1
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Taylor AJ, Beer PD. Halogen bonding aza-BODIPYs for anion sensing and anion binding-modulated singlet oxygen generation. Chem Commun (Camb) 2024; 60:7983-7986. [PMID: 38920113 DOI: 10.1039/d4cc02330g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
Abstract
Two novel aza-BODIPY based anion sensors, decorated with halogen bonding recognition sites, are capable of detecting halide anions at biologically-relevant near-IR wavelengths. With potential application for improving the selectivity of photodynamic therapy agents, unprecedented supramolecular host-guest anion binding-modulated singlet oxygen generation is demonstrated.
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Affiliation(s)
- Andrew J Taylor
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford OX1 3TA, UK.
| | - Paul D Beer
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford OX1 3TA, UK.
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2
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Keuper AC, Fengler K, Ostler F, Danelzik T, Piekarski DG, García Mancheño O. Fine-Tuning Substrate-Catalyst Halogen-Halogen Interactions for Boosting Enantioselectivity in Halogen-Bonding Catalysis. Angew Chem Int Ed Engl 2023; 62:e202304781. [PMID: 37228095 DOI: 10.1002/anie.202304781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Revised: 05/08/2023] [Accepted: 05/25/2023] [Indexed: 05/27/2023]
Abstract
A new approach towards highly enantioselective halogen-bonding catalysis has been developed. To circumvent the intrinsic issues of the nature of the halogen-bond (XB) and the resultant unresolved limitations in asymmetric catalysis, fine-tuned halogen-halogen interactions between the substrate and XB-donor were designed to preorganize the substrate in the catalyst's cavity and boost enantiocontrol. The present strategy exploits both the electron cloud (Lewis base site) and the sigma (σ)-hole site of the halogen substituent of the substrates to form a tight catalyst-substrate-counteranion chiral complex, thus enabling a controlled induction of high levels of chirality transfer. Remarkable enantioselectivities of up to 95 : 5 e.r. (90 % ee) have been achieved in a model dearomatization reaction of halogen-substituted (iso)quinolines with tetrakis-iodotriazole multidentate anion-binding catalysts.
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Affiliation(s)
- Alica C Keuper
- Organic Chemistry Institute, University of Münster, Correnstraße 36/40, 48149, Münster, Germany
| | - Kevin Fengler
- Organic Chemistry Institute, University of Münster, Correnstraße 36/40, 48149, Münster, Germany
| | - Florian Ostler
- Organic Chemistry Institute, University of Münster, Correnstraße 36/40, 48149, Münster, Germany
| | - Tobias Danelzik
- Organic Chemistry Institute, University of Münster, Correnstraße 36/40, 48149, Münster, Germany
| | - Dariusz G Piekarski
- Institute of Physical Chemistry, Polish Academy of Sciences, 01-224, Warsaw, Poland
| | - Olga García Mancheño
- Organic Chemistry Institute, University of Münster, Correnstraße 36/40, 48149, Münster, Germany
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3
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Peluso P, Chankvetadze B. Recognition in the Domain of Molecular Chirality: From Noncovalent Interactions to Separation of Enantiomers. Chem Rev 2022; 122:13235-13400. [PMID: 35917234 DOI: 10.1021/acs.chemrev.1c00846] [Citation(s) in RCA: 57] [Impact Index Per Article: 28.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
It is not a coincidence that both chirality and noncovalent interactions are ubiquitous in nature and synthetic molecular systems. Noncovalent interactivity between chiral molecules underlies enantioselective recognition as a fundamental phenomenon regulating life and human activities. Thus, noncovalent interactions represent the narrative thread of a fascinating story which goes across several disciplines of medical, chemical, physical, biological, and other natural sciences. This review has been conceived with the awareness that a modern attitude toward molecular chirality and its consequences needs to be founded on multidisciplinary approaches to disclose the molecular basis of essential enantioselective phenomena in the domain of chemical, physical, and life sciences. With the primary aim of discussing this topic in an integrated way, a comprehensive pool of rational and systematic multidisciplinary information is provided, which concerns the fundamentals of chirality, a description of noncovalent interactions, and their implications in enantioselective processes occurring in different contexts. A specific focus is devoted to enantioselection in chromatography and electromigration techniques because of their unique feature as "multistep" processes. A second motivation for writing this review is to make a clear statement about the state of the art, the tools we have at our disposal, and what is still missing to fully understand the mechanisms underlying enantioselective recognition.
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Affiliation(s)
- Paola Peluso
- Istituto di Chimica Biomolecolare ICB, CNR, Sede secondaria di Sassari, Traversa La Crucca 3, Regione Baldinca, Li Punti, I-07100 Sassari, Italy
| | - Bezhan Chankvetadze
- Institute of Physical and Analytical Chemistry, School of Exact and Natural Sciences, Tbilisi State University, Chavchavadze Avenue 3, 0179 Tbilisi, Georgia
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4
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Peluso P, Mamane V. Stereoselective Processes Based on σ-Hole Interactions. Molecules 2022; 27:molecules27144625. [PMID: 35889497 PMCID: PMC9323542 DOI: 10.3390/molecules27144625] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 07/13/2022] [Accepted: 07/15/2022] [Indexed: 02/01/2023] Open
Abstract
The σ-hole interaction represents a noncovalent interaction between atoms with σ-hole(s) on their surface (such as halogens and chalcogens) and negative sites. Over the last decade, significant developments have emerged in applications where the σ-hole interaction was demonstrated to play a key role in the control over chirality. The aim of this review is to give a comprehensive overview of the current advancements in the use of σ-hole interactions in stereoselective processes, such as formation of chiral supramolecular assemblies, separation of enantiomers, enantioselective complexation and asymmetric catalysis.
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Affiliation(s)
- Paola Peluso
- Istituto di Chimica Biomolecolare ICB, CNR, Sede Secondaria di Sassari, Traversa La Crucca 3, Regione Baldinca, Li Punti, 07100 Sassari, Italy
- Correspondence: (P.P.); (V.M.)
| | - Victor Mamane
- Institut de Chimie de Strasbourg, UMR CNRS 7177, Equipe LASYROC, 1 Rue Blaise Pascal, 67008 Strasbourg, France
- Correspondence: (P.P.); (V.M.)
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5
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Kriis K, Martõnov H, Miller A, Erkman K, Järving I, Kaasik M, Kanger T. Multifunctional Catalysts in the Asymmetric Mannich Reaction of Malononitrile with N-Phosphinoylimines: Coactivation by Halogen Bonding versus Hydrogen Bonding. J Org Chem 2022; 87:7422-7435. [PMID: 35594434 DOI: 10.1021/acs.joc.2c00674] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A multifunctional (noncovalent) catalyst containing halogen-bond donor, hydrogen-bond donor, and Lewis basic sites was developed and applied in an enantioselective Mannich reaction between malononitrile and diphenylphosphinoyl-protected aldimine affording products in high yields (up to 98%) and moderate to high enantiomeric purities (ee up to 89%). Typically, noncovalent catalysts rely on several weak interactions to activate the substrate, with one or two of these giving the most notable contribution to activation. In this instance, instead of the initially proposed coactivation by halogen bonding, it was revealed that hydrogen bonding plays a key role in determining the enantioselectivity.
