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Herrera-Ochoa D, Llano I, Ripoll C, Cybulski P, Kreuzer M, Rocha S, García-Frutos EM, Bravo I, Garzón-Ruiz A. Protein aggregation monitoring in cells under oxidative stress: a novel fluorescent probe based on a 7-azaindole-BODIPY derivative. J Mater Chem B 2024; 12:7577-7590. [PMID: 38984432 DOI: 10.1039/d4tb00567h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/11/2024]
Abstract
The development of new fluorescent probes as molecular sensors is a critical step for the understanding of molecular mechanisms. BODIPY-based probes offer versatility due to their high fluorescence quantum yields, photostability, and tunable absorption/emission wavelengths. Here, we report the synthesis and evaluation of a novel 7-azaindole-BODIPY derivative to probe hydrophobic proteins as well as protein misfolding and aggregation. In organic solvents, this compound shows two efficiently interconverting emissive excited states. In aqueous environments, it forms molecular aggregates with unique photophysical properties. The complex photophysics of the 7-azaindole-BODIPY derivative was explored for sensing applications. In the presence of albumin, the compound is stabilized in hydrophobic protein regions, significantly increasing its fluorescence emission intensity and lifetime. Similar effects occur in the presence of protein aggregates but not with other macromolecules like pepsin, DNA, Ficoll 40, and coconut oil. Fluorescence lifetime imaging microscopy (FLIM) and two-photon fluorescence microscopy on breast (MCF-7) and lung (A549) cancer cells incubated with this compound display longer fluorescence lifetimes and higher emission intensity under oxidative stress. Synchrotron FTIR micro spectroscopy confirmed that the photophysical changes observed were due to protein misfolding and aggregation caused by the oxidative stress. These findings demonstrate that this compound can serve as a fluorescent probe to monitor protein misfolding and aggregation triggered by oxidative stress.
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Affiliation(s)
- Diego Herrera-Ochoa
- Departamento de Química Física, Facultad de Farmacia, Universidad de Castilla-La Mancha, Av. Dr José María Sánchez Ibáñez, s/n, 02071 Albacete, Spain.
| | - Iván Llano
- Instituto de Ciencia de Materiales de Madrid (ICMM), CSIC, Cantoblanco, 28049 Madrid, Spain.
| | - Consuelo Ripoll
- Departamento de Química Física, Facultad de Farmacia, Universidad de Castilla-La Mancha, Av. Dr José María Sánchez Ibáñez, s/n, 02071 Albacete, Spain.
| | - Pierre Cybulski
- Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Leuven Chem&Tech, Celestijnenlaan 200F, Leuven, 3001, Belgium.
| | - Martin Kreuzer
- ALBA Synchrotron Light Source, Carrer de la Llum 2-26, Cerdanyola del Valles, 08290 Cerdanyola Del Vallès, Barcelona, Spain
| | - Susana Rocha
- Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Leuven Chem&Tech, Celestijnenlaan 200F, Leuven, 3001, Belgium.
| | - Eva M García-Frutos
- Instituto de Ciencia de Materiales de Madrid (ICMM), CSIC, Cantoblanco, 28049 Madrid, Spain.
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá, 28805 Alcalá de Henares, Madrid, Spain
| | - Iván Bravo
- Departamento de Química Física, Facultad de Farmacia, Universidad de Castilla-La Mancha, Av. Dr José María Sánchez Ibáñez, s/n, 02071 Albacete, Spain.
| | - Andrés Garzón-Ruiz
- Departamento de Química Física, Facultad de Farmacia, Universidad de Castilla-La Mancha, Av. Dr José María Sánchez Ibáñez, s/n, 02071 Albacete, Spain.
