1
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Rinshad V, Aggarwal M, Clegg JK, Mukherjee PS. Harnessing a Pd 4 Water-Soluble Molecular Capsule as a Size-Selective Catalyst for Targeted Oxidation of Alkyl Aromatics. JACS AU 2024; 4:3238-3247. [PMID: 39211591 PMCID: PMC11350579 DOI: 10.1021/jacsau.4c00539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2024] [Revised: 08/05/2024] [Accepted: 08/06/2024] [Indexed: 09/04/2024]
Abstract
Molecular hosts with functional cavities can emulate enzymatic behavior through selective encapsulation of substrates, resulting in high chemo-, regio-, and stereoselective product formation. It is still challenging to synthesize enzyme-mimicking hosts that exhibit a narrow substrate scope that relies upon the recognition of substrates based on the molecular size. Herein, we introduce a Pd4 self-assembled water-soluble molecular capsule [M 4 L 2] (MC) that was formed through the self-assembly of a ligand L (4',4‴'-(1,4-phenylene)bis(1',4'-dihydro-[4,2':6',4″-terpyridine]-3',5'-dicarbonitrile)) with the acceptor cis-[(en)Pd(NO3)2] [en = ethane-1,2-diamine] (M). The molecular capsule MC showed size-selective recognition towards xylene isomers. The redox property of MC was explored for efficient and selective oxidation of one of the alkyl groups of m-xylene and p-xylene to their corresponding toluic acids using molecular O2 as an oxidant upon photoirradiation. Employing host-guest chemistry, we demonstrate the homogeneous catalysis of alkyl aromatics to the corresponding monocarboxylic acids in water under mild conditions. Despite homogeneous catalysis, the products were separated from the reaction mixtures by simple filtration/extraction, and the catalyst was reused. The larger analogues of the alkyl aromatics failed to bind within the MC's hydrophobic cavity, resulting in a lower/negligible reaction outcome. The present study represents a facile approach for selective photo-oxidation of xylene isomers to their corresponding toluic acids in an aqueous medium under mild conditions.
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Affiliation(s)
- Valiyakath
Abdul Rinshad
- Department
of Inorganic and Physical Chemistry, Indian
Institute of Science, Bangalore 560012, India
| | - Medha Aggarwal
- Department
of Inorganic and Physical Chemistry, Indian
Institute of Science, Bangalore 560012, India
| | - Jack K. Clegg
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, Queensland 4072, Australia
| | - Partha Sarathi Mukherjee
- Department
of Inorganic and Physical Chemistry, Indian
Institute of Science, Bangalore 560012, India
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2
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Linnebank PR, Kluwer AM, Reek JNH. Substrate scope driven optimization of an encapsulated hydroformylation catalyst. Catal Sci Technol 2024; 14:1837-1847. [PMID: 38571547 PMCID: PMC10987017 DOI: 10.1039/d4cy00051j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Accepted: 02/16/2024] [Indexed: 04/05/2024]
Abstract
Caged complexes can provide impressive selective catalysts. Due to the complex shapes of such caged catalysts, however, the level of selectivity control of a single substrate cannot be extrapolated to other substrates. Herein, the substrate scope using 41 terminal alkene substrates is investigated in the hydroformylation reaction with an encapsulated rhodium catalyst [Rh(H)(CO)3(P(mPy3(ZnTPP)3))] (CAT1). For all substrates, the amount of branched products formed was higher with CAT1 than with the unencapsulated reference catalyst [Rh(H)(CO)2(P(mPy3))2] (CAT2) (linear/branched ratio between 2.14 and 0.12 for CAT1 and linear/branched ratio between 6.22 and 0.59 for CAT2). Interestingly, the level of cage induced selectivity depends strongly on the substrate structure that is converted. Analysis of the substrate scope combined with DFT calculations suggests that noncovalent interactions between the substrate moieties and cage walls play a key role in controlling the regioselectivity. Consequently, these supramolecular interactions were further optimized by replacing the ZnTPP building block with a zinc porphyrin analog that contained OiPr substituents on the meta position of the aryl rings. The resulting caged catalyst, CAT4, converted substrates with even higher branched selectivity.
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Affiliation(s)
- Pim R Linnebank
- Homogeneous, Supramolecular and Bio-Inspired Catalysis, Van't Hoff Institute for Molecular Sciences University of Amsterdam Science Park 904 1098 XH Amsterdam The Netherlands
| | | | - Joost N H Reek
- Homogeneous, Supramolecular and Bio-Inspired Catalysis, Van't Hoff Institute for Molecular Sciences University of Amsterdam Science Park 904 1098 XH Amsterdam The Netherlands
- InCatT B.V Science Park 904 1098 XH Amsterdam The Netherlands
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3
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Lorenzetto T, Bordignon F, Munarin L, Mancin F, Fabris F, Scarso A. Substrate Selectivity Imparted by Self-Assembled Molecular Containers and Catalysts. Chemistry 2024; 30:e202301811. [PMID: 37466005 DOI: 10.1002/chem.202301811] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Revised: 07/14/2023] [Accepted: 07/17/2023] [Indexed: 07/20/2023]
Abstract
Recent trends in catalysis are devoted to mimicking some peculiar features of enzymes like site selectivity, through functional group recognition, and substrate selectivity, through recognition of the entire surface of the substrate. The latter is a specific feature of enzymes that is seldomly present in homogeneous catalysis. Supramolecular catalysis, thanks to the self-assembly of simple subunits, enables the creation of cavities and surfaces whose confinement effects drive the preferential binding of a substrate among others with consequent substrate selectivity. The topic is an emerging field that exploits recognition phenomena to discriminate the reagents based on their size and shape. This review deals this cutting-edge field of research covering examples of supramolecular self-assembled molecular containers and catalysts operating in organic as well as aqueous media, with special emphasis for catalytic systems dealing with direct competitive experiments involving two or more substrates.
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Affiliation(s)
- Tommaso Lorenzetto
- Dipartimento di Scienze Molecolari e Nanosistemi, Università Ca' Foscari di Venezia, Via Torino 155, Venezia Mestre, 30172, Italy
| | - Francesca Bordignon
- Dipartimento di Scienze Molecolari e Nanosistemi, Università Ca' Foscari di Venezia, Via Torino 155, Venezia Mestre, 30172, Italy
- Dipartimento di Scienze Chimiche, Università degli studi di Padova, via Marzolo 1, Padova, 35100, Italy
| | - Luca Munarin
- Dipartimento di Scienze Molecolari e Nanosistemi, Università Ca' Foscari di Venezia, Via Torino 155, Venezia Mestre, 30172, Italy
| | - Fabrizio Mancin
- Dipartimento di Scienze Chimiche, Università degli studi di Padova, via Marzolo 1, Padova, 35100, Italy
| | - Fabrizio Fabris
- Dipartimento di Scienze Molecolari e Nanosistemi, Università Ca' Foscari di Venezia, Via Torino 155, Venezia Mestre, 30172, Italy
| | - Alessandro Scarso
- Dipartimento di Scienze Molecolari e Nanosistemi, Università Ca' Foscari di Venezia, Via Torino 155, Venezia Mestre, 30172, Italy
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4
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Piskorz TK, Martí-Centelles V, Spicer RL, Duarte F, Lusby PJ. Picking the lock of coordination cage catalysis. Chem Sci 2023; 14:11300-11331. [PMID: 37886081 PMCID: PMC10599471 DOI: 10.1039/d3sc02586a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Accepted: 08/29/2023] [Indexed: 10/28/2023] Open
Abstract
The design principles of metallo-organic assembly reactions have facilitated access to hundreds of coordination cages of varying size and shape. Many of these assemblies possess a well-defined cavity capable of hosting a guest, pictorially mimicking the action of a substrate binding to the active site of an enzyme. While there are now a growing collection of coordination cages that show highly proficient catalysis, exhibiting both excellent activity and efficient turnover, this number is still small compared to the vast library of metal-organic structures that are known. In this review, we will attempt to unpick and discuss the key features that make an effective coordination cage catalyst, linking structure to activity (and selectivity) using lessons learnt from both experimental and computational analysis of the most notable exemplars. We will also provide an outlook for this area, reasoning why coordination cages have the potential to become the gold-standard in (synthetic) non-covalent catalysis.