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Affiliation(s)
- Kadri Kriis
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
| | - Harry Martõnov
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
| | - Annette Miller
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
| | - Kristin Erkman
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
| | - Ivar Järving
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
| | - Mikk Kaasik
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
| | - Tõnis Kanger
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
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6
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Chiral Ferrocenyl–Iodotriazoles and –Iodotriazoliums as Halogen Bond Donors. Synthesis, Solid State Analysis and Catalytic Properties. Eur J Inorg Chem 2022. [DOI: 10.1002/ejic.202100927] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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7
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Tarannam N, Shukla R, Kozuch S. Yet another perspective on hole interactions. Phys Chem Chem Phys 2021; 23:19948-19963. [PMID: 34514473 DOI: 10.1039/d1cp03533a] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Hole interactions are known by different names depending on the key atom of the bond (halogen bond, chalcogen bond, hydrogen bond, etc.), and the geometry of the interaction (σ if in line, π if perpendicular to the Lewis acid plane). However, its origin starts with the creation of a Lewis acid by an underlying covalent bond, which forms an electrostatic depletion and a virtual antibonding orbital, which can create non-covalent interactions with Lewis bases. In this (maybe subjective) perspective, we will claim that hole interactions must be defined via the molecular orbital origin of the molecule. Under this premise we can better explore the richness of such bonding patterns. For that, we will study old, recent and new systems, trying to pinpoint some misinterpretations that are often associated with them. We will use as exemplars the triel bonds, a couple of metal complexes, a discussion on convergent σ-holes, and many cases of anti-electrostatic hole interactions.
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Affiliation(s)
- Naziha Tarannam
- Department of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 841051, Israel.
| | - Rahul Shukla
- Department of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 841051, Israel.
| | - Sebastian Kozuch
- Department of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 841051, Israel.
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8
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Ostler F, Piekarski DG, Danelzik T, Taylor MS, García Mancheño O. Neutral Chiral Tetrakis-Iodo-Triazole Halogen-Bond Donor for Chiral Recognition and Enantioselective Catalysis. Chemistry 2021; 27:2315-2320. [PMID: 33210767 PMCID: PMC7898328 DOI: 10.1002/chem.202005016] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Indexed: 12/18/2022]
Abstract
Halogen bonding represents a powerful tool in the field of noncovalent interactions. However, applications in enantioselective recognition and catalysis remain almost nonexistent, due in part to the distinct features of halogen bonds, including long covalent and noncovalent bond distances and high directionality. Herein, this work presents a novel chiral tetrakis-iodo-triazole structure as a neutral halogen bond donor for both chiral anion-recognition and enantioinduction in ion-pair organocatalysis. NMR-titration studies revealed significant differences in anion affinity between the halogen bonding receptor and its hydrogen bonding parent. Selective recognition of chiral dicarboxylates and asymmetric induction in a benchmark organocatalytic reaction were demonstrated using the halogen bond donor. Inversions in the absolute sense of chiral recognition, enantioselectivity, and chiroptical properties relative to the related hydrogen donor were observed. Computational modeling suggested that these effects were the result of distinct anion-binding modes for the halogen- versus hydrogen-bond donors.
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Affiliation(s)
- Florian Ostler
- Organic Chemistry InstituteUniversity of MünsterCorrensstraße 3648149MünsterGermany
| | - Dariusz G. Piekarski
- Organic Chemistry InstituteUniversity of MünsterCorrensstraße 3648149MünsterGermany
- Current affiliation: Institute of Physical ChemistryPolish Academy of SciencesKasprzaka 44/5201-224WarsawPoland
| | - Tobias Danelzik
- Organic Chemistry InstituteUniversity of MünsterCorrensstraße 3648149MünsterGermany
| | - Mark S. Taylor
- University of TorontoDepartment of Chemistry80 St. George StreetONM5S 3H6TorontoCanada
| | - Olga García Mancheño
- Organic Chemistry InstituteUniversity of MünsterCorrensstraße 3648149MünsterGermany
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9
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Gharpure SJ, Naveen S, Chavan RS, Padmaja. Regioselective Synthesis of Halotriazoles and their Utility in Metal Catalyzed Coupling Reactions. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000973] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Santosh J. Gharpure
- Department of Chemistry Indian Institute of Technology Bombay 400076 Powai Mumbai India
| | - Sudi Naveen
- Department of Chemistry Indian Institute of Technology Bombay 400076 Powai Mumbai India
| | - Rupali S. Chavan
- Department of Chemistry Indian Institute of Technology Bombay 400076 Powai Mumbai India
| | - Padmaja
- Department of Chemistry Indian Institute of Technology Bombay 400076 Powai Mumbai India
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10
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Zhang H, Toy PH. Halogen Bond‐Catalyzed Friedel−Crafts Reactions of Furans Using a 2,2’‐Bipyridine‐Based Catalyst. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202001019] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Huimiao Zhang
- Department of Chemistry The University of Hong Kong Pokfulam Road Hong Kong People's Republic of China
| | - Patrick H. Toy
- Department of Chemistry The University of Hong Kong Pokfulam Road Hong Kong People's Republic of China
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11
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Abstract
Halogen bond interactions, which take place between an electrophilic halogen
and the electron-pair of a Lewis base and exhibit high directionality (approximately 180°),
are non-covalent bond interactions similar to the hydrogen bond interaction. Many reports
on halogen bond interactions have been published thus far, but many of them discuss halogen
bond in the context of crystal engineering of supramolecular architecture. Since a
seminal report by Bolm in 2008, halogen bond-assisted or -promoted organic synthesis has
received significant attention. This review aims to introduce the molecular design of suitable
halogen bond donors and organic transformations involving halogen bond interactions
to afford a variety of organic compounds.
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Affiliation(s)
- Shigeyuki Yamada
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
| | - Tsutomu Konno
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
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12
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Wang L, Li Z, Liu J, Han J, Moriwaki H, Soloshonok VA. Recent Developments in the Asymmetric Detrifluoroacetylative Reactions of in situ Generated Mono-Fluorinated Enolates. CURR ORG CHEM 2020. [DOI: 10.2174/1385272824999200801022712] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The development of an efficient and mild synthetic methodology for the construction
of bioactive fluorine-containing molecules represents one of the hot research topics
in general synthetic organic chemistry. In this review, some recent progresses achieved
in the development of detrifluoroacetylatively generated mono-fluorinated enolates via CC
bond cleavage and their asymmetric nucleophilic reactions for assembly of chiral quaternary
C-F center containing compounds.
