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Quattrone A, Yang Y, Yadav P, Weber KA, Russo SE. Nutrient and Microbiome-Mediated Plant-Soil Feedback in Domesticated and Wild Andropogoneae: Implications for Agroecosystems. Microorganisms 2023; 11:2978. [PMID: 38138123 PMCID: PMC10745641 DOI: 10.3390/microorganisms11122978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Revised: 11/23/2023] [Accepted: 11/28/2023] [Indexed: 12/24/2023] Open
Abstract
Plants influence the abiotic and biotic environment of the rhizosphere, affecting plant performance through plant-soil feedback (PSF). We compared the strength of nutrient and microbe-mediated PSF and its implications for plant performance in domesticated and wild grasses with a fully crossed greenhouse PSF experiment using four inbred maize genotypes (Zea mays ssp. mays b58, B73-wt, B73-rth3, and HP301), teosinte (Z. mays ssp. parviglumis), and two wild prairie grasses (Andropogon gerardii and Tripsacum dactyloides) to condition soils for three feedback species (maize B73-wt, teosinte, Andropogon gerardii). We found evidence of negative PSF based on growth, phenotypic traits, and foliar nutrient concentrations for maize B73-wt, which grew slower in maize-conditioned soil than prairie grass-conditioned soil. In contrast, teosinte and A. gerardii showed few consistent feedback responses. Both rhizobiome and nutrient-mediated mechanisms were implicated in PSF. Based on 16S rRNA gene amplicon sequencing, the rhizosphere bacterial community composition differed significantly after conditioning by prairie grass and maize plants, and the final soil nutrients were significantly influenced by conditioning, more so than by the feedback plants. These results suggest PSF-mediated soil domestication in agricultural settings can develop quickly and reduce crop productivity mediated by PSF involving changes to both the soil rhizobiomes and nutrient availability.
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Affiliation(s)
- Amanda Quattrone
- Complex Biosystems Ph.D. Program, University of Nebraska-Lincoln, Lincoln, NE 68583-0851, USA
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE 68588-0118, USA; (Y.Y.)
- Center for Plant Science Innovation, University of Nebraska-Lincoln, Lincoln, NE 68583-0705, USA
| | - Yuguo Yang
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE 68588-0118, USA; (Y.Y.)
| | - Pooja Yadav
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE 68588-0118, USA; (Y.Y.)
| | - Karrie A. Weber
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE 68588-0118, USA; (Y.Y.)
- Department of Earth and Atmospheric Sciences, University of Nebraska-Lincoln, Lincoln, NE 68588-0340, USA
- Daugherty Water for Food Institute, University of Nebraska, Lincoln, NE 68588-6203, USA
| | - Sabrina E. Russo
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE 68588-0118, USA; (Y.Y.)
- Center for Plant Science Innovation, University of Nebraska-Lincoln, Lincoln, NE 68583-0705, USA
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2
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Wood KEA, Kobe RK, Ibáñez I, McCarthy-Neumann S. Tree seedling functional traits mediate plant-soil feedback survival responses across a gradient of light availability. PLoS One 2023; 18:e0293906. [PMID: 38011125 PMCID: PMC10681222 DOI: 10.1371/journal.pone.0293906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Accepted: 10/21/2023] [Indexed: 11/29/2023] Open
Abstract
1. Though not often examined together, both plant-soil feedbacks (PSFs) and functional traits have important influences on plant community dynamics and could interact. For example, seedling functional traits could impact seedling survivorship responses to soils cultured by conspecific versus heterospecific adults. Furthermore, levels of functional traits could vary with soil culturing source. In addition, these relationships might shift with light availability, which can affect trait values, microbe abundance, and whether mycorrhizal colonization is mutualistic or parasitic to seedlings. 2. To determine the extent to which functional traits mediate PSFs via seedling survival, we conducted a field experiment. We planted seedlings of four temperate tree species across a gradient of light availability and into soil cores collected beneath conspecific (sterilized and live) and heterospecific adults. We monitored seedling survival twice per week over one growing season, and we randomly selected subsets of seedlings to measure mycorrhizal colonization and phenolics, lignin, and NSC levels at three weeks. 3. Though evidence for PSFs was limited, Acer saccharum seedlings exhibited positive PSFs (i.e., higher survival in conspecific than heterospecific soils). In addition, soil microbes had a negative effect on A. saccharum and Prunus serotina seedling survival, with reduced survival in live versus sterilized conspecific soil. In general, we found higher trait values (measured amounts of a given trait) in conspecific than heterospecific soils and higher light availability. Additionally, A. saccharum survival increased with higher levels of phenolics, which were higher in conspecific soils and high light. Quercus alba survival decreased with higher AMF colonization. 4. We demonstrate that functional trait values in seedlings as young as three weeks vary in response to soil source and light availability. Moreover, seedling survivorship was associated with trait values for two species, despite both drought and heavy rainfall during the growing season that may have obscured survivorship-trait relationships. These results suggest that seedling traits could have an important role in mediating the effects of local soil source and light levels on seedling survivorship and thus plant traits could have an important role in PSFs.
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Affiliation(s)
- Katherine E. A. Wood
- Department of Forestry, Michigan State University, East Lansing, Michigan, United States of America
- Program in Ecology, Evolution and Behavior, Michigan State University, East Lansing, Michigan, United States of America
| | - Richard K. Kobe
- Department of Forestry, Michigan State University, East Lansing, Michigan, United States of America
- Program in Ecology, Evolution and Behavior, Michigan State University, East Lansing, Michigan, United States of America
| | - Inés Ibáñez
- School for Environment and Sustainability, University of Michigan, Ann Arbor, Michigan, United States of America
| | - Sarah McCarthy-Neumann
- Department of Forestry, Michigan State University, East Lansing, Michigan, United States of America
- Department of Agricultural and Environmental Sciences, Tennessee State University, Nashville, Tennessee, United States of America
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3
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Aaronson JK, Kulmatiski A, Forero LE, Grenzer J, Norton JM. Are Plant-Soil Feedbacks Caused by Many Weak Microbial Interactions? BIOLOGY 2023; 12:1374. [PMID: 37997973 PMCID: PMC10669423 DOI: 10.3390/biology12111374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Accepted: 10/26/2023] [Indexed: 11/25/2023]
Abstract
We used high-throughput sequencing and multivariate analyses to describe soil microbial community composition in two four-year field plant-soil feedback (PSF) experiments in Minnesota, USA and Jena, Germany. In descending order of variation explained, microbial community composition differed between the two study sites, among years, between bulk and rhizosphere soils, and among rhizosphere soils cultivated by different plant species. To try to identify soil organisms or communities that may cause PSF, we correlated plant growth responses with the microbial community composition associated with different plants. We found that plant biomass was correlated with values on two multivariate axes. These multivariate axes weighted dozens of soil organisms, suggesting that PSF was not caused by individual pathogens or symbionts but instead was caused by 'many weak' plant-microbe interactions. Taken together, the results suggest that PSFs result from complex interactions that occur within the context of a much larger soil microbial community whose composition is determined by factors associated with 'site' or year, such as soil pH, soil type, and weather. The results suggest that PSFs may be highly variable and difficult to reproduce because they result from complex interactions that occur in the context of a larger soil microbial community.