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Affiliation(s)
- Tomasz K Piskorz
- Chemistry Research Laboratory, University of Oxford Oxford OX1 3TA UK
| | - Vicente Martí-Centelles
- Instituto Interuniversitario de Investigación de Reconocimiento Molecular y Desarrollo Tecnológico (IDM), Universitat Politècnica de València, Universitat de València Camino de Vera, s/n 46022 Valencia Spain
| | - Rebecca L Spicer
- Department of Chemistry, Lancaster University Lancaster LA14YB UK
| | - Fernanda Duarte
- Chemistry Research Laboratory, University of Oxford Oxford OX1 3TA UK
| | - Paul J Lusby
- EaStCHEM School of Chemistry, University of Edinburgh Edinburgh Scotland EH9 3FJ UK
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5
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James CC, de Bruin B, Reek JNH. Transition Metal Catalysis in Living Cells: Progress, Challenges, and Novel Supramolecular Solutions. Angew Chem Int Ed Engl 2023; 62:e202306645. [PMID: 37339103 DOI: 10.1002/anie.202306645] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Revised: 06/20/2023] [Accepted: 06/20/2023] [Indexed: 06/22/2023]
Abstract
The importance of transition metal catalysis is exemplified by its wide range of applications, for example in the synthesis of chemicals, natural products, and pharmaceuticals. However, one relatively new application is for carrying out new-to-nature reactions inside living cells. The complex environment of a living cell is not welcoming to transition metal catalysts, as a diverse range of biological components have the potential to inhibit or deactivate the catalyst. Here we review the current progress in the field of transition metal catalysis, and evaluation of catalysis efficiency in living cells and under biological (relevant) conditions. Catalyst poisoning is a ubiquitous problem in this field, and we propose that future research into the development of physical and kinetic protection strategies may provide a route to improve the reactivity of catalysts in cells.
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Affiliation(s)
- Catriona C James
- van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Bas de Bruin
- van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Joost N H Reek
- van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands
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6
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Linnebank PR, Poole DA, Kluwer AM, Reek JNH. A substrate descriptor based approach for the prediction and understanding of the regioselectivity in caged catalyzed hydroformylation. Faraday Discuss 2023; 244:169-185. [PMID: 37139675 PMCID: PMC10416704 DOI: 10.1039/d3fd00023k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 02/08/2023] [Indexed: 02/11/2023]
Abstract
The use of data driven tools to predict the selectivity of homogeneous catalysts has received considerable attention in the past years. In these studies often the catalyst structure is varied, but the use of substrate descriptors to rationalize the catalytic outcome is relatively unexplored. To study whether this may be an effective tool, we investigated both an encapsulated and a non-encapsulated rhodium based catalyst in the hydroformylation reaction of 41 terminal alkenes. For the non-encapsulated catalyst, CAT2, the regioselectivity of the acquired substrate scope could be predicted with high accuracy using the Δ13C NMR shift of the alkene carbon atoms as a descriptor (R2 = 0.74) and when combined with a computed intensity of the CC stretch vibration (ICC stretch) the accuracy increased further (R2 = 0.86). In contrast, a substrate descriptor approach with an encapsulated catalyst, CAT1, appeared more challenging indicating a confined space effect. We investigated Sterimol parameters of the substrates as well as computer-aided drug design descriptors of the substrates, but these parameters did not result in a predictive formula. The most accurate substrate descriptor based prediction was made with the Δ13C NMR shift and ICC stretch (R2 = 0.52), suggestive of the involvement of CH-π interactions. To further understand the confined space effect of CAT1, we focused on the subset of 21 allylbenzene derivatives to investigate predictive parameters unique for this subset. These results showed the inclusion of a charge parameter of the aryl ring improved the regioselectivity predictions, which is in agreement with our assessment that noncovalent interactions between the phenyl ring of the cage and the aryl ring of the substrate are relevant for the regioselectivity outcome. However, the correlation is still weak (R2 = 0.36) and as such we are investigating novel parameters that should improve the overall regioselectivity outcome.
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Affiliation(s)
- Pim R Linnebank
- Homogeneous, Supramolecular and Bio-Inspired Catalysis, Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands.
| | - David A Poole
- Homogeneous, Supramolecular and Bio-Inspired Catalysis, Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands.
| | | | - Joost N H Reek
- Homogeneous, Supramolecular and Bio-Inspired Catalysis, Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands.
- InCatT B.V., Science Park 904, 1098 XH Amsterdam, The Netherlands
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7
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Liu HK, Ronson TK, Wu K, Luo D, Nitschke JR. Anionic Templates Drive Conversion between a Zn II9L 6 Tricapped Trigonal Prism and Zn II6L 4 Pseudo-Octahedra. J Am Chem Soc 2023. [PMID: 37440669 PMCID: PMC10375523 DOI: 10.1021/jacs.3c03981] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/15/2023]
Abstract
This work introduces the use of 8-aminoquinoline subcomponents to generate complex three-dimensional structures. Together with a tris(formylpyridine), 8-aminoquinoline condensed around ZnII templates to produce a tris(tridentate) ligand. This ligand is incorporated into either a tricapped trigonal prismatic ZnII9L6 structure or a pair of pseudo-octahedral ZnII6L4 diastereomers, with S4 and D2 symmetries. Introduction of a methyl group onto the aminoquinoline modulated the coordination sphere of ZnII, which favored the ZnII9L6 structure and disfavored the ZnII6L4 assembly. The tricapped trigonal prismatic ZnII9L6 architecture converted into a single ZnII6L4 cage diastereomer following the addition of a dianionic 4,4'-dinitrostilbene-2,2'-disulfonate guest. Four of these guests clustered tightly at the four windows of the ZnII6L4 cage, held in place through electrostatic interactions and hydrogen bonding, stabilize a single diastereomeric configuration with S4 symmetry.
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Affiliation(s)
- Hua-Kui Liu
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K
| | - Tanya K Ronson
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K
| | - Kai Wu
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K
| | - Dong Luo
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K
| | - Jonathan R Nitschke
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K
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8
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Wang KY, Zhang J, Hsu YC, Lin H, Han Z, Pang J, Yang Z, Liang RR, Shi W, Zhou HC. Bioinspired Framework Catalysts: From Enzyme Immobilization to Biomimetic Catalysis. Chem Rev 2023; 123:5347-5420. [PMID: 37043332 PMCID: PMC10853941 DOI: 10.1021/acs.chemrev.2c00879] [Citation(s) in RCA: 48] [Impact Index Per Article: 48.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2022] [Indexed: 04/13/2023]
Abstract
Enzymatic catalysis has fueled considerable interest from chemists due to its high efficiency and selectivity. However, the structural complexity and vulnerability hamper the application potentials of enzymes. Driven by the practical demand for chemical conversion, there is a long-sought quest for bioinspired catalysts reproducing and even surpassing the functions of natural enzymes. As nanoporous materials with high surface areas and crystallinity, metal-organic frameworks (MOFs) represent an exquisite case of how natural enzymes and their active sites are integrated into porous solids, affording bioinspired heterogeneous catalysts with superior stability and customizable structures. In this review, we comprehensively summarize the advances of bioinspired MOFs for catalysis, discuss the design principle of various MOF-based catalysts, such as MOF-enzyme composites and MOFs embedded with active sites, and explore the utility of these catalysts in different reactions. The advantages of MOFs as enzyme mimetics are also highlighted, including confinement, templating effects, and functionality, in comparison with homogeneous supramolecular catalysts. A perspective is provided to discuss potential solutions addressing current challenges in MOF catalysis.
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Affiliation(s)
- Kun-Yu Wang
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
- Department
of Chemistry, Key Laboratory of Advanced Energy Materials Chemistry
(MOE) and Renewable Energy Conversion and Storage Center (RECAST),
College of Chemistry, Nankai University, Tianjin 300071, China
| | - Jiaqi Zhang
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
- Department
of Chemistry, Key Laboratory of Advanced Energy Materials Chemistry
(MOE) and Renewable Energy Conversion and Storage Center (RECAST),
College of Chemistry, Nankai University, Tianjin 300071, China
| | - Yu-Chuan Hsu
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
| | - Hengyu Lin
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
| | - Zongsu Han
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
- Department
of Chemistry, Key Laboratory of Advanced Energy Materials Chemistry
(MOE) and Renewable Energy Conversion and Storage Center (RECAST),
College of Chemistry, Nankai University, Tianjin 300071, China
| | - Jiandong Pang
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
- School
of Materials Science and Engineering, Tianjin Key Laboratory of Metal
and Molecule-Based Material Chemistry, Nankai
University, Tianjin 300350, China
| | - Zhentao Yang
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
- Department
of Chemistry, Key Laboratory of Advanced Energy Materials Chemistry
(MOE) and Renewable Energy Conversion and Storage Center (RECAST),
College of Chemistry, Nankai University, Tianjin 300071, China
| | - Rong-Ran Liang
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
| | - Wei Shi
- Department
of Chemistry, Key Laboratory of Advanced Energy Materials Chemistry
(MOE) and Renewable Energy Conversion and Storage Center (RECAST),
College of Chemistry, Nankai University, Tianjin 300071, China
| | - Hong-Cai Zhou
- Department
of Chemistry, Texas A&M University, College Station, Texas 77843, United States
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9
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Epping RF, Vesseur D, Zhou M, de Bruin B. Carbene Radicals in Transition-Metal-Catalyzed Reactions. ACS Catal 2023; 13:5428-5448. [PMID: 37123600 PMCID: PMC10127290 DOI: 10.1021/acscatal.3c00591] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 03/21/2023] [Indexed: 04/08/2023]
Abstract
Discovered as organometallic curiosities in the 1970s, carbene radicals have become a staple in modern-day homogeneous catalysis. Carbene radicals exhibit nucleophilic radical-type reactivity orthogonal to classical electrophilic diamagnetic Fischer carbenes. Their successful catalytic application has led to the synthesis of a myriad of carbo- and heterocycles, ranging from simple cyclopropanes to more challenging eight-membered rings. The field has matured to employ densely functionalized chiral porphyrin-based platforms that exhibit high enantio-, regio-, and stereoselectivity. Thus far the focus has largely been on cobalt-based systems, but interest has been growing for the past few years to expand the application of carbene radicals to other transition metals. This Perspective covers the advances made since 2011 and gives an overview on the coordination chemistry, reactivity, and catalytic application of carbene radical species using transition metal complexes and catalysts.