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Affiliation(s)
- Li Wang
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, Jiangsu, China
| | - Ziyi Li
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, Jiangsu, China
| | - Jiang Liu
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, Jiangsu, China
| | - Jianlin Han
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, Jiangsu, China
| | - Hiroki Moriwaki
- Hamari Chemical Ltd., 1-4-29 Kunijima, Higashi-Yodogawa-ku, Osaka 533-0024, Japan
| | - Vadim A. Soloshonok
- Department of Organic Chemistry I, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel Lardizabal 3, 20018 San Sebastian, Spain
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13
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Mamane V, Peluso P, Aubert E, Weiss R, Wenger E, Cossu S, Pale P. Disubstituted Ferrocenyl Iodo- and Chalcogenoalkynes as Chiral Halogen and Chalcogen Bond Donors. Organometallics 2020. [DOI: 10.1021/acs.organomet.0c00633] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Victor Mamane
- Institut de Chimie de Strasbourg, UMR CNRS 7177, Equipe LASYROC, 1 rue Blaise Pascal, 67008 Strasbourg Cedex, France
| | - Paola Peluso
- Istituto di Chimica Biomolecolare ICB, CNR, Sede secondaria di Sassari, Traversa La Crucca 3, Regione Baldinca, 07100 Li Punti, Sassari, Italy
| | - Emmanuel Aubert
- , Université de Lorraine, CNRS, CRM2, Bd des Aiguillettes, F-54000 Nancy, France
| | - Robin Weiss
- Institut de Chimie de Strasbourg, UMR CNRS 7177, Equipe LASYROC, 1 rue Blaise Pascal, 67008 Strasbourg Cedex, France
| | - Emmanuel Wenger
- , Université de Lorraine, CNRS, CRM2, Bd des Aiguillettes, F-54000 Nancy, France
| | - Sergio Cossu
- Dipartimento di Scienze Molecolari e Nanosistemi DSMN, Università Ca’ Foscari Venezia, Via Torino 155, 30172 Mestre Venezia, Italy
| | - Patrick Pale
- Institut de Chimie de Strasbourg, UMR CNRS 7177, Equipe LASYROC, 1 rue Blaise Pascal, 67008 Strasbourg Cedex, France
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14
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Kaasik M, Kanger T. Supramolecular Halogen Bonds in Asymmetric Catalysis. Front Chem 2020; 8:599064. [PMID: 33195108 PMCID: PMC7609521 DOI: 10.3389/fchem.2020.599064] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Accepted: 09/15/2020] [Indexed: 12/17/2022] Open
Abstract
Halogen bonding has received a significant increase in attention in the past 20 years. An important part of this interest has centered on catalytic applications of halogen bonding. Halogen bond (XB) catalysis is still a developing field in organocatalysis, although XB catalysis has outgrown its proof of concept phase. The start of this year witnessed the publication of the first example of a purely XB-based enantioselective catalytic reaction. While the selectivity can be improved upon, there are already plenty of examples in which halogen bonds, among other interactions, play a crucial role in the outcome of highly enantioselective reactions. This paper will give an overview of the current state of the use of XBs in catalytic stereoselective processes.
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Affiliation(s)
| | - Tõnis Kanger
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia
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15
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Affiliation(s)
- Martin Breugst
- Department für Chemie Universität zu Köln Greinstraße 4 50939 Köln Germany
| | - Jonas J. Koenig
- Department für Chemie Universität zu Köln Greinstraße 4 50939 Köln Germany
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16
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Holthoff JM, Engelage E, Weiss R, Huber SM. "Anti-Electrostatic" Halogen Bonding. Angew Chem Int Ed Engl 2020; 59:11150-11157. [PMID: 32227661 PMCID: PMC7317790 DOI: 10.1002/anie.202003083] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Revised: 03/30/2020] [Indexed: 01/03/2023]
Abstract
Halogen bonding is often described as being driven predominantly by electrostatics, and thus adducts between anionic halogen bond (XB) donors (halogen-based Lewis acids) and anions seem counterintuitive. Such "anti-electrostatic" XBs have been predicted theoretically but for organic XB donors, there are currently no experimental examples except for a few cases of self-association. Reported herein is the synthesis of two negatively charged organoiodine derivatives that form anti-electrostatic XBs with anions. Even though the electrostatic potential is universally negative across the surface of both compounds, DFT calculations indicate kinetic stabilization of their halide complexes in the gas phase and particularly in solution. Experimentally, self-association of the anionic XB donors was observed in solid-state structures, resulting in dimers, trimers, and infinite chains. In addition, co-crystals with halides were obtained, representing the first cases of halogen bonding between an organic anionic XB donor and a different anion. The bond lengths of all observed interactions are 14-21 % shorter than the sum of the van der Waals radii.
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Affiliation(s)
- Jana M. Holthoff
- Fakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstraße 15044801BochumGermany
| | - Elric Engelage
- Fakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstraße 15044801BochumGermany
| | - Robert Weiss
- Institut für Organische ChemieFriedrich-Alexander-Universität Erlangen-NürnbergHenkestraße 4291054ErlangenGermany
| | - Stefan M. Huber
- Fakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstraße 15044801BochumGermany
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17
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Danilkina NA, D'yachenko AS, Govdi AI, Khlebnikov AF, Kornyakov IV, Bräse S, Balova IA. Intramolecular Nicholas Reactions in the Synthesis of Heteroenediynes Fused to Indole, Triazole, and Isocoumarin. J Org Chem 2020; 85:9001-9014. [PMID: 32506914 DOI: 10.1021/acs.joc.0c00930] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
The applicability of an intramolecular Nicholas reaction for the preparation of 10-membered O- and N-enediynes fused to indole, 1,2,3-triazole, and isocoumarin was investigated. The general approach to acyclic enediyne precursors fused to heterocycles includes inter- and intramolecular buta-1,3-diyne cyclizations with the formation of iodoethynylheterocycles, followed by Sonogashira coupling. The nature of both a heterocycle and a nucleophilic group affects the possibility of a 10-membered ring closure by the Nicholas reaction. Among oxacycles, an isocoumarin-fused enediyne was obtained. In the case of O-enediyne annulated with indole, instead of the formation of a 10-membered cycle, BF3-promoted addition of an OH-group to the proximal triple bond at the C3 position afforded dihydrofuryl-substituted indole. For 1,2,3-triazole-fused analogues, using NH-Ts as a nucleophilic functional group allowed obtaining 10-membered azaenediyne, while the substrate with a hydroxyl group gave only traces of the desired 10-membered oxacycle. An improved method for the deprotection of Co-complexes of cyclic enediynes using tetrabutylammonium fluoride in an acetone/water mixture and the investigation of the 10-membered enediynes' reactivity in the Bergman cyclization are also reported. In the solid state, all synthesized iodoethynylheterocycles were found to be involved in halogen bond (XB) formation with either O or N atoms as XB acceptors.
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Affiliation(s)
- Natalia A Danilkina
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - Alexander S D'yachenko
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - Anastasia I Govdi
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - Alexander F Khlebnikov
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - Ilya V Kornyakov
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
| | - Stefan Bräse
- Institute of Organic Chemistry (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany.,Institute of Biological and Chemical Systems-Functional Molecular Systems (IBCS-FMS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Irina A Balova
- Institute of Chemistry, Saint Petersburg State University (SPbU), Universitetskaya nab. 7/9, 199034 Saint Petersburg, Russia
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18
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Rani J, Grover V, Dhamija S, Titi HM, Patra R. Computational insight into the halogen bonded self-assembly of hexa-coordinated metalloporphyrins. Phys Chem Chem Phys 2020; 22:11558-11566. [PMID: 32395736 DOI: 10.1039/d0cp00351d] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
We demonstrate herein a computational study probing the influence of metalloporphyrins on intermolecular halogen bonding (XB) during supramolecular self-assembly. The results demonstrate that porphyrin aromatic rings can activate or deactivate halogen bonding interactions, especially those on axial ligands, and further influence the preference type of halogen···halogen bonding during the supramolecular self-assembly. Calculations show that the halogen atom present at the equatorial position has a higher sigma hole potential (VS,max) than that at the axial position. The computational analysis and our observations from the X-ray structure analysis are in good agreement. From structural analysis it is clear that equatorial halogen atoms prefer to participate in Type-II XB interactions whereas the axial halogen atoms either participate in Type-I XB interaction or reluctant to participate in XB interactions due to the decrease of their sigma hole potential. Thus, we demonstrate, herein, for the first time a computational study probing the direct influence of the porphyrin's ring current on the sigma hole potential (VS,max) of the halogen atoms and subsequently the effects of the supramolecular self-assembly.
