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Rabadán González I, McLean JT, Ostrovitsa N, Fitzgerald S, Mezzetta A, Guazzelli L, O'Shea DF, Scanlan EM. A thiol-ene mediated approach for peptide bioconjugation using 'green' solvents under continuous flow. Org Biomol Chem 2024; 22:2203-2210. [PMID: 38414440 DOI: 10.1039/d4ob00122b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/29/2024]
Abstract
Flow chemistry has emerged as an integral process within the chemical sector permitting energy efficient synthetic scale-up while improving safety and minimising solvent usage. Herein, we report the first applications of the photoactivated, radical-mediated thiol-ene reaction for peptide bioconjugation under continuous flow. Bioconjugation reactions employing deep eutectic solvents, bio-based solvents and fully aqueous systems are reported here for a range of biologically relevant peptide substrates. The use of a water soluble photoinitiator, Irgacure 2959, permitted synthesis of glycosylated peptides in fully aqueous conditions, obviating the need for addition of organic solvents and enhancing the green credentials of these rapid, photoactivated, bioconjugation reactions.
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Affiliation(s)
- Inés Rabadán González
- Trinity Biomedical Sciences Institute, Trinity College Dublin, 152-160 Pearse Street, Dublin 2, Ireland.
| | - Joshua T McLean
- Trinity Biomedical Sciences Institute, Trinity College Dublin, 152-160 Pearse Street, Dublin 2, Ireland.
| | - Nikita Ostrovitsa
- Trinity Biomedical Sciences Institute, Trinity College Dublin, 152-160 Pearse Street, Dublin 2, Ireland.
| | - Sheila Fitzgerald
- Department of Chemistry, RCSI, 123 St Stephen's Green, Dublin 2, Ireland
| | | | | | - Donal F O'Shea
- Department of Chemistry, RCSI, 123 St Stephen's Green, Dublin 2, Ireland
| | - Eoin M Scanlan
- Trinity Biomedical Sciences Institute, Trinity College Dublin, 152-160 Pearse Street, Dublin 2, Ireland.
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2
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Wu WQ, Qin HL. Synthesis of Pyrazolo[1,5- a]pyridinyl, Pyrazolo[1,5- a]quinolinyl, and Pyrazolo[5,1- a]isoquinolinyl Sulfonyl Fluorides via a [3 + 2] Annulation. J Org Chem 2023. [PMID: 36797220 DOI: 10.1021/acs.joc.2c02242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Abstract
A [3 + 2] cycloaddition reaction of N-aminopyridines, N-aminoquinolines, and N-aminoisoquinolines with 1-bromoethene-1-sulfonyl fluoride (BESF) was performed to obtain optimum yields of various useful pyrazolo[1,5-a]pyridinyl, pyrazolo[1,5-a]quinolinyl, and pyrazolo[5,1-a]isoquinolinyl sulfonyl fluorides (43-90% yield). The transformation process showed broad substrate specificity, mild reaction conditions, and operational simplicity. Therefore, the reaction has great applicable value in the field of medicinal chemistry and other disciplines.
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Affiliation(s)
- Wen-Qian Wu
- School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology, 205 Luoshi Road, Wuhan, 430070, P. R. China
| | - Hua-Li Qin
- School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology, 205 Luoshi Road, Wuhan, 430070, P. R. China
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3
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Fischer NH, Oliveira MT, Diness F. Chemical modification of proteins - challenges and trends at the start of the 2020s. Biomater Sci 2023; 11:719-748. [PMID: 36519403 DOI: 10.1039/d2bm01237e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Ribosomally expressed proteins perform multiple, versatile, and specialized tasks throughout Nature. In modern times, chemically modified proteins, including improved hormones, enzymes, and antibody-drug-conjugates have become available and have found advanced industrial and pharmaceutical applications. Chemical modification of proteins is used to introduce new functionalities, improve stability or drugability. Undertaking chemical reactions with proteins without compromising their native function is still a core challenge as proteins are large conformation dependent multifunctional molecules. Methods for functionalization ideally should be chemo-selective, site-selective, and undertaken under biocompatible conditions in aqueous buffer to prevent denaturation of the protein. Here the present challenges in the field are discussed and methods for modification of the 20 encoded amino acids as well as the N-/C-termini and protein backbone are presented. For each amino acid, common and traditional modification methods are presented first, followed by more recent ones.
