1
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Paul I, Valiyev I, Ghosh A, Schmittel M. Dynamic negative allosteric effect: regulation of catalysis via multicomponent rotor speed. Chem Commun (Camb) 2024; 60:7085-7088. [PMID: 38896476 DOI: 10.1039/d4cc02144d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
Nanorotor R1 (420 kHz) was assembled from five components utilizing three orthogonal interactions. Post-modification at the distal position generated the advanced six component rotor R2 (45 kHz). The decrease in R2 speed leads to the inhibition of a three-component reaction by reducing catalyst release.
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Affiliation(s)
- Indrajit Paul
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, School of Science and Technology, University of Siegen, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany.
| | - Isa Valiyev
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, School of Science and Technology, University of Siegen, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany.
| | - Amit Ghosh
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, School of Science and Technology, University of Siegen, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany.
| | - Michael Schmittel
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, School of Science and Technology, University of Siegen, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany.
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2
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Harada K, Ono Y, Sekiya R, Haino T. Selective encapsulation of carboxylic acid dimers within a size-regulable resorcinarene-based hemicarcerand. Chem Commun (Camb) 2024; 60:6603-6606. [PMID: 38836696 DOI: 10.1039/d4cc00699b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2024]
Abstract
A cavity within a resorcinarene-based hemicarcerand was contracted and expanded through conformational changes induced by the complexation and decomplexation, allowing self-sorting of homo- and heterodimeric carboxylic acid pairs.
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Affiliation(s)
- Kentaro Harada
- Department of Chemistry, Graduate School of Advanced Science and Engineering Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8526, Japan.
| | - Yudai Ono
- Department of Chemistry, Graduate School of Advanced Science and Engineering Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8526, Japan.
- International Institute for Sustainability with Knotted Chiral Meta Matter (WPI-SKCM2), Hiroshima University, 2-313 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-0046, Japan
| | - Ryo Sekiya
- Department of Chemistry, Graduate School of Advanced Science and Engineering Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8526, Japan.
| | - Takeharu Haino
- Department of Chemistry, Graduate School of Advanced Science and Engineering Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8526, Japan.
- International Institute for Sustainability with Knotted Chiral Meta Matter (WPI-SKCM2), Hiroshima University, 2-313 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-0046, Japan
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3
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Kimura Y, Matsumura K, Ono K, Tsuchido Y, Kawai H. Recognition of Amino Acid Salts by Temperature-Dependent Allosteric Binding with Stereodynamic Urea Receptors. Chemistry 2024; 30:e202400154. [PMID: 38488291 DOI: 10.1002/chem.202400154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Indexed: 04/11/2024]
Abstract
Positive homotropic artificial allosteric systems are important for the regulation of cooperativity, selectivity and nonlinear amplification. Stereodynamic homotropic allosteric receptors can transmit and amplify induced chirality by the first ligand binding to axial chirality between two chromophores. We herein report stereodynamic allosteric urea receptors consisting of a rotational shaft as the axial chirality unit, terphenyl units as structural transmission sites and four urea units as binding sites. NMR titration experiments revealed that the receptor can bind two carboxylate guests in a positive homotropic allosteric manner attributed to the inactivation by intramolecular hydrogen-bonding between urea units within the receptor. In addition, the VT-CD spectra observed upon binding of the urea receptor with l- or D-amino acid salts in MeCN showed interesting temperature-dependent Cotton effects, based on the differences of the receptor shaft unit and the guest structure. The successful discrimination of hydrocarbon-based side chains of amino acid salts indicated that the input of chiral and steric information for the guest was amplified as outputs of the Cotton effect and the temperature-dependence of VT-CD spectra through cooperativity of positive allosteric binding.
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Affiliation(s)
- Yuki Kimura
- Department of Chemistry, Faculty of Science, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo, 162-8601, Japan
| | - Kotaro Matsumura
- Department of Chemistry, Faculty of Science, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo, 162-8601, Japan
| | - Kosuke Ono
- School of Science, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo, 152-8551, Japan
| | - Yoshitaka Tsuchido
- Department of Chemistry, Faculty of Science, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo, 162-8601, Japan
| | - Hidetoshi Kawai
- Department of Chemistry, Faculty of Science, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo, 162-8601, Japan
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4
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Lu H, Ye H, You L. Photoswitchable Cascades for Allosteric and Bidirectional Control over Covalent Bonds and Assemblies. J Am Chem Soc 2024. [PMID: 38620077 DOI: 10.1021/jacs.4c01240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/17/2024]
Abstract
Studies of complex systems and emerging properties to mimic biosystems are at the forefront of chemical research. Dynamic multistep cascades, especially those exhibiting allosteric regulation, are challenging. Herein, we demonstrate a versatile platform of photoswitchable covalent cascades toward remote and bidirectional control of reversible covalent bonds and ensuing assemblies. The relay of a photochromic switch, keto-enol equilibrium, and ring-chain equilibrium allows light-mediated reversible allosteric structural changes. The accompanying distinct reactivity further enables photoswitchable dynamic covalent bonding and release of substrates bidirectionally through alternating two wavelengths of light, essentially realizing light-mediated signaling cycles. The downfall of energy by covalent bond formation/scission upon photochemical reactions offers the driving force for the controlled direction of the cascade. To show the molecular diversity, photoswitchable on-demand assembly/disassembly of covalent polymers, including structurally reconfigurable polymers, was realized. This work achieves photoswitchable allosteric regulation of covalent architectures within dynamic multistep cascades, which has rarely been reported before. The results resemble allosteric control within biological signaling networks and should set the stage for many endeavors, such as dynamic assemblies, molecular motors, responsive polymers, and intelligent materials.
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Affiliation(s)
- Hanwei Lu
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hebo Ye
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
| | - Lei You
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- Fujian Science & Technology Innovation Laboratory for Optoelectronic Information of China, Fuzhou 350108, China
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5
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Liu SN, Ren QX, Ding YT, Cao XP, Shi ZF, Chow HF, Kuck D. A Molecular Cage Accessed by Threefold Click Reaction of a C3v-Symmetric Triazido-Functionalized Tribenzotriquinacene. J Org Chem 2024; 89:2127-2137. [PMID: 38270538 DOI: 10.1021/acs.joc.3c01349] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2024]
Abstract
The hitherto unknown hexakis(halomethyl)-functionalized tribenzotriquinacenes (TBTQs) 9 and 10 were synthesized from the key 4b,8b,12b-tribromo-TBTQ derivative 6 by an improved route in 67% overall yield. Extension of the bowl-shaped framework of 9 or 10 by threefold condensation with propargylamine or 2-azidoethylamine afforded the corresponding TBTQ-trialkyne 11 and TBTQ-triazide 12, respectively. While attempts to construct bis-TBTQ cages, including homodimerization of 11 and heterocoupling of 11 with 12, were unsuccessful, triazide 12 was found to undergo threefold [3 + 2]-cycloaddition with 3-ethynylaniline and phloroglucinol tripropargyl ether under click chemistry conditions. The latter reaction enabled facile capping of the TBTQ bowl to give the novel cage compound 5 in 22% yield.