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Affiliation(s)
- Jyoti Rani
- Department of Chemistry and Centre for Advanced Studies in Chemistry, Panjab University, Chandigarh, India
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19
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A decade of advances in the reaction of nitrogen sources and alkynes for the synthesis of triazoles. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2020.213217] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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20
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Holthoff JM, Engelage E, Weiss R, Huber SM. “Anti‐elektrostatische” Halogenbrücken. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202003083] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Jana M. Holthoff
- Fakultät für Chemie und BiochemieRuhr-Universität Bochum Universitätsstraße 150 44801 Bochum Deutschland
| | - Elric Engelage
- Fakultät für Chemie und BiochemieRuhr-Universität Bochum Universitätsstraße 150 44801 Bochum Deutschland
| | - Robert Weiss
- Institut für Organische ChemieFriedrich-Alexander-Universität Erlangen-Nürnberg Henkestraße 42 91054 Erlangen Deutschland
| | - Stefan M. Huber
- Fakultät für Chemie und BiochemieRuhr-Universität Bochum Universitätsstraße 150 44801 Bochum Deutschland
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21
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Sutar RL, Engelage E, Stoll R, Huber SM. Bidentate Chiral Bis(imidazolium)-Based Halogen-Bond Donors: Synthesis and Applications in Enantioselective Recognition and Catalysis. Angew Chem Int Ed Engl 2020; 59:6806-6810. [PMID: 32045504 PMCID: PMC7187470 DOI: 10.1002/anie.201915931] [Citation(s) in RCA: 62] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2019] [Indexed: 01/13/2023]
Abstract
Even though halogen bonding-the noncovalent interaction between electrophilic halogen substituents and Lewis bases-has now been established in molecular recognition and catalysis, its use in enantioselective processes is still very rarely explored. Herein, we present the synthesis of chiral bidentate halogen-bond donors based on two iodoimidazolium units with rigidly attached chiral sidearms. With these Lewis acids, chiral recognition of a racemic diamine is achieved in NMR studies. DFT calculations support a 1:1 interaction of the halogen-bond donor with both enantiomers and indicate that the chiral recognition is based on a different spatial orientation of the Lewis bases in the halogen-bonded complexes. In addition, moderate enantioselectivity is achieved in a Mukaiyama aldol reaction with a preorganized variant of the chiral halogen-bond donor. This represents the first case in which asymmetric induction was realized with a pure halogen-bond donor lacking any additional active functional groups.
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Affiliation(s)
- Revannath L. Sutar
- Fakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstrasse 15044801BochumGermany
| | - Elric Engelage
- Fakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstrasse 15044801BochumGermany
| | - Raphael Stoll
- Fakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstrasse 15044801BochumGermany
| | - Stefan M. Huber
- Fakultät für Chemie und BiochemieRuhr-Universität BochumUniversitätsstrasse 15044801BochumGermany
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22
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Sutar RL, Engelage E, Stoll R, Huber SM. Zweizähnige chirale Bis(imidazolium)‐basierte Halogenbrückendonoren: Synthese und Anwendungen in enantioselektiver Erkennung und Katalyse. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201915931] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Revannath L. Sutar
- Fakultät für Chemie und BiochemieRuhr-Universität Bochum Universitätsstraße 150 44801 Bochum Deutschland
| | - Elric Engelage
- Fakultät für Chemie und BiochemieRuhr-Universität Bochum Universitätsstraße 150 44801 Bochum Deutschland
| | - Raphael Stoll
- Fakultät für Chemie und BiochemieRuhr-Universität Bochum Universitätsstraße 150 44801 Bochum Deutschland
| | - Stefan M. Huber
- Fakultät für Chemie und BiochemieRuhr-Universität Bochum Universitätsstraße 150 44801 Bochum Deutschland
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23
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von der Heiden D, Vanderkooy A, Erdélyi M. Halogen bonding in solution: NMR spectroscopic approaches. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2019.213147] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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24
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Xu X, Huang S, Zhang Z, Cao L, Yan X. Halogen-bonding-induced diverse aggregation of 4,5-diiodo-1,2,3-triazolium salts with different anions. Beilstein J Org Chem 2020; 16:78-87. [PMID: 32082427 PMCID: PMC7006493 DOI: 10.3762/bjoc.16.10] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2019] [Accepted: 12/27/2019] [Indexed: 12/24/2022] Open
Abstract
The synthesis of 4,5-diiodo-1,3-dimesityl-1,2,3-triazolium salts with different anions have been developed. These triazolium salts show diverse aggregation via halogen bonding between C-I bonds and anions. Triazolium with halide anions exists as a tetramer with saddle conformation. Triazolium tetrafluoroborate exists as a trimer with Chinese lantern shape conformation. Triazolium trifluoroacetate and acetate exist as dimers, respectively, while the former shows boat conformation and the latter forms rectangle conformation. Triazolium salts form a linear polymer with polyiodide.
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Affiliation(s)
- Xingyu Xu
- Department of Chemistry, Renmin University of China, Beijing 100872, People’s Republic of China
| | - Shiqing Huang
- Department of Chemistry, Renmin University of China, Beijing 100872, People’s Republic of China
| | - Zengyu Zhang
- Department of Chemistry, Renmin University of China, Beijing 100872, People’s Republic of China
| | - Lei Cao
- Department of Chemistry, Renmin University of China, Beijing 100872, People’s Republic of China
| | - Xiaoyu Yan
- Department of Chemistry, Renmin University of China, Beijing 100872, People’s Republic of China
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25
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Bamberger J, Ostler F, Mancheño OG. Frontiers in Halogen and Chalcogen-Bond Donor Organocatalysis. ChemCatChem 2019; 11:5198-5211. [PMID: 31894187 PMCID: PMC6919929 DOI: 10.1002/cctc.201901215] [Citation(s) in RCA: 124] [Impact Index Per Article: 24.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Indexed: 01/01/2023]
Abstract
Non-covalent molecular interactions on the basis of halogen and chalcogen bonding represent a promising, powerful catalytic activation mode. However, these "unusual" non-covalent interactions are typically employed in the solid state and scarcely exploited in catalysis. In recent years, an increased interest in halogen and chalcogen bonding has been awaken, as they provide profound characteristics that make them an appealing alternative to the well-explored hydrogen bonding. Being particularly relevant in the binding of "soft" substrates, the similar strength to hydrogen bonding interactions and its higher directionality allows for solution-phase applications with halogen and chalcogen bonding as the key interaction. In this mini-review, the special features, state-of-the-art and key examples of these so-called σ-hole interactions in the field of organocatalysis are presented.
