CNRS-Université de Reims Champagne-Ardenne UFR des Sciences Exactes et Naturelles
- 51687 REIMS Cedex 2
- France
| | - Frank Fronczek
- Department of Chemistry
- Louisiana State University
- Baton Rouge 70803
- USA
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3
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Dabur M, Loureiro JA, Pereira MC. Fluorinated Molecules and Nanotechnology: Future 'Avengers' against the Alzheimer's Disease? Int J Mol Sci 2020; 21:ijms21082989. [PMID: 32340267 PMCID: PMC7216102 DOI: 10.3390/ijms21082989] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2020] [Revised: 04/20/2020] [Accepted: 04/21/2020] [Indexed: 01/21/2023] Open
Abstract
Alzheimer’s disease (AD) is a serious health concern, affecting millions of people globally, which leads to cognitive impairment, dementia, and inevitable death. There is still no medically accepted treatment for AD. Developing therapeutic treatments for AD is an overwhelming challenge in the medicinal field, as the exact mechanics underlying its devastating symptoms is still not completely understood. Rather than the unknown mechanism of the disease, one of the limiting factors in developing new drugs for AD is the blood–brain barrier (BBB). A combination of nanotechnology with fluorinated molecules is proposed as a promising therapeutic treatment to meet the desired pharmacokinetic/physiochemical properties for crossing the BBB passage. This paper reviews the research conducted on fluorine-containing compounds and fluorinated nanoparticles (NPs) that have been designed and tested for the inhibition of amyloid-beta (Aβ) peptide aggregation. Additionally, this study summarizes fluorinated molecules and NPs as promising agents and further future work is encouraged to be effective for the treatment of AD.
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Fesenko AA, Yankov AN, Shutalev AD. A general and convenient synthesis of 4-(tosylmethyl)semicarbazones and their use in amidoalkylation of hydrogen, heteroatom, and carbon nucleophiles. Tetrahedron 2019. [DOI: 10.1016/j.tet.2019.130527] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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Rapolu RK, Areveli S, Raju VVNKVP, Navuluri S, Chavali M, Mulakayala N. An Efficient Synthesis of Darunavir Substantially Free from Impurities: Synthesis and Characterization of Novel Impurities. ChemistrySelect 2019. [DOI: 10.1002/slct.201803825] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Rajesh Kumar Rapolu
- Granules India Limited – R&D Center, Plot No.56 Road No.5, ALEAP Industrial Area, Pragathinagar Hyderabad 5000072 India
- Department of ChemistryDepartment of Sciences and HumanitiesVignan's Foundation for Science, Technology and Research (VFSTR) Guntur 522 213 India
| | - Srinivas Areveli
- Granules India Limited – R&D Center, Plot No.56 Road No.5, ALEAP Industrial Area, Pragathinagar Hyderabad 5000072 India
| | - V. V. N. K. V. Prasada Raju
- Granules India Limited – R&D Center, Plot No.56 Road No.5, ALEAP Industrial Area, Pragathinagar Hyderabad 5000072 India
| | - Srinivasu Navuluri
- Department of ChemistryDepartment of Sciences and HumanitiesVignan's Foundation for Science, Technology and Research (VFSTR) Guntur 522 213 India
| | - Murthy Chavali
- Department of ChemistryDepartment of Sciences and HumanitiesVignan's Foundation for Science, Technology and Research (VFSTR) Guntur 522 213 India
- Shree Velagapudi Ramakrishna Memorial College (SVRMC; Autonomous) Nagaram 522 268 Guntur District, Andhra Pradesh INDIA
- MCETRC, Tenali Guntur 522 201, Andhra Pradesh INDIA
| | - Naveen Mulakayala
- SVAK Life sciencesALEAP Industrial area, Pragathinagar Hyderabad 500090 India
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6
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Tresadern G, Rombouts FJR, Oehlrich D, Macdonald G, Trabanco AA. Industrial medicinal chemistry insights: neuroscience hit generation at Janssen. Drug Discov Today 2017; 22:1478-1488. [PMID: 28669605 DOI: 10.1016/j.drudis.2017.05.013] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2017] [Revised: 05/18/2017] [Accepted: 05/25/2017] [Indexed: 12/16/2022]
Abstract
The role of medicinal chemistry has changed over the past 10 years. Chemistry had become one step in a process; funneling the output of high-throughput screening (HTS) on to the next stage. The goal to identify the ideal clinical compound remains, but the means to achieve this have changed. Modern medicinal chemistry is responsible for integrating innovation throughout early drug discovery, including new screening paradigms, computational approaches, novel synthetic chemistry, gene-family screening, investigating routes of delivery, and so on. In this Foundation Review, we show how a successful medicinal chemistry team has a broad impact and requires multidisciplinary expertise in these areas.
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Affiliation(s)
- Gary Tresadern
- Discovery Sciences, Janssen Research & Development, C/ Jarama 75A, 45007 Toledo, Spain.
| | - Frederik J R Rombouts
- Neuroscience Medicinal Chemistry, Janssen Research & Development, Turnhoutseweg 30, B-2340 Beerse, Belgium
| | - Daniel Oehlrich
- Neuroscience Medicinal Chemistry, Janssen Research & Development, Turnhoutseweg 30, B-2340 Beerse, Belgium
| | - Gregor Macdonald
- Neuroscience Medicinal Chemistry, Janssen Research & Development, Turnhoutseweg 30, B-2340 Beerse, Belgium
| | - Andres A Trabanco
- Neuroscience Medicinal Chemistry, Janssen Research & Development, C/ Jarama 75A, 45007 Toledo, Spain.
