Fungal traits help to understand the decomposition of simple and complex plant litter

Litter decomposition is a key ecosystem process, relevant for the release and storage of nutrients and carbon in soil. Soil fungi are one of the dominant drivers of organic matter decomposition, but fungal taxa differ substantially in their functional ability to decompose plant litter. Knowledge is mostly based on observational data and subsequent molecular analyses and in vitro studies have been limited to forest ecosystems. In order to better understand functional traits of saprotrophic soil fungi in grassland ecosystems, we isolated 31 fungi from a natural grassland and performed several in vitro studies testing for i) leaf and wood litter decomposition, ii) the ability to use carbon sources of differing complexity, iii) the enzyme repertoire. Decomposition strongly varied among phyla and isolates, with Ascomycota decomposing the most and Mucoromycota decomposing the least. The phylogeny of the fungi and their ability to use complex carbon were the most important predictors for decomposition. Our findings show that it is crucial to understand the role of individual members and functional groups within the microbial community. This is an important way forward to understand the role of microbial community composition for the prediction of litter decomposition and subsequent potential carbon storage in grassland soils.

Biodiversity mitigates drought effects in the decomposer system across biomes

Multiple facets of global change affect the earth system interactively, with complex consequences for ecosystem functioning and stability. Simultaneous climate and biodiversity change are of particular concern, because biodiversity may contribute to ecosystem resistance and resilience and may mitigate climate change impacts. Yet, the extent and generality of how climate and biodiversity change interact remain insufficiently understood, especially for the decomposition of organic matter, a major determinant of the biosphere-atmosphere carbon feedbacks. With an inter-biome field experiment using large rainfall exclusion facilities, we tested how drought, a common prediction of climate change models for many parts of the world, and biodiversity in the decomposer system drive decomposition in forest ecosystems interactively. Decomposing leaf litter lost less carbon (C) and especially nitrogen (N) in five different forest biomes following partial rainfall exclusion compared to conditions without rainfall exclusion. An increasing complexity of the decomposer community alleviated drought effects, with full compensation when large-bodied invertebrates were present. Leaf litter mixing increased diversity effects, with increasing litter species richness, which contributed to counteracting drought effects on C and N loss, although to a much smaller degree than decomposer community complexity. Our results show at a relevant spatial scale covering distinct climate zones that both, the diversity of decomposer communities and plant litter in forest floors have a strong potential to mitigate drought effects on C and N dynamics during decomposition. Preserving biodiversity at multiple trophic levels contributes to ecosystem resistance and appears critical to maintain ecosystem processes under ongoing climate change.

Nitrogen and Microelements Co-Drive the Decomposition of Typical Grass Litter in the Loess Plateau, China

In grassland ecosystems, the decomposition of litter serves as a vital conduit for nutrient transfer between plants and soil. The aim of this study was to depict the dynamic process of grass litter decomposition and explore its major driver. Three typical grasses [Stipa bungeana Trin (St. B), Artemisia sacrorun Ledeb (Ar. S), and Thymus mongolicus Ronniger (Th. M)] were selected for long-term litter decomposition. Experiments were conducted using three single litters, namely, St. B, Ar. S, and Th. M, and four different compositions of mixed litter: ML1 (55% St. B and 45% Th. M), ML2 (55% St. B and 45% Ar. S), ML3 (75% St. B and 25% Th. M), and ML4 (75% St. B and 25% Ar. S). The dynamic patterns of mass and microelements (Ca, Mg, Fe, Mn, Cu, and Zn) within different litter groups were analyzed. Our findings indicated that, after 1035 days of decomposition, the proportion of residual mass for the single litters was as follows: Th. M (60.6%) > St. B (47.3%) > Ar. S (44.3%), and for the mixed groups it was ML1 (48.0%) > ML3 (41.6%) > ML2 (40.9) > ML4 (38.4%). Mixed cultivation of the different litter groups accelerated the decomposition process, indicating that the mixture of litters had a synergistic effect on litter decomposition. The microelements of the litter exhibited an initial short-term increase followed by long-term decay. After 1035 days of decomposition, the microelements released from the litter were, in descending order, Mg > Ca > Fe > Cu > Mn > Zn. Compared to the separately decomposed St. B litter, mixing led to an inhibition of the release of Ca (antagonistic effect), while it promoted the release of Mg, Cu, and Zn (synergistic effect). For the single litter, the stepwise regression analysis showed that Ca was the dominant factor determining early litter decomposition. Mg, Mn, and Cu were the dominant factors regulating later litter decomposition. For the mixed litter groups, Ca, Mn, and Mg were the dominant factors closely related to early decomposition, and TN emerged as a key factor regulating the mass loss of mixtures during later decomposition. In summary, nitrogen and microelements co-drive the decomposition of typical grass litter. Our study underscores that, in the succession process of grassland, the presence of multiple co-existing species led to a faster loss of plant-derived materials (litter mass and internal elements), which was primarily modulated by species identity and uniformity.