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Affiliation(s)
- Julia Bamberger
- Organic Chemistry InstituteMünster UniversityCorrensstraße 40MünsterD-48149Germany
| | - Florian Ostler
- Organic Chemistry InstituteMünster UniversityCorrensstraße 40MünsterD-48149Germany
| | - Olga García Mancheño
- Organic Chemistry InstituteMünster UniversityCorrensstraße 40MünsterD-48149Germany
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26
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Affiliation(s)
- Revannath L. Sutar
- Fakultät für Chemie und Biochemie, Ruhr-Universität Bochum, Universitätsstraße 150, Bochum, 44801, Germany
| | - Stefan M. Huber
- Fakultät für Chemie und Biochemie, Ruhr-Universität Bochum, Universitätsstraße 150, Bochum, 44801, Germany
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27
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Ge Y, Yang H, Heusler A, Chua Z, Wong MW, Tan C. Halogen‐Bonding‐Induced Conjugate Addition of Thiophenes to Enones and Enals. Chem Asian J 2019; 14:2656-2661. [DOI: 10.1002/asia.201900607] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2019] [Revised: 05/26/2019] [Indexed: 12/23/2022]
Affiliation(s)
- Yi‐Cen Ge
- Division of Chemistry and Biological ChemistrySchool of Physical and Mathematical SciencesNanyang Technological University 21 Nanyang Link Singapore 637371 Singapore
| | - Hui Yang
- Department of ChemistryNational University of Singapore Singapore 117543 Singapore
| | - Arne Heusler
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität Münster Corrensstraße 40 48149 Münster Germany
| | - Zhijie Chua
- Division of Chemistry and Biological ChemistrySchool of Physical and Mathematical SciencesNanyang Technological University 21 Nanyang Link Singapore 637371 Singapore
| | - Ming Wah Wong
- Department of ChemistryNational University of Singapore Singapore 117543 Singapore
| | - Choon‐Hong Tan
- Division of Chemistry and Biological ChemistrySchool of Physical and Mathematical SciencesNanyang Technological University 21 Nanyang Link Singapore 637371 Singapore
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28
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Peterson A, Kaasik M, Metsala A, Järving I, Adamson J, Kanger T. Tunable chiral triazole-based halogen bond donors: assessment of donor strength in solution with nitrogen-containing acceptors. RSC Adv 2019; 9:11718-11721. [PMID: 35517004 PMCID: PMC9063393 DOI: 10.1039/c9ra01692a] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Accepted: 04/04/2019] [Indexed: 12/15/2022] Open
Abstract
Strong halogen bond (XB) donors are needed for the activation of neutral substrates. We demonstrate that XB donor properties of iodo-triazoles can be significantly enhanced by quaternization in combination with varying the counterion and aromatic substituent, exemplified by association constants with quinuclidine as high as 1.1 × 104 M-1.
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Affiliation(s)
- Anna Peterson
- Chemical Physics Laboratory, National Institute of Chemical Physics and Biophysics Akadeemia tee 23 12618 Tallinn Estonia
- Department of Chemistry and Biotechnology, School of Science, Tallinn University of Technology Akadeemia tee 15 12618 Tallinn Estonia
| | - Mikk Kaasik
- Department of Chemistry and Biotechnology, School of Science, Tallinn University of Technology Akadeemia tee 15 12618 Tallinn Estonia
| | - Andrus Metsala
- Department of Chemistry and Biotechnology, School of Science, Tallinn University of Technology Akadeemia tee 15 12618 Tallinn Estonia
| | - Ivar Järving
- Department of Chemistry and Biotechnology, School of Science, Tallinn University of Technology Akadeemia tee 15 12618 Tallinn Estonia
| | - Jasper Adamson
- Chemical Physics Laboratory, National Institute of Chemical Physics and Biophysics Akadeemia tee 23 12618 Tallinn Estonia
| | - Tõnis Kanger
- Department of Chemistry and Biotechnology, School of Science, Tallinn University of Technology Akadeemia tee 15 12618 Tallinn Estonia
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29
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Kaasik M, Metsala A, Kaabel S, Kriis K, Järving I, Kanger T. Halo-1,2,3-triazolium Salts as Halogen Bond Donors for the Activation of Imines in Dihydropyridinone Synthesis. J Org Chem 2019; 84:4294-4303. [DOI: 10.1021/acs.joc.9b00248] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Mikk Kaasik
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn 12618, Estonia
| | - Andrus Metsala
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn 12618, Estonia
| | - Sandra Kaabel
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn 12618, Estonia
| | - Kadri Kriis
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn 12618, Estonia
| | - Ivar Järving
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn 12618, Estonia
| | - Tõnis Kanger
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn 12618, Estonia
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30
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Govdi AI, Danilkina NA, Ponomarev AV, Balova IA. 1-Iodobuta-1,3-diynes in Copper-Catalyzed Azide-Alkyne Cycloaddition: A One-Step Route to 4-Ethynyl-5-iodo-1,2,3-triazoles. J Org Chem 2019; 84:1925-1940. [PMID: 30632741 DOI: 10.1021/acs.joc.8b02916] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Cu-catalyzed 1,3-dipolar cycloaddition of iododiacetylenes with organic azides using iodotris(triphenylphosphine)copper(I) as a catalyst was found to be an efficient one-step synthetic route to 5-iodo-4-ethynyltriazoles. The reaction is tolerant to various functional groups in both butadiyne and azide moieties. The synthetic application of 5-iodo-4-ethynyl triazoles obtained was also evaluated: the Sonogashira coupling with alkynes resulted in unsymmetrically substituted triazole-fused enediyne systems, while the Suzuki reaction yielded the corresponding 5-aryl-4-ethynyl triazoles.
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Affiliation(s)
- Anastasia I Govdi
- Institute of Chemistry , Saint Petersburg State University (SPbU) , Universitetskaya nab. 7/9 , Saint Petersburg 199034 , Russia
| | - Natalia A Danilkina
- Institute of Chemistry , Saint Petersburg State University (SPbU) , Universitetskaya nab. 7/9 , Saint Petersburg 199034 , Russia
| | - Alexander V Ponomarev
- Institute of Chemistry , Saint Petersburg State University (SPbU) , Universitetskaya nab. 7/9 , Saint Petersburg 199034 , Russia
| | - Irina A Balova
- Institute of Chemistry , Saint Petersburg State University (SPbU) , Universitetskaya nab. 7/9 , Saint Petersburg 199034 , Russia
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31
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Arai T, Horigane K, Watanabe O, Kakino J, Sugiyama N, Makino H, Kamei Y, Yabe S, Yamanaka M. Association of Halogen Bonding and Hydrogen Bonding in Metal Acetate-Catalyzed Asymmetric Halolactonization. iScience 2019; 12:280-292. [PMID: 30731356 PMCID: PMC6365408 DOI: 10.1016/j.isci.2019.01.029] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Revised: 12/26/2018] [Accepted: 01/18/2019] [Indexed: 12/24/2022] Open
Abstract
Cooperative activation using halogen bonding and hydrogen bonding works in metal-catalyzed asymmetric halolactonization. The Zn3(OAc)4-3,3'-bis(aminoimino)binaphthoxide (tri-Zn) complex catalyzes both asymmetric iodolactonization and bromolactonization. Carboxylic acid substrates are converted to zinc carboxylates on the tri-Zn complex, and the N-halosuccinimide (N-bromosuccinimide [NBS] or N-iodosuccinimide [NIS]) is activated by hydrogen bonding with the diamine unit of chiral ligand. Halolactonization is significantly enhanced by the addition of catalytic I2. Density functional theory calculations revealed that a catalytic amount of I2 mediates the alkene portion of the substrates and NIS to realize highly enantioselective iodolactonization. The tri-Zn catalyst activates both sides of the carboxylic acid and alkene moiety, so that asymmetric five-membered iodolactonization of prochiral diallyl acetic acids proceeded to afford the chiral γ-butyrolactones. In the total description of the catalytic cycle, iodolactonization using the NIS-I2 complex proceeds with the regeneration of I2, which enables the catalytic use of I2. The actual iodination reagent is I2 and not NIS.