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Affiliation(s)
- Roel F.J. Epping
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - David Vesseur
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Minghui Zhou
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Bas de Bruin
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
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10
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Pfrunder MC, Marshall DL, Poad BLJ, Stovell EG, Loomans BI, Blinco JP, Blanksby SJ, McMurtrie JC, Mullen KM. Exploring the Gas-Phase Formation and Chemical Reactivity of Highly Reduced M 8 L 6 Coordination Cages. Angew Chem Int Ed Engl 2022; 61:e202212710. [PMID: 36102176 PMCID: PMC9827999 DOI: 10.1002/anie.202212710] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Indexed: 01/12/2023]
Abstract
Coordination cages with well-defined cavities show great promise in the field of catalysis on account of their unique combination of molecular confinement effects and transition-metal redox chemistry. Here, three coordination cages are reduced from their native 16+ oxidation state to the 2+ state in the gas phase without observable structural degradation. Using this method, the reaction rate constants for each reduction step were determined, with no noticeable differences arising following either the incorporation of a C60 -fullerene guest or alteration of the cage chemical structure. The reactivity of highly reduced cage species toward molecular oxygen is "switched-on" after a threshold number of reduction steps, which is influenced by guest molecules and the structure of cage components. These new experimental approaches provide a unique window to explore the chemistry of highly-reduced cage species that can be modulated by altering their structures and encapsulated guest species.
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Affiliation(s)
- Michael C. Pfrunder
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - David L. Marshall
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- Central Analytical Research Facility (CARF)Queensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - Berwyck L. J. Poad
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
- Central Analytical Research Facility (CARF)Queensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - Ethan G. Stovell
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - Benjamin I. Loomans
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - James P. Blinco
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - Stephen J. Blanksby
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
- Central Analytical Research Facility (CARF)Queensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - John C. McMurtrie
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
| | - Kathleen M. Mullen
- Centre for Materials Science (CFMS)Queensland University of Technology (QUT)2 George StreetBrisbaneQueensland4000Australia
- School of Chemistry and PhysicsQueensland University of Technology2 George StreetBrisbaneQueensland4000Australia
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11
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Li Y, Pelzer K, Sechet D, Creste G, Matt D, Braunstein P, Armspach D. A cavity-shaped cis-chelating P,N ligand for highly selective nickel-catalysed ethylene dimerisation. Dalton Trans 2022; 51:11226-11230. [PMID: 35861279 DOI: 10.1039/d2dt01553f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The presence of a permethylated α-cyclodextrin (α-CD) cavity in a chelating P,N ligand promotes exclusive formation of 1 : 1 ligand/metal complexes. In MX2 complexes, one of the two halido ligands is forced to reside inside the CD hollow while the second one is pointing outside. Unlike its cavity-free analogue, a Ni(II) complex of the CD ligand is a highly selective precatalyst for ethylene dimerisation (96% C4 selectivity with up to 95% of 1-butene within the C4 fraction).
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Affiliation(s)
- Yang Li
- Equipe Confinement Moléculaire et Catalyse, Institut de Chimie de Strasbourg, UMR 7177 CNRS, Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081 Strasbourg Cedex, France.
| | - Katrin Pelzer
- Equipe Confinement Moléculaire et Catalyse, Institut de Chimie de Strasbourg, UMR 7177 CNRS, Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081 Strasbourg Cedex, France.
| | - Damien Sechet
- Laboratoire de Chimie Inorganique Moléculaire et Catalyse, Institut de Chimie de Strasbourg, UMR 7177 CNRS, Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081 Strasbourg Cedex, France
| | - Geordie Creste
- Equipe Confinement Moléculaire et Catalyse, Institut de Chimie de Strasbourg, UMR 7177 CNRS, Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081 Strasbourg Cedex, France.
| | - Dominique Matt
- Laboratoire de Chimie Inorganique Moléculaire et Catalyse, Institut de Chimie de Strasbourg, UMR 7177 CNRS, Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081 Strasbourg Cedex, France
| | - Pierre Braunstein
- Equipe Confinement Moléculaire et Catalyse, Institut de Chimie de Strasbourg, UMR 7177 CNRS, Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081 Strasbourg Cedex, France.
| | - Dominique Armspach
- Equipe Confinement Moléculaire et Catalyse, Institut de Chimie de Strasbourg, UMR 7177 CNRS, Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081 Strasbourg Cedex, France.
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12
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McTernan C, Davies JA, Nitschke JR. Beyond Platonic: How to Build Metal-Organic Polyhedra Capable of Binding Low-Symmetry, Information-Rich Molecular Cargoes. Chem Rev 2022; 122:10393-10437. [PMID: 35436092 PMCID: PMC9185692 DOI: 10.1021/acs.chemrev.1c00763] [Citation(s) in RCA: 84] [Impact Index Per Article: 42.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Indexed: 12/17/2022]
Abstract
The field of metallosupramolecular chemistry has advanced rapidly in recent years. Much work in this area has focused on the formation of hollow self-assembled metal-organic architectures and exploration of the applications of their confined nanospaces. These discrete, soluble structures incorporate metal ions as 'glue' to link organic ligands together into polyhedra.Most of the architectures employed thus far have been highly symmetrical, as these have been the easiest to prepare. Such high-symmetry structures contain pseudospherical cavities, and so typically bind roughly spherical guests. Biomolecules and high-value synthetic compounds are rarely isotropic, highly-symmetrical species. To bind, sense, separate, and transform such substrates, new, lower-symmetry, metal-organic cages are needed. Herein we summarize recent approaches, which taken together form the first draft of a handbook for the design of higher-complexity, lower-symmetry, self-assembled metal-organic architectures.
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Affiliation(s)
| | | | - Jonathan R. Nitschke
- Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
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13
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Gutiérrez S, Tomás-Gamasa M, Mascareñas JL. Organometallic catalysis in aqueous and biological environments: harnessing the power of metal carbenes. Chem Sci 2022; 13:6478-6495. [PMID: 35756533 PMCID: PMC9172117 DOI: 10.1039/d2sc00721e] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Accepted: 05/15/2022] [Indexed: 11/24/2022] Open
Abstract
Translating the power of transition metal catalysis to the native habitats of enzymes can significantly expand the possibilities of interrogating or manipulating natural biological systems, including living cells and organisms. This is especially relevant for organometallic reactions that have shown great potential in the field of organic synthesis, like the metal-catalyzed transfer of carbenes. While, at first sight, performing metal carbene chemistry in aqueous solvents, and especially in biologically relevant mixtures, does not seem obvious, in recent years there has been a growing number of reports demonstrating the feasibility of the task. Either using small molecule metal catalysts or artificial metalloenzymes, a number of carbene transfer reactions that tolerate aqueous and biorelevant media are being developed. This review intends to summarize the most relevant contributions, and establish the state of the art in this emerging research field.
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Affiliation(s)
- Sara Gutiérrez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
| | - María Tomás-Gamasa
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
| | - José Luis Mascareñas
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela 15705 Santiago de Compostela Spain
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14
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Xue W, Ronson TK, Lu Z, Nitschke JR. Solvent Drives Switching between Λ and Δ Metal Center Stereochemistry of M 8L 6 Cubic Cages. J Am Chem Soc 2022; 144:6136-6142. [PMID: 35364808 PMCID: PMC9098163 DOI: 10.1021/jacs.2c00245] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
![]()
An
enantiopure ligand with four bidentate metal-binding sites and
four (S)-carbon stereocenters self-assembles with
octahedral ZnII or CoII to produce O-symmetric M8L6 coordination cages. The Λ-
or Δ-handedness of the metal centers forming the corners of
these cages is determined by the solvent environment: the same (S)-ligand produces one diastereomer, (S)24-Λ8-M8L6, in
acetonitrile but another with opposite metal-center handedness, (S)24-Δ8-M8L6, in nitromethane. Van ’t Hoff analysis revealed the Δ
stereochemical configuration to be entropically favored but enthalpically
disfavored, consistent with a loosening of the coordination sphere
and an increase in conformational freedom following Λ-to-Δ
transition. The binding of 4,4′-dipyridyl naphthalenediimide
and tetrapyridyl Zn-porphyrin guests did not interfere with the solvent-driven
stereoselectivity of self-assembly, suggesting applications where
either a Λ- or Δ-handed framework may enable chiral separations
or catalysis.