The synergistic effects of a leaf mixture on decomposition change with a period of terrestrial exposure prior to immersion in a stream

The effect of mixing litter on decomposition has received considerable attention in terrestrial and aquatic (but rarely in both) ecosystems, with a striking lack of consensus in the obtained results. We studied the decomposition of a mixture of poplar and alder in three terrestrial: aquatic exposures to determine (1) if the effect of mixing litter on mass loss, associated decomposers (fungal biomass, sporulation rates, and richness), and detritivores (abundance, biomass, and richness of invertebrate shredders) differs between the stream (fully aquatic exposure) and when litter is exposed to a period of terrestrial exposure prior to immersion and (2) the effect of the mixture across exposure scenarios. The effect of the mixture was additive on mass loss and synergistic on decomposers and detritivores across exposure scenarios. Within scenarios, mass loss and decomposers showed synergistic effects only in the fully aquatic exposure, detritivores showed synergistic effects only when the period of terrestrial was shorter than the period of aquatic exposure, and when the period of terrestrial was equal to the period of aquatic exposure the effect of the mixture was additive on mass loss, decomposers, and detritivores. The species-specific effects also differed among exposure scenarios. Alder affected poplar only when there was a period of terrestrial exposure, with increased sporulation rates and fungal richness in exposure 25:75, and increased mass loss in exposure 50:50. Poplar affected alder only under fully aquatic exposure, with increased mass loss. In conclusion, the synergistic effects of the mixture changed with a period of terrestrial exposure prior to immersion. These results provide a cross-boundary perspective on the effect of mixing litter, showing a legacy effect of exposure to terrestrial decomposition on the fate of plant litter in aquatic ecosystems and highlighting the importance of also assessing the effect of mixing litter on the associated biota and not only on mass loss.

Microbial community history and leaf species shape bottom-up effects in a freshwater shredding amphipod

Arable land use and the associated application of agrochemicals can affect local freshwater communities with consequences for the entire ecosystem. For instance, the structure and function of leaf-associated microbial communities can be affected by pesticides, such as fungicides. Additionally, the leaf species on which these microbial communities grow reflects another environmental filter for community structure. These factors and their interaction may jointly modify leaves' nutritional quality for higher trophic levels. To test this assumption, we studied the structure of leaf-associated microbial communities with distinct exposure histories (pristine [P] vs vineyard run off [V]) colonising two leaf species (black alder, European beech, and a mixture thereof). By offering these differently colonised leaves as food to males and females of the leaf-shredding amphipod Gammarus fossarum (Crustacea; Amphipoda) we assessed for potential bottom-up effects. The growth rate, feeding rate, faeces production and neutral lipid fatty acid profile of the amphipod served as response variable in a 2 × 3 × 2-factorial test design over 21d. A clear separation of community history (P vs V), leaf species and an interaction between the two factors was observed for the leaf-associated aquatic hyphomycete (i.e., fungal) community. Sensitive fungal species were reduced by up to 70 % in the V- compared to P-community. Gammarus' growth rate, feeding rate and faeces production were affected by the factor leaf species. Growth was negatively affected when Gammarus were fed with beech leaves only, whereas the impact of alder and the mixture of both leaf species was sex-specific. Overall, this study highlights that leaf species identity had a more substantial impact on gammarids relative to the microbial community itself. Furthermore, the sex-specificity of the observed effects (excluding fatty acid profile, which was only measured for male) questions the procedure of earlier studies, that is using either only one sex or not being able to differentiate between males and females. However, these results need additional verification to support a reliable extrapolation.

Functional identity drives tree species richness-induced increases in litterfall production and forest floor mass in young tree communities

Forest floor accumulation is a key process that influences ecosystem carbon cycling. Despite evidence suggesting that tree diversity and soil carbon are positively correlated, most soil carbon studies typically omit the response of the forest floor carbon to tree diversity loss. Here, we evaluated how tree species richness affects forest floor mass and how this effect is mediated by litterfall production and forest floor decay rate in a tree diversity experiment in a subtropical forest. We observed that greater tree species richness leads to higher forest floor accumulation at the soil surface through increasing litterfall production - positively linked to functional trait identity (i.e. community-weighted mean functional trait) rather than functional diversity - and unchanged forest floor decay. Interestingly, structural equation modelling revealed that this lack of overall significant tree species richness effect on forest floor decay rate was due to two indirect and opposite effects cancelling each other out. Indeed, tree species richness increased forest floor decay rate through increasing litterfall production while decreasing forest floor decay rate by increasing litter species richness. Our reports of greater organic matter accumulation in the forest floor in species-rich forests suggest that tree diversity may have long-term and important effect on ecosystem carbon cycling and services.