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Affiliation(s)
- Takayoshi Arai
- Department of Chemistry, Graduate School of Science, Chiba University, 1-33 Yayoi, Inage, Chiba 263-8522, Japan; Soft Molecular Activation Research Center (SMARC), Chiba University, 1-33 Yayoi, Inage, Chiba 263-8522, Japan; Chiba Iodine Research Innovation Center (CIRIC), 1-33 Yayoi, Inage, Chiba 263-8522, Japan.
| | - Kodai Horigane
- Department of Chemistry, Graduate School of Science, Chiba University, 1-33 Yayoi, Inage, Chiba 263-8522, Japan
| | - Ohji Watanabe
- Department of Chemistry, Graduate School of Science, Chiba University, 1-33 Yayoi, Inage, Chiba 263-8522, Japan
| | - Junki Kakino
- Department of Chemistry, Graduate School of Science, Chiba University, 1-33 Yayoi, Inage, Chiba 263-8522, Japan
| | - Noriyuki Sugiyama
- Department of Chemistry, Graduate School of Science, Chiba University, 1-33 Yayoi, Inage, Chiba 263-8522, Japan
| | - Hiroki Makino
- Department of Chemistry, Graduate School of Science, Chiba University, 1-33 Yayoi, Inage, Chiba 263-8522, Japan
| | - Yuto Kamei
- Department of Chemistry, Rikkyo University, 3-34-1 Nishi-Ikebukuro, Toshima-ku, Tokyo 171-8588, Japan
| | - Shinnosuke Yabe
- Department of Chemistry, Rikkyo University, 3-34-1 Nishi-Ikebukuro, Toshima-ku, Tokyo 171-8588, Japan
| | - Masahiro Yamanaka
- Department of Chemistry, Rikkyo University, 3-34-1 Nishi-Ikebukuro, Toshima-ku, Tokyo 171-8588, Japan; Research Center for Smart Molecules, Rikkyo University, 3-34-1 Nishi-Ikebukuro, Toshima-ku, Tokyo 171-8588, Japan.
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32
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Alfuth J, Chojnacki J, Połoński T, Olszewska T. Induction of chirality in 4,4′-azopyridine by halogen-bonding interaction with optically active ditopic donors. NEW J CHEM 2019. [DOI: 10.1039/c8nj05750h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Co-crystallization of 4,4′-azopyridine with optically active halogen-bonding donors results in induction of chirality in this molecule.
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Affiliation(s)
- Jan Alfuth
- Department of Organic Chemistry
- Gdańsk University of Technology
- 80-233 Gdańsk
- Poland
| | - Jarosław Chojnacki
- Department of Inorganic Chemistry
- Gdańsk University of Technology
- 80-233 Gdańsk
- Poland
| | - Tadeusz Połoński
- Department of Organic Chemistry
- Gdańsk University of Technology
- 80-233 Gdańsk
- Poland
| | - Teresa Olszewska
- Department of Organic Chemistry
- Gdańsk University of Technology
- 80-233 Gdańsk
- Poland
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33
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Popa MM, Man IC, Draghici C, Shova S, Caira MR, Dumitrascu F, Dumitrescu D. Halogen bonding in 5-iodo-1-arylpyrazoles investigated in the solid state and predicted by solution13C-NMR spectroscopy. CrystEngComm 2019. [DOI: 10.1039/c9ce01263j] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Halogen bonding as important directional forces in the supramolecular structure of iodinated 1-arylpyrazoles.
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Affiliation(s)
- Marcel Mirel Popa
- “C.D. Nenitzescu” Center for Organic Chemistry
- Romanian Academy
- Bucharest
- Romania
| | | | - Constantin Draghici
- “C.D. Nenitzescu” Center for Organic Chemistry
- Romanian Academy
- Bucharest
- Romania
| | - Sergiu Shova
- “Petru Poni” Institute of Macromolecular Chemistry
- Department of Inorganic Polymers
- Romanian Academy
- Romania
| | - Mino R. Caira
- Department of Chemistry
- University of Cape Town
- Rondebosch 7701
- South Africa
| | - Florea Dumitrascu
- “C.D. Nenitzescu” Center for Organic Chemistry
- Romanian Academy
- Bucharest
- Romania
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34
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Kazi I, Sekar G. An efficient synthesis of benzothiazole using tetrabromomethane as a halogen bond donor catalyst. Org Biomol Chem 2019; 17:9743-9756. [DOI: 10.1039/c9ob02125f] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
A CBr4 catalyzed simple, mild, and efficient protocol has been developed for the synthesis of 2-substituted benzothiazole from 2-aminothiophenols and N-methylthioamides under solvent free conditions.
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Affiliation(s)
- Imran Kazi
- Department of Chemistry
- Indian Institute of Technology Madras
- Chennai
- India
| | - Govindasamy Sekar
- Department of Chemistry
- Indian Institute of Technology Madras
- Chennai
- India
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35
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Chung R, Vo A, Fokin VV, Hein JE. Catalyst Activation, Chemoselectivity, and Reaction Rate Controlled by the Counterion in the Cu(I)-Catalyzed Cycloaddition between Azide and Terminal or 1-Iodoalkynes. ACS Catal 2018. [DOI: 10.1021/acscatal.8b01342] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Ryan Chung
- Department of Chemistry, The University of British Columbia, Vancouver, British Columbia V6T 1Z1, Canada
| | - Anh Vo
- Department of Chemistry and Chemical Biology, University of California, Merced, Merced, California 95343, United States
| | - Valery V. Fokin
- Department of Chemistry, University of Southern California, Los Angeles, California 90089, United States
| | - Jason E. Hein
- Department of Chemistry, The University of British Columbia, Vancouver, British Columbia V6T 1Z1, Canada
- Department of Chemistry and Chemical Biology, University of California, Merced, Merced, California 95343, United States
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36
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Tepper R, Schubert US. Halogenbrücken in Lösung: Anionenerkennung, Templat‐gestützte Selbstorganisation und Organokatalyse. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201707986] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Ronny Tepper
- Institut für Organische Chemie und Makromolekulare Chemie (IOMC) Friedrich-Schiller-Universität Jena Humboldtstraße 10 07743 Jena Deutschland
- Jena Center for Soft Matter (JCSM) Friedrich-Schiller-Universität Jena Philosophenweg 7 07743 Jena Deutschland
| | - Ulrich S. Schubert
- Institut für Organische Chemie und Makromolekulare Chemie (IOMC) Friedrich-Schiller-Universität Jena Humboldtstraße 10 07743 Jena Deutschland
- Jena Center for Soft Matter (JCSM) Friedrich-Schiller-Universität Jena Philosophenweg 7 07743 Jena Deutschland
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37
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Tepper R, Schubert US. Halogen Bonding in Solution: Anion Recognition, Templated Self-Assembly, and Organocatalysis. Angew Chem Int Ed Engl 2018; 57:6004-6016. [PMID: 29341377 DOI: 10.1002/anie.201707986] [Citation(s) in RCA: 181] [Impact Index Per Article: 30.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Revised: 12/14/2017] [Indexed: 12/21/2022]
Abstract
The halogen bond is a supramolecular interaction between a Lewis-acidic region of a covalently bound halogen and a Lewis base. It has been studied widely in silico and experimentally in the solid state; however, solution-phase applications have attracted enormous interest in the last few years. This Minireview highlights selected recent developments in halogen bond interactions in solution, with a focus on the use of receptors based on halogen bonds in anion recognition and sensing, anion-templated self-assembly, as well as in organocatalysis.