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Affiliation(s)
- Julia K. Aaronson
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Andrew Kulmatiski
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Leslie E. Forero
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Josephine Grenzer
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Jeanette M. Norton
- Plants, Soils and Climate Department and the Ecology Center, Utah State University, Logan, UT 84322, USA;
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4
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Xi N, McCarthy-Neumann S, Feng J, Wu H, Wang W, Semchenko M. Light availability and plant shade tolerance modify plant-microbial interactions and feedbacks in subtropical trees. THE NEW PHYTOLOGIST 2023; 238:393-404. [PMID: 36647239 DOI: 10.1111/nph.18737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Accepted: 01/08/2023] [Indexed: 06/17/2023]
Abstract
Plant-soil feedbacks (PSFs) are an important mechanism of species coexistence in forest communities. However, evidence remains limited for how light availability regulates PSFs in species with different shade tolerance via changes in plant-microbial interactions. Here we tested in a glasshouse experiment how PSFs changed as a function of light availability and tree shade tolerance. Soil bacterial and fungal communities were profiled using the 16S rRNA and ITS2 gene sequencing, respectively. Under low light, individual PSFs were positively related to shade tolerance, while the least shade-tolerant species produced the most positive PSFs under high light. Pairwise PSFs between species with contrasting shade tolerance were strongly positive under high light but negative under low light, thereby promoting the dominance of less shade-tolerant species in forest gaps and species coexistence under closed canopy, respectively. Under high light, PSFs were related to soil microbial composition and diversity, with the relative abundance of arbuscular mycorrhizal fungi being the primary driver of PSFs. Under low light, none of soil microbial properties were significantly related to PSFs. These findings indicate PSFs and plant shade tolerance interact to promote species coexistence and improve our understanding of how soil microbes contribute to variation in PSFs.
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Affiliation(s)
- Nianxun Xi
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, College of Forestry, Hainan University, Haikou, 570228, China
- State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, China
| | - Sarah McCarthy-Neumann
- Department of Forestry, Michigan State University, East Lansing, MI, 48824, USA
- Department of Agricultural and Environmental Sciences, Tennessee State University, Nashville, TN, 37209, USA
| | - Jiayi Feng
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, and Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Xingke Road 723, Guangzhou, 510650, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Haibin Road 1119, Nansha, Guangzhou, 511458, China
| | - Hangyu Wu
- State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, China
| | - Weitao Wang
- State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, China
| | - Marina Semchenko
- Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, 51005, Tartu, Estonia
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5
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Wang XY, Gao S, Chen T, Wang J, Yu FH. Interactions between soil microbes and native species drive a diversity-invasibility relationship. Biol Invasions 2022. [DOI: 10.1007/s10530-022-02988-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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6
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Li H, Zhao HM, Purchase D, Chen XW. Editorial: Microbial communities and functions contribute to plant performance under various stresses. Front Microbiol 2022; 13:992909. [DOI: 10.3389/fmicb.2022.992909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Accepted: 10/25/2022] [Indexed: 11/09/2022] Open
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Liu Y, Zheng Y, Jahn LV, Burns JH. Invaders responded more positively to soil biota than native or noninvasive introduced species, consistent with enemy escape. Biol Invasions 2022. [DOI: 10.1007/s10530-022-02919-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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8
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Forero LE, Kulmatiski A, Grenzer J, Norton J. Plant–soil feedbacks help explain plant community productivity. Ecology 2022; 103:e3736. [DOI: 10.1002/ecy.3736] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Revised: 01/28/2022] [Accepted: 03/07/2022] [Indexed: 11/09/2022]
Affiliation(s)
- Leslie E. Forero
- Department of Wildland Resources and the Ecology Center Utah State University 5230 Old Main Hill Logan UT USA
| | - Andrew Kulmatiski
- Department of Wildland Resources and the Ecology Center Utah State University 5230 Old Main Hill Logan UT USA
| | - Josephine Grenzer
- Department of Wildland Resources and the Ecology Center Utah State University 5230 Old Main Hill Logan UT USA
| | - Jeanette Norton
- Department of Plants, Soils, and Climate Utah State University 4280 Old Main Hill Logan UT USA
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9
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Affiliation(s)
- Kurt O. Reinhart
- United States Department of Agriculture‐Agricultural Research Service Fort Keogh Livestock & Range Research Laboratory Miles City MT USA
| | | | - Matthew J. Rinella
- United States Department of Agriculture‐Agricultural Research Service Fort Keogh Livestock & Range Research Laboratory Miles City MT USA
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10
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Abbott KC, Eppinga MB, Umbanhowar J, Baudena M, Bever JD. Microbiome influence on host community dynamics: Conceptual integration of microbiome feedback with classical host-microbe theory. Ecol Lett 2021; 24:2796-2811. [PMID: 34608730 PMCID: PMC9292004 DOI: 10.1111/ele.13891] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Revised: 07/28/2021] [Accepted: 08/31/2021] [Indexed: 01/11/2023]
Abstract
Microbiomes have profound effects on host fitness, yet we struggle to understand the implications for host ecology. Microbiome influence on host ecology has been investigated using two independent frameworks. Classical ecological theory powerfully represents mechanistic interactions predicting environmental dependence of microbiome effects on host ecology, but these models are notoriously difficult to evaluate empirically. Alternatively, host-microbiome feedback theory represents impacts of microbiome dynamics on host fitness as simple net effects that are easily amenable to experimental evaluation. The feedback framework enabled rapid progress in understanding microbiomes' impacts on plant ecology, and can also be applied to animal hosts. We conceptually integrate these two frameworks by deriving expressions for net feedback in terms of mechanistic model parameters. This generates a precise mapping between net feedback theory and classic population modelling, thereby merging mechanistic understanding with experimental tractability, a necessary step for building a predictive understanding of microbiome influence on host ecology.