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Affiliation(s)
- Niklas Henrik Fischer
- Department of Science and Environment, Roskilde University, Universitetsvej 1, DK-4000 Roskilde, Denmark. .,Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Maria Teresa Oliveira
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Frederik Diness
- Department of Science and Environment, Roskilde University, Universitetsvej 1, DK-4000 Roskilde, Denmark. .,Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
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4
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Harvey DJ. Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: An update for 2017-2018. MASS SPECTROMETRY REVIEWS 2023; 42:227-431. [PMID: 34719822 DOI: 10.1002/mas.21721] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2021] [Revised: 07/26/2021] [Accepted: 07/26/2021] [Indexed: 06/13/2023]
Abstract
This review is the tenth update of the original article published in 1999 on the application of matrix-assisted laser desorption/ionization mass spectrometry (MALDI) mass spectrometry to the analysis of carbohydrates and glycoconjugates and brings coverage of the literature to the end of 2018. Also included are papers that describe methods appropriate to glycan and glycoprotein analysis by MALDI, such as sample preparation techniques, even though the ionization method is not MALDI. Topics covered in the first part of the review include general aspects such as theory of the MALDI process, new methods, matrices, derivatization, MALDI imaging, fragmentation and the use of arrays. The second part of the review is devoted to applications to various structural types such as oligo- and poly-saccharides, glycoproteins, glycolipids, glycosides, and biopharmaceuticals. Most of the applications are presented in tabular form. The third part of the review covers medical and industrial applications of the technique, studies of enzyme reactions, and applications to chemical synthesis. The reported work shows increasing use of combined new techniques such as ion mobility and highlights the impact that MALDI imaging is having across a range of diciplines. MALDI is still an ideal technique for carbohydrate analysis and advancements in the technique and the range of applications continue steady progress.
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Affiliation(s)
- David J Harvey
- Nuffield Department of Medicine, Target Discovery Institute, University of Oxford, Oxford, UK
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5
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Qin HY, Gui H, Zhang ZW, Shu T, Qin HL. A regio- and stereoselective Heck-Matsuda process for construction of γ-aryl allylsulfonyl fluorides. RSC Adv 2022; 12:19402-19405. [PMID: 35865583 PMCID: PMC9251648 DOI: 10.1039/d2ra03733e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 06/27/2022] [Indexed: 11/24/2022] Open
Abstract
A highly efficient regio- and stereoselective Heck–Matsuda method was developed employing aryl diazoniums and allylsulfonyl fluorides for the construction of a class of novel γ-aryl allylsulfonyl fluorides in the presence of Pd(OAc)2 and PPh3. The method features excellent regio- and stereoselectivity (up to 100% E-selectivity), broad substrate scope and mild reaction conditions. Further application of γ-aryl allylsulfonyl fluoride in SuFEx reactions was achieved to provide their corresponding sulfonates and sulfonamides in excellent yields. A Heck–Matsuda reaction of aryl diazoniums with allylsulfonyl fluorides for the construction of γ-aryl allylsulfonyl fluorides was developed.![]()
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Affiliation(s)
- Hao-Yong Qin
- School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology Wuhan 430070 China
| | - Houying Gui
- School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology Wuhan 430070 China
| | - Zai-Wei Zhang
- School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology Wuhan 430070 China
| | - Tao Shu
- School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology Wuhan 430070 China
| | - Hua-Li Qin
- School of Chemistry, Chemical Engineering and Life Sciences, Wuhan University of Technology Wuhan 430070 China
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6
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Yang WF, Shu T, Chen HR, Qin HL, Tang H. A cascade reaction for regioselective construction of pyrazole-containing aliphatic sulfonyl fluorides. Org Biomol Chem 2022; 20:3506-3510. [PMID: 35420611 DOI: 10.1039/d2ob00515h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
A copper-catalyzed cascade reaction of α-diazocarbonyl compounds with ethenesulfonyl fluoride (ESF) is developed, affording a variety of highly functionalized pyrazolyl aliphatic sulfonyl fluorides in good to excellent yields (66-98%). This transformation features broad substrates, exclusive regioselectivity, high atom economy and operational simplicity, thus providing a straightforward method for the direct construction of pyrazole-containing aliphatic sulfonyl fluorides, which will provide great applicable value in medicinal chemistry and other related disciplines.
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Affiliation(s)
- Wen-Fei Yang
- School of Chemistry, Chemical Engineering and Life Sciences; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing, Wuhan University of Technology, Wuhan 430070, China.
| | - Tao Shu
- School of Chemistry, Chemical Engineering and Life Sciences; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing, Wuhan University of Technology, Wuhan 430070, China.
| | - Hong-Ru Chen
- School of Chemistry, Chemical Engineering and Life Sciences; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing, Wuhan University of Technology, Wuhan 430070, China.
| | - Hua-Li Qin
- School of Chemistry, Chemical Engineering and Life Sciences; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing, Wuhan University of Technology, Wuhan 430070, China.
| | - Haolin Tang
- School of Chemistry, Chemical Engineering and Life Sciences; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing, Wuhan University of Technology, Wuhan 430070, China.