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Affiliation(s)
- Weichao Xue
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Tanya K Ronson
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Zifei Lu
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Jonathan R Nitschke
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
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15
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Kalikadien AV, Pidko EA, Sinha V. ChemSpaX: exploration of chemical space by automated functionalization of molecular scaffold. DIGITAL DISCOVERY 2022; 1:8-25. [PMID: 35340336 PMCID: PMC8887922 DOI: 10.1039/d1dd00017a] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Accepted: 12/23/2021] [Indexed: 12/19/2022]
Abstract
Exploration of the local chemical space of molecular scaffolds by post-functionalization (PF) is a promising route to discover novel molecules with desired structure and function. PF with rationally chosen substituents based on known electronic and steric properties is a commonly used experimental and computational strategy in screening, design and optimization of catalytic scaffolds. Automated generation of reasonably accurate geometric representations of post-functionalized molecular scaffolds is highly desirable for data-driven applications. However, automated PF of transition metal (TM) complexes remains challenging. In this work a Python-based workflow, ChemSpaX, that is aimed at automating the PF of a given molecular scaffold with special emphasis on TM complexes, is introduced. In three representative applications of ChemSpaX by comparing with DFT and DFT-B calculations, we show that the generated structures have a reasonable quality for use in computational screening applications. Furthermore, we show that ChemSpaX generated geometries can be used in machine learning applications to accurately predict DFT computed HOMO-LUMO gaps for transition metal complexes. ChemSpaX is open-source and aims to bolster and democratize the efforts of the scientific community towards data-driven chemical discovery.
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Affiliation(s)
- Adarsh V Kalikadien
- Inorganic Systems Engineering, Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology Van der Maasweg 9 2629 HZ Delft The Netherlands
| | - Evgeny A Pidko
- Inorganic Systems Engineering, Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology Van der Maasweg 9 2629 HZ Delft The Netherlands
| | - Vivek Sinha
- Inorganic Systems Engineering, Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology Van der Maasweg 9 2629 HZ Delft The Netherlands
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16
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Abstract
In recent years, visible light-induced transition metal catalysis has emerged as a new paradigm in organic photocatalysis, which has led to the discovery of unprecedented transformations as well as the improvement of known reactions. In this subfield of photocatalysis, a transition metal complex serves a double duty by harvesting photon energy and then enabling bond forming/breaking events mostly via a single catalytic cycle, thus contrasting the established dual photocatalysis in which an exogenous photosensitizer is employed. In addition, this approach often synergistically combines catalyst-substrate interaction with photoinduced process, a feature that is uncommon in conventional photoredox chemistry. This Review describes the early development and recent advances of this emerging field.
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Affiliation(s)
- Kelvin Pak Shing Cheung
- Department of Chemistry and Biochemistry, The University of Texas at Dallas, Richardson, Texas 75080, United States
| | - Sumon Sarkar
- Department of Chemistry and Biochemistry, The University of Texas at Dallas, Richardson, Texas 75080, United States
| | - Vladimir Gevorgyan
- Department of Chemistry and Biochemistry, The University of Texas at Dallas, Richardson, Texas 75080, United States
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17
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Meijide Suárez J, Bistri‐Aslanoff O, Roland S, Sollogoub M. Cavity‐Controlled Coordination of Square Planar Metal Complexes and Substrate Selectivity by NHC‐Capped Cyclodextrins (ICyDs). ChemCatChem 2021. [DOI: 10.1002/cctc.202101411] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Jorge Meijide Suárez
- Sorbonne Université CNRSInstitut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Olivia Bistri‐Aslanoff
- Sorbonne Université CNRSInstitut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Sylvain Roland
- Sorbonne Université CNRSInstitut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Matthieu Sollogoub
- Sorbonne Université CNRSInstitut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
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18
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Blackburn PT, Mansoor IF, Dutton KG, Tyryshkin AM, Lipke MC. Accessing three oxidation states of cobalt in M 6L 3 nanoprisms with cobalt-porphyrin walls. Chem Commun (Camb) 2021; 57:11342-11345. [PMID: 34642705 DOI: 10.1039/d1cc04860k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Nanocages with porphyrin walls are common, but studies of such structures hosting redox-active metals are rare. Pt2+-linked M6L3 nanoprisms with cobalt-porphyrin walls were prepared and their redox properties were evaluated electrochemically and chemically, leading to the first time that cobalt-porphyrin nanocages have been characterized in CoI, CoII, and CoIII states.
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Affiliation(s)
- P Thomas Blackburn
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, New Jersey 08854, USA.
| | - Iram F Mansoor
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, New Jersey 08854, USA.
| | - Kaitlyn G Dutton
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, New Jersey 08854, USA.
| | - Alexei M Tyryshkin
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, New Jersey 08854, USA.
| | - Mark C Lipke
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, New Jersey 08854, USA.
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19
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Mouarrawis V, Bobylev EO, Bruin B, Reek JNH. Controlling the Activity of a Caged Cobalt‐Porphyrin‐Catalyst in Cyclopropanation Reactions with Peripheral Cage Substituents. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202100384] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Valentinos Mouarrawis
- Homogeneous and Supramolecular Catalysis Group Van' t Hoff Institute for Molecular Science (HIMS) University of Amsterdam (UvA) Science Park 904 1098 XH Amsterdam The Netherlands
| | - Eduard O. Bobylev
- Homogeneous and Supramolecular Catalysis Group Van' t Hoff Institute for Molecular Science (HIMS) University of Amsterdam (UvA) Science Park 904 1098 XH Amsterdam The Netherlands
| | - Bas Bruin
- Homogeneous and Supramolecular Catalysis Group Van' t Hoff Institute for Molecular Science (HIMS) University of Amsterdam (UvA) Science Park 904 1098 XH Amsterdam The Netherlands
| | - Joost N. H. Reek
- Homogeneous and Supramolecular Catalysis Group Van' t Hoff Institute for Molecular Science (HIMS) University of Amsterdam (UvA) Science Park 904 1098 XH Amsterdam The Netherlands
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20
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Olivo G, Capocasa G, Del Giudice D, Lanzalunga O, Di Stefano S. New horizons for catalysis disclosed by supramolecular chemistry. Chem Soc Rev 2021; 50:7681-7724. [PMID: 34008654 DOI: 10.1039/d1cs00175b] [Citation(s) in RCA: 74] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The adoption of a supramolecular approach in catalysis promises to address a number of unmet challenges, ranging from activity (unlocking of novel reaction pathways) to selectivity (alteration of the innate selectivity of a reaction, e.g. selective functionalization of C-H bonds) and regulation (switch ON/OFF, sequential catalysis, etc.). Supramolecular tools such as reversible association and recognition, pre-organization of reactants and stabilization of transition states upon binding offer a unique chance to achieve the above goals disclosing new horizons whose potential is being increasingly recognized and used, sometimes reaching the degree of ripeness for practical use. This review summarizes the main developments that have opened such new frontiers, with the aim of providing a guide to researchers approaching the field. We focus on artificial supramolecular catalysts of defined stoichiometry which, under homogeneous conditions, unlock outcomes that are highly difficult if not impossible to attain otherwise, namely unnatural reactivity or selectivity and catalysis regulation. The different strategies recently explored in supramolecular catalysis are concisely presented, and, for each one, a single or very few examples is/are described (mainly last 10 years, with only milestone older works discussed). The subject is divided into four sections in light of the key design principle: (i) nanoconfinement of reactants, (ii) recognition-driven catalysis, (iii) catalysis regulation by molecular machines and (iv) processive catalysis.
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Affiliation(s)
- Giorgio Olivo
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Giorgio Capocasa
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Daniele Del Giudice
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Osvaldo Lanzalunga
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Stefano Di Stefano
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
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21
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van Leest N, de Bruin B. Revisiting the Electronic Structure of Cobalt Porphyrin Nitrene and Carbene Radicals with NEVPT2-CASSCF Calculations: Doublet versus Quartet Ground States. Inorg Chem 2021; 60:8380-8387. [PMID: 34096281 PMCID: PMC8220492 DOI: 10.1021/acs.inorgchem.1c00910] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2021] [Indexed: 12/23/2022]
Abstract
Cobalt porphyrin complexes are established catalysts for carbene and nitrene radical group-transfer reactions. The key carbene and mono- and bisnitrene radical complexes coordinated to [Co(TPP)] (TPP = tetraphenylporphyrin) have previously been investigated with a variety of experimental techniques and supporting (single-reference) density functional theory (DFT) calculations that indicated doublet (S = 1/2) ground states for all three species. In this contribution, we revisit their electronic structures with multireference N-electron valence state perturbation theory (NEVPT2)-complete-active-space self-consistent-field (CASSCF) calculations to investigate possible multireference contributions to the ground-state wave functions. The carbene ([CoIII(TPP)(•CHCO2Et)]) and mononitrene ([CoIII(TPP)(•NNs)]) radical complexes were confirmed to have uncomplicated doublet ground states, although a higher carbene or nitrene radical character and a lower Co-C/N bond order was found in the NEVPT2-CASSCF calculations. Supported by electron paramagnetic resonance analysis and spin counting, paramagnetic molar susceptibility determination, and NEVPT2-CASSCF calculations, we report that the cobalt porphyrin bisnitrene complex ([CoIII(TPP•)(•NNs)2]) has a quartet (S = 3/2) spin ground state, with a thermally accesible multireference and multideterminant "broken-symmetry" doublet spin excited state. A spin flip on the porphyrin-centered unpaired electron allows for interconversion between the quartet and broken-symmetry doublet spin states, with an approximate 10-fold higher Boltzmann population of the quartet at room temperature.