Contrasting geochemical and fungal controls on decomposition of lignin and soil carbon at continental scale

Lignin is an abundant and complex plant polymer that may limit litter decomposition, yet lignin is sometimes a minor constituent of soil organic carbon (SOC). Accounting for diversity in soil characteristics might reconcile this apparent contradiction. Tracking decomposition of a lignin/litter mixture and SOC across different North American mineral soils using lab and field incubations, here we show that cumulative lignin decomposition varies 18-fold among soils and is strongly correlated with bulk litter decomposition, but not SOC decomposition. Climate legacy predicts decomposition in the lab, and impacts of nitrogen availability are minor compared with geochemical and microbial properties. Lignin decomposition increases with some metals and fungal taxa, whereas SOC decomposition decreases with metals and is weakly related with fungi. Decoupling of lignin and SOC decomposition and their contrasting biogeochemical drivers indicate that lignin is not necessarily a bottleneck for SOC decomposition and can explain variable contributions of lignin to SOC among ecosystems.

Plant litter strengthens positive biodiversity-ecosystem functioning relationships over time

Plant biodiversity-productivity relationships become stronger over time in grasslands, forests, and agroecosystems. Plant shoot and root litter is important in mediating these positive relationships, yet the functional role of plant litter remains overlooked in long-term experiments. We propose that plant litter strengthens biodiversity-ecosystem functioning relationships over time in four ways by providing decomposing detritus that releases nitrogen (N) over time for uptake by existing and succeeding plants, enhancing overall soil fertility, changing soil community composition, and reducing the impact of residue-borne pathogens and pests. We bring new insights into how diversity-productivity relationships may change over time and suggest that the diversification of crop residue retention through increased residue diversity from plant mixtures will improve the sustainability of food production systems.

Temporal dynamics of mixed litter humification in an alpine treeline ecotone

Loss of plant diversity affects mountain ecosystem properties and processes, yet few studies have focused on the impact of plant function type deficiency on mixed litter humification. To fill this knowledge gap, we conducted a 1279-day litterbag decomposition experiment with six plant functional types of foliar litter to determine the temporal dynamic characteristics of mixed litter humification in a coniferous forest (CF) and an alpine shrubland (AS). The results indicated that the humus concentrations, the net accumulations and their relative mixed effects (RME) of most types were higher in CF than those in AS at 146 days, and humus net accumulations fell to approximately -80% of the initial level within 1279 days. The RME of the total humus and humic acid concentrations exhibited a general change from synergistic to antagonistic effects over time, but the mixing of single plant functional type impeded the formation of fulvic acid due to consistently exhibited antagonistic effects. Ultimately, correlation analysis indicated that environmental factors (temperature, snow depth and freeze-thaw cycles) significantly hindered litter humification in the early stage, while some initial quality factors drove this process at a longer scale. Among these aspects, the concentrations of zinc, copper and iron, as well as acid-unhydrolyzable residue (AUR):nitrogen and AUR:phosphorous, stimulated humus accumulation, while water-soluble extractables, potassium, magnesium and aluminium hampered it. Deficiencies in a single plant functional type and vegetation type variations affected litter humification at the alpine treeline, which will further affect soil carbon sequestration, which is of great significance for understanding the material circulation of alpine ecosystems.

Invasive Plants and Species Richness Impact Litter Decomposition in Riparian Zones