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Affiliation(s)
- Shuai-Nan Liu
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Qing-Xia Ren
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Yun-Tao Ding
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Xiao-Ping Cao
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Zi-Fa Shi
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Hak-Fun Chow
- Department of Chemistry, The Chinese University of Hong Kong, Shatin, NT 999077, Hong Kong
| | - Dietmar Kuck
- Department of Chemistry and Center for Molecular Materials (CM2), Bielefeld University, 33615 Bielefeld, Germany
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6
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de Jong J, Bos JE, Wezenberg SJ. Stimulus-Controlled Anion Binding and Transport by Synthetic Receptors. Chem Rev 2023; 123:8530-8574. [PMID: 37342028 PMCID: PMC10347431 DOI: 10.1021/acs.chemrev.3c00039] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Indexed: 06/22/2023]
Abstract
Anionic species are omnipresent and involved in many important biological processes. A large number of artificial anion receptors has therefore been developed. Some of these are capable of mediating transmembrane transport. However, where transport proteins can respond to stimuli in their surroundings, creation of synthetic receptors with stimuli-responsive functions poses a major challenge. Herein, we give a full overview of the stimulus-controlled anion receptors that have been developed thus far, including their application in membrane transport. In addition to their potential operation as membrane carriers, the use of anion recognition motifs in forming responsive membrane-spanning channels is discussed. With this review article, we intend to increase interest in transmembrane transport among scientists working on host-guest complexes and dynamic functional systems in order to stimulate further developments.
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Affiliation(s)
| | | | - Sander J. Wezenberg
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333
CC Leiden, The Netherlands
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7
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Bouteille Q, Sonet D, Hennebelle M, Desvergne JP, Morvan E, Scalabre A, Pouget E, Méreau R, Bibal B. Singlet Oxygen Responsive Molecular Receptor to Modulate Atropisomerism and Cation Binding. Chemistry 2023; 29:e202203210. [PMID: 36639240 DOI: 10.1002/chem.202203210] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2022] [Indexed: 01/15/2023]
Abstract
In switchable molecular recognition, 1 O2 stimulus responsive receptors offer a unique structural change that is rarely exploited. The employed [4+2] reaction between 1 O2 and anthracene derivatives is quantitative, reversible and easily implemented. To evaluate the full potential of this new stimulus, a non-macrocyclic anthracene-based host was designed for the modular binding of cations. The structural investigation showed that 1 O2 controlled the atropisomerism in an on/off fashion within the pair of hosts. The binding studies revealed higher association constants for the endoperoxide receptor compared to the parent anthracene, due to a more favoured preorganization of the recognition site. The fatigue of the 1 O2 switchable hosts and their complexes was monitored over five cycles of cycloaddition/cycloreversion.
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Affiliation(s)
- Quentin Bouteille
- Institut des Sciences Moléculaires UMR CNRS 5255, Université de Bordeaux, 351 cours de la Libération, 33405, Talence, France
| | - Dorian Sonet
- Institut des Sciences Moléculaires UMR CNRS 5255, Université de Bordeaux, 351 cours de la Libération, 33405, Talence, France
| | - Marc Hennebelle
- Institut des Sciences Moléculaires UMR CNRS 5255, Université de Bordeaux, 351 cours de la Libération, 33405, Talence, France
| | - Jean-Pierre Desvergne
- Institut des Sciences Moléculaires UMR CNRS 5255, Université de Bordeaux, 351 cours de la Libération, 33405, Talence, France
| | - Estelle Morvan
- Institut Européen de Chimie et Biologie, UAR 3033 CNRS INSERM, Université de Bordeaux, 2 rue Roger Escarpit, 33607, Pessac, France
| | - Antoine Scalabre
- Chimie et Biologie des Membranes et des Nanoobjets, UMR CNRS 5248, Université de Bordeaux, 2 rue Roger Escarpit, 33607, Pessac, France
| | - Emilie Pouget
- Chimie et Biologie des Membranes et des Nanoobjets, UMR CNRS 5248, Université de Bordeaux, 2 rue Roger Escarpit, 33607, Pessac, France
| | - Raphaël Méreau
- Institut des Sciences Moléculaires UMR CNRS 5255, Université de Bordeaux, 351 cours de la Libération, 33405, Talence, France
| | - Brigitte Bibal
- Institut des Sciences Moléculaires UMR CNRS 5255, Université de Bordeaux, 351 cours de la Libération, 33405, Talence, France
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8
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Mayer LC, Heitsch S, Trapp O. Nonlinear Effects in Asymmetric Catalysis by Design: Concept, Synthesis, and Applications. Acc Chem Res 2022; 55:3345-3361. [PMID: 36351215 DOI: 10.1021/acs.accounts.2c00557] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Asymmetric synthesis constitutes a key technology for the preparation of enantiomerically pure compounds as well as for the selective control of individual stereocenters in the synthesis of complex compounds. It is thus of extraordinary importance for the synthesis of chiral drugs, dietary supplements, flavors, and fragrances, as well as novel materials with tunable and reconfigurable chiroptical properties or the assembly of complex natural products. Typically, enantiomerically pure catalysts are used for this purpose. To prepare enantiomerically pure ligands or organocatalysts, one can make use of the natural chiral pool. Ligands and organocatalysts with an atropisomeric biphenyl and binaphthyl system have become popular, as they are configurationally stable and contain a C2-symmetric skeleton, which has been found to be particularly privileged. For catalysts with opposite configurations, both product enantiomers can be obtained. Configurationally flexible biphenyl systems initially appeared to be unsuitable for this purpose, as they racemize after successful enantiomer separation and thus are neither storable nor afford a reproducible enantioselectivity. However, there are strategies that exploit the dynamics of such ligands to stereoconvergently enrich one of the catalyst enantiomers. This can be achieved, for example, by coordinating an enantiomerically pure additive to a ligand-metal complex, which results in deracemization of the configurationally flexible biphenyl system, thereby enriching the thermodynamically preferred diastereomer. In this Account, we present our strategy to design stereochemically flexible catalysts that combine the properties of supramolecular recognition, stereoconvergent alignment, and catalysis. Such systems are capable to recognize the chirality of the target product, leading to an increase in enantioselectivity during asymmetric catalysis. We have systematically developed and investigated these smart catalyst systems and have found ways to specifically design and synthesize them for various applications. In addition to (i) reaction product-induced chiral amplification, we have developed systems with (ii) intermolecular and (iii) intramolecular recognition, and successfully applied them in asymmetric catalysis. Our results pave the way for new applications such as temperature-controlled enantioselectivity, controlled inversion of enantioselectivity with the same chirality of the recognition unit, generation of positive nonlinear effects, and targeted design of autocatalytic systems through dynamic formation of transient catalysts. Understanding such systems is of enormous importance for catalytic processes leading to symmetry breaking and amplification of small imbalances of enantiomers and offer a possible explanation of homochirality of biological systems. In addition, we are learning how to target supramolecular interactions to enhance enantioselectivities in asymmetric catalysis through secondary double stereocontrol. Configurationally flexible catalysts will enable future resource-efficient development of asymmetric syntheses, as enantioselectivities can be fully switched by stereoselective alignment of the stereochemically flexible ligand core on demand.
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Affiliation(s)
- Lena C Mayer
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377 München, Germany
| | - Simone Heitsch
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377 München, Germany
| | - Oliver Trapp
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377 München, Germany
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9
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Kundu S, Mondal D, Elramadi E, Valiyev I, Schmittel M. Parallel Allosteric Inhibition of Shuttling Motion and Catalysis in a Silver(I)-loaded [2]Rotaxane. Org Lett 2022; 24:6609-6613. [PMID: 36053156 DOI: 10.1021/acs.orglett.2c02609] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
A dynamic silver(I)-loaded [2]rotaxane shuttle (k298 = 135 kHz) was converted allosterically into a conformationally restricted [2]rotaxane due to the creation of a bulky imine in the center of the axle component. Only the dynamic silver(I)-loaded [2]rotaxane was able to catalyze a 6-endo-cyclization reaction, whereas the static one was catalytically quiet. The mechanism of catalyst deactivation was elucidated.