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Affiliation(s)
- Nicolaas
P. van Leest
- Homogeneous, Supramolecular
and Bio-Inspired Catalysis Group, Van ’t Hoff Institute for
Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Bas de Bruin
- Homogeneous, Supramolecular
and Bio-Inspired Catalysis Group, Van ’t Hoff Institute for
Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
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22
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Mouarrawis V, Bobylev EO, de Bruin B, Reek JNH. A Novel M 8 L 6 Cubic Cage That Binds Tetrapyridyl Porphyrins: Cage and Solvent Effects in Cobalt-Porphyrin-Catalyzed Cyclopropanation Reactions. Chemistry 2021; 27:8390-8397. [PMID: 33780040 PMCID: PMC8252039 DOI: 10.1002/chem.202100344] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Indexed: 12/17/2022]
Abstract
Confinement of a catalyst can have a significant impact on catalytic performance and can lead to otherwise difficult to achieve catalyst properties. Herein, we report the design and synthesis of a novel caged catalyst system Co-G@Fe8 (Zn-L ⋅ 1)6 , which is soluble in both polar and apolar solvents without the necessity of any post-functionalization. This is a rare example of a metal-coordination cage able to bind catalytically active porphyrins that is soluble in solvents spanning a wide variety of polarity. This system was used to investigate the combined effects of the solvent and the cage on the catalytic performance in the cobalt catalyzed cyclopropanation of styrene, which involves radical intermediates. Kinetic studies show that DMF has a protective influence on the catalyst, slowing down deactivation of both [Co(TPP)] and Co-G@Fe8 (Zn-L ⋅ 1)6 , leading to higher TONs in this solvent. Moreover, DFT studies on the [Co(TPP)] catalyst show that the rate determining energy barrier of this radical-type transformation is not influenced by the coordination of DMF. As such, the increased TONs obtained experimentally stem from the stabilizing effect of DMF and are not due to an intrinsic higher activity caused by axial ligand binding to the cobalt center ([Co(TPP)(L)]). Remarkably, encapsulation of Co-G led to a three times more active catalyst than [Co(TPP)] (TOFini ) and a substantially increased TON compared to both [Co(TPP)] and free Co-G. The increased local concentration of the substrates in the hydrophobic cage compared to the bulk explains the observed higher catalytic activities.
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Affiliation(s)
- Valentinos Mouarrawis
- Homogeneous and Supramolecular Catalysis Group, Van' t Hoff Institute for Molecular Science (HIMS), University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Eduard O Bobylev
- Homogeneous and Supramolecular Catalysis Group, Van' t Hoff Institute for Molecular Science (HIMS), University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Bas de Bruin
- Homogeneous and Supramolecular Catalysis Group, Van' t Hoff Institute for Molecular Science (HIMS), University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Joost N H Reek
- Homogeneous and Supramolecular Catalysis Group, Van' t Hoff Institute for Molecular Science (HIMS), University of Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
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23
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Percástegui E, Ronson TK, Nitschke JR. Design and Applications of Water-Soluble Coordination Cages. Chem Rev 2020; 120:13480-13544. [PMID: 33238092 PMCID: PMC7760102 DOI: 10.1021/acs.chemrev.0c00672] [Citation(s) in RCA: 238] [Impact Index Per Article: 59.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Indexed: 12/23/2022]
Abstract
Compartmentalization of the aqueous space within a cell is necessary for life. In similar fashion to the nanometer-scale compartments in living systems, synthetic water-soluble coordination cages (WSCCs) can isolate guest molecules and host chemical transformations. Such cages thus show promise in biological, medical, environmental, and industrial domains. This review highlights examples of three-dimensional synthetic WSCCs, offering perspectives so as to enhance their design and applications. Strategies are presented that address key challenges for the preparation of coordination cages that are soluble and stable in water. The peculiarities of guest binding in aqueous media are examined, highlighting amplified binding in water, changing guest properties, and the recognition of specific molecular targets. The properties of WSCC hosts associated with biomedical applications, and their use as vessels to carry out chemical reactions in water, are also presented. These examples sketch a blueprint for the preparation of new metal-organic containers for use in aqueous solution, as well as guidelines for the engineering of new applications in water.
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Affiliation(s)
- Edmundo
G. Percástegui
- Department
of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United
Kingdom
- Instituto
de Química, Ciudad UniversitariaUniversidad
Nacional Autónoma de México, Ciudad de México 04510, México
- Centro
Conjunto de Investigación en Química Sustentable, UAEM-UNAM, Carretera Toluca-Atlacomulco Km 14.5, Toluca, 50200 Estado de México, México
| | - Tanya K. Ronson
- Department
of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United
Kingdom
| | - Jonathan R. Nitschke
- Department
of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United
Kingdom
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24
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Noto N, Hyodo Y, Yoshizawa M, Koike T, Akita M. Transition Metal-Free Supramolecular Photoredox Catalysis in Water: A Phenoxazine Photocatalyst Encapsulated in V-Shaped Aromatic Amphiphiles. ACS Catal 2020. [DOI: 10.1021/acscatal.0c04221] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Naoki Noto
- School of Materials and Chemical Technology, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
| | - Yuki Hyodo
- School of Materials and Chemical Technology, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
| | - Michito Yoshizawa
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
- School of Materials and Chemical Technology, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
| | - Takashi Koike
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
- School of Materials and Chemical Technology, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
| | - Munetaka Akita
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
- School of Materials and Chemical Technology, Tokyo Institute of Technology, R1-27, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
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25
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Abstract
Three- and four-membered rings, widespread motifs in nature and medicinal chemistry, have fascinated chemists ever since their discovery. However, due to energetic considerations, small rings are often difficult to assemble. In this regard, homogeneous gold catalysis has emerged as a powerful tool to construct these highly strained carbocycles. This review aims to provide a comprehensive summary of all the major advances and discoveries made in the gold-catalyzed synthesis of cyclopropanes, cyclopropenes, cyclobutanes, cyclobutenes, and their corresponding heterocyclic or heterosubstituted analogs.
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Affiliation(s)
- Mauro Mato
- Institute of Chemical Research of Catalonia (ICIQ), Barcelona Institute of Science and Technology, Av. Països Catalans 16, 43007 Tarragona, Spain.,Departament de Quı́mica Analı́tica i Quı́mica Orgànica, Universitat Rovira i Virgili, C/Marcel·li Domingo s/n, 43007 Tarragona, Spain
| | - Allegra Franchino
- Institute of Chemical Research of Catalonia (ICIQ), Barcelona Institute of Science and Technology, Av. Països Catalans 16, 43007 Tarragona, Spain.,Departament de Quı́mica Analı́tica i Quı́mica Orgànica, Universitat Rovira i Virgili, C/Marcel·li Domingo s/n, 43007 Tarragona, Spain
| | - Cristina Garcı A-Morales
- Institute of Chemical Research of Catalonia (ICIQ), Barcelona Institute of Science and Technology, Av. Països Catalans 16, 43007 Tarragona, Spain.,Departament de Quı́mica Analı́tica i Quı́mica Orgànica, Universitat Rovira i Virgili, C/Marcel·li Domingo s/n, 43007 Tarragona, Spain
| | - Antonio M Echavarren
- Institute of Chemical Research of Catalonia (ICIQ), Barcelona Institute of Science and Technology, Av. Països Catalans 16, 43007 Tarragona, Spain.,Departament de Quı́mica Analı́tica i Quı́mica Orgànica, Universitat Rovira i Virgili, C/Marcel·li Domingo s/n, 43007 Tarragona, Spain
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26
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Zhu X, Xu G, Chamoreau L, Zhang Y, Mouriès‐Mansuy V, Fensterbank L, Bistri‐Aslanoff O, Roland S, Sollogoub M. Permethylated NHC‐Capped α‐ and β‐Cyclodextrins (ICyD
Me
) Regioselective and Enantioselective Gold‐Catalysis in Pure Water. Chemistry 2020; 26:15901-15909. [DOI: 10.1002/chem.202001990] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 05/29/2020] [Indexed: 01/21/2023]
Affiliation(s)
- Xiaolei Zhu
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Guangcan Xu
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Lise‐Marie Chamoreau
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Yongmin Zhang
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Virginie Mouriès‐Mansuy
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Louis Fensterbank
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Olivia Bistri‐Aslanoff
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Sylvain Roland
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
| | - Matthieu Sollogoub
- Sorbonne Université CNRS Institut Parisien de Chimie Moléculaire (IPCM) UMR 8232 4, place Jussieu 75005 Paris France
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27
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Masteri-Farahani M, Rahimi M, Hosseini MS. Heterogenization of porphyrin complexes within the nanocages of SBA-16: New efficient and stable catalysts for the epoxidation of olefins. Colloids Surf A Physicochem Eng Asp 2020. [DOI: 10.1016/j.colsurfa.2020.125229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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28
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Ueda M, Kimura M, Miyagawa S, Takaya H, Naito M, Tokunaga Y. A Five-layer π-Aromatic Structure Formed through Self-assembly of a Porphyrin Trimer and Two Aromatic Guests. Chem Asian J 2020; 15:2212-2217. [PMID: 32483880 DOI: 10.1002/asia.202000452] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Revised: 05/19/2020] [Indexed: 11/09/2022]
Abstract
In this study we synthesized two- and four-armed porphyrins - bearing two carboxyl and four 2-aminoquinolino functionalities, respectively, at their meso positions - as a complementary hydrogen bonding pair for the self-assembly of a D2 -symmetric porphyrin trimer host. Two units of the two-armed porphyrin and one unit of the four-armed porphyrin self-assembled quantitatively into the D2 -symmetric porphyrin trimer, stabilized through ammidinium-carboxylate salt bridge formation, in CH2 Cl2 and CHCl3 . The porphyrin trimer host gradually bound two units of 1,3,5-trinitrobenzene between the pair of porphyrin units, forming a five-layer aromatic structure. At temperatures below -40 °C, the rates of association and dissociation of the complexes were slow on the NMR spectroscopic time scale, allowing the 1 : 1 and 1 : 2 complexes of the trimer host and trinitrobenzene guest(s) to be detected independently when using less than 2 eq of trinitrobenzene. Vis titration experiments revealed the values of K1 (2.1±0.4×105 M-1 ) and K2 (2.2±0.06×104 M-1 ) in CHCl3 at room temperature.