Natural ecosystems generally include litter decomposition as part of the natural cycle since the material properties and the environment greatly influence the decomposition rate. The invasion of exotic plants alters the species diversity and growth characteristics of plant communities, but its impact on litter decomposition is unknown in the riparian zone. This study examines how invasive plants affect the early stages of litter decomposition and how species richness impacts them. This experiment involved a random litter mixture of exotic (Alternanthera philoxeroides and Bidens pilosa) and native species in the riparian zone of the Three Gorges Dam Reservoir in China. There were 43 species mixture types, with various species richness ranging from 1 to 6. Litterbags were placed in the hydro-fluctuation zone and terrestrial zone, where they decomposed over the course of 55 days. Invasive plants decompose rapidly compared to native plants (35.71% of the remaining mass of the invasive plant). The invasive plant A. philoxeroides has the potential to accelerate native plant decomposition (0.29 of non-added synergetic effect), but Bidens pilosa cannot. Nonetheless, species richness had little effect on the decomposition rate. These effects are dependent upon differences in chemical functional characteristics among the species. The initial traits of the plants, specifically C, N, and C/N, were significantly and linearly correlated with the loss of mixed litter mass and mixing effect strength (P < 0.01). In addition, submergence decomposition conditions reduce the disturbance of invasive plants and predict decomposition rates based on litter characteristics. Invasive plants can therefore impact the material cycle of an ecosystem. There is a need to examine decomposition time, which may also involve considering other factors.

Tree Diversity, Initial Litter Quality, and Site Conditions Drive Early-Stage Fine-Root Decomposition in European Forests

Decomposition of dead fine roots contributes significantly to nutrient cycling and soil organic matter stabilization. Most knowledge of tree fine-root decomposition stems from studies in monospecific stands or single-species litter, although most forests are mixed. Therefore, we assessed how tree species mixing affects fine-root litter mass loss and which role initial litter quality and environmental factors play. For this purpose, we determined fine-root decomposition of 13 common tree species in four European forest types ranging from boreal to Mediterranean climates. Litter incubations in 315 tree neighborhoods allowed for separating the effects of litter species from environmental influences and litter mixing (direct) from tree diversity (indirect). On average, mass loss of mixed-species litter was higher than those of single-species litter in monospecific neighborhoods. This was mainly attributable to indirect diversity effects, that is, alterations in microenvironmental conditions as a result of tree species mixing, rather than direct diversity effects, that is, litter mixing itself. Tree species mixing effects were relatively weak, and initial litter quality and environmental conditions were more important predictors of fine-root litter mass loss than tree diversity. We showed that tree species mixing can alter fine-root litter mass loss across large environmental gradients, but these effects are context-dependent and of moderate importance compared to environmental influences. Interactions between species identity and site conditions need to be considered to explain diversity effects on fine-root decomposition.

Functional diversity and identity of plant genotypes regulate rhizodeposition and soil microbial activity

Our understanding of the linkages between plant diversity and soil carbon and nutrient cycling is primarily derived from studies at the species level, while the importance and mechanisms of diversity effects at the genotype level are poorly understood. Here we examine how genotypic diversity and identity, and associated variation in functional traits, within a common grass species, Anthoxanthum odoratum, modified rhizodeposition, soil microbial activity and litter decomposition. Root litter quality was not significantly affected by plant genotypic diversity, but decomposition was enhanced in soils with the legacy of higher genotypic diversity. Plant genotypic diversity and identity modified rhizodeposition and associated microbial activity via two independent pathways. Plant genotypic diversity enhanced soil functioning via positive effects on variation in specific leaf area and total rhizodeposition. Genotype identity affected both rhizodeposit quantity and quality, and these effects were mediated by differences in mean specific leaf area, shoot mass and plant height. Rhizodeposition was more strongly predicted by aboveground than belowground traits, suggesting strong linkages between photosynthesis and root exudation. Our study demonstrates that functional diversity and identity of plant genotypes modulates belowground carbon supply and quality, representing an important but overlooked pathway by which biodiversity affects ecosystem functioning.

Urbanisation differently affects decomposition rates of recalcitrant woody material and labile leaf litter

Litter decomposition is a fundamental ecosystem process and service that supplies nutrients to the soil. Although decomposition rate is influenced by litter quality, climatic conditions, the decomposer community and vegetation type in non-urban ecosystems, little is known about the degradation of different organic matter types in urban settings. We investigated the decomposition rates of recalcitrant (wood sticks for 4 years) and labile litter (green tea leaves in pyramid-shaped teabags for 3 years) in urban habitats that differed in level of management and disturbance. We found that recalcitrant woody material decomposed slower in urban habitat types (ca. 60–75% mass loss after 4 years in remnant spruce forests, park lawns, ruderal habitats) than in natural to semi-natural spruce forest soils (84% mass loss) outside the city. Labile tea litter, however, decomposed faster in typical open urban habitats (70% mass loss after 3 years in park lawns, ruderal habitats) than in forested habitats (60% mass loss in semi-natural and remnant spruce forests), with a remarkable dichotomy in decomposition rate between open and forested habitats. We suggest that the slower rate of wood decomposition in the city relates to its depauperate saprotrophic fungal community. The faster rate of labile litter decomposition in open habitats is difficult to explain, but is potentially a consequence of environmental factors that support the activity of bacteria over fungi in open habitats. We propose that the reintroduction of decaying woody material into the urban greenspace milieu could increase biodiversity and also improve the ability of urban soils to decompose an array of organic material entering the system. This reintroduction of decaying woody material could either occur by leaving cut logs – due to management – in urban remnant forests, which has been shown to be accepted as natural features by residents in Fennoscandian cities, and by placing logs in urban parks in ways that communicate their intentional use as part of urban landscape design and management.