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Affiliation(s)
- Sohom Kundu
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Debabrata Mondal
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Emad Elramadi
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Isa Valiyev
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Michael Schmittel
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
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10
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Miyake R. Cooperative systems constructed using crystalline metal complexes of short flexible peptides. J INCL PHENOM MACRO 2022. [DOI: 10.1007/s10847-022-01145-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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11
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Jiang C, Hu SJ, Zhou LP, Yang J, Sun QF. Lanthanide-organic pincer hosts with allosteric-controlled metal ion binding specificity. Chem Commun (Camb) 2022; 58:5494-5497. [PMID: 35416812 DOI: 10.1039/d2cc01379g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of lanthanide-organic pincer hosts were synthesized, which showed allosteric-controlled metal ion binding selectivities due to the lanthanide-induced subtle changes of the central vacant binding site.
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Affiliation(s)
- Chen Jiang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Shao-Jun Hu
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Li-Peng Zhou
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.
| | - Jian Yang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.
| | - Qing-Fu Sun
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
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12
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Vatsadze SZ, Maximov AL, Bukhtiyarov VI. Supramolecular Effects and Systems in Catalysis. A Review. DOKLADY CHEMISTRY 2022. [DOI: 10.1134/s0012500822010013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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13
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Lin Y, Gau MR, Carroll PJ, Dmochowski IJ. Counteranions at Peripheral Sites Tune Guest Affinity for a Protonated Hemicryptophane. J Org Chem 2022; 87:5158-5165. [PMID: 35333529 PMCID: PMC9017572 DOI: 10.1021/acs.joc.1c03128] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Indexed: 11/29/2022]
Abstract
The affinity of small molecules for biomolecular cavities is tuned through a combination of primary and secondary interactions. It has been challenging to mimic these features in organic synthetic host molecules, however, where the cavities tend to be highly symmetric and nonpolar, and less amenable to chemical manipulation. Here, a host molecule composed of a TREN ligand and cyclotriveratrylene moiety was investigated. Size-matched polar guests were encapsulated within the cavity via triple protonation of the TREN moiety with various sulfonic acids. X-ray crystallography confirmed guest encapsulation and identified three methanesulfonates, p-toluenesulfonates, or 2-naphthalenesulfonates hydrogen-bonded with H3TREN at the periphery of the cavity. These structurally diverse counteranions were shown by 1H NMR spectroscopy to differentially regulate guest access at the three portals, and to undergo competitive displacement in solution. This work reveals "counteranion tuning" to be a simple and powerful strategy for modulating host-guest affinity, as applied here in a TREN-hemicryptophane.
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Affiliation(s)
- Yannan Lin
- Department of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania 19104-6323, United States
| | - Michael R. Gau
- Department of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania 19104-6323, United States
| | - Patrick J. Carroll
- Department of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania 19104-6323, United States
| | - Ivan J. Dmochowski
- Department of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania 19104-6323, United States
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14
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Johnson KN, Chilukurib B, Fisherb ZE, Hippsa KW, Mazura U. Role of the Supporting Surface in the Thermodynamics and Cooperativity of Axial Ligand Binding to Metalloporphyrins at Interfaces. CURR ORG CHEM 2022. [DOI: 10.2174/1385272826666220209122508] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract:
: Metalloporphyrins have been shown to bind axial ligands in a variety of environments including the vacuum/solid and solution/solid interfaces. Understanding the dynamics of such interactions is a desideratum for the design and implementation of next generation molecular devices which draw inspiration from biological systems to accomplish diverse tasks such as molecular sensing, electron transport, and catalysis to name a few. In this article, we review the current literature of axial ligand coordination to surface-supported porphyrin receptors. We will focus on the coordination process as monitored by scanning tunneling microscopy (STM) that can yield qualitative and quantitative information on the dynamics and binding affinity at the single molecule level. In particular, we will address the role of the substrate and intermolecular interactions in influencing cooperative effects (positive or negative) in the binding affinity of adjacent molecules based on experimental evidence and theoretical calculations.
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Affiliation(s)
- Kristen N. Johnson
- Department of Chemistry and Material Science and Engineering Program, Washington State University, Pullman, 99164-4630, WA, USA
| | - Bhaskar Chilukurib
- Department of Chemistry, Illinois State University, Normal, IL, 61790-4160, USA
| | - Zachary E. Fisherb
- Department of Chemistry, Illinois State University, Normal, IL, 61790-4160, USA
| | - K. W. Hippsa
- Department of Chemistry and Material Science and Engineering Program, Washington State University, Pullman, 99164-4630, WA, USA
| | - Ursula Mazura
- Department of Chemistry and Material Science and Engineering Program, Washington State University, Pullman, 99164-4630, WA, USA
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15
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Ronson TK, Carpenter JP, Nitschke JR. Dynamic optimization of guest binding in a library of diastereomeric heteroleptic coordination cages. Chem 2022. [DOI: 10.1016/j.chempr.2021.12.017] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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16
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Miyake R. Constructing multicomponent cooperative functional systems using metal complexes of short flexible peptides. Chem Commun (Camb) 2021; 57:7987-7996. [PMID: 34312645 DOI: 10.1039/d1cc03101e] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The construction of cooperative systems comprising several units is an essential challenge for artificial systems toward the development of sophisticated functions comparable to those found in biological systems. Flexible frameworks possessing various functional groups that can form weak intra/intermolecular interactions similar to those observed in biological systems have promising design features for artificial systems used to control cooperative systems. However, it is difficult to construct multiple component systems >1 nm using these flexible units by controlling the arrangement of functional units, beginning with the precise control of the cooperative switching of multiple units. In general, it is difficult for oligopeptides to form stable conformations by themselves, although they have designability and structural features suitable for the development of cooperative systems. Increasing the number of coordination bonds in peptides, which are stronger than hydrogen bonds, can be used to control the assembled peptide structures and stabilize their structures owing to the variety of coordination bonds and selective binding affinity. Thus, metal complexes of artificial short peptides have great potential for the development of multicomponent cooperative systems. Based on this concept, we have developed a series of novel metal complexes of flexible peptides and have achieved, to date, cooperative systems, the formation of giant structures, and precise control over the functional units that are the essential bases for designable multifunctional systems that can be regarded as artificial enzymes. In this feature article, we summarize these results and discuss the principal/essential design of artificial systems.
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Affiliation(s)
- Ryosuke Miyake
- Department of Chemistry and Biochemistry, Graduate School of Humanities and Sciences, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo 112-8610, Japan.