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Affiliation(s)
- Masahiro Ueda
- Department of Materials Science and Engineering Faculty of Engineering, University of Fukui Bunkyo, Fukui, 910-8507, Japan
| | - Masaki Kimura
- Department of Materials Science and Engineering Faculty of Engineering, University of Fukui Bunkyo, Fukui, 910-8507, Japan
| | - Shinobu Miyagawa
- Department of Materials Science and Engineering Faculty of Engineering, University of Fukui Bunkyo, Fukui, 910-8507, Japan
| | - Hikaru Takaya
- International Research Center for Elements Science Institute for Chemical Research, Kyoto University, Uji, 611-0011, Japan
| | - Masaya Naito
- Department of Materials Science and Engineering Faculty of Engineering, University of Fukui Bunkyo, Fukui, 910-8507, Japan
| | - Yuji Tokunaga
- Department of Materials Science and Engineering Faculty of Engineering, University of Fukui Bunkyo, Fukui, 910-8507, Japan
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29
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Covalent Functionalization of Nanodiamonds by Ruthenium Porphyrin, and Their Catalytic Activity in the Cyclopropanation Reaction of Olefins. Catalysts 2020. [DOI: 10.3390/catal10060666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Detonation nanodiamonds (DNDs) were functionalized by ruthenium porphyrins and used as catalysts in the cyclopropanation reaction of olefins. The heterogeneous catalyst was characterized by transmission electron microscopy (TEM), scanning electron microscopy (SEM), and XPS (X-ray photoelectron spectroscopy). The XPS was used to control the binding of the ruthenium porphyrin to the DNDs’ surface. This catalyst was used in the cyclopropanation reactions of simple olefins and was reused with no loss of activity in four consecutive cycles, after recovering each time by simple centrifugation.
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30
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Alcântara AFP, Fontana LA, Almeida MP, Rigolin VH, Ribeiro MA, Barros WP, Megiatto JD. Control over the Redox Cooperative Mechanism of Radical Carbene Transfer Reactions for the Efficient Active‐Metal‐Template Synthesis of [2]Rotaxanes. Chemistry 2020; 26:7808-7822. [DOI: 10.1002/chem.201905602] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2019] [Indexed: 02/01/2023]
Affiliation(s)
- Arthur F. P. Alcântara
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
- Instituto Federal do Sertão Pernambucano Estrada do Tamboril 56200-000 Ouricuri Brazil
| | - Liniquer A. Fontana
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Marlon P. Almeida
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Vitor H. Rigolin
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Marcos A. Ribeiro
- Departamento de QuímicaUniversidade Federal do Espírito Santo Av. Fernando Ferrari, 514 29075-910 Vitória Brazil
| | - Wdeson P. Barros
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
| | - Jackson D. Megiatto
- Institute of ChemistryUniversity of Campinas (UNICAMP) PO Box 6154 13083-970 Campinas Brazil
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31
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van Vliet KM, van Leeuwen NS, Brouwer AM, de Bruin B. Visible-light-induced addition of carboxymethanide to styrene from monochloroacetic acid. Beilstein J Org Chem 2020; 16:398-408. [PMID: 32273903 PMCID: PMC7113555 DOI: 10.3762/bjoc.16.38] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Accepted: 03/05/2020] [Indexed: 11/23/2022] Open
Abstract
Where monochloroacetic acid is widely used as a starting material for the synthesis of relevant groups of compounds, many of these synthetic procedures are based on nucleophilic substitution of the carbon chlorine bond. Oxidative or reductive activation of monochloroacetic acid results in radical intermediates, leading to reactivity different from the traditional reactivity of this compound. Here, we investigated the possibility of applying monochloroacetic acid as a substrate for photoredox catalysis with styrene to directly produce γ-phenyl-γ-butyrolactone. Instead of using nucleophilic substitution, we cleaved the carbon chlorine bond by single-electron reduction, creating a radical species. We observed that the reaction works best in nonpolar solvents. The reaction does not go to full conversion, but selectively forms γ-phenyl-γ-butyrolactone and 4-chloro-4-phenylbutanoic acid. Over time the catalyst precipitates from solution (perhaps in a decomposed form in case of fac-[Ir(ppy)3]), which was proven by mass spectrometry and EPR spectroscopy for one of the catalysts (N,N-5,10-di(2-naphthalene)-5,10-dihydrophenazine) used in this work. The generation of HCl resulting from lactone formation could be an additional problem for organometallic photoredox catalysts used in this reaction. In an attempt to trap one of the radical intermediates with TEMPO, we observed a compound indicating the generation of a chloromethyl radical.
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Affiliation(s)
- Kaj M van Vliet
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Nicole S van Leeuwen
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Albert M Brouwer
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Bas de Bruin
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
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32
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Xu G, Leloux S, Zhang P, Meijide Suárez J, Zhang Y, Derat E, Ménand M, Bistri‐Aslanoff O, Roland S, Leyssens T, Riant O, Sollogoub M. Capturing the Monomeric (L)CuH in NHC‐Capped Cyclodextrin: Cavity‐Controlled Chemoselective Hydrosilylation of α,β‐Unsaturated Ketones. Angew Chem Int Ed Engl 2020; 59:7591-7597. [DOI: 10.1002/anie.202001733] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Indexed: 01/05/2023]
Affiliation(s)
- Guangcan Xu
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Sébastien Leloux
- Institute of Condensed Matter and Nanosciences (IMCN), Molecules, Solids and Reactivity (MOST)Université Catholique de Louvain (UCL) Place Louis Pasteur 1 1348 Louvain-La-Neuve Belgium
| | - Pinglu Zhang
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Jorge Meijide Suárez
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Yongmin Zhang
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Etienne Derat
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Mickaël Ménand
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Olivia Bistri‐Aslanoff
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Sylvain Roland
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
| | - Tom Leyssens
- Institute of Condensed Matter and Nanosciences (IMCN), Molecules, Solids and Reactivity (MOST)Université Catholique de Louvain (UCL) Place Louis Pasteur 1 1348 Louvain-La-Neuve Belgium
| | - Olivier Riant
- Institute of Condensed Matter and Nanosciences (IMCN), Molecules, Solids and Reactivity (MOST)Université Catholique de Louvain (UCL) Place Louis Pasteur 1 1348 Louvain-La-Neuve Belgium
| | - Matthieu Sollogoub
- Sorbonne UniversitéCNRSInstitut Parisien de Chimie Moléculaire (IPCM)UMR 8232 4, place Jussieu 75005 Paris France
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33
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Capturing the Monomeric (L)CuH in NHC‐Capped Cyclodextrin: Cavity‐Controlled Chemoselective Hydrosilylation of α,β‐Unsaturated Ketones. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202001733] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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34
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Iizuka F, Ube H, Sato H, Nakamura T, Shionoya M. Self-assembled Porphyrin-based Cage Complexes, M 11L 6 (M = Zn II, Cd II), with Inner Coordination Sites in Their Crystal Structure. CHEM LETT 2020. [DOI: 10.1246/cl.190943] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Fumiya Iizuka
- The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Hitoshi Ube
- The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Hiroyasu Sato
- Rigaku Corporation, 3-9-12 Matsubaracho, Akishima, Tokyo 196-8666, Japan
| | - Takashi Nakamura
- The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
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35
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Coordination-driven assemblies based on meso-substituted porphyrins: Metal-organic cages and a new type of meso-metallaporphyrin macrocycles. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2019.213165] [Citation(s) in RCA: 44] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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36
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Wang CY, Han JB, Wang L, Tang XY. Lewis Acid Catalyzed [4 + 2] Cycloaddition of N-Tosylhydrazones with ortho-Quinone Methides. J Org Chem 2019; 84:14258-14269. [PMID: 31599153 DOI: 10.1021/acs.joc.9b02040] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
A formal [4 + 2] cycloaddition of N-tosylhydrazones with ortho-quinone methides was developed, affording the facile synthesis of diverse 1,3-oxazine derivatives under mild conditions. In this transformation, N-tosylhydrazones are used as a 1,2-dipole synthon under base-free conditions. Moreover, the substrate scope is broad, and the products are formed with high diastereoselectivities in most of the cases.