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7
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Chen HR, Hu ZY, Qin HL, Tang H. A novel three-component reaction for constructing indolizine-containing aliphatic sulfonyl fluorides. Org Chem Front 2021. [DOI: 10.1039/d0qo01430c] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A copper-catalyzed three-component reaction for transforming quinolines, isoquinolines and pyridines to a class of indolizine-containing alkyl sulfonyl fluorides was developed.
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Affiliation(s)
- Hong-Ru Chen
- School of Chemistry
- Chemical Engineering and Life Science; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing
- Wuhan University of Technology
- Wuhan 430070
- China
| | - Zhen-Yu Hu
- School of Chemistry
- Chemical Engineering and Life Science; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing
- Wuhan University of Technology
- Wuhan 430070
- China
| | - Hua-Li Qin
- School of Chemistry
- Chemical Engineering and Life Science; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing
- Wuhan University of Technology
- Wuhan 430070
- China
| | - Haolin Tang
- School of Chemistry
- Chemical Engineering and Life Science; and State Key Laboratory of Advanced Technology for Materials Synthesis and Processing
- Wuhan University of Technology
- Wuhan 430070
- China
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8
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Kuhaudomlarp S, Cerofolini L, Santarsia S, Gillon E, Fallarini S, Lombardi G, Denis M, Giuntini S, Valori C, Fragai M, Imberty A, Dondoni A, Nativi C. Fucosylated ubiquitin and orthogonally glycosylated mutant A28C: conceptually new ligands for Burkholderia ambifaria lectin (BambL). Chem Sci 2020; 11:12662-12670. [PMID: 34094460 PMCID: PMC8163020 DOI: 10.1039/d0sc03741a] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Two orthogonal, metal free click reactions, enabled to glycosylate ubiquitin and its mutant A28C forming two protein scaffolds with high affinity for BambL, a lectin from the human pathogen Burkholderia ambifaria. A new fucoside analogue, with high affinity with BambL, firstly synthetized and co-crystallized with the protein target, provided the insights for sugar determinants grafting onto ubiquitin. Three ubiquitin-based glycosides were thus assembled. Fuc-Ub, presented several copies of the fucoside analogue, with proper geometry for multivalent effect; Rha-A28C, displayed one thio-rhamnose, known for its ability to tuning the immunological response; finally, Fuc-Rha-A28C, included both multiple fucoside analogs and the rhamnose residue. Fuc-Ub and Fuc-Rha-A28C ligands proved high affinity for BambL and unprecedented immune modulatory properties towards macrophages activation.
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Affiliation(s)
| | - Linda Cerofolini
- CIRMMP, University of Florence via Sacconi, 6 50019 Sesto F.no FI Italy
| | - Sabrina Santarsia
- Università di Firenze, Department of Chemistry via della Lastruccia, 3, 13, 50019 Sesto F.no FI Italy
| | - Emilie Gillon
- Université Grenoble Alpes, CNRS, CERMAV 38000 Grenoble France
| | - Silvia Fallarini
- Università del Piemonte Orientale, Department of Pharmaceutical Sciences 28100 Novara Italy
| | - Grazia Lombardi
- Università del Piemonte Orientale, Department of Pharmaceutical Sciences 28100 Novara Italy
| | - Maxime Denis
- Università di Firenze, Department of Chemistry via della Lastruccia, 3, 13, 50019 Sesto F.no FI Italy .,Giotto Biotech via Madonna del Piano, 6, 50019 Sesto F.no FI Italy
| | - Stefano Giuntini
- Università di Firenze, Department of Chemistry via della Lastruccia, 3, 13, 50019 Sesto F.no FI Italy .,CERM via Sacconi, 6, 50019 Sesto F.no FI Italy
| | - Carolina Valori
- Università di Firenze, Department of Chemistry via della Lastruccia, 3, 13, 50019 Sesto F.no FI Italy
| | - Marco Fragai
- Università di Firenze, Department of Chemistry via della Lastruccia, 3, 13, 50019 Sesto F.no FI Italy .,CERM via Sacconi, 6, 50019 Sesto F.no FI Italy
| | - Anne Imberty
- Université Grenoble Alpes, CNRS, CERMAV 38000 Grenoble France
| | - Alessandro Dondoni
- Interdisciplinary Center for the Study of Inflammation, University of Ferrara 44121 Ferrara Italy
| | - Cristina Nativi
- Università di Firenze, Department of Chemistry via della Lastruccia, 3, 13, 50019 Sesto F.no FI Italy
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9
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Alvarez Dorta D, Deniaud D, Mével M, Gouin SG. Tyrosine Conjugation Methods for Protein Labelling. Chemistry 2020; 26:14257-14269. [DOI: 10.1002/chem.202001992] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 06/09/2020] [Indexed: 12/23/2022]
Affiliation(s)
| | - David Deniaud
- CNRS, CEISAM UMR, 6230 Université de Nantes 44000 Nantes France
| | - Mathieu Mével
- CHU de Nantes, INSERM UMR 1089 Université de Nantes 44200 Nantes France
