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Li W, Chen J, Zhang C, Li Y, Wan L, Chen X. Mixing behavior of p-terphenyl-3,5,3',5'-tetracarboxylic acid with trimesic acid at the solid-liquid interface. Phys Chem Chem Phys 2021; 23:25896-25900. [PMID: 34779445 DOI: 10.1039/d1cp04770a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
The molecular self-assembly of carboxylic acid molecules on a solid surface plays an important role in understanding the nanoscale-precision construction of functional patterns. In this study, the mixing behavior of p-terphenyl-3,5,3',5'-tetracarboxylic acid (TPTC) and trimesic acid (TMA) on a highly oriented pyrolytic graphite surface was studied by scanning tunneling microscopy (STM). The STM images show how the presence of a small percentage of TPTC molecules adsorbed onto TMA molecules can drastically change the on-surface self-assembly behavior of aromatic tetracarboxylic acid by initiating the nucleation and growth of a different polymorph. Molecular mechanics and density functional theory simulations of the adsorption energy and the additional stabilizing energy, induced by hydrogen bonds during assembly formations, provide insights into the relative stability of different assembled structures. Moreover, STM-based "nanoshaving" was conducted to confirm that the template layer underneath the second layer is indeed a random network.
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Affiliation(s)
- Wei Li
- School of Science, Nanchang Institute of Technology, Nanchang 330099, P. R. China. .,Key Laboratory of Optoelectronic Materials and New Energy Technology, Nanchang Institute of Technology, Nanchang 330099, P. R. China.,Nanchang Key Laboratory of Photoelectric Conversion and Energy Storage Materials, Nanchang 330099, P. R. China
| | - Jianbin Chen
- Guangdong Titans Intelligent Power Co., Ltd, Zhuhai, 519060, P. R. China
| | - Chengdong Zhang
- School of Science, Nanchang Institute of Technology, Nanchang 330099, P. R. China.
| | - Yudie Li
- School of Science, Nanchang Institute of Technology, Nanchang 330099, P. R. China.
| | - Lijia Wan
- School of Science, Nanchang Institute of Technology, Nanchang 330099, P. R. China. .,Key Laboratory of Optoelectronic Materials and New Energy Technology, Nanchang Institute of Technology, Nanchang 330099, P. R. China.,Nanchang Key Laboratory of Photoelectric Conversion and Energy Storage Materials, Nanchang 330099, P. R. China
| | - Xiaoling Chen
- School of Science, Nanchang Institute of Technology, Nanchang 330099, P. R. China. .,Key Laboratory of Optoelectronic Materials and New Energy Technology, Nanchang Institute of Technology, Nanchang 330099, P. R. China.,Nanchang Key Laboratory of Photoelectric Conversion and Energy Storage Materials, Nanchang 330099, P. R. China
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Steeno R, Minoia A, Gimenez-Lopez MC, Blunt MO, Champness NR, Lazzaroni R, Mali KS, De Feyter S. Molecular dopant determines the structure of a physisorbed self-assembled molecular network. Chem Commun (Camb) 2021; 57:1454-1457. [PMID: 33438693 DOI: 10.1039/d0cc07338e] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
A small percentage of an impurity was shown, via scanning tunneling microscopy, to drastically change the on-surface self-assembly behavior of an aromatic tetracarboxylic acid, by initiating the nucleation and growth of a different polymorph. Molecular modelling simulations were used to shed further light onto the dopant-controlled assembly behaviour.
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Affiliation(s)
- Roelof Steeno
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
| | - Andrea Minoia
- Laboratory for Chemistry of Novel Materials, Materials Research Institute, University of Mons, Place du Parc 20, 7000 Mons, Belgium
| | - Maria C Gimenez-Lopez
- Centro Singular de Investigacion en Quimica Biolóxica e Materiais Moleculares (CiQUS), Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - Matthew O Blunt
- Department of Chemistry, University College London, 20 Gordon Street, London, WC1H 0AJ, UK
| | - Neil R Champness
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK
| | - Roberto Lazzaroni
- Laboratory for Chemistry of Novel Materials, Materials Research Institute, University of Mons, Place du Parc 20, 7000 Mons, Belgium
| | - Kunal S Mali
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
| | - Steven De Feyter
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
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Habets T, Lensen D, Speller S, Elemans JAAW. Self-Assembly of Covalently Linked Porphyrin Dimers at the Solid-Liquid Interface. Molecules 2019; 24:E3018. [PMID: 31434280 PMCID: PMC6720350 DOI: 10.3390/molecules24163018] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 08/12/2019] [Accepted: 08/17/2019] [Indexed: 12/20/2022] Open
Abstract
The synthesis and surface self-assembly behavior of two types of metal-porphyrin dimers is described. The first dimer type consists of two porphyrins linked via a rigid conjugated spacer, and the second type has an alkyne linker, which allows rotation of the porphyrin moieties with respect to each other. The conjugated dimers were equipped with two copper or two manganese centers, while the flexible dimers allowed a modular built-up that also made the incorporation of two different metal centers possible. The self-assembly of the new porphyrin dimers at a solid-liquid interface was investigated at the single-molecule scale using scanning tunneling microscopy (STM). All dimers formed monolayers, of which the stability and the internal degree of ordering of the molecules depended on the metal centers in the porphyrins. While in all monolayers the dimers were oriented coplanar with respect to the underlying surface ('face-on'), the flexible dimer containing a manganese and a copper center could be induced, via the application of a voltage pulse in the STM setup, to self-assemble into monolayers in which the porphyrin dimers adopted a non-common perpendicular ('edge-on') geometry with respect to the surface.