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Affiliation(s)
| | - Maarten B Eppinga
- University of Zurich, Zurich, Switzerland.,Copernicus Institute of Sustainable Development, Utrecht University, Utrecht, The Netherlands
| | | | - Mara Baudena
- Copernicus Institute of Sustainable Development, Utrecht University, Utrecht, The Netherlands.,National Research Council of Italy, Institute of Atmospheric Sciences, and Climate (CNR-ISAC), Torino, Italy
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11
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Grenzer J, Kulmatiski A, Forero L, Ebeling A, Eisenhauer N, Norton J. Moderate plant-soil feedbacks have small effects on the biodiversity-productivity relationship: A field experiment. Ecol Evol 2021; 11:11651-11663. [PMID: 34522331 PMCID: PMC8427583 DOI: 10.1002/ece3.7819] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 05/27/2021] [Accepted: 06/06/2021] [Indexed: 01/22/2023] Open
Abstract
Plant-soil feedback (PSF) has gained attention as a mechanism promoting plant growth and coexistence. However, most PSF research has measured monoculture growth in greenhouse conditions. Translating PSFs into effects on plant growth in field communities remains an important frontier for PSF research. Using a 4-year, factorial field experiment in Jena, Germany, we measured the growth of nine grassland species on soils conditioned by each of the target species (i.e., 72 PSFs). Plant community models were parameterized with or without these PSF effects, and model predictions were compared to plant biomass production in diversity-productivity experiments. Plants created soils that changed subsequent plant biomass by 40%. However, because they were both positive and negative, the average PSF effect was 14% less growth on "home" than on "away" soils. Nine-species plant communities produced 29 to 37% more biomass for polycultures than for monocultures due primarily to selection effects. With or without PSF, plant community models predicted 28%-29% more biomass for polycultures than for monocultures, again due primarily to selection effects. Synthesis: Despite causing 40% changes in plant biomass, PSFs had little effect on model predictions of plant community biomass across a range of species richness. While somewhat surprising, a lack of a PSF effect was appropriate in this site because species richness effects in this study were caused by selection effects and not complementarity effects (PSFs are a complementarity mechanism). Our plant community models helped us describe several reasons that even large PSF may not affect plant productivity. Notably, we found that dominant species demonstrated small PSF, suggesting there may be selective pressure for plants to create neutral PSF. Broadly, testing PSFs in plant communities in field conditions provided a more realistic understanding of how PSFs affect plant growth in communities in the context of other species traits.
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Affiliation(s)
- Josephine Grenzer
- Department of Wildland Resources and the Ecology CenterUtah State UniversityLoganUTUSA
| | - Andrew Kulmatiski
- Department of Wildland Resources and the Ecology CenterUtah State UniversityLoganUTUSA
| | - Leslie Forero
- Department of Wildland Resources and the Ecology CenterUtah State UniversityLoganUTUSA
| | - Anne Ebeling
- Institute of Ecology and EvolutionUniversity of JenaJenaGermany
| | - Nico Eisenhauer
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐LeipzigLeipzigGermany
- Institute of BiologyUniversity of LeipzigLeipzigGermany
| | - Jeanette Norton
- Department of Plant, Soils and ClimateUtah State UniversityLoganUTUSA
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12
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Allen WJ, Sapsford SJ, Dickie IA. Soil sample pooling generates no consistent inference bias: a meta-analysis of 71 plant-soil feedback experiments. THE NEW PHYTOLOGIST 2021; 231:1308-1315. [PMID: 33982798 DOI: 10.1111/nph.17455] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Accepted: 05/03/2021] [Indexed: 06/12/2023]
Abstract
There is current debate on how soil sample pooling affects the measurement of plant-soil feedbacks. Several studies have suggested that pooling soil samples among experimental units reduces variance and can bias estimates of plant-soil feedbacks. However, it is unclear whether pooling has resulted in systematic mismeasurement of plant-soil feedbacks in the literature. Using data from 71 experiments, we tested whether pairwise plant-soil feedback direction, magnitude and variance differed among soil pooling treatments. We also tested whether pooling has altered our understanding of abiotic and biotic drivers that influence pairwise plant-soil feedbacks. Pooling of soil samples among experimental units was used in 42% of examined experiments. Contrary to predictions, pooling did not affect mean pairwise plant-soil feedback effect size or within-experiment variance. Accounting for soil sample pooling also did not significantly alter our understanding of the drivers of pairwise plant-soil feedbacks. We conclude that there is no evidence that soil sample pooling systematically biases estimates of plant-soil feedback direction, magnitude, variance or drivers across many studies. Given the debate of whether to pool soil samples, researchers should be aware of potential criticisms and carefully consider how experimental design and soil pooling methods influence interpretation of experiments.
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Affiliation(s)
- Warwick J Allen
- Bio-Protection Research Centre, School of Biological Sciences, University of Canterbury, Christchurch, 8140, New Zealand
| | - Sarah J Sapsford
- School of Biological Sciences, University of Canterbury, Christchurch, 8140, New Zealand
| | - Ian A Dickie
- Bio-Protection Research Centre, School of Biological Sciences, University of Canterbury, Christchurch, 8140, New Zealand
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13
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Ke PJ, Zee PC, Fukami T. Dynamic plant-soil microbe interactions: the neglected effect of soil conditioning time. THE NEW PHYTOLOGIST 2021; 231:1546-1558. [PMID: 34105771 DOI: 10.1111/nph.17420] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2020] [Accepted: 04/12/2021] [Indexed: 06/12/2023]
Abstract
Plant-soil feedback (PSF) may change in strength over the life of plant individuals as plants continue to modify the soil microbial community. However, the temporal variation in PSF is rarely quantified and its impacts on plant communities remain unknown. Using a chronosequence reconstructed from annual aerial photographs of a coastal dune ecosystem, we characterized > 20-yr changes in soil microbial communities associated with individuals of the four dominant perennial species, one legume and three nonlegume. We also quantified the effects of soil biota on conspecific and heterospecific seedling performance in a glasshouse experiment that preserved soil properties of these individual plants. Additionally, we used a general individual-based model to explore the potential consequences of temporally varying PSF on plant community assembly. In all plant species, microbial communities changed with plant age. However, responses of plants to the turnover in microbial composition depended on the identity of the seedling species: only the soil biota effect experienced by the nonlegume species became increasingly negative with longer soil conditioning. Model simulation suggested that temporal changes in PSF could affect the transient dynamics of plant community assembly. These results suggest that temporal variation in PSF over the life of individual plants should be considered to understand how PSF structures plant communities.
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Affiliation(s)
- Po-Ju Ke
- Department of Biology, Stanford University, Stanford, CA, 94305, USA
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ, 08544, USA
| | - Peter C Zee
- Department of Biology, University of Mississippi, University, MS, 38677, USA
| | - Tadashi Fukami
- Department of Biology, Stanford University, Stanford, CA, 94305, USA
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14
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Forero LE, Kulmatiski A, Grenzer J, Norton JM. Plant-soil feedbacks help explain biodiversity-productivity relationships. Commun Biol 2021; 4:789. [PMID: 34172839 PMCID: PMC8233354 DOI: 10.1038/s42003-021-02329-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Accepted: 06/09/2021] [Indexed: 01/18/2023] Open
Abstract
Species-rich plant communities can produce twice as much aboveground biomass as monocultures, but the mechanisms remain unresolved. We tested whether plant-soil feedbacks (PSFs) can help explain these biodiversity-productivity relationships. Using a 16-species, factorial field experiment we found that plants created soils that changed subsequent plant growth by 27% and that this effect increased over time. When incorporated into simulation models, these PSFs improved predictions of plant community growth and explained 14% of overyielding. Here we show quantitative, field-based evidence that diversity maintains productivity by suppressing plant disease. Though this effect alone was modest, it helps constrain the role of factors, such as niche partitioning, that have been difficult to quantify. This improved understanding of biodiversity-productivity relationships has implications for agriculture, biofuel production and conservation.