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Affiliation(s)
- Chun-Ying Wang
- School of Chemistry and Chemical Engineering, Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Key Laboratory of Material Chemistry for Energy Conversion and Storage , Huazhong University of Science and Technology , 1037 Luoyu Road , Wuhan 430074 , People's Republic of China
| | - Jia-Bin Han
- School of Chemistry and Chemical Engineering, Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Key Laboratory of Material Chemistry for Energy Conversion and Storage , Huazhong University of Science and Technology , 1037 Luoyu Road , Wuhan 430074 , People's Republic of China
| | - Long Wang
- School of Chemistry and Chemical Engineering, Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Key Laboratory of Material Chemistry for Energy Conversion and Storage , Huazhong University of Science and Technology , 1037 Luoyu Road , Wuhan 430074 , People's Republic of China
| | - Xiang-Ying Tang
- School of Chemistry and Chemical Engineering, Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Key Laboratory of Material Chemistry for Energy Conversion and Storage , Huazhong University of Science and Technology , 1037 Luoyu Road , Wuhan 430074 , People's Republic of China
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37
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Zirconium (IV) porphyrin graphene oxide: a new and efficient catalyst for the synthesis of 3,4‐dihydropyrimidin‐2(1H)‐ones. Appl Organomet Chem 2019. [DOI: 10.1002/aoc.5091] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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38
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Gao WX, Zhang HN, Jin GX. Supramolecular catalysis based on discrete heterometallic coordination-driven metallacycles and metallacages. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2019.01.023] [Citation(s) in RCA: 117] [Impact Index Per Article: 23.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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39
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40
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Gonell S, Caumes X, Orth N, Ivanović-Burmazović I, Reek JNH. Self-assembled M 12L 24 nanospheres as a reaction vessel to facilitate a dinuclear Cu(i) catalyzed cyclization reaction. Chem Sci 2019; 10:1316-1321. [PMID: 30809346 PMCID: PMC6354833 DOI: 10.1039/c8sc03767a] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Accepted: 11/12/2018] [Indexed: 11/21/2022] Open
Abstract
The application of large M12L24 nanospheres allows the pre-concentration of catalysts to reach high local concentrations, facilitating reactions that proceed through dinuclear mechanisms. The mechanism of the copper(i)-catalyzed cyclization of 4-pentynoic acid has been elucidated by means of a detailed mechanistic study. The kinetics of the reaction show a higher order in copper, indicating the formation of a bis-Cu intermediate as the key rate determining step of the reaction. This intermediate was further identified during catalysis by CIS-HRMS analysis of the reaction mixture. Based on the mechanistic findings, an M12L24 nanosphere was applied that can bind up to 12 copper catalysts by hydrogen bonding. This pre-organization of copper catalysts in the nanosphere results in a high local concentration of copper leading to higher reaction rates and turnover numbers as the dinuclear pathway is favored.
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Affiliation(s)
- Sergio Gonell
- Homogeneous, Supramolecular and Bio-Inspired Catalysis , Van 't Hoff Institute for Molecular Sciences , University of Amsterdam , Science Park 904 , Amsterdam 1098XH , The Netherlands .
| | - Xavier Caumes
- Homogeneous, Supramolecular and Bio-Inspired Catalysis , Van 't Hoff Institute for Molecular Sciences , University of Amsterdam , Science Park 904 , Amsterdam 1098XH , The Netherlands .
| | - Nicole Orth
- Lehrstuhl für Bioanorganische Chemie , Department Chemie und Pharmazie Friedrich-Alexander-Universität Erlangen , Egerlandstrasse 3 , Erlangen 91058 , Germany
| | - Ivana Ivanović-Burmazović
- Lehrstuhl für Bioanorganische Chemie , Department Chemie und Pharmazie Friedrich-Alexander-Universität Erlangen , Egerlandstrasse 3 , Erlangen 91058 , Germany
| | - Joost N H Reek
- Homogeneous, Supramolecular and Bio-Inspired Catalysis , Van 't Hoff Institute for Molecular Sciences , University of Amsterdam , Science Park 904 , Amsterdam 1098XH , The Netherlands .
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41
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Covalently Copper(II) Porphyrin Cross-Linked Graphene Oxide: Preparation and Catalytic Activity. Catal Letters 2019. [DOI: 10.1007/s10562-019-02665-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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42
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Nurttila SS, Brenner W, Mosquera J, van Vliet KM, Nitschke JR, Reek JNH. Size-Selective Hydroformylation by a Rhodium Catalyst Confined in a Supramolecular Cage. Chemistry 2019; 25:609-620. [PMID: 30351486 PMCID: PMC6391983 DOI: 10.1002/chem.201804333] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2018] [Revised: 10/19/2018] [Indexed: 12/28/2022]
Abstract
Size-selective hydroformylation of terminal alkenes was attained upon embedding a rhodium bisphosphine complex in a supramolecular metal-organic cage that was formed by subcomponent self-assembly. The catalyst was bound in the cage by a ligand-template approach, in which pyridyl-zinc(II) porphyrin interactions led to high association constants (>105 m-1 ) for the binding of the ligands and the corresponding rhodium complex. DFT calculations confirm that the second coordination sphere forces the encapsulated active species to adopt the ee coordination geometry (i.e., both phosphine ligands in equatorial positions), in line with in situ high-pressure IR studies of the host-guest complex. The window aperture of the cage decreases slightly upon binding the catalyst. As a result, the diffusion of larger substrates into the cage is slower compared to that of smaller substrates. Consequently, the encapsulated rhodium catalyst displays substrate selectivity, converting smaller substrates faster to the corresponding aldehydes. This selectivity bears a resemblance to an effect observed in nature, where enzymes are able to discriminate between substrates based on shape and size by embedding the active site deep inside the hydrophobic pocket of a bulky protein structure.
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Affiliation(s)
- Sandra S. Nurttila
- Van't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041098XHAmsterdamThe Netherlands
| | - Wolfgang Brenner
- Department of ChemistryUniversity of CambridgeLensfield RoadCB2 1EWCambridgeUK
| | - Jesús Mosquera
- Department of ChemistryUniversity of CambridgeLensfield RoadCB2 1EWCambridgeUK
| | - Kaj M. van Vliet
- Van't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041098XHAmsterdamThe Netherlands
| | | | - Joost N. H. Reek
- Van't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041098XHAmsterdamThe Netherlands
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43
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Rota Martir D, Zysman-Colman E. Photoactive supramolecular cages incorporating Ru(ii) and Ir(iii) metal complexes. Chem Commun (Camb) 2019; 55:139-158. [DOI: 10.1039/c8cc08327d] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Cage compounds incorporating phosphorescent Ru(ii) and Ir(iii) metal complexes possess a highly desirable set of optoelectronic and physical properties. This feature article summarizes the recent work on cage assemblies containing these metal complexes as photoactive units, highlighting our contribution to this growing field.
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Affiliation(s)
- Diego Rota Martir
- Organic Semiconductor Centre
- EaStCHEM School of Chemistry
- University of St Andrews
- St Andrews
- UK
| | - Eli Zysman-Colman
- Organic Semiconductor Centre
- EaStCHEM School of Chemistry
- University of St Andrews
- St Andrews
- UK
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44
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Mouarrawis V, Plessius R, van der Vlugt JI, Reek JNH. Confinement Effects in Catalysis Using Well-Defined Materials and Cages. Front Chem 2018; 6:623. [PMID: 30622940 PMCID: PMC6308152 DOI: 10.3389/fchem.2018.00623] [Citation(s) in RCA: 101] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Accepted: 11/30/2018] [Indexed: 11/28/2022] Open
Abstract
This review focuses on the effects that confinement of molecular and heterogeneous catalysts with well-defined structure has on the selectivity and activity of these systems. A general introduction about catalysis and how the working principles of enzymes can be used as a source of inspiration for the preparation of catalysts with enhanced performance is provided. Subsequently, relevant studies demonstrate the importance of second coordination sphere effects in a broad sense (in homogeneous and heterogeneous catalysis). Firstly, we discuss examples involving zeolites, MOFs and COFs as heterogeneous catalysts with well-defined structures where confinement influences catalytic performance. Then, specific cases of homogeneous catalysts where non-covalent interactions determine the selectivity and activity are treated in detail. This includes examples based on cyclodextrins, calix[n]arenes, cucurbit[n]urils, and self-assembled container molecules. Throughout the review, the impact of confined spaces is emphasized and put into context, in order to get a better understanding of the effects of confinement on catalyst performance. In addition, this analysis intends to showcase the similarities between homogeneous and heterogeneous catalysts, which may aid the development of novel strategies.