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2
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Bhuyan R, Mony J, Kotov O, Castellanos GW, Gómez Rivas J, Shegai TO, Börjesson K. The Rise and Current Status of Polaritonic Photochemistry and Photophysics. Chem Rev 2023; 123:10877-10919. [PMID: 37683254 PMCID: PMC10540218 DOI: 10.1021/acs.chemrev.2c00895] [Citation(s) in RCA: 20] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Indexed: 09/10/2023]
Abstract
The interaction between molecular electronic transitions and electromagnetic fields can be enlarged to the point where distinct hybrid light-matter states, polaritons, emerge. The photonic contribution to these states results in increased complexity as well as an opening to modify the photophysics and photochemistry beyond what normally can be seen in organic molecules. It is today evident that polaritons offer opportunities for molecular photochemistry and photophysics, which has caused an ever-rising interest in the field. Focusing on the experimental landmarks, this review takes its reader from the advent of the field of polaritonic chemistry, over the split into polariton chemistry and photochemistry, to present day status within polaritonic photochemistry and photophysics. To introduce the field, the review starts with a general description of light-matter interactions, how to enhance these, and what characterizes the coupling strength. Then the photochemistry and photophysics of strongly coupled systems using Fabry-Perot and plasmonic cavities are described. This is followed by a description of room-temperature Bose-Einstein condensation/polariton lasing in polaritonic systems. The review ends with a discussion on the benefits, limitations, and future developments of strong exciton-photon coupling using organic molecules.
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Affiliation(s)
- Rahul Bhuyan
- Department
of Chemistry and Molecular Biology, University
of Gothenburg, 412 96 Göteborg, Sweden
| | - Jürgen Mony
- Department
of Chemistry and Molecular Biology, University
of Gothenburg, 412 96 Göteborg, Sweden
| | - Oleg Kotov
- Department
of Physics, Chalmers University of Technology, 412 96 Göteborg, Sweden
| | - Gabriel W. Castellanos
- Department
of Applied Physics and Science Education, Eindhoven Hendrik Casimir
Institute and Institute for Complex Molecular Systems, Eindhoven University of Technology, 5612 AE Eindhoven, The Netherlands
| | - Jaime Gómez Rivas
- Department
of Applied Physics and Science Education, Eindhoven Hendrik Casimir
Institute and Institute for Complex Molecular Systems, Eindhoven University of Technology, 5612 AE Eindhoven, The Netherlands
| | - Timur O. Shegai
- Department
of Physics, Chalmers University of Technology, 412 96 Göteborg, Sweden
| | - Karl Börjesson
- Department
of Chemistry and Molecular Biology, University
of Gothenburg, 412 96 Göteborg, Sweden
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3
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Couto RC, Kowalewski M. Suppressing non-radiative decay of photochromic organic molecular systems in the strong coupling regime. Phys Chem Chem Phys 2022; 24:19199-19208. [PMID: 35861014 PMCID: PMC9382694 DOI: 10.1039/d2cp00774f] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Accepted: 07/10/2022] [Indexed: 11/21/2022]
Abstract
The lifetimes of electronic excited states have a strong influence on the efficiency of organic solar cells. However, in some molecular systems a given excited state lifetime is reduced due to the non-radiative decay through conical intersections. Several strategies may be used to suppress this decay channel. The use of the strong light-matter coupling provided in optical nano-cavities is the focus of this paper. Here, we consider the meso-tert-butyl-4,4-difluoro-4-bora-3a,4a-diaza-s-indacene molecule (meso-tert-butyl-BODIPY) as a showcase of how strong and ultrastrong coupling might help in the development of organic solar cells. The meso-tert-butyl-BODIPY is known for its low fluorescence yield caused by the non-radiative decay through a conical intersection. However, we show here that, by considering this system within a cavity, the strong coupling can lead to significant changes in the multidimensional landscape of the potential energy surfaces of meso-tert-butyl-BODIPY, suppressing almost completely the decay of the excited state wave packet back to the ground state. By means of multi configuration electronic structure calculations and nuclear wave packet dynamics, the coupling with the cavity is analyzed in-depth to provide further insight of the interaction. By fine-tuning the cavity field strength and resonance frequency, we show that one can change the nuclear dynamics in the excited state, and control the non-radiative decay. This may lead to a faster and more efficient population transfer or the suppression of it.
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Affiliation(s)
- Rafael C Couto
- Department of Physics, Stockholm University, Albanova University Center, SE-106 91 Stockholm, Sweden.
| | - Markus Kowalewski
- Department of Physics, Stockholm University, Albanova University Center, SE-106 91 Stockholm, Sweden.