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Affiliation(s)
- Leslie E Forero
- Department of Wildland Resources and the Ecology Center, Utah State University, Logan, UT, USA
| | - Andrew Kulmatiski
- Department of Wildland Resources and the Ecology Center, Utah State University, Logan, UT, USA.
| | - Josephine Grenzer
- Department of Wildland Resources and the Ecology Center, Utah State University, Logan, UT, USA
| | - Jeanette M Norton
- Department of Plants, Soils and Climate, Utah State University, Logan, UT, USA
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15
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Reinhart KO, Bauer JT, McCarthy‐Neumann S, MacDougall AS, Hierro JL, Chiuffo MC, Mangan SA, Heinze J, Bergmann J, Joshi J, Duncan RP, Diez JM, Kardol P, Rutten G, Fischer M, van der Putten WH, Bezemer TM, Klironomos J. Globally, plant-soil feedbacks are weak predictors of plant abundance. Ecol Evol 2021; 11:1756-1768. [PMID: 33614002 PMCID: PMC7882948 DOI: 10.1002/ece3.7167] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Revised: 12/02/2020] [Accepted: 12/11/2020] [Indexed: 01/19/2023] Open
Abstract
Plant-soil feedbacks (PSFs) have been shown to strongly affect plant performance under controlled conditions, and PSFs are thought to have far reaching consequences for plant population dynamics and the structuring of plant communities. However, thus far the relationship between PSF and plant species abundance in the field is not consistent. Here, we synthesize PSF experiments from tropical forests to semiarid grasslands, and test for a positive relationship between plant abundance in the field and PSFs estimated from controlled bioassays. We meta-analyzed results from 22 PSF experiments and found an overall positive correlation (0.12 ≤ r ¯ ≤ 0.32) between plant abundance in the field and PSFs across plant functional types (herbaceous and woody plants) but also variation by plant functional type. Thus, our analysis provides quantitative support that plant abundance has a general albeit weak positive relationship with PSFs across ecosystems. Overall, our results suggest that harmful soil biota tend to accumulate around and disproportionately impact species that are rare. However, data for the herbaceous species, which are most common in the literature, had no significant abundance-PSFs relationship. Therefore, we conclude that further work is needed within and across biomes, succession stages and plant types, both under controlled and field conditions, while separating PSF effects from other drivers (e.g., herbivory, competition, disturbance) of plant abundance to tease apart the role of soil biota in causing patterns of plant rarity versus commonness.
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Affiliation(s)
- Kurt O. Reinhart
- Fort Keogh Livestock & Range Research LaboratoryUnited States Department of Agriculture‐ Agricultural Research ServiceMiles CityMTUSA
| | - Jonathan T. Bauer
- Department of BiologyInstitute for the Environment and SustainabilityMiami UniversityOxfordOHUSA
| | | | | | - José L. Hierro
- Laboratorio de EcologíaBiogeografía y Evolución Vegetal (LEByEV)Instituto de Ciencias de la Tierra y Ambientales de La Pampa (INCITAP)Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)‐Universidad Nacional de La Pampa (UNLPam)Santa RosaArgentina
- Departamento de BiologíaFacultad de Ciencias Exactas y NaturalesUNLPamSanta RosaArgentina
| | - Mariana C. Chiuffo
- Grupo de Ecología de InvasionesINIBIOMAUniversidad Nacional del ComahueCONICETSan Carlos de BarilocheArgentina
| | - Scott A. Mangan
- Department of Biological SciencesArkansas State UniversityJonesboroARUSA
| | - Johannes Heinze
- Institute of Biochemistry and BiologyUniversity of PotsdamPotsdamGermany
- Berlin‐Brandenburg Institute of Advanced Biodiversity Research (BBIB)BerlinGermany
| | - Joana Bergmann
- Berlin‐Brandenburg Institute of Advanced Biodiversity Research (BBIB)BerlinGermany
- Leibniz Centre for Agricultural Landscape Research (ZALF)MünchebergGermany
- Institut für BiologiePlant EcologyFreie Universität BerlinBerlinGermany
| | - Jasmin Joshi
- Berlin‐Brandenburg Institute of Advanced Biodiversity Research (BBIB)BerlinGermany
- Institute for Landscape and Open SpaceEastern Switzerland University of Applied SciencesSt. GallenSwitzerland
| | - Richard P. Duncan
- Centre for Conservation Ecology and GeneticsInstitute for Applied EcologyUniversity of CanberraCanberraACTAustralia
| | - Jeff M. Diez
- Institute of Ecology and EvolutionUniversity of OregonEugeneORUSA
| | - Paul Kardol
- Department of Forest Ecology and ManagementSwedish University of Agricultural SciencesUmeåSweden
| | - Gemma Rutten
- Institute of Plant ScienceUniversity of BernBernSwitzerland
- Laboratoire d'Ecologie Alpine (LECA)Université Grenoble AlpesUMR CNRS‐UGA‐USMB 5553GrenobleFrance
| | - Markus Fischer
- Institute of Plant ScienceUniversity of BernBernSwitzerland
| | - Wim H. van der Putten
- Department of Terrestrial EcologyNetherlands Institute of EcologyWageningenThe Netherlands
- Laboratory of NematologyWageningen UniversityWageningenThe Netherlands
| | - Thiemo Martijn Bezemer
- Department of Terrestrial EcologyNetherlands Institute of EcologyWageningenThe Netherlands
- Institute of BiologySection Plant Ecology and PhytochemistryLeiden UniversityLeidenThe Netherlands
| | - John Klironomos
- Department of BiologyUniversity of British ColumbiaKelownaBCCanada
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16
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Jevon FV, Record S, Grady J, Lang AK, Orwig DA, Ayres MP, Matthes JH. Seedling survival declines with increasing conspecific density in a common temperate tree. Ecosphere 2020. [DOI: 10.1002/ecs2.3292] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Fiona V. Jevon
- Department of Biological Sciences Dartmouth College Hanover New Hampshire03755USA
| | - Sydne Record
- Department of Biology Bryn Mawr College Bryn Mawr Pennsylvania19010USA
| | - John Grady
- National Great Rivers Research and Education Center East Alton Illinois62024USA
| | - Ashley K. Lang
- Department of Biological Sciences Dartmouth College Hanover New Hampshire03755USA
| | - David A. Orwig
- Harvard ForestHarvard University Petersham Massachusetts01366USA
| | - Matthew P. Ayres
- Department of Biological Sciences Dartmouth College Hanover New Hampshire03755USA
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17
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Zhang Z, Liu Y, Brunel C, van Kleunen M. Evidence for Elton's diversity-invasibility hypothesis from belowground. Ecology 2020; 101:e03187. [PMID: 32893873 DOI: 10.1002/ecy.3187] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/23/2019] [Revised: 06/26/2020] [Accepted: 07/14/2020] [Indexed: 01/04/2023]
Abstract
Sixty year ago, Charles Elton posed that species-rich communities should be more resistant to biological invasion. Still, little is known about which processes could drive the diversity-invasibility relationship. Here we examined whether soil-microbe-mediated apparent competition on alien invaders is more negative when the soil originates from multiple native species. We trained soils with five individually grown native species and used amplicon sequencing to analyze the resulting bacterial and fungal soil communities. We mixed the soils to create trained soils from one, two or four native species. We then grew four alien species separately on these differently trained soils. In the soil-conditioning phase, the five native species built species-specific bacterial and fungal communities in their rhizospheres. In the test phase, it did not matter for biomass of alien plants whether the soil had been trained by one or two native species. However, the alien species achieved 11.7% (95% CI: 3.7-20.1%) less aboveground biomass when grown on soils trained by four native species than on soils trained by two native species. Our results revealed soil-microbes-mediated apparent competition as a mechanism underlying the negative relationship between diversity and invasibility.