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17
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Wang S, Huang Z, Li A, Zhao Y, Zuo W, Li Y, Miao H, Ma J, Sun W, Wang X, Cao L, Wu B, Jia C. Crown Ether Functionalized Potassium‐Responsive Anionocages for Cascaded Guest Delivery. Angew Chem Int Ed Engl 2021; 60:9573-9579. [DOI: 10.1002/anie.202100441] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 02/10/2021] [Indexed: 12/14/2022]
Affiliation(s)
- Shanshan Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Zhe Huang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Anyang Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Yanxia Zhao
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Wei Zuo
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Yawen Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Haohao Miao
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Jiacheng Ma
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Wei Sun
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Xiaoqing Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Liping Cao
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Biao Wu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
- Key Laboratory of Cluster Science of Ministry of Education Key Laboratory of Medical Molecule Science and Pharmaceutics, Engineering Ministry of Industry and Information Technology School of Chemistry and Chemical Engineering Beijing Institute of Technology Beijing 100081 China
| | - Chuandong Jia
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
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18
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Wang S, Huang Z, Li A, Zhao Y, Zuo W, Li Y, Miao H, Ma J, Sun W, Wang X, Cao L, Wu B, Jia C. Crown Ether Functionalized Potassium‐Responsive Anionocages for Cascaded Guest Delivery. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202100441] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Shanshan Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Zhe Huang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Anyang Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Yanxia Zhao
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Wei Zuo
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Yawen Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Haohao Miao
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Jiacheng Ma
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Wei Sun
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Xiaoqing Wang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Liping Cao
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
| | - Biao Wu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
- Key Laboratory of Cluster Science of Ministry of Education Key Laboratory of Medical Molecule Science and Pharmaceutics, Engineering Ministry of Industry and Information Technology School of Chemistry and Chemical Engineering Beijing Institute of Technology Beijing 100081 China
| | - Chuandong Jia
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education College of Chemistry and Materials Science Northwest University Xi'an 710069 China
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19
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Morita H, Akine S, Nakamura T, Nabeshima T. Exclusive formation of a meridional complex of a tripodand and perfect suppression of guest recognition. Chem Commun (Camb) 2021; 57:2124-2127. [PMID: 33538748 DOI: 10.1039/d1cc00146a] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Tripodal ligands have been utilized for complexation-induced structural change, but all the tripodal complexes reported so far are facial isomers, which do not completely reduce the recognition ability by closing the binding pocket. We now report the first example of the selective synthesis of a meridional tripodal complex. The tripodal ligand with a 1,3,5-triethyl-2,4,6-tris(methylene)benzene pivot possessing 2,2'-bipyridine on each arm exclusively formed a mononuclear complex with the mer-[Fe(bpy)]2+ unit. The meridional tripodal complex has a unique structure in which one bipyridine unit is self-penetrated. As a result of cavity blockage, the ion recognition property of the tripodand has been successfully suppressed.
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Affiliation(s)
- Hiroki Morita
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan.
| | - Shigehisa Akine
- Graduate School of Natural Science and Technology and WPI Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Takashi Nakamura
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan.
| | - Tatsuya Nabeshima
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan.
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20
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Goswami A, Gaikwad S, Schmittel M. A Switchable Catalyst Duo for Acyl Transfer Proximity Catalysis and Regulation of Substrate Selectivity. Chemistry 2021; 27:2997-3001. [PMID: 33022776 PMCID: PMC7898682 DOI: 10.1002/chem.202004416] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Indexed: 12/15/2022]
Abstract
Enzymes are encoded with a gamut of information to catalyze a highly selective transformation by selecting the proper reactants from an intricate mixture of constituents. Mimicking biological machinery, two switchable catalysts with differently sized cavities and allosteric control are conceived that allow complementary size-selective acyl transfer in an on/off manner by modulating the effective local concentration of the substrates. Selective activation of one of two catalysts in a mixture of reactants of similar reactivity enabled upregulation of the desired product.
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Affiliation(s)
- Abir Goswami
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversity of SiegenAdolf-Reichwein Str. 257068SiegenGermany
| | - Sudhakar Gaikwad
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversity of SiegenAdolf-Reichwein Str. 257068SiegenGermany
| | - Michael Schmittel
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversity of SiegenAdolf-Reichwein Str. 257068SiegenGermany
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21
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Kelly N, Doert T, Hennersdorf F, Gloe K. Synergistic lanthanide extraction triggered by self-assembly of heterodinuclear Zn(II)/Ln(III) Schiff base/carboxylic acid complexes. SOLVENT EXTRACTION AND ION EXCHANGE 2021. [DOI: 10.1080/07366299.2021.1876383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Norman Kelly
- Department of Process Metallurgy, Helmholtz-Zentrum Dresden-Rossendorf, Helmholtz Institute Freiberg for Resource Technology, Freiberg, Germany
- TU Dresden, School of Sciences, Faculty of Chemistry and Food Chemistry, Dresden, Germany
| | - Thomas Doert
- TU Dresden, School of Sciences, Faculty of Chemistry and Food Chemistry, Dresden, Germany
| | - Felix Hennersdorf
- TU Dresden, School of Sciences, Faculty of Chemistry and Food Chemistry, Dresden, Germany
| | - Karsten Gloe
- TU Dresden, School of Sciences, Faculty of Chemistry and Food Chemistry, Dresden, Germany
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22
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Hoffrichter G, Lützen A. Allosteric binding of sodium deoxycholate by a bis(β-cyclodextrin)-2,2′-bipyridine receptor. Org Chem Front 2021. [DOI: 10.1039/d1qo01173a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The allosteric effect of a new bis(β-cyclodextrin) receptor amounts to a more than 18-fold increase of its binding affinity towards sodium deoxycholate upon addition of a zinc(ii) phenanthroline complex as an effector.
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Affiliation(s)
- Gabriel Hoffrichter
- Kekulé-Institut für Organische Chemie und Biochemie, Rheinische Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Straße 1, 53121 Bonn, Germany
| | - Arne Lützen
- Kekulé-Institut für Organische Chemie und Biochemie, Rheinische Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Straße 1, 53121 Bonn, Germany
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23
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Multiple Stimuli-Responsive Conformational Exchanges of Biphen[3]arene Macrocycle. Molecules 2020; 25:molecules25245780. [PMID: 33302382 PMCID: PMC7762528 DOI: 10.3390/molecules25245780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Revised: 11/09/2020] [Accepted: 11/11/2020] [Indexed: 11/17/2022] Open
Abstract
Conformational exchanges of synthetic macrocyclic acceptors are rather fast, which is rarely studied in the absence of guests. Here, we report multiple stimuli-responsive conformational exchanges between two preexisting conformations of 2,2',4,4'-tetramethoxyl biphen[3]arene (MeBP3) macrocycle. Structures of these two conformations are both observed in solid state, and characterized by 1H NMR, 13C NMR and 2D NMR in solution. In particular, conformational exchanges can respond to solvents, temperatures, guest binding and acid/base addition. The current system may have a role to play in the construction of molecular switches and other stimuli-responsive systems.
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24
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Lai Z, Zhao T, Sessler JL, He Q. Bis–Calix[4]pyrroles: Preparation, structure, complexation properties and beyond. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2020.213528] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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25
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Dodge HM, Kita MR, Chen CH, Miller AJM. Identifying and Evading Olefin Isomerization Catalyst Deactivation Pathways Resulting from Ion-Tunable Hemilability. ACS Catal 2020. [DOI: 10.1021/acscatal.0c03784] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Henry M. Dodge
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Matthew R. Kita
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Chun-Hsing Chen
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Alexander J. M. Miller
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
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26
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Trapp O, Lamour S, Maier F, Siegle AF, Zawatzky K, Straub BF. In Situ Mass Spectrometric and Kinetic Investigations of Soai's Asymmetric Autocatalysis. Chemistry 2020; 26:15871-15880. [PMID: 32822103 PMCID: PMC7756584 DOI: 10.1002/chem.202003260] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Indexed: 01/15/2023]
Abstract
Chemical reactions that lead to a spontaneous symmetry breaking or amplification of the enantiomeric excess are of fundamental interest in explaining the formation of a homochiral world. An outstanding example is Soai's asymmetric autocatalysis, in which small enantiomeric excesses of the added product alcohol are amplified in the reaction of diisopropylzinc and pyrimidine‐5‐carbaldehydes. The exact mechanism is still in dispute due to complex reaction equilibria and elusive intermediates. In situ high‐resolution mass spectrometric measurements, detailed kinetic analyses and doping with in situ reacting reaction mixtures show the transient formation of hemiacetal complexes, which can establish an autocatalytic cycle. We propose a mechanism that explains the autocatalytic amplification involving these hemiacetal complexes. Comprehensive kinetic experiments and modelling of the hemiacetal formation and the Soai reaction allow the precise prediction of the reaction progress, the enantiomeric excess as well as the enantiomeric excess dependent time shift in the induction period. Experimental structural data give insights into the privileged properties of the pyrimidyl units and the formation of diastereomeric structures leading to an efficient amplification of even minimal enantiomeric excesses, respectively.