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Affiliation(s)
- Thomas Habets
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Dennis Lensen
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Sylvia Speller
- Institute of Physics, University of Rostock, Albert-Einstein-Straße 23, 18059 Rostock, Germany
- Department Life, Light & Matter-University of Rostock, 18051 Rostock, Germany
| | - Johannes A A W Elemans
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
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Verstraete L, Smart J, Hirsch BE, De Feyter S. Unidirectional supramolecular self-assembly inside nanocorrals via in situ STM nanoshaving. Phys Chem Chem Phys 2018; 20:27482-27489. [PMID: 30358776 DOI: 10.1039/c8cp05316b] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Self-assembly of an alkylated diacetylene derivative is spatially confined via in situ scanning tunneling microscopy (STM) nanoshaving inside covalently modified highly ordered pyrolytic graphite (CM-HOPG). In contrast to unconstrained self-assembly that occurs randomly along three thermodynamically equivalent surface lattice directions, spatially confined assemblies are shown to form along chosen substrate orientations. Experimental statistics suggest two mechanisms for breaking the rotational degeneracy of the surface. First, the assembly orientation is biased via lateral confinement inside nanocorrals that do not match the substrate symmetry. Second, an interaction between the assembling molecules and the STM tip during nanoshaving guides 2D crystal nucleation and growth. The results presented here open new possibilities to regulate and orient self-assembled architectures via in situ nanomechanical manipulation techniques and provide mechanistic insights into the process.
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Affiliation(s)
- Lander Verstraete
- Department of Chemistry, Division of Molecular Imaging and Photonics, KU Leuven-University of Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
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Carvalho MA, Dekkiche H, Karmazin L, Sanchez F, Vincent B, Kanesato M, Kikkawa Y, Ruppert R. Synthesis and Study at a Solid/Liquid Interface of Porphyrin Dimers Linked by Metal Ions. Inorg Chem 2017; 56:15081-15090. [DOI: 10.1021/acs.inorgchem.7b02422] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mary-Ambre Carvalho
- Institut de Chimie, UMR 7177
du CNRS, Université de Strasbourg, 4, rue Blaise Pascal, 67000, Strasbourg, France
| | - Hervé Dekkiche
- Institut de Chimie, UMR 7177
du CNRS, Université de Strasbourg, 4, rue Blaise Pascal, 67000, Strasbourg, France
| | - Lydia Karmazin
- Institut de Chimie, UMR 7177
du CNRS, Université de Strasbourg, 4, rue Blaise Pascal, 67000, Strasbourg, France
| | - Fabien Sanchez
- Institut de Chimie, UMR 7177
du CNRS, Université de Strasbourg, 4, rue Blaise Pascal, 67000, Strasbourg, France
| | - Bruno Vincent
- Institut de Chimie, UMR 7177
du CNRS, Université de Strasbourg, 4, rue Blaise Pascal, 67000, Strasbourg, France
| | - Masatoshi Kanesato
- National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Yoshihiro Kikkawa
- National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Romain Ruppert
- Institut de Chimie, UMR 7177
du CNRS, Université de Strasbourg, 4, rue Blaise Pascal, 67000, Strasbourg, France
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Yu Y, Yang Y, Wang C. Identification of Core Segment of Amyloidal Peptide Mediated by Chaperone Molecules by using Scanning Tunneling Microscopy. Chemphyschem 2015; 16:2995-9. [DOI: 10.1002/cphc.201500340] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2015] [Revised: 06/25/2015] [Indexed: 11/09/2022]
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