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Affiliation(s)
- Zhijie Zhang
- Ecology, Department of Biology, University of Konstanz, Konstanz, 78464, Germany
| | - Yanjie Liu
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy Sciences, Changchun, 130102, China
| | - Caroline Brunel
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China.,IRD, IPME, 911 Avenue Agropolis, BP 64501, Montpellier, 34394, France
| | - Mark van Kleunen
- Ecology, Department of Biology, University of Konstanz, Konstanz, 78464, Germany.,Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China
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18
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Zhang Z, Liu Y, Brunel C, van Kleunen M. Soil-microorganism-mediated invasional meltdown in plants. Nat Ecol Evol 2020; 4:1612-1621. [DOI: 10.1038/s41559-020-01311-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2020] [Accepted: 08/25/2020] [Indexed: 12/16/2022]
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19
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von Holle B, Weber SE, Nickerson DM. The influence of warming and biotic interactions on the potential for range expansion of native and nonnative species. AOB PLANTS 2020; 12:plaa040. [PMID: 32968475 PMCID: PMC7494242 DOI: 10.1093/aobpla/plaa040] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 08/07/2020] [Indexed: 06/11/2023]
Abstract
Plant species ranges are expected to shift in response to climate change, however, it is unclear how species interactions will affect range shifts. Because of the potential for enemy release of invasive nonnative plant species from species-specific soil pathogens, invasive plants may be able to shift ranges more readily than native plant species. Additionally, changing climatic conditions may alter soil microbial functioning, affecting plant-microbe interactions. We evaluated the effects of site, plant-soil microbe interactions, altered climate, and their interactions on the growth and germination of three congeneric shrub species, two native to southern and central Florida (Eugenia foetida and E. axillaris), and one nonnative invasive from south America (E. uniflora). We measured germination and biomass for these plant species in growth chambers grown under live and sterile soils from two sites within their current range, and one site in their expected range, simulating current (2010) and predicted future (2050) spring growing season temperatures in the new range. Soil microbes (microscopic bacteria, fungi, viruses and other organisms) had a net negative effect on the invasive plant, E. uniflora, across all sites and temperature treatments. This negative response to soil microbes suggests that E. uniflora's invasive success and potential for range expansion are due to other contributing factors, e.g. higher germination and growth relative to native Eugenia. The effect of soil microbes on the native species depended on the geographic provenance of the microbes, and this may influence range expansion of these native species.
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Affiliation(s)
- Betsy von Holle
- Department of Biology, University of Central Florida, and Division of Environmental Biology, National Science Foundation, 2415 Eisenhower Avenue Alexandria, VA, USA
| | - Sören E Weber
- Institut für Evolutionsbiologie und Umweltwissenschaften, University of Zurich, Winterthurerstrasse 190, Zürich, Switzerland
| | - David M Nickerson
- Department of Statistics, University of Central Florida, 4000 Central Florida Blvd, Orlando, FL, USA
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20
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Wei W, Zhu P, Chen P, Huang Q, Bai X, Ni G, Hou Y. Mixed evidence for plant-soil feedbacks in forest invasions. Oecologia 2020; 193:665-676. [PMID: 32642792 DOI: 10.1007/s00442-020-04703-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2019] [Accepted: 07/02/2020] [Indexed: 01/28/2023]
Abstract
Plant-soil feedbacks (PSFs) are plant-mediated changes to soil properties that ultimately influence plant performance, and can, thus, determine plant diversity, succession, and invasion. We hypothesized that PSFs influence invasion processes and that PSF mechanisms are largely driven by changes in soil properties produced by specific plant species. To test these hypotheses, we studied the effects of different soils collected from under common plant species on the growth of the invasive plant Phytolacca americana. We found that PSFs may interfere with invasion resistance because P. americana seedlings showed reduced growth (lower biomass) in soils collected from underneath some native species compared with soils collected from underneath P. americana and two non-native plants. We then selected eight co-occurring native and non-native plant species, and examined PSF dynamics and mechanisms in a pairwise conditioned soil greenhouse experiment. Plant species-specific conditioning effects regarding soil nutrients and enzyme activities were observed. Phytolacca americana had a high ability to use soil N, which may be related to its high invasion ability. Soil P was significantly lower in Quercus acutissima-conditioned soil, indicating that low P availability in Q. acutissima forests may enhance resistance to plant invasion. However, surprisingly, some native plants did not produce PSF effects that decreased the relative performance of invasive plants, nor did the invasive plants produce PSF effects that increased their own performance. We speculate that these PSF findings from greenhouse experiments cannot be extrapolated to field conditions because the litter and allelochemicals of some plants may be important for invasion resistance.
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Affiliation(s)
- Wei Wei
- School of Life Sciences, Ludong University, Yantai, 264025, China
| | - Ping Zhu
- School of Life Sciences, Ludong University, Yantai, 264025, China
| | - Pengdong Chen
- School of Life Sciences, Ludong University, Yantai, 264025, China
| | - Qiaoqiao Huang
- Key Laboratory of Integrated Pest Management on Tropical Crops, Ministry of Agriculture and Rural Affairs, Environment and Plant Protection Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, China
| | - Xinfu Bai
- School of Life Sciences, Ludong University, Yantai, 264025, China
| | - Guangyan Ni
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China
| | - Yuping Hou
- School of Life Sciences, Ludong University, Yantai, 264025, China.