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Affiliation(s)
- Oliver Trapp
- Department of Chemistry, Ludwig-Maximilians-University Munich, Butenandtstr. 5-13, 81377, Munich, Germany.,Max-Planck-Institute for Astronomy, Königstuhl 17, 69117, Heidelberg, Germany
| | - Saskia Lamour
- Department of Chemistry, Ludwig-Maximilians-University Munich, Butenandtstr. 5-13, 81377, Munich, Germany.,Max-Planck-Institute for Astronomy, Königstuhl 17, 69117, Heidelberg, Germany
| | - Frank Maier
- Department of Chemistry, Ludwig-Maximilians-University Munich, Butenandtstr. 5-13, 81377, Munich, Germany
| | - Alexander F Siegle
- Department of Chemistry, Ludwig-Maximilians-University Munich, Butenandtstr. 5-13, 81377, Munich, Germany
| | - Kerstin Zawatzky
- Department of Chemistry, Ludwig-Maximilians-University Munich, Butenandtstr. 5-13, 81377, Munich, Germany
| | - Bernd F Straub
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
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27
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Hardy M, Lützen A. Better Together: Functional Heterobimetallic Macrocyclic and Cage-like Assemblies. Chemistry 2020; 26:13332-13346. [PMID: 32297380 PMCID: PMC7693062 DOI: 10.1002/chem.202001602] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2020] [Revised: 04/14/2020] [Indexed: 12/18/2022]
Abstract
Metallosupramolecular chemistry has attracted the interest of generations of researches due to the versatile properties and functionalities of oligonuclear coordination complexes. Quite a number of different discrete cages were investigated, mostly consisting of only one type of ligand and one type of metal cation. Looking for ever more complex structures, heterobimetallic complexes became more and more attractive, as they give access to new structural motifs and functions. In the last years substantial success has been made in the design and synthesis of cages consisting of more than one type of metal cations, and a rapidly growing number of functional materials has appeared in the literature. This Minireview describes recent developments in the field of discrete heterometallic macrocycles and cages focusing on functional materials that have been used as host‐systems or as magnetic, photo‐active, redox‐active, and even catalytically active materials.
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Affiliation(s)
- Matthias Hardy
- Kekulé-Institut für Organische Chemie und Biochemie, Universität Bonn, Gerhard-Domagk-Str.1, 53111, Bonn, Germany
| | - Arne Lützen
- Kekulé-Institut für Organische Chemie und Biochemie, Universität Bonn, Gerhard-Domagk-Str.1, 53111, Bonn, Germany
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28
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Ferrero S, Barbero H, Miguel D, García-Rodríguez R, Álvarez CM. Octapodal Corannulene Porphyrin-Based Assemblies: Allosteric Behavior in Fullerene Hosting. J Org Chem 2020; 85:4918-4926. [PMID: 32153183 DOI: 10.1021/acs.joc.0c00072] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
An octapodal corannulene-based supramolecular system has been prepared by introducing eight corannulene moieties in a porphyrin scaffold. Despite the potential of this double picket fence porphyrin for double-tweezer behavior, NMR titrations show exclusive formation of 1:1 adducts. The system exhibits very strong affinity for C60 and C70 (K1 = (2.71 ± 0.08) × 104 and (2.13 ± 0.1) × 105 M-1, respectively), presenting selectivity for the latter. Density functional theory (DFT) calculations indicate that, in addition to the four corannulene units, the relatively flexible porphyrin tether actively participates in the recognition process, resulting in a strong synergistic effect. This leads to a very strong interaction with C60, which in turn also induces a large structural change on the other face (second potential binding site), leading to a negative allosteric effect. We also introduced Zn2+ in the porphyrin core in an attempt to modulate its flexibility. The resulting metalloporphyrin also displayed single-tweezer behavior, albeit with slightly smaller binding constants for C60 and C70, suggesting that the effect of the coordination of fullerene to one face of our supramolecular platform was still transmitted to the other face, leading to the deactivation of the second potential binding site.
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Affiliation(s)
- Sergio Ferrero
- GIR MIOMeT, IU CINQUIMA/Quı́mica Inorgánica, Facultad de Ciencias, Universidad de Valladolid, E-47011 Valladolid, Spain
| | - Héctor Barbero
- GIR MIOMeT, IU CINQUIMA/Quı́mica Inorgánica, Facultad de Ciencias, Universidad de Valladolid, E-47011 Valladolid, Spain
| | - Daniel Miguel
- GIR MIOMeT, IU CINQUIMA/Quı́mica Inorgánica, Facultad de Ciencias, Universidad de Valladolid, E-47011 Valladolid, Spain
| | - Raúl García-Rodríguez
- GIR MIOMeT, IU CINQUIMA/Quı́mica Inorgánica, Facultad de Ciencias, Universidad de Valladolid, E-47011 Valladolid, Spain
| | - Celedonio M Álvarez
- GIR MIOMeT, IU CINQUIMA/Quı́mica Inorgánica, Facultad de Ciencias, Universidad de Valladolid, E-47011 Valladolid, Spain
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29
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Kikot LS, Kulygina CY, Lyapunov AY, Shishkina SV, Vaksler YA, Bogashchenko TY, Kirichenko TI. Synthesis and complexation of molecular clips based on diphenylglycoluril and halogenated dibenzocrown ethers with paraquat. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.151839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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30
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Nishimura T, Sasaki Y, Tachi Y, Suzuki S, Okada K, Kozaki M. Inhibition of Ligand Binding Ability of Three Porphyrins by an Organic Effector. Chem Asian J 2020; 15:594-600. [PMID: 31903693 DOI: 10.1002/asia.201901711] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Revised: 12/27/2019] [Indexed: 11/09/2022]
Abstract
A stimulus-responsive receptor 1 was designed and prepared to control the ligand-binding ability of three active sites, two zinc tetraphenylporphyrin units (P1) and one zinc diethynyldiphenylporphyrin unit (P2), with one effector molecule 2. Bulky hexarylbenzene units were incorporated as shielding panels in the middle of the flexible side arms of 1. Spectroscopic titrations indicated that a stable supramolecular complex 1⋅2 (K1⋅2 =6.7×106 m-1 ) was produced by the cooperative formation of multiple hydrogen and coordination bonds. As a result, the binding of a ligand to P1 was inhibited by 2 in a competitive manner. Additionally, the formation of 1⋅2 brought about conformational restriction of the side arms to cover both faces of P2 with the shielding panels. The binding constant of 4-phenylpyridine with P2 in 1⋅2 decreased to 8.9 % of that in 1. Namely, the ligand-binding ability of P2 was inhibited according to an allosteric mechanism.