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Affiliation(s)
- Ronny Tepper
- Laboratory of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstrasse 10, 07743, Jena, Germany.,Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743, Jena, Germany
| | - Ulrich S Schubert
- Laboratory of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstrasse 10, 07743, Jena, Germany.,Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743, Jena, Germany
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38
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Kobayashi Y, Nakatsuji Y, Li S, Tsuzuki S, Takemoto Y. Direct N
-Glycofunctionalization of Amides with Glycosyl Trichloroacetimidate by Thiourea/Halogen Bond Donor Co-Catalysis. Angew Chem Int Ed Engl 2018; 57:3646-3650. [DOI: 10.1002/anie.201712726] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Revised: 01/16/2018] [Indexed: 12/23/2022]
Affiliation(s)
- Yusuke Kobayashi
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Yuya Nakatsuji
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Shanji Li
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Seiji Tsuzuki
- Research Initiative of Computational Sciences (RICS); Nanosystem Research Institute (NRI); National Institute of Advanced Industrial Science and Technology (AIST); 1-1-1 Umezono Tsukuba Ibaraki 305-8568 Japan
| | - Yoshiji Takemoto
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
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39
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Kobayashi Y, Nakatsuji Y, Li S, Tsuzuki S, Takemoto Y. Direct N
-Glycofunctionalization of Amides with Glycosyl Trichloroacetimidate by Thiourea/Halogen Bond Donor Co-Catalysis. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712726] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Yusuke Kobayashi
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Yuya Nakatsuji
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Shanji Li
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Seiji Tsuzuki
- Research Initiative of Computational Sciences (RICS); Nanosystem Research Institute (NRI); National Institute of Advanced Industrial Science and Technology (AIST); 1-1-1 Umezono Tsukuba Ibaraki 305-8568 Japan
| | - Yoshiji Takemoto
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
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40
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Peluso P, Mamane V, Dallocchio R, Dessì A, Villano R, Sanna D, Aubert E, Pale P, Cossu S. Polysaccharide-based chiral stationary phases as halogen bond acceptors: A novel strategy for detection of stereoselective σ-hole bonds in solution. J Sep Sci 2018; 41:1247-1256. [PMID: 29239526 DOI: 10.1002/jssc.201701206] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2017] [Revised: 12/01/2017] [Accepted: 12/02/2017] [Indexed: 12/15/2022]
Abstract
In the last few years, halogen bonds have been exploited in a variety of research areas both in the solid state and in solution. Nevertheless, several factors make formation and detection of halogen bonds in solution challenging. Moreover, to date, few chiral molecules containing electrophilic halogens as recognition sites have been reported. Recently, we described the first series of halogen-bond-driven enantioseparations performed on cellulose tris(3,5-dimethylphenylcarbamate) by high-performance liquid chromatography. Herein the performances of amylose tris(3,5-dimethylphenylcarbamate) as halogen bond acceptor were also investigated and compared with respect to cellulose tris(3,5-dimethylphenylcarbamate). With the aim to explore the effect of polysaccharide backbone on the enantioseparations, the thermodynamic parameters governing the halogen-dependent enantioseparations on both cellulose and amylose polymers were determined by a study at variable temperature and compared. Molecular dynamics were performed to model the halogen bond in polysaccharide-analyte complexes. Chiral halogenated 4,4'-bipyridines were used as test compounds (halogen bond donors). On this basis, a practical method for detection of stereoselective halogen bonds in solution was developed, which is based on the unprecedented use of high-performance liquid chromatography as technical tool with polysaccharide polymers as molecular probes (halogen bond acceptors). The analytical strategy showed higher sensitivity for the detection of weak halogen bonds.
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Affiliation(s)
- Paola Peluso
- Istituto di Chimica Biomolecolare ICB CNR - Sede secondaria di Sassari, Sassari, Italy
| | - Victor Mamane
- Institut de Chimie de Strasbourg, UMR 7177, Equipe LASYROC, Strasbourg, France
| | - Roberto Dallocchio
- Istituto di Chimica Biomolecolare ICB CNR - Sede secondaria di Sassari, Sassari, Italy
| | - Alessandro Dessì
- Istituto di Chimica Biomolecolare ICB CNR - Sede secondaria di Sassari, Sassari, Italy
| | - Rosaria Villano
- Istituto di Chimica Biomolecolare ICB CNR - Sede secondaria di Sassari, Sassari, Italy
| | - Daniele Sanna
- Istituto di Chimica Biomolecolare ICB CNR - Sede secondaria di Sassari, Sassari, Italy
| | - Emmanuel Aubert
- CRM2, UMR CNRS 7036, Université de Lorraine, Vandoeuvre-les-Nancy, France
| | - Patrick Pale
- Institut de Chimie de Strasbourg, UMR 7177, Equipe LASYROC, Strasbourg, France
| | - Sergio Cossu
- Dipartimento di Scienze Molecolari e Nanosistemi, Università Ca' Foscari di Venezia, Mestre Venezia, Italy
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41
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Kuwano S, Suzuki T, Hosaka Y, Arai T. A chiral organic base catalyst with halogen-bonding-donor functionality: asymmetric Mannich reactions of malononitrile with N-Boc aldimines and ketimines. Chem Commun (Camb) 2018; 54:3847-3850. [DOI: 10.1039/c8cc00865e] [Citation(s) in RCA: 57] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Asymmetric Mannich reactions of malononitrile with various N-Boc imines were developed using a chiral organic base catalyst with halogen-bonding-donor functionality.