Evidence of Constrained Divergence and Conservatism in Climatic Niches of the Temperate Maples (Acer L.)

Research highlights: The availability of global distribution data and new, fossil-calibrated phylogenies has made it possible to compare the climatic niches of the temperate maple (Acer L.) taxa and assess phylogenetic and continental patterns in niche overlap. Background and Objectives: The maples have radiated from East Asia into two other temperate continental bioregions, North America and Eurasia (Europe and West Asia), over a roughly 60-million-year period. During this time, the Earth’s climate experienced pronounced cooling and drying, culminating in cyclic periods of widespread temperate glaciation in the Pliocene to Pleistocene. The objective of this study is to use newly available data to model the climatic niches of 60% of the temperate maples and assess patterns of niche divergence, constraint, and conservatism in the genus’s radiation out of East Asia. Materials and Methods: I assembled global occurrence data and associated climatic information for 71 maple taxa, including all species endemic to temperate North America and Eurasia and their closely related East Asian congeners. I constructed Maxent niche models for all taxa and compared the climatic niches of 184 taxa pairs and assessed phylogenetic signal in key niche axes for each taxon and in niche overlap at the continental and global scale. Results: Maxent models define a fundamental climatic niche for temperate maples and suggest that drought-intolerant taxa have been lost from the Eurasian maple flora, with little continental difference in temperature optima or breadth. Niche axes and niche overlap show minimal evidence of phylogenetic signal, suggesting adaptive evolution. Pairwise niche comparisons reveal infrequent niche overlap continentally and globally, even among sister pairs, with few taxa pairs sharing ecological niche space, providing evidence for constrained divergence within the genus’s fundamental climatic niche. Evidence of niche conservatism is limited to three somewhat geographically isolated regions of high maple diversity (western North America, the Caucasus, and Japan). Conclusions: Over 60 million years of hemispheric radiation on a cooling and drying planet, the maple genus experienced divergent, though constrained, climatic niche evolution. High climatic niche diversity across spatial and phylogenetic scales along with very limited niche overlap or conservatism suggests that the radiation of the genus has largely been one of adaptive diversification.

Litter chemical traits strongly drove the carbon fractions loss during decomposition across an alpine treeline ecotone

The decomposition of litter carbon (C) fraction is a major determinant of soil organic matter pool and nutrient cycling. However, knowledge of litter chemical traits regulate C fractions release is still relatively limited. A litterbag experiment was conducted using six plant functional litter types at two vegetation type (coniferous forest and alpine shrubland) in a treeline ecotone. We evaluated the relative importance of litter chemistry (i.e. Nutrient, C quality, and stoichiometry) on the loss of litter mass, non-polar extractables (NPE), water-soluble extractables (WSE), acid-hydrolyzable carbohydrates (ACID), and acid-unhydrolyzable residue (AUR) during decomposition. Litter nutrients contain nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), sodium (Na), magnesium (Mg), aluminium (Al), manganese (Mn), zinc (Zn), iron (Fe) and copper (Cu), litter C quality contains C, WSE, NPE, ACID, and AUR, and stoichiometry was defined by C:N, C:P; N:P, ACID:N, and AUR:N. The results showed single exponential model fitted decomposition rates of litter mass and C fractions better than double exponential or asymptotic decomposition, and the decomposition rates of C fractions were strongly correlated with initial litter nutrients, especially K, Na, Ca. Furthermore, the temporal dynamics of litter nutrients (Ca, Mg, Na, K, Zn, and Fe) strongly regulated C fractions loss during the decomposition process. Changes in litter C quality had an evident effect on the degradation of ACID and AUR, supporting the concept of "priming effect" of soluble carbon fraction. The significant differences were found in the release of NPE, WSE, and ACID rather than AUR among coniferous forest and alpine shrubland, and the vegetation type effects largely depend on the changes in litter stoichiometry, which is an important implication for the change in plant community abundance regulate decay. Collectively, elucidating the hierarchical drivers of litter chemistry on decomposition is critical to soil C sequestration in alpine ecosystems.