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Affiliation(s)
- Tomoaki Nishimura
- Graduate School of Science, Osaka City University, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Yoshito Sasaki
- Graduate School of Science, Osaka City University, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Yoshimitsu Tachi
- Graduate School of Science, Osaka City University, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Shuichi Suzuki
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka, 560-8531, Japan
| | - Keiji Okada
- Graduate School of Science, Osaka City University, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan.,Osaka City University, Advanced Research Institute for Natural Science and Technology (OCARINA), Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Masatoshi Kozaki
- Graduate School of Science, Osaka City University, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan.,Osaka City University, Advanced Research Institute for Natural Science and Technology (OCARINA), Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
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31
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Shimoyama D, Haino T. Entropy‐Driven Cooperativity in the Guest Binding of an Octaphosphonate Bis‐cavitand. Chemistry 2020; 26:3074-3079. [DOI: 10.1002/chem.201905036] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Indexed: 11/08/2022]
Affiliation(s)
- Daisuke Shimoyama
- Department of ChemistryGraduate School of ScienceHiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Takeharu Haino
- Department of ChemistryGraduate School of ScienceHiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
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32
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Saha S, Ghosh A, Paululat T, Schmittel M. Allosteric regulation of rotational, optical and catalytic properties within multicomponent machinery. Dalton Trans 2020; 49:8693-8700. [DOI: 10.1039/d0dt01961e] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Allosteric regulation of various functions within multicomponent machinery was triggered by the reversible transformation of nanorotors (k298 = 44–61 kHz) to “dimeric” supramolecular structures (k298 = 0.60 kHz) upon adding a stoichiometric chemical stimulus.
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Affiliation(s)
- Suchismita Saha
- Center of Micro- and Nanochemistry and Engineering
- Department Chemie – Biologie
- Organische Chemie I
- D-57068 Siegen
- Germany
| | - Amit Ghosh
- Center of Micro- and Nanochemistry and Engineering
- Department Chemie – Biologie
- Organische Chemie I
- D-57068 Siegen
- Germany
| | - Thomas Paululat
- Department Chemie – Biologie
- Organische Chemie II
- D-57068 Siegen
- Germany
| | - Michael Schmittel
- Center of Micro- and Nanochemistry and Engineering
- Department Chemie – Biologie
- Organische Chemie I
- D-57068 Siegen
- Germany
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33
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Blanco-Gómez A, Cortón P, Barravecchia L, Neira I, Pazos E, Peinador C, García MD. Controlled binding of organic guests by stimuli-responsive macrocycles. Chem Soc Rev 2020; 49:3834-3862. [DOI: 10.1039/d0cs00109k] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Synthetic supramolecular chemistry pursues not only the construction of new matter, but also control over its inherently dynamic behaviour.
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Affiliation(s)
- Arturo Blanco-Gómez
- Departamento de Química
- Facultade de Ciencias and Centro de Investigacións Científicas Avanzadas (CICA)
- Universidade da Coruña
- 15071 A Coruña
- Spain
| | - Pablo Cortón
- Departamento de Química
- Facultade de Ciencias and Centro de Investigacións Científicas Avanzadas (CICA)
- Universidade da Coruña
- 15071 A Coruña
- Spain
| | - Liliana Barravecchia
- Departamento de Química
- Facultade de Ciencias and Centro de Investigacións Científicas Avanzadas (CICA)
- Universidade da Coruña
- 15071 A Coruña
- Spain
| | - Iago Neira
- Departamento de Química
- Facultade de Ciencias and Centro de Investigacións Científicas Avanzadas (CICA)
- Universidade da Coruña
- 15071 A Coruña
- Spain
| | - Elena Pazos
- Departamento de Química
- Facultade de Ciencias and Centro de Investigacións Científicas Avanzadas (CICA)
- Universidade da Coruña
- 15071 A Coruña
- Spain
| | - Carlos Peinador
- Departamento de Química
- Facultade de Ciencias and Centro de Investigacións Científicas Avanzadas (CICA)
- Universidade da Coruña
- 15071 A Coruña
- Spain
| | - Marcos D. García
- Departamento de Química
- Facultade de Ciencias and Centro de Investigacións Científicas Avanzadas (CICA)
- Universidade da Coruña
- 15071 A Coruña
- Spain
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34
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Kondo S, Masuda J, Komiyama T, Yasuda N, Takaya H, Yamanaka M. Amphoteric Homotropic Allosteric Association between a Hexakis‐Urea Receptor and Dihydrogen Phosphate. Chemistry 2019; 25:16201-16206. [DOI: 10.1002/chem.201904241] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2019] [Indexed: 12/19/2022]
Affiliation(s)
- Seiya Kondo
- Department of ChemistryFaculty of ScienceShizuoka University 836 Ohya Suruga-ku Shizuoka 422-8529 Japan
| | - Junya Masuda
- Department of ChemistryFaculty of ScienceShizuoka University 836 Ohya Suruga-ku Shizuoka 422-8529 Japan
| | - Tomoki Komiyama
- Department of ChemistryFaculty of ScienceShizuoka University 836 Ohya Suruga-ku Shizuoka 422-8529 Japan
| | - Nobuhiro Yasuda
- Diffraction and Scattering DivisionJapan Synchrotron Radiation Research Institute Sayo, Hyogo 679-5198 Japan
| | - Hikaru Takaya
- Institute for Chemical ResearchKyoto University Gokasho Uji Kyoto 611-0011 Japan
| | - Masamichi Yamanaka
- Department of ChemistryFaculty of ScienceShizuoka University 836 Ohya Suruga-ku Shizuoka 422-8529 Japan
- Research Institute of Green Science and TechnologyShizuoka University 836 Ohya Suruga-ku Shizuoka 422-8529 Japan
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35
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Smith JB, Camp AM, Farquhar AH, Kerr SH, Chen CH, Miller AJM. Organometallic Elaboration as a Strategy for Tuning the Supramolecular Characteristics of Aza-Crown Ethers. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00462] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Jacob B. Smith
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Andrew M. Camp
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Alexandra H. Farquhar
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Stewart H. Kerr
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Chun-Hsing Chen
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
| | - Alexander J. M. Miller
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, United States
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36
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Abstract
Cation and anion recognition have both played central roles in the development of supramolecular chemistry. Much of the associated research has focused on the development of receptors for individual cations or anions, as well as their applications in different areas. Rarely is complexation of the counterions considered. In contrast, ion pair recognition chemistry, emerging from cation and anion coordination chemistry, is a specific research field where co-complexation of both anions and cations, so-called ion pairs, is the center of focus. Systems used for the purpose, known as ion pair receptors, are typically di- or polytopic hosts that contain recognition sites for both cations and anions and which permit the concurrent binding of multiple ions. The field of ion pair recognition has blossomed during the past decades. Several smaller reviews on the topic were published roughly 5 years ago. They provided a summary of synthetic progress and detailed the various limiting ion recognition modes displayed by both acyclic and macrocyclic ion pair receptors known at the time. The present review is designed to provide a comprehensive and up-to-date overview of the chemistry of macrocycle-based ion pair receptors. We specifically focus on the relationship between structure and ion pair recognition, as well as applications of ion pair receptors in sensor development, cation and anion extraction, ion transport, and logic gate construction.
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Affiliation(s)
- Qing He
- Department of Chemistry , The University of Texas at Austin , Austin , Texas 78712 , United States.,State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering , Hunan University , Changsha 410082 , P. R. China
| | - Gabriela I Vargas-Zúñiga
- Department of Chemistry , The University of Texas at Austin , Austin , Texas 78712 , United States
| | - Seung Hyun Kim
- Department of Chemistry and Research Institute of Natural Science , Gyeongsang National University , Jinju , 660-701 , Korea
| | - Sung Kuk Kim
- Department of Chemistry and Research Institute of Natural Science , Gyeongsang National University , Jinju , 660-701 , Korea
| | - Jonathan L Sessler
- Institute for Supramolecular Chemistry and Catalysis , Shanghai University , Shanghai 200444 , P.R. China.,Department of Chemistry , The University of Texas at Austin , Austin , Texas 78712 , United States
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37
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Schneider HJ. Strain effects determine the performance of artificial allosteric systems: calixarenes as models. Chem Commun (Camb) 2019; 55:3433-3444. [PMID: 30843901 DOI: 10.1039/c9cc00573k] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
It is shown that the performance of allosteric systems regarding the efficiency and the speed of response depends critically on the strain energy of the equilibrating conformers and of the corresponding interconversion transition state. The affinity of a substrate A can be large enough to overcome in the absence of an effector E by induced fit the strain involved in the formation of an optimal conformation for binding A. The efficiency as given by the ratio KAE/KA of binding constants in the presence or absence of an effector is, for many published synthetic allosteric systems, relatively low; in practice this means that these only function within rather limited concentration ranges. A small KAE/KA ratio means that the binding strength of A or the corresponding signal will increase only little by adding an effector, and may need higher concentration of E. Implementation of steric distortion in the minor conformer can lead to reduced binding of A in the absence of the effector E. Destabilization of conformers can also result from the inclusion of high energy water molecules within a cavity. Furthermore, until now it has been overlooked that strain in the transition state can lead to reaction times of up to days, and thus to the neglect of experimental observation. The role of conformational changes within an allosteric molecule is characterized with a variety of calixarenes and other compound classes, offering a clue for the design of more efficient synthetic systems with high cooperativity.