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Mony J, Yu Y, Schäfer C, Mallick S, Kushwaha K, Börjesson K. Interplay between Polaritonic and Molecular Trap States. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2022; 126:7965-7972. [PMID: 35592736 PMCID: PMC9109220 DOI: 10.1021/acs.jpcc.2c01239] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Revised: 04/19/2022] [Indexed: 06/15/2023]
Abstract
Strong exciton-photon coupling exhibits the possibility to modify the photophysical properties of organic molecules. This is due to the introduction of hybrid light-matter states, called polaritons, which have unique physical and optical properties. Those strongly coupled systems provide altered excited-state dynamics in comparison to the bare molecule case. In this study, we investigate the interplay between polaritonic and molecular trap states, such as excimers. The molecules used in this study show either prompt or delayed emission from trap states. For both cases, a clear dependency on the exciton-photon energy tuning was observed. Polaritonic emission gradually increased with a concurrent removal of aggregation-induced emission when the systems were tuned toward lower energies. For prompt emission, it is not clear whether the experimental results are best explained by a predominant relaxation toward the lower polariton after excitation or by a direct excimer to polariton transition. However, for the delayed emission case, trap states are formed on the initially formed triplet manifold, making it evident that an excimer-to-polariton transition has occurred. These results unveil the possibility to control the trap state population by creating a strongly coupled system, which may form a mitigation strategy to counteract detrimental trap states in photonic applications.
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Schäfer C, Mony J, Olsson T, Börjesson K. Effect of the Aza-N-Bridge and Push-Pull Moieties: A Comparative Study between BODIPYs and Aza-BODIPYs. J Org Chem 2022; 87:2569-2579. [PMID: 35188769 PMCID: PMC8902755 DOI: 10.1021/acs.joc.1c02525] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In the field of fluorescent dyes, difluoroboron-dipyrromethenes (BODIPY) have a highly respected position. To predict their photophysical properties prior to synthesis and therefore to successfully design molecules specifically for one's needs, a solid structure-function understanding based on experimental observations is vital. This work delivers a photophysical evaluation of BODIPY and aza-BODIPY derivatives equipped with different electron-withdrawing/-donating substituents. Using combinatorial chemistry, pyrroles substituted with electron-donating/-withdrawing substituents were condensed together in two different manners, thus providing two sets of molecules. The only difference between the two sets is the bridging unit providing a so far lacking comparison between BODIPYs and aza-BODIPYs structural homologues. Replacing the meso-methine bridge with an aza-N bridge results in a red-shifted transition and considerably different, temperature-activated, excited-state relaxation pathways. The effect of electron-donating units on the absorption but not emission for BODIPYs was suppressed compared to aza-BODIPYs. This result could be evident in a substitution pattern-dependent Stokes shift. The outlook of this study is a deeper understanding of the structure-optics relationship of the (aza)-BODIPY-dye class, leading to an improvement in the de novo design of tailor-made molecules for future applications.
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Affiliation(s)
- Clara Schäfer
- Department of Chemistry and Molecular Biology, University of Gothenburg, Kemivägen 10, 41296 Gothenburg, Sweden
| | - Jürgen Mony
- Department of Chemistry and Molecular Biology, University of Gothenburg, Kemivägen 10, 41296 Gothenburg, Sweden
| | - Thomas Olsson
- Department of Chemistry and Molecular Biology, University of Gothenburg, Kemivägen 10, 41296 Gothenburg, Sweden
| | - Karl Börjesson
- Department of Chemistry and Molecular Biology, University of Gothenburg, Kemivägen 10, 41296 Gothenburg, Sweden
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Renken S, Pandya R, Georgiou K, Jayaprakash R, Gai L, Shen Z, Lidzey DG, Rao A, Musser AJ. Untargeted effects in organic exciton-polariton transient spectroscopy: A cautionary tale. J Chem Phys 2021; 155:154701. [PMID: 34686047 DOI: 10.1063/5.0063173] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Strong light-matter coupling to form exciton- and vibropolaritons is increasingly touted as a powerful tool to alter the fundamental properties of organic materials. It is proposed that these states and their facile tunability can be used to rewrite molecular potential energy landscapes and redirect photophysical pathways, with applications from catalysis to electronic devices. Crucial to their photophysical properties is the exchange of energy between coherent, bright polaritons and incoherent dark states. One of the most potent tools to explore this interplay is transient absorption/reflectance spectroscopy. Previous studies have revealed unexpectedly long lifetimes of the coherent polariton states, for which there is no theoretical explanation. Applying these transient methods to a series of strong-coupled organic microcavities, we recover similar long-lived spectral effects. Based on transfer-matrix modeling of the transient experiment, we find that virtually the entire photoresponse results from photoexcitation effects other than the generation of polariton states. Our results suggest that the complex optical properties of polaritonic systems make them especially prone to misleading optical signatures and that more challenging high-time-resolution measurements on high-quality microcavities are necessary to uniquely distinguish the coherent polariton dynamics.