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Ciordia M, Pérez-Benito L, Delgado F, Trabanco AA, Tresadern G. Application of Free Energy Perturbation for the Design of BACE1 Inhibitors. J Chem Inf Model 2016; 56:1856-71. [PMID: 27500414 DOI: 10.1021/acs.jcim.6b00220] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Novel spiroaminodihydropyrroles probing for optimized interactions at the P3 pocket of β-secretase 1 (BACE1) were designed with the use of free energy perturbation (FEP) calculations. The resulting molecules showed pIC50 potencies in enzymatic BACE1 inhibition assays ranging from approximately 5 to 7. Good correlation was observed between the predicted activity from the FEP calculations and experimental activity. Simulations run with a default 5 ns approach delivered a mean unsigned error (MUE) between prediction and experiment of 0.58 and 0.91 kcal/mol for retrospective and prospective applications, respectively. With longer simulations of 10 and 20 ns, the MUE was in both cases 0.57 kcal/mol for the retrospective application, and 0.69 and 0.59 kcal/mol for the prospective application. Other considerations that impact the quality of the calculations are discussed. This work provides an example of the value of FEP as a computational tool for drug discovery.
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Affiliation(s)
- Myriam Ciordia
- Janssen Research and Development , c/Jarama 75A, 45007 Toledo, Spain.,Departamento de Química y Bioquímica, Facultad de Farmacia, Universidad CEU San Pablo , Urbanización Montepríncipe Ctra., Boadilla del Monte Km 5.3, 28668 Madrid, Spain
| | - Laura Pérez-Benito
- Janssen Research and Development , c/Jarama 75A, 45007 Toledo, Spain.,Laboratori de Medicina Computacional Unitat de Bioestadistica, Facultat de Medicina, Universitat Autonoma de Barcelona , 08193 Bellaterra, Spain
| | - Francisca Delgado
- Janssen Research and Development , c/Jarama 75A, 45007 Toledo, Spain
| | - Andrés A Trabanco
- Janssen Research and Development , c/Jarama 75A, 45007 Toledo, Spain
| | - Gary Tresadern
- Janssen Research and Development , c/Jarama 75A, 45007 Toledo, Spain
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Synthesis of Chiral, Enantiopure Allylic Amines by the Julia Olefination of α-Amino Esters. Molecules 2016; 21:molecules21060805. [PMID: 27338326 PMCID: PMC6273449 DOI: 10.3390/molecules21060805] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2016] [Revised: 06/14/2016] [Accepted: 06/14/2016] [Indexed: 11/17/2022] Open
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9
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Mateu N, Ciordia M, Delgado O, Sánchez-Roselló M, Trabanco AA, Van Gool M, Tresadern G, Pérez-Benito L, Fustero S. A Versatile Approach to CF3-Containing 2-Pyrrolidones by Tandem Michael Addition-Cyclization: Exemplification in the Synthesis of Amidine Class BACE1 Inhibitors. Chemistry 2015; 21:11719-26. [DOI: 10.1002/chem.201501662] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2015] [Indexed: 12/19/2022]
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Cioc RC, van der Niet DJH, Janssen E, Ruijter E, Orru RVA. One-Pot Synthesis of N-Substituted β-Amino Alcohols from Aldehydes and Isocyanides. Chemistry 2015; 21:7808-13. [PMID: 25868115 DOI: 10.1002/chem.201500210] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2015] [Indexed: 12/12/2022]
Abstract
A practical two-stage one-pot synthesis of N-substituted β-amino alcohols using aldehydes and isocyanides as starting materials has been developed. This method features mild reaction conditions, broad scope, and general tolerance of functional groups. Based on a less common central carbon-carbon bond disconnection, this protocol complements traditional approaches that involve amines and various carbon electrophiles (epoxides, α-halo ketones, β-halohydrins). Medicinally relevant products can be prepared in a concise and efficient way from simple building blocks, as demonstrated in the synthesis of the antiasthma drug salbutamol. Upgrading the synthesis to an enantioselective variant is also feasible.
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Affiliation(s)
- Răzvan C Cioc
- Department of Chemistry & Pharmaceutical Sciences and Amsterdam Institute for Molecules Medicines and Systems (AIMMS), VU University Amsterdam, De Boelelaan 1083, 1081 HV Amsterdam (The Netherlands)
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Novel approach to stereoselective synthesis of (E)/(Z)-(N-acyl-oxazolidinone)-eneglycinates. RESEARCH ON CHEMICAL INTERMEDIATES 2015. [DOI: 10.1007/s11164-013-1225-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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12
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Grellepois F. Enantiopure Trifluoromethylated β3,3-Amino Acids: Synthesis by Asymmetric Reformatsky Reaction with Stable Analogues of Trifluoromethyl N-tert-Butanesulfinylketoimines and Incorporation into α/β-Peptides. J Org Chem 2013; 78:1127-37. [DOI: 10.1021/jo302549v] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Fabienne Grellepois
- Université de Reims Champagne-Ardenne, Institut de Chimie Moléculaire
de Reims, CNRS UMR 7312,
UFR des Sciences Exactes et Naturelles, BP 1039, 51687 Reims Cedex
2, France
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13
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Liu Y, Liu J, Huang Y, Qing FL. Lewis acid-catalyzed regioselective synthesis of chiral α-fluoroalkyl amines via asymmetric addition of silyl dienolates to fluorinated sulfinylimines. Chem Commun (Camb) 2013; 49:7492-4. [DOI: 10.1039/c3cc43741h] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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