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Affiliation(s)
- Hans-Jörg Schneider
- FR Organische Chemie, Universität des Saarlandes, D 66041 Saarbrücken, Germany.
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38
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Elemans JAAW, Nolte RJM. Porphyrin cage compounds based on glycoluril – from enzyme mimics to functional molecular machines. Chem Commun (Camb) 2019; 55:9590-9605. [DOI: 10.1039/c9cc04372a] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
This Feature Article gives an overview of the application of glycoluril-based porphyrin cage compounds in host–guest chemistry, allosterically controlled self-assembly, biomimetic catalysis, and polymer encoding.
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Affiliation(s)
| | - Roeland J. M. Nolte
- Radboud University
- Institute for Molecules and Materials
- 6525 AJ Nijmegen
- The Netherlands
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39
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Kokan Z, Chmielewski MJ. A Photoswitchable Heteroditopic Ion-Pair Receptor. J Am Chem Soc 2018; 140:16010-16014. [DOI: 10.1021/jacs.8b08689] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Zoran Kokan
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089 Warszawa, Poland
- Division of Materials Chemistry, Rud̵er Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia
| | - Michał J. Chmielewski
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089 Warszawa, Poland
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40
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Ravi A, Krishnarao PS, Shumilova TA, Khrustalev VN, Rüffer T, Lang H, Kataev EA. Cation Molecular Exchanger Based on a Conformational Hinge. Org Lett 2018; 20:6211-6214. [DOI: 10.1021/acs.orglett.8b02687] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Anil Ravi
- Institute of Chemistry, Technische Universität Chemnitz, 09107 Chemnitz, Germany
| | | | - Tatiana A. Shumilova
- Institute of Chemistry, Technische Universität Chemnitz, 09107 Chemnitz, Germany
| | - Victor N. Khrustalev
- National Research Center Kurchatov Institute, Acad Kurchatov Square 1, 123182 Moscow, Russian Federation
- Peoples’ Friendship University of Russia (RUDN University), Miklukho-Maklay Street 6, 117198 Moscow, Russian Federation
| | - Tobias Rüffer
- Institute of Chemistry, Technische Universität Chemnitz, 09107 Chemnitz, Germany
| | - Heinrich Lang
- Institute of Chemistry, Technische Universität Chemnitz, 09107 Chemnitz, Germany
| | - Evgeny A. Kataev
- Institute of Chemistry, Technische Universität Chemnitz, 09107 Chemnitz, Germany
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41
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Kikot LS, Kulygina CY, Lyapunov AY, Shishkina SV, Zubatyuk RI, Bogashchenko TY, Kirichenko TI. Synthesis and complexation of molecular clips based on diphenylglycoluril and dibenzocrown ethers with alkali metal cations and paraquat. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.08.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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42
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Burns KT, Marks WR, Cheung PM, Seda T, Zakharov LN, Gilbertson JD. Uncoupled Redox-Inactive Lewis Acids in the Secondary Coordination Sphere Entice Ligand-Based Nitrite Reduction. Inorg Chem 2018; 57:9601-9610. [PMID: 29608297 PMCID: PMC6102076 DOI: 10.1021/acs.inorgchem.8b00032] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Metal complexes composed of redox-active pyridinediimine (PDI) ligands are capable of forming ligand-centered radicals. In this Forum article, we demonstrate that integration of these types of redox-active sites with bioinspired secondary coordination sphere motifs produce direduced complexes, where the reduction potential of the ligand-based redox sites is uncoupled from the secondary coordination sphere. The utility of such ligand design was explored by encapsulating redox-inactive Lewis acidic cations via installation of a pendant benzo-15-crown-5 in the secondary coordination sphere of a series of Fe(PDI) complexes. Fe(15bz5PDI)(CO)2 was shown to encapsulate the redox-inactive alkali ion, Na+, causing only modest (31 mV) anodic shifts in the ligand-based redox-active sites. By uncoupling the Lewis acidic sites from the ligand-based redox sites, the pendant redox-inactive ion, Na+, can entice the corresponding counterion, NO2-, for reduction to NO. The subsequent initial rate analysis reveals an acceleration in anion reduction, confirming this hypothesis.
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Affiliation(s)
- Kyle T. Burns
- Department of Chemistry, Western Washington University, Bellingham, Washington 98225, United States
| | - Walker R. Marks
- Department of Chemistry, Western Washington University, Bellingham, Washington 98225, United States
| | - Pui Man Cheung
- Department of Chemistry, Western Washington University, Bellingham, Washington 98225, United States
| | - Takele Seda
- Department of Physics, Western Washington University, Bellingham, Washington 98225, United States
| | - Lev N. Zakharov
- Department of Chemistry, University of Oregon, Eugene, Oregon 97403, United States
| | - John D. Gilbertson
- Department of Chemistry, Western Washington University, Bellingham, Washington 98225, United States
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43
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Yang LP, Lu SB, Valkonen A, Pan F, Rissanen K, Jiang W. A conformationally adaptive macrocycle: conformational complexity and host-guest chemistry of zorb[4]arene. Beilstein J Org Chem 2018; 14:1570-1577. [PMID: 30013684 PMCID: PMC6037019 DOI: 10.3762/bjoc.14.134] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2018] [Accepted: 06/13/2018] [Indexed: 12/31/2022] Open
Abstract
Large amplitude conformational change is one of the features of biomolecular recognition and is also the basis for allosteric effects and signal transduction in functional biological systems. However, synthetic receptors with controllable conformational changes are rare. In this article, we present a thorough study on the host–guest chemistry of a conformationally adaptive macrocycle, namely per-O-ethoxyzorb[4]arene (ZB4). Similar to per-O-ethoxyoxatub[4]arene, ZB4 is capable of accommodating a wide range of organic cations. However, ZB4 does not show large amplitude conformational responses to the electronic substituents on the guests. Instead of a linear free-energy relationship, ZB4 follows a parabolic free-energy relationship. This is explained by invoking the influence of secondary C–H···O hydrogen bonds on the primary cation···π interactions based on the information obtained from four representative crystal structures. In addition, heat capacity changes (ΔCp) and enthalpy–entropy compensation phenomena both indicate that solvent reorganization is also involved during the binding. This research further deepens our understanding on the binding behavior of ZB4 and lays the basis for the construction of stimuli-responsive materials with ZB4 as a major component.