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21
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Crawford KM, Busch MH, Locke H, Luecke NC. Native soil microbial amendments generate trade‐offs in plant productivity, diversity, and soil stability in coastal dune restorations. Restor Ecol 2020. [DOI: 10.1111/rec.13073] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Kerri M. Crawford
- Department of Biology and BiochemistryUniversity of Houston Houston TX 77204 U.S.A
| | - Michelle H. Busch
- Department of Biology and BiochemistryUniversity of Houston Houston TX 77204 U.S.A
| | - Hannah Locke
- Department of Biology and BiochemistryUniversity of Houston Houston TX 77204 U.S.A
| | - Noah C. Luecke
- Department of Biology and BiochemistryUniversity of Houston Houston TX 77204 U.S.A
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22
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Peacher MD, Meiners SJ. Inoculum handling alters the strength and direction of plant-microbe interactions. Ecology 2020; 101:e02994. [PMID: 31997305 DOI: 10.1002/ecy.2994] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Revised: 12/20/2019] [Accepted: 01/22/2020] [Indexed: 11/11/2022]
Abstract
The pooling of soil samples in plant-microbe interaction studies is commonly employed, but the impact of sample handling has rarely been explored experimentally. Concerns have been raised that sample pooling may reduce biological variation leading to inflated type I errors or may alter the magnitude of microbial effects observed, invalidating the results achieved. To assess the impact of inocula pooling on plant-microbe interactions, we examined the reciprocal influence of unpooled and pooled soil microbial inocula on growth of Solidago altissima and Schizachyrium scoparium, with and without inoculum sterilization. Soil pooling had no effect on the variance among replicates in either plant species. However, pooling dramatically altered the magnitude and direction of microbial impacts on plant performance. Pooling of Solidago altissima soil increased the antagonistic effects on growth of both target species. In contrast, pooling of Schizachyrium scoparium soil shifted impacts on Solidago altissima from effectively neutral to slightly positive. Pooling in this system altered both the strength and direction of plant-microbe interactions relative to unpooled soils. Therefore soil mixing should be avoided when the research goal is to determine naturally occurring interaction strengths, even within a single habitat.
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Affiliation(s)
- Madison D Peacher
- Department of Biological Sciences, Eastern Illinois University, Charleston, Illinois, 61920, USA
| | - Scott J Meiners
- Department of Biological Sciences, Eastern Illinois University, Charleston, Illinois, 61920, USA
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23
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Lance AC, Carrino-Kyker SR, Burke DJ, Burns JH. Individual Plant-Soil Feedback Effects Influence Tree Growth and Rhizosphere Fungal Communities in a Temperate Forest Restoration Experiment. Front Ecol Evol 2020. [DOI: 10.3389/fevo.2019.00500] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
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24
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Lynn JS, Duarte DA, Rudgers JA. Soil microbes that may accompany climate warming increase alpine plant production. Oecologia 2019; 191:493-504. [PMID: 31571041 DOI: 10.1007/s00442-019-04518-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Accepted: 09/21/2019] [Indexed: 12/20/2022]
Abstract
Climate change is causing species with non-overlapping ranges to come in contact, and a key challenge is to predict the consequences of such species re-shuffling. Experiments on plants have focused largely on novel competitive interactions; other species interactions, such as plant-microbe symbioses, while less studied, may also influence plant responses to climate change. In this greenhouse study, we evaluated interactions between soil microbes and alpine-restricted plant species, simulating a warming scenario in which low-elevation microbes migrate upslope into the distribution of alpine plants. We examined three alpine grasses from the Rocky Mountains, CO, USA (Poa alpina, Festuca brachyphylla, and Elymus scribneri). We used soil inocula from within (resident) or below (novel) the plants' current elevation range and examined responses in plant biomass, plant traits, and fungal colonization of roots. Resident soil inocula from the species' home range decreased biomass to a greater extent than novel soil inocula. The depressed growth in resident soils suggested that these soils harbor more carbon-demanding microbes, as plant biomass generally declined with greater fungal colonization of roots, especially in resident soil inocula. Although plant traits did not respond to the provenance of soil inocula, specific leaf area declined and root:shoot ratio increased when soil inocula were sterilized, indicating microbial mediation of plant trait expression. Contrary to current predictions, our findings suggest that if upwardly migrating microbes were to displace current soil microbes, alpine plants may benefit from this warming-induced microbial re-shuffling.
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Affiliation(s)
- Joshua S Lynn
- Department of Biology, University of New Mexico, Albuquerque, NM, 87131, USA. .,The Rocky Mountain Biological Laboratory, Gothic, CO, 81224, USA. .,Department of Biological Science, University of Bergen, 5006, Bergen, Norway.
| | - Danielle A Duarte
- Department of Biology, University of New Mexico, Albuquerque, NM, 87131, USA
| | - Jennifer A Rudgers
- Department of Biology, University of New Mexico, Albuquerque, NM, 87131, USA.,The Rocky Mountain Biological Laboratory, Gothic, CO, 81224, USA
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25
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Liang M, Liu X, Parker IM, Johnson D, Zheng Y, Luo S, Gilbert GS, Yu S. Soil microbes drive phylogenetic diversity-productivity relationships in a subtropical forest. SCIENCE ADVANCES 2019; 5:eaax5088. [PMID: 31681847 PMCID: PMC6810308 DOI: 10.1126/sciadv.aax5088] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2019] [Accepted: 09/26/2019] [Indexed: 05/04/2023]
Abstract
The relationship between plant diversity and productivity and the mechanisms underpinning that relationship remain poorly resolved in species-rich forests. We combined extensive field observations and experimental manipulations in a subtropical forest to test how species richness (SR) and phylogenetic diversity (PD) interact with putative root-associated pathogens and how these interactions mediate diversity-productivity relationships. We show that (i) both SR and PD were positively correlated with biomass for both adult trees and seedlings across multiple spatial scales, but productivity was best predicted by PD; (ii) significant positive relationships between PD and productivity were observed in nonsterile soil only; and (iii) root fungal diversity was positively correlated with plant PD and SR, while the relative abundance of putative pathogens was negatively related to plant PD. Our findings highlight the key role of soil pathogenic fungi in tree diversity-productivity relationships and suggest that increasing PD may counteract negative effects of plant-soil feedback.