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10
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Meguro Y, Noguchi M, Li G, Shoda SI. Efficient generation of thiolate sugars from glycosyl Bunte salts and its application to S-glycoside synthesis. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.152198] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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11
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Zhang X, Fang W, Lekkala R, Tang W, Qin H. An Easy, General and Practical Method for the Construction of Alkyl Sulfonyl Fluorides. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000515] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Xu Zhang
- State Key Laboratory of Silicate Materials for Architecturesand School of ChemistryChemical Engineering and Life ScienceWuhan University of Technology 205 Luoshi Road Wuhan 430070 People's Republic of China
| | - Wan‐Yin Fang
- State Key Laboratory of Silicate Materials for Architecturesand School of ChemistryChemical Engineering and Life ScienceWuhan University of Technology 205 Luoshi Road Wuhan 430070 People's Republic of China
| | - Ravindar Lekkala
- State Key Laboratory of Silicate Materials for Architecturesand School of ChemistryChemical Engineering and Life ScienceWuhan University of Technology 205 Luoshi Road Wuhan 430070 People's Republic of China
| | - Wenjian Tang
- School of PharmacyAnhui Province Key Laboratory of Major Autoimmune DiseasesAnhui Medical University Hefei 230032 People's Republic of China
| | - Hua‐Li Qin
- State Key Laboratory of Silicate Materials for Architecturesand School of ChemistryChemical Engineering and Life ScienceWuhan University of Technology 205 Luoshi Road Wuhan 430070 People's Republic of China
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12
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Abstract
From a selection of research topics carried out in our laboratory during the last twenty years it becomes apparent that our main target was the discovery of new or improved synthetic methods together with new properties. Our efforts were made with the aim of being of some utility to other fields of research, with particular emphasis to glycobiology and heterocyle-based bioorganic chemistry. We performed new chemistry mainly in the field of carbohydrate manipulations taking as a primary rule the simplicity and efficiency manners. Toward this end, modern synthetic tools and approaches were employed such as heterocyle-based transformations, multicomponent reactions, organocatalysis, click azide–alkyne cycloadditions, reactions in ionic liquids, click photoinduced thiol-ene coupling, and click sulfur–fluoride exchange chemistry. With these potent methodologies in hand, the syntheses of carbohydrate containing amino acids up to proteins glycosylation were performed.1 Heterocyclic Glycoconjugates and Amino Acids2 Triazole-Linked Oligonucleotides: Application of Click CuAAC3 Non-Natural Glycosyl Amino Acids4 Non-Natural Oligosaccharides5 Calixarene-Based Glycoclusters6 Carbohydrate-Based Building Blocks7 Homoazasugars and Aza-C-disaccharides8 Synthesis of Glycodendrimers9 Peptide and Protein Glycoconjugates10 Conclusions
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13
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Abstract
Coupling of sulfonyl fluorides, fluorosulfates and iminosulfur oxydifluorides with proteins gave the corresponding sulfonamide, sulfamate and sulfamide adducts under mild conditions.
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Affiliation(s)
- Alberto Marra
- Institut des Biomolécules Max Mousseron (IBMM)
- UMR 5247
- Université de Montpellier
- CNRS
- Ecole Nationale Supérieure de Chimie de Montpellier
| | - Cristina Nativi
- Dipartimento di Chimica “Ugo Schiff”
- Università di Firenze
- 50019 Sesto Fiorentino (FI)
- Italy
| | - Alessandro Dondoni
- Interdisciplinary Center for the Study of Inflammation
- Università di Ferrara
- 44121 Ferrara
- Italy
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14
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Leng J, Alharbi NS, Qin HL. Construction of α-(Hetero)aryl Ethenesulfonyl Fluorides for SuFEx Click Chemistry. European J Org Chem 2019. [DOI: 10.1002/ejoc.201901106] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Jing Leng
- State Key Laboratory of Silicate Materials for Architectures; and; School of Chemistry, Chemical Engineering and Life Science; Wuhan University of Technology; 430070 Wuhan Hubei Province People's Republic of China
| | - Njud S. Alharbi
- Biotechnology Research group; Deportment of Biological Sciences; Faculty of Science; King Abdulaziz University; Jeddah Saudi Arabia
| | - Hua-Li Qin
- State Key Laboratory of Silicate Materials for Architectures; and; School of Chemistry, Chemical Engineering and Life Science; Wuhan University of Technology; 430070 Wuhan Hubei Province People's Republic of China
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