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Affiliation(s)
- Liu-Pan Yang
- Academy of Advanced Interdisciplinary Studies, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China.,Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
| | - Song-Bo Lu
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China.,School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150001, China
| | - Arto Valkonen
- University of Jyvaskyla, Department of Chemistry and Nanoscience Center, P. O. Box 35, FI-40014, Jyvaskyla, Finland
| | - Fangfang Pan
- College of Chemistry, Central China Normal University, Wuhan, 430079, China
| | - Kari Rissanen
- University of Jyvaskyla, Department of Chemistry and Nanoscience Center, P. O. Box 35, FI-40014, Jyvaskyla, Finland
| | - Wei Jiang
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
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44
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Deka B, Sarma RJ. Cooperative Binding of Fluoride Anions to a Flexible Cystine‐Based Receptor Containing Two 3,5‐Dinitrobenzamide Motifs. ChemistrySelect 2018. [DOI: 10.1002/slct.201800956] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Barnali Deka
- Department of ChemistryUniversity of Gauhati, Guwahati 781014 Assam India
| | - Rupam J Sarma
- Department of ChemistryUniversity of Gauhati, Guwahati 781014 Assam India
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45
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Huang T, Zhu Z, Xue R, Wu T, Liao P, Liu Z, Xiao Y, Huang J, Yan Y. Allosteric Self-Assembly of Coordinating Terthiophene Amphiphile for Triggered Light Harvesting. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2018; 34:5935-5942. [PMID: 29708341 DOI: 10.1021/acs.langmuir.8b00759] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Allosteric regulation is extensively employed by nature to achieve functional control of protein or deoxyribonucleic acid through triggered conformational change at a remote site. We report that a similar strategy can be utilized in artificial self-assembly to control the self-assembled structure and its function. We show that on binding of metal ions to the headgroup of an amphiphile TTC4L, the conformational change may lead to change of the dipole orientation of the energy donor at the chain end. This on the one hand leads to a drastically different self-assembled structure; on the other hand, it enables light harvesting between the donor-acceptor. Because the Forster resonance fluorescence transfer efficiency is gated by metal ions, controlling the feeding of metal ions allows switching on and off of light harvesting. We expect that using allosteric self-assembly, we will be able to create abundant structures with distinct function from limited molecules, which show prominent potential for the postorganic modification of the structure and function of self-assembled materials.
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46
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Ménand M, Sollogoub M, Boitrel B, Le Gac S. Cyclodextrin-Sandwiched Hexaphyrin Hybrids: Side-to-Side Cavity Coupling Switched by a Temperature- and Redox-Responsive Central Device. Chemistry 2018; 24:5804-5812. [DOI: 10.1002/chem.201705958] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Indexed: 12/25/2022]
Affiliation(s)
- Mickaël Ménand
- Institut Parisien de Chimie Moléculaire (IPCM), UMR 8232, UPMC Univ Paris 06, CNRS; Sorbonne Université; 4 place Jussieu 75005 Paris France
| | - Matthieu Sollogoub
- Institut Parisien de Chimie Moléculaire (IPCM), UMR 8232, UPMC Univ Paris 06, CNRS; Sorbonne Université; 4 place Jussieu 75005 Paris France
| | - Bernard Boitrel
- Institut des Sciences Chimiques de Rennes, UMR CNRS 6226; Université de Rennes 1; 263 av. du General Leclerc 35042 Rennes cedex France
| | - Stéphane Le Gac
- Institut des Sciences Chimiques de Rennes, UMR CNRS 6226; Université de Rennes 1; 263 av. du General Leclerc 35042 Rennes cedex France
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47
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Remote electrochemical modulation of pK a in a rotaxane by co-conformational allostery. Proc Natl Acad Sci U S A 2017; 115:9385-9390. [PMID: 29255033 DOI: 10.1073/pnas.1712783115] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Allosteric control, one of Nature's most effective ways to regulate functions in biomolecular machinery, involves the transfer of information between distant sites. The mechanistic details of such a transfer are still an object of intensive investigation and debate, and the idea that intramolecular communication could be enabled by dynamic processes is gaining attention as a complement to traditional explanations. Mechanically interlocked molecules, owing to the particular kind of connection between their components and the resulting dynamic behavior, are attractive systems to investigate allosteric mechanisms and exploit them to develop functionalities with artificial species. We show that the pKa of an ammonium site located on the axle component of a [2]rotaxane can be reversibly modulated by changing the affinity of a remote recognition site for the interlocked crown ether ring through electrochemical stimulation. The use of a reversible ternary redox switch enables us to set the pKa to three different values, encompassing more than seven units. Our results demonstrate that in the axle the two sites do not communicate, and that in the rotaxane the transfer of information between them is made possible by the shuttling of the ring, that is, by a dynamic intramolecular process. The investigated coupling of electron- and proton-transfer reactions is reminiscent of the operation of the protein complex I of the respiratory chain.
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48
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Miyake R, Kuwata C, Ueno M, Yamada T. Humidity-Responsive ON/OFF Switching of Gas Inclusion by Using Cooperative Opening/Closing of Heterogeneous Crystalline Cavities in a Peptide NiII
Macrocycle. Chemistry 2017; 24:793-797. [DOI: 10.1002/chem.201704809] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2017] [Indexed: 11/08/2022]
Affiliation(s)
- Ryosuke Miyake
- Department of Chemistry and Biochemistry, Graduate School of Humanities and Sciences; Ochanomizu University; 2-1-1, Otsuka, Bunkyo-ku Tokyo 112-8610 Japan
- JST; PRESTO; 4-1-8, Honcho, Kawaguchi Saitama 332-0012 Japan
| | - Chika Kuwata
- Department of Chemistry and Biochemistry, Graduate School of Humanities and Sciences; Ochanomizu University; 2-1-1, Otsuka, Bunkyo-ku Tokyo 112-8610 Japan
| | - Manami Ueno
- Department of Chemistry and Biochemistry, Graduate School of Humanities and Sciences; Ochanomizu University; 2-1-1, Otsuka, Bunkyo-ku Tokyo 112-8610 Japan
| | - Teppei Yamada
- JST; PRESTO; 4-1-8, Honcho, Kawaguchi Saitama 332-0012 Japan
- Department of Applied Chemistry and Biochemistry, Graduate School of Engineering; Kyushu University; 744, Motooka, Nishi-ku Fukuoka 819-0395 Japan
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49
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Paul I, Goswami A, Mittal N, Schmittel M. Catalytic Three-Component Machinery: Control of Catalytic Activity by Machine Speed. Angew Chem Int Ed Engl 2017; 57:354-358. [DOI: 10.1002/anie.201709644] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2017] [Revised: 10/30/2017] [Indexed: 12/28/2022]
Affiliation(s)
- Indrajit Paul
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; University of Siegen; Adolf-Reichwein-Str. 2 57068 Siegen Germany
| | - Abir Goswami
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; University of Siegen; Adolf-Reichwein-Str. 2 57068 Siegen Germany
| | - Nikita Mittal
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; University of Siegen; Adolf-Reichwein-Str. 2 57068 Siegen Germany
| | - Michael Schmittel
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; University of Siegen; Adolf-Reichwein-Str. 2 57068 Siegen Germany
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50
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Paul I, Goswami A, Mittal N, Schmittel M. Katalytische Drei-Komponenten-Maschinen: Steuerung der katalytischen Aktivität mittels Maschinengeschwindigkeit. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201709644] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Indrajit Paul
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; Universität Siegen; Adolf-Reichwein-Straße 2 57068 Siegen Deutschland
| | - Abir Goswami
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; Universität Siegen; Adolf-Reichwein-Straße 2 57068 Siegen Deutschland
| | - Nikita Mittal
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; Universität Siegen; Adolf-Reichwein-Straße 2 57068 Siegen Deutschland
| | - Michael Schmittel
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I; Universität Siegen; Adolf-Reichwein-Straße 2 57068 Siegen Deutschland
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