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Affiliation(s)
- Minxia Liang
- Department of Ecology, School of Life Sciences, State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou 510275, China
| | - Xubing Liu
- Department of Ecology, School of Life Sciences, State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou 510275, China
| | - Ingrid M. Parker
- Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95064, USA
- Smithsonian Tropical Research Institute, Apartado 0843 Balboa, Panama
| | - David Johnson
- School of Earth and Environmental Sciences, The University of Manchester, Manchester M13 9PT, UK
| | - Yi Zheng
- Department of Ecology, School of Life Sciences, State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou 510275, China
| | - Shan Luo
- Department of Ecology, School of Life Sciences, State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou 510275, China
| | - Gregory S. Gilbert
- Smithsonian Tropical Research Institute, Apartado 0843 Balboa, Panama
- Department of Environmental Studies, University of California Santa Cruz, Santa Cruz, CA 95064, USA
| | - Shixiao Yu
- Department of Ecology, School of Life Sciences, State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou 510275, China
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26
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Rinella MJ, Reinhart KO. Toward more robust plant–soil feedback research: reply. Ecology 2019; 100:e02810. [DOI: 10.1002/ecy.2810] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/20/2019] [Accepted: 05/17/2019] [Indexed: 11/10/2022]
Affiliation(s)
- Matthew J. Rinella
- Fort Keogh Livestock and Range Research Laboratory U.S. Department of Agriculture Agricultural Research Service 243 Fort Keogh Road Miles City Montana 59301 USA
| | - Kurt O. Reinhart
- Fort Keogh Livestock and Range Research Laboratory U.S. Department of Agriculture Agricultural Research Service 243 Fort Keogh Road Miles City Montana 59301 USA
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27
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Snyder AE, Harmon-Threatt AN. Reduced water-availability lowers the strength of negative plant–soil feedbacks of two Asclepias species. Oecologia 2019; 190:425-432. [DOI: 10.1007/s00442-019-04419-8] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2018] [Accepted: 05/08/2019] [Indexed: 11/29/2022]
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28
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Bennett JA, Klironomos J. Mechanisms of plant-soil feedback: interactions among biotic and abiotic drivers. THE NEW PHYTOLOGIST 2019; 222:91-96. [PMID: 30451287 DOI: 10.1111/nph.15603] [Citation(s) in RCA: 108] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2018] [Accepted: 11/05/2018] [Indexed: 05/22/2023]
Abstract
Contents Summary 91 I. Introduction 91 II. Primary PSF mechanisms 91 III. Factors mediating the mechanisms of PSF 93 IV. Conclusions and future directions 94 Acknowledgements 95 Author contributions 95 References 95 SUMMARY: Plant-soil feedback (PSF) occurs when plants alter soil properties that influence the performance of seedlings, with consequent effects on plant populations and communities. Many processes influence PSF, including changes in nutrient availability and the accumulation of natural enemies, mutualists or secondary chemicals. Typically, these mechanisms are investigated in isolation, yet no single mechanism is likely to be completely responsible for PSF as these processes can interact. Further, the outcome depends on which resources are limiting and the other plants and soil biota in the surrounding environment. As such, understanding the mechanisms of PSF and their role within plant communities requires quantification of the interactions among the processes influencing PSF and the associated abiotic and biotic contexts.
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Affiliation(s)
- Jonathan A Bennett
- Department of Plant Sciences, University of Saskatchewan, Saskatoon, SK, S7N 5A8, Canada
| | - John Klironomos
- Department of Biology, University of British Columbia, Okanagan Campus, Kelowna, BC, V1V 1V7, Canada
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29
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Teste FP, Kardol P, Turner BL, Wardle DA, Zemunik G, Renton M, Laliberté E. Toward more robust plant–soil feedback research: Comment. Ecology 2019; 100:e02590. [DOI: 10.1002/ecy.2590] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Revised: 10/03/2018] [Accepted: 11/13/2018] [Indexed: 11/11/2022]
Affiliation(s)
- François P. Teste
- Grupo de Estudios Ambientales IMASL‐CONICET & Universidad Nacional de San Luis Avenida Ejercito de los Andes 950 (5700) San Luis Argentina
- School of Biological Sciences The University of Western Australia 35 Stirling Highway Crawley (Perth) Western Australia 6009 Australia
| | - Paul Kardol
- Department of Forest Ecology and Management Swedish University of Agricultural Sciences Umeå SE‐901 83 Sweden
| | - Benjamin L. Turner
- School of Biological Sciences The University of Western Australia 35 Stirling Highway Crawley (Perth) Western Australia 6009 Australia
- Smithsonian Tropical Research Institute Apartado 0843‐03092 Balboa Republic of Panama
| | - David A. Wardle
- Department of Forest Ecology and Management Swedish University of Agricultural Sciences Umeå SE‐901 83 Sweden
- Asian School of the Environment Nanyang Technological University 50 Nanyang Avenue Singapore 639798 Singapore
| | - Graham Zemunik
- School of Biological Sciences The University of Western Australia 35 Stirling Highway Crawley (Perth) Western Australia 6009 Australia
- Smithsonian Tropical Research Institute Apartado 0843‐03092 Balboa Republic of Panama
| | - Michael Renton
- School of Biological Sciences The University of Western Australia 35 Stirling Highway Crawley (Perth) Western Australia 6009 Australia
| | - Etienne Laliberté
- School of Biological Sciences The University of Western Australia 35 Stirling Highway Crawley (Perth) Western Australia 6009 Australia
- Centre sur la Biodiversité Département de Sciences Biologiques Institut de Recherche en Biologie Végétale Université de Montréal 4101 Sherbrooke Est Montréal Quebec H1X 2B2 Canada
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30
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Lu X, He M, Ding J, Siemann E. Latitudinal variation in soil biota: testing the biotic interaction hypothesis with an invasive plant and a native congener. THE ISME JOURNAL 2018; 12:2811-2822. [PMID: 30013163 PMCID: PMC6246596 DOI: 10.1038/s41396-018-0219-5] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Revised: 06/06/2018] [Accepted: 06/11/2018] [Indexed: 02/04/2023]
Abstract
Soil biota community structure can change with latitude, but the effects of changes on native plants, invasive plants, and their herbivores remain unclear. Here, we examined latitudinal variation in the soil biota community associated with the invasive plant Alternanthera philoxeroides and its native congener A. sessilis, and the effects of soil biota community variation on these plants and the beetle Agasicles hygrophila. We characterized the soil bacterial and fungal communities and root-knot nematodes of plant rhizospheres collected from 22 °N to 36.6 °N in China. Soil biota community structure changed with latitude as a function of climate and soil properties. Root-knot nematode abundance and potential soil fungal pathogen diversity (classified with FUNGuild) decreased with latitude, apparently due to higher soil pH and lower temperatures. A greenhouse experiment and lab bioassay showed native plant mass, seed production, and mass of beetles fed native foliage increased with soil collection latitude. However, there were no latitudinal patterns for the invasive plant. These results suggest that invasive and native plants and, consequently, their herbivores have different responses to latitudinal changes in soil-borne enemies, potentially creating spatial variation in enemy release or biotic resistance. This highlights the importance of linking above- and below-ground multitrophic interactions to explore the role of soil biota in non-native plant invasions with a biogeographic approach.
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Affiliation(s)
- Xinmin Lu
- Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China.
- School of Life Sciences, Central China Normal University, Wuhan, Hubei, China.
| | - Minyan He
- Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Jianqing Ding
- College of Life Sciences, Henan University, Kaifeng, Henan, China.
| | - Evan Siemann
- Biosciences Department, Rice University, Houston, TX, USA
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31
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Kadowaki K, Yamamoto S, Sato H, Tanabe AS, Hidaka A, Toju H. Mycorrhizal fungi mediate the direction and strength of plant-soil feedbacks differently between arbuscular mycorrhizal and ectomycorrhizal communities. Commun Biol 2018; 1:196. [PMID: 30480098 PMCID: PMC6244237 DOI: 10.1038/s42003-018-0201-9] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Accepted: 10/22/2018] [Indexed: 11/23/2022] Open
Abstract
Plants influence their soil environment, which affects the next generation of seedlings that can be established. While research has shown that such plant-soil feedbacks occur in the presence of mycorrhizal fungi, it remains unclear when and how mycorrhizal fungi mediate the direction and strength of feedbacks in tree communities. Here we show that arbuscular mycorrhizal and ectomycorrhizal fungal guilds mediate plant-soil feedbacks differently to influence large-scale patterns such as tree species coexistence and succession. When seedlings are grown under the same mycorrhizal type forest, arbuscular mycorrhizal plant species exhibit negative or neutral feedbacks and ectomycorrhizal plant species do neutral or positive feedbacks. In contrast, positive and neutral feedbacks dominate when seedlings are grown in associations within the same versus different mycorrhizal types. Thus, ectomycorrhizal communities show more positive feedbacks than arbuscular mycorrhizal communities, potentially explaining why most temperate forests are ectomycorrhizal.