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Affiliation(s)
- Satoru Kuwano
- Soft Molecular Activation Research Center (SMARC)
- Chiba Iodine Resource Innovation Center (CIRIC)
- Molecular Chirality Research Center (MCRC), and Department of Chemistry
- Graduate School of Science
- Chiba University
| | - Takumi Suzuki
- Soft Molecular Activation Research Center (SMARC)
- Chiba Iodine Resource Innovation Center (CIRIC)
- Molecular Chirality Research Center (MCRC), and Department of Chemistry
- Graduate School of Science
- Chiba University
| | - Yusei Hosaka
- Soft Molecular Activation Research Center (SMARC)
- Chiba Iodine Resource Innovation Center (CIRIC)
- Molecular Chirality Research Center (MCRC), and Department of Chemistry
- Graduate School of Science
- Chiba University
| | - Takayoshi Arai
- Soft Molecular Activation Research Center (SMARC)
- Chiba Iodine Resource Innovation Center (CIRIC)
- Molecular Chirality Research Center (MCRC), and Department of Chemistry
- Graduate School of Science
- Chiba University
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42
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Terada S, Hirai M, Honzawa A, Kitagawa O, Kamizela A, Wzorek A, Soloshonok VA. Possible Case of Halogen Bond-Driven Self-Disproportionation of Enantiomers (SDE) via Achiral Chromatography. Chemistry 2017; 23:14631-14638. [PMID: 28783208 DOI: 10.1002/chem.201703308] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2017] [Indexed: 11/12/2022]
Abstract
The major breakthrough reported in this work is the discovery of likely halogen bond-driven self-disproportionation of enantiomers (SDE). Taking into account that the halogen-bonding interactions can be rationally designed and can match, or even exceed, the strength of the more familiar hydrogen bond, this discovery clearly opens an unexpected new direction of research in the areas of molecular chirality and the SDE phenomenon.
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Affiliation(s)
- Shumpei Terada
- Department of Applied Chemistry, Shibaura Institute of Technology, 3-7-5 Toyosu, Kohto-ku, Tokyo, 135-8548, Japan
| | - Motohiro Hirai
- Department of Applied Chemistry, Shibaura Institute of Technology, 3-7-5 Toyosu, Kohto-ku, Tokyo, 135-8548, Japan
| | - Ayaka Honzawa
- Department of Applied Chemistry, Shibaura Institute of Technology, 3-7-5 Toyosu, Kohto-ku, Tokyo, 135-8548, Japan
| | - Osamu Kitagawa
- Department of Applied Chemistry, Shibaura Institute of Technology, 3-7-5 Toyosu, Kohto-ku, Tokyo, 135-8548, Japan
| | - Angelika Kamizela
- Institute of Chemistry, Jan Kochanowski University in Kielce, Świętokrzyska 15G, 25-406, Kielce, Poland
| | - Alicja Wzorek
- Institute of Chemistry, Jan Kochanowski University in Kielce, Świętokrzyska 15G, 25-406, Kielce, Poland.,Department of Organic Chemistry I, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel Lardizábal 3, 20018, San Sebastián, Spain
| | - Vadim A Soloshonok
- Department of Organic Chemistry I, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel Lardizábal 3, 20018, San Sebastián, Spain.,JKERBASQUE, Basque Foundation for Science, University of the Basque Country UPV/EHU, Maria Diaz de Haro 3, 48013, Bilbao, Spain
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43
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Lim JYC, Marques I, Félix V, Beer PD. Enantioselective Anion Recognition by Chiral Halogen-Bonding [2]Rotaxanes. J Am Chem Soc 2017; 139:12228-12239. [PMID: 28777563 DOI: 10.1021/jacs.7b06144] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The application of chiral interlocked host molecules for discrimination of guest enantiomers has been largely overlooked, which is surprising given their unique three-dimensional binding cavities capable of guest encapsulation. Herein, we combined the stringent linear geometric interaction constraints of halogen bonding (XB), the noncovalent interaction between an electrophilic halogen atom and a Lewis base, with highly preorganized and conformationally restricted chiral cavities of [2]rotaxanes to achieve enantioselective anion recognition. Representing the first detailed investigation of the use of chiral XB rotaxanes for this purpose, extensive 1H NMR binding studies and molecular dynamics (MD) simulation experiments revealed that the chiral rotaxane cavity significantly enhances enantiodiscrimination compared to the non-interlocked free axle and macrocycle components. Furthermore, by examining the enantioselectivities of a family of structurally similar XB [2]rotaxanes containing different combinations of chiral and achiral macrocycle and axle components, the dominant influence of the chiral macrocycle in our rotaxane design for determining the effectiveness of chiral discrimination is demonstrated. MD simulations reveal the crucial geometric roles played by the XB interactions in orientating the bound enantiomeric anion guests for chiral selectivity, as well as the critical importance of the anions' hydration shells in governing binding affinity and enantiodiscrimination.
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Affiliation(s)
- Jason Y C Lim
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford , Mansfield Road, Oxford, OX1 3TA U.K
| | | | | | - Paul D Beer
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford , Mansfield Road, Oxford, OX1 3TA U.K
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44
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Mungalpara D, Stegmüller S, Kubik S. A neutral halogen bonding macrocyclic anion receptor based on a pseudocyclopeptide with three 5-iodo-1,2,3-triazole subunits. Chem Commun (Camb) 2017; 53:5095-5098. [DOI: 10.1039/c7cc02424j] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The converging arrangement of iodine atoms along a confined cavity causes a cyclic pseudopeptide with three 5-iodo-1,2,3-triazole subunits to interact with halides, in particular with chloride, in 2.5 vol% water/DMSO.
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Affiliation(s)
- Disha Mungalpara
- Technische Universität Kaiserslautern, Fachbereich Chemie – Organische Chemie, Erwin-Schrödinger-Straße
- Kaiserslautern
- Germany
| | - Simone Stegmüller
- Technische Universität Kaiserslautern, Fachbereich Chemie – Lebensmittelchemie & Toxikologie, Erwin-Schrödinger-Straße
- Kaiserslautern
- Germany
| | - Stefan Kubik
- Technische Universität Kaiserslautern, Fachbereich Chemie – Organische Chemie, Erwin-Schrödinger-Straße
- Kaiserslautern
- Germany
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45
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Christopherson JC, Potts KP, Bushuyev OS, Topić F, Huskić I, Rissanen K, Barrett CJ, Friščić T. Assembly and dichroism of a four-component halogen-bonded metal–organic cocrystal salt solvate involving dicyanoaurate(I) acceptors. Faraday Discuss 2017; 203:441-457. [DOI: 10.1039/c7fd00114b] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We describe the use of dicyanoaurate ions as linear ditopic metal–organic acceptors for the halogen bond-driven assembly of a dichroic metal–organic cocrystal based on azobenzene chromophores. Structural analysis by single crystal X-ray diffraction revealed that the material is a four-component solid, consisting of anticipated anionic metal–organic halogen-bonded chains based on dicyanoaurate ions, as well as complex potassium-based cations and discrete molecules of the crown ether 15-crown-5. Importantly, the structural analysis revealed the parallel alignment of the halogen-bonded chains required for dichroic behaviour, confirming that crystal engineering principles developed for the design of halogen-bonded dichroic organic cocrystals are also applicable to metal-based structures. In the broader context of crystal engineering, the structure of the herein reported dichroic material is additionally interesting as the presence of an ion pair, a neutral azobenzene and a molecule of a room-temperature liquid make it an example of a solid that simultaneously conforms to definitions of a salt, a cocrystal, and a solvate.
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Affiliation(s)
| | - Karlie P. Potts
- Department of Chemistry
- McGill University
- H3A 0B8 Montreal
- Canada
| | | | - Filip Topić
- University of Jyvaskyla
- Department of Chemistry
- Nanoscience Center
- Jyvaskyla
- Finland
| | - Igor Huskić
- Department of Chemistry
- McGill University
- H3A 0B8 Montreal
- Canada
| | - Kari Rissanen
- University of Jyvaskyla
- Department of Chemistry
- Nanoscience Center
- Jyvaskyla
- Finland
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