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Affiliation(s)
- Scott Renken
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
| | - Raj Pandya
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, CB3 0HE Cambridge, United Kingdom
| | - Kyriacos Georgiou
- Department of Physics and Astronomy, University of Sheffield, Sheffield, United Kingdom
| | - Rahul Jayaprakash
- Department of Physics and Astronomy, University of Sheffield, Sheffield, United Kingdom
| | - Lizhi Gai
- Key Laboratory of Organosilicon Chemistry and Material Technology, Ministry of Education, Hangzhou Normal University, Hangzhou 311121, China
| | - Zhen Shen
- State Key Laboratory of Coordination and Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210046, China
| | - David G Lidzey
- Department of Physics and Astronomy, University of Sheffield, Sheffield, United Kingdom
| | - Akshay Rao
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, CB3 0HE Cambridge, United Kingdom
| | - Andrew J Musser
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
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Paradiz Dominguez M, Demirkurt B, Grzelka M, Bonn D, Galmiche L, Audebert P, Brouwer AM. Fluorescent Liquid Tetrazines. Molecules 2021; 26:molecules26196047. [PMID: 34641592 PMCID: PMC8512366 DOI: 10.3390/molecules26196047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Revised: 09/22/2021] [Accepted: 09/24/2021] [Indexed: 11/16/2022] Open
Abstract
Tetrazines with branched alkoxy substituents are liquids at ambient temperature that despite the high chromophore density retain the bright orange fluorescence that is characteristic of this exceptional fluorophore. Here, we study the photophysical properties of a series of alkoxy-tetrazines in solution and as neat liquids. We also correlate the size of the alkoxy substituents with the viscosity of the liquids. We show using time-resolved spectroscopy that intersystem crossing is an important decay pathway competing with fluorescence, and that its rate is higher for 3,6-dialkoxy derivatives than for 3-chloro-6-alkoxytetrazines, explaining the higher fluorescence quantum yields for the latter. Quantum chemical calculations suggest that the difference in rate is due to the activation energy required to distort the tetrazine core such that the nπ*S1 and the higher-lying ππ*T2 states cross, at which point the spin-orbit coupling exceeding 10 cm-1 allows for efficient intersystem crossing to occur. Femtosecond time-resolved anisotropy studies in solution allow us to measure a positive relationship between the alkoxy chain lengths and their rotational correlation times, and studies in the neat liquids show a fast decay of the anisotropy consistent with fast exciton migration in the neat liquid films.
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Affiliation(s)
- Maximilian Paradiz Dominguez
- Van’t Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands; (M.P.D.); (B.D.)
| | - Begüm Demirkurt
- Van’t Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands; (M.P.D.); (B.D.)
| | - Marion Grzelka
- Institute of Physics, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands; (M.G.); (D.B.)
| | - Daniel Bonn
- Institute of Physics, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands; (M.G.); (D.B.)
| | - Laurent Galmiche
- PPSM, ENS Cachan, CNRS, Université Paris Saclay, 94235 Cachan, France; (L.G.); (P.A.)
| | - Pierre Audebert
- PPSM, ENS Cachan, CNRS, Université Paris Saclay, 94235 Cachan, France; (L.G.); (P.A.)
| | - Albert M. Brouwer
- Van’t Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands; (M.P.D.); (B.D.)
- Advanced Research Center for Nanolithography, Science Park 106, 1098 XG Amsterdam, The Netherlands
- Correspondence:
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