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Affiliation(s)
| | | | - Jarl Ivar van der Vlugt
- Homogeneous, Supramolecular and Bio-Inspired Catalysis (HomKat) Group, Van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Amsterdam, Netherlands
| | - Joost N. H. Reek
- Homogeneous, Supramolecular and Bio-Inspired Catalysis (HomKat) Group, Van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Amsterdam, Netherlands
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45
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Taylor LLK, Riddell IA, Smulders MMJ. Selbstorganisation von funktionellen diskreten dreidimensionalen Architekturen in Wasser. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201806297] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Lauren L. K. Taylor
- School of Chemistry; University of Manchester; Oxford Road M13 9PL Großbritannien
| | - Imogen A. Riddell
- School of Chemistry; University of Manchester; Oxford Road M13 9PL Großbritannien
| | - Maarten M. J. Smulders
- Laboratory of Organic Chemistry; Wageningen University, P.O. Box 8026; 6700EG Wageningen Niederlande
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46
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Taylor LLK, Riddell IA, Smulders MMJ. Self-Assembly of Functional Discrete Three-Dimensional Architectures in Water. Angew Chem Int Ed Engl 2018; 58:1280-1307. [DOI: 10.1002/anie.201806297] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Indexed: 01/01/2023]
Affiliation(s)
| | - Imogen A. Riddell
- School of Chemistry; University of Manchester; Oxford Road M13 9PL UK
| | - Maarten M. J. Smulders
- Laboratory of Organic Chemistry; Wageningen University, P.O. Box 8026; 6700EG Wageningen The Netherlands
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47
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Abstract
In order to fabricate efficient molecular photonic devices, it has been a long-held aspiration for chemists to understand and mimic natural light-harvesting complexes where a rapid and efficient transfer of excitation energy between chlorophyll pigments is observed. Synthetic porphyrins are attractive building blocks in this regard because of their rigid and planar geometry, high thermal and electronic stability, high molar extinction, small and tunable band gap, and tweakable optical as well as redox behavior. Owing to these fascinating properties, various types of porphyrin-based architectures have been reported utilizing both covalent and noncovalent approaches. However, it still remains a challenge to construct chemically robust, well-defined three-dimensional porphyrin cages which can be easily synthesized and yet suitable for useful applications both in solution as well as in solid state. Working on this idea, we recently synthesized box-shaped organic cages, which we called porphyrin boxes, by making use of dynamic covalent chemistry of imine condensation reaction between 4-connecting, square-shaped, tetraformylporphyrin and 3-connecting, triangular-shaped, triamine molecules. Various presynthetic, as well as postsynthetic modifications, can be carried out on porphyrin boxes including a variation of the alkyl chain length in their 3-connecting subunit, chemical functionalization, and metalation of the porphyrin core. This can remarkably tune their inherent properties, e.g., solubility, window size, volume, and polarity of the internal void. The porphyrin boxes can therefore be considered as a significant addition to the family of multiporphyrin-based architectures, and because of their chemical stability and shape persistency, the applications of porphyrin boxes expand beyond the photophysical properties of an artificial light-harvesting complex. Consequently, they have been exploited as porous organic cages, where their gas adsorption properties have been investigated. By incorporating them in a lipid bilayer membrane, an iodide selective synthetic ion channel has also been demonstrated. Further, we have explored electrocatalytic reduction of carbon dioxide using Fe(III) metalated porphyrin boxes. Additionally, the precise size and ease of metalation of porphyrin boxes allowed us to utilize them as premade building blocks for creating coordination-based hierarchical superstructures. Considering these developments, it may be worth combining the photophysical properties of porphyrin with the shape-persistent porous nature of porphyrin boxes to explore other novel applications. This Account summarizes our recent work on porphyrin boxes, starting with their design, structural features, and applications in different fields. We also try to provide scientific insight into the future opportunities that these amazing boxes have in store for exploring the still uncharted challenging domains in the field of supramolecular chemistry in a confined space.
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Affiliation(s)
- Rahul Dev Mukhopadhyay
- Center for Self-Assembly and Complexity (CSC), Institute for Basic Science (IBS), Pohang 37673, Republic of Korea
| | - Younghoon Kim
- Department of Chemistry, Pohang University of Science and Technology, Pohang 37673, Republic of Korea
| | - Jaehyoung Koo
- Department of Chemistry, Pohang University of Science and Technology, Pohang 37673, Republic of Korea
| | - Kimoon Kim
- Center for Self-Assembly and Complexity (CSC), Institute for Basic Science (IBS), Pohang 37673, Republic of Korea
- Department of Chemistry, Pohang University of Science and Technology, Pohang 37673, Republic of Korea
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48
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Tan C, Chu D, Tang X, Liu Y, Xuan W, Cui Y. Supramolecular Coordination Cages for Asymmetric Catalysis. Chemistry 2018; 25:662-672. [DOI: 10.1002/chem.201802817] [Citation(s) in RCA: 89] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2018] [Indexed: 01/24/2023]
Affiliation(s)
- Chunxia Tan
- School of Chemistry and Chemical Engineering and State Key Laboratory, of Metal, Matrix CompositesShanghai Jiao Tong University Shanghai 200240 P.R. China
| | - Dandan Chu
- School of Chemistry and Chemical Engineering and State Key Laboratory, of Metal, Matrix CompositesShanghai Jiao Tong University Shanghai 200240 P.R. China
| | - Xianhui Tang
- School of Chemistry and Chemical Engineering and State Key Laboratory, of Metal, Matrix CompositesShanghai Jiao Tong University Shanghai 200240 P.R. China
| | - Yan Liu
- School of Chemistry and Chemical Engineering and State Key Laboratory, of Metal, Matrix CompositesShanghai Jiao Tong University Shanghai 200240 P.R. China
| | - Weimin Xuan
- School of Chemistry and Chemical Engineering and State Key Laboratory, of Metal, Matrix CompositesShanghai Jiao Tong University Shanghai 200240 P.R. China
| | - Yong Cui
- School of Chemistry and Chemical Engineering and State Key Laboratory, of Metal, Matrix CompositesShanghai Jiao Tong University Shanghai 200240 P.R. China
- Collaborative Innovation Center of Chemical Science and Engineering Tianjin 300072 P.R. China
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49
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Torrent-Sucarrat M, Arrastia I, Arrieta A, Cossío FP. Stereoselectivity, Different Oxidation States, and Multiple Spin States in the Cyclopropanation of Olefins Catalyzed by Fe–Porphyrin Complexes. ACS Catal 2018. [DOI: 10.1021/acscatal.8b01492] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Miquel Torrent-Sucarrat
- Department of Organic Chemistry I, Universidad del País Vasco/Euskal Herriko Unibertsitatea (UPV/EHU), Centro de Innovación en Química Avanzada (ORFEO−CINQA), Manuel Lardizabal Ibilbidea 3, 20018 San Sebastián/Donostia, Spain
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4, 20018 San Sebastián/Donostia, Spain
- Ikerbasque, Basque Foundation for Science, Alameda Urquijo, 36-5 Plaza Bizkaia, 48011 Bilbao, Spain
| | - Iosune Arrastia
- Department of Organic Chemistry I, Universidad del País Vasco/Euskal Herriko Unibertsitatea (UPV/EHU), Centro de Innovación en Química Avanzada (ORFEO−CINQA), Manuel Lardizabal Ibilbidea 3, 20018 San Sebastián/Donostia, Spain
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4, 20018 San Sebastián/Donostia, Spain
| | - Ana Arrieta
- Department of Organic Chemistry I, Universidad del País Vasco/Euskal Herriko Unibertsitatea (UPV/EHU), Centro de Innovación en Química Avanzada (ORFEO−CINQA), Manuel Lardizabal Ibilbidea 3, 20018 San Sebastián/Donostia, Spain
| | - Fernando P. Cossío
- Department of Organic Chemistry I, Universidad del País Vasco/Euskal Herriko Unibertsitatea (UPV/EHU), Centro de Innovación en Química Avanzada (ORFEO−CINQA), Manuel Lardizabal Ibilbidea 3, 20018 San Sebastián/Donostia, Spain
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4, 20018 San Sebastián/Donostia, Spain
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50
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Luis ET, Iranmanesh H, Arachchige KSA, Donald WA, Quach G, Moore EG, Beves JE. Luminescent Tetrahedral Molecular Cages Containing Ruthenium(II) Chromophores. Inorg Chem 2018; 57:8476-8486. [PMID: 29969245 DOI: 10.1021/acs.inorgchem.8b01157] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
We have designed linear metalloligands which contain a central photoactive [Ru(N∧N)3]2+ unit bordered by peripheral metal binding sites. The combination of these metalloligands with Zn(II) and Fe(II) ions leads to heterometallic tetrahedral cages, which were studied by NMR spectroscopy, mass spectrometry, and photophysical methods. Like the parent metalloligands, the cages remain emissive in solution. This approach allows direct incorporation of the favorable properties of ruthenium(II) polypyridyl complexes into larger self-assembled structures.
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Affiliation(s)
- Ena T Luis
- School of Chemistry , UNSW Sydney , Sydney , 2052 Australia
| | | | | | | | - Gina Quach
- School of Chemistry and Molecular Biosciences, the University of Queensland , Brisbane , Queensland , 4072 Australia
| | - Evan G Moore
- School of Chemistry and Molecular Biosciences, the University of Queensland , Brisbane , Queensland , 4072 Australia
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