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Affiliation(s)
- Kohmei Kadowaki
- Center for Ecological Research, Kyoto University, Hirano 2, Otsu, Shiga, 520-2113, Japan.
- Research and Educational Unit for Studies on Connectivity of Hills, Humans and Oceans, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo, Kyoto, 606-8502, Japan.
| | - Satoshi Yamamoto
- Graduate School of Science, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo, Kyoto, 606-8502, Japan
| | - Hirotoshi Sato
- Graduate School of Human and Environmental Studies, Kyoto University, Yoshida Nihonmatsu-cho, Sakyo, Kyoto, 606-8501, Japan
| | - Akifumi S Tanabe
- Faculty of Science and Technology, Ryukoku University, 1-5 Yokotani, Seta Oe-cho, Otsu, Shiga, 520-2194, Japan
| | - Amane Hidaka
- Graduate School of Agriculture, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo, Kyoto, 606-8502, Japan
| | - Hirokazu Toju
- Center for Ecological Research, Kyoto University, Hirano 2, Otsu, Shiga, 520-2113, Japan
- Precursory Research for Embryonic Science and Technology (PRESTO), Japan Science and Technology Agency, Kawaguchi, Saitama, 332-0012, Japan
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32
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Hahn PG, Bullington L, Larkin B, LaFlamme K, Maron JL, Lekberg Y. Effects of Short- and Long-Term Variation in Resource Conditions on Soil Fungal Communities and Plant Responses to Soil Biota. FRONTIERS IN PLANT SCIENCE 2018; 9:1605. [PMID: 30459793 DOI: 10.6084/m9.figshare.5926378] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 03/19/2018] [Accepted: 10/17/2018] [Indexed: 05/23/2023]
Abstract
Soil biota can strongly influence plant performance with effects ranging from negative to positive. However, shifts in resource availability can influence plant responses, with soil pathogens having stronger negative effects in high-resource environments and soil mutualists, such as arbuscular mycorrhizal fungi (AMF), having stronger positive effects in low-resource environments. Yet the relative importance of long-term vs. short-term variation in resources on soil biota and plant responses is not well-known. To assess this, we grew the perennial herb Asclepias speciosa in a greenhouse experiment that crossed a watering treatment (wet vs. dry treatment) with a manipulation of soil biota (live vs. sterilized soil) collected from two geographic regions (Washington and Minnesota) that vary greatly in annual precipitation. Because soil biota can influence many plant functional traits, we measured biomass as well as resource acquisition (e.g., root:shoot, specific leaf area) and defense (e.g., trichome and latex production) traits. Due to their important role as mutualists and pathogens, we also characterized soil fungal communities in the field and greenhouse and used curated databases to assess fungal composition and potential function. We found that the experimental watering treatment had a greater effect than soil biota origin on plant responses; most plant traits were negatively affected by live soils under wet conditions, whereas responses were neutral or positive in live dry soil. These consistent differences in plant responses occurred despite clear differences in soil fungal community composition between inoculate origin and watering treatments, which indicates high functional redundancy among soil fungi. All plants grown in live soil were highly colonized by AMF and root colonization was higher in wet than dry soil; root colonization by other fungi was low in all treatments. The most parsimonious explanation for negative plant responses in wet soil is that AMF became parasitic under conditions that alleviated resource limitation. Thus, plant responses appeared driven by shifts within rather than between fungal guilds, which highlights the importance of coupling growth responses with characterizations of soil biota to fully understand underlying mechanisms. Collectively these results highlight how short-term changes in environmental conditions can mediate complex interactions between plants and soil biota.
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Affiliation(s)
- Philip G Hahn
- Division of Biological Sciences, University of Montana, Missoula, MT, United States
| | | | | | | | - John L Maron
- Division of Biological Sciences, University of Montana, Missoula, MT, United States
| | - Ylva Lekberg
- MPG Ranch, Missoula, MT, United States
- Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT, United States
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Hahn PG, Bullington L, Larkin B, LaFlamme K, Maron JL, Lekberg Y. Effects of Short- and Long-Term Variation in Resource Conditions on Soil Fungal Communities and Plant Responses to Soil Biota. FRONTIERS IN PLANT SCIENCE 2018; 9:1605. [PMID: 30459793 PMCID: PMC6233719 DOI: 10.3389/fpls.2018.01605] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2018] [Accepted: 10/17/2018] [Indexed: 05/07/2023]
Abstract
Soil biota can strongly influence plant performance with effects ranging from negative to positive. However, shifts in resource availability can influence plant responses, with soil pathogens having stronger negative effects in high-resource environments and soil mutualists, such as arbuscular mycorrhizal fungi (AMF), having stronger positive effects in low-resource environments. Yet the relative importance of long-term vs. short-term variation in resources on soil biota and plant responses is not well-known. To assess this, we grew the perennial herb Asclepias speciosa in a greenhouse experiment that crossed a watering treatment (wet vs. dry treatment) with a manipulation of soil biota (live vs. sterilized soil) collected from two geographic regions (Washington and Minnesota) that vary greatly in annual precipitation. Because soil biota can influence many plant functional traits, we measured biomass as well as resource acquisition (e.g., root:shoot, specific leaf area) and defense (e.g., trichome and latex production) traits. Due to their important role as mutualists and pathogens, we also characterized soil fungal communities in the field and greenhouse and used curated databases to assess fungal composition and potential function. We found that the experimental watering treatment had a greater effect than soil biota origin on plant responses; most plant traits were negatively affected by live soils under wet conditions, whereas responses were neutral or positive in live dry soil. These consistent differences in plant responses occurred despite clear differences in soil fungal community composition between inoculate origin and watering treatments, which indicates high functional redundancy among soil fungi. All plants grown in live soil were highly colonized by AMF and root colonization was higher in wet than dry soil; root colonization by other fungi was low in all treatments. The most parsimonious explanation for negative plant responses in wet soil is that AMF became parasitic under conditions that alleviated resource limitation. Thus, plant responses appeared driven by shifts within rather than between fungal guilds, which highlights the importance of coupling growth responses with characterizations of soil biota to fully understand underlying mechanisms. Collectively these results highlight how short-term changes in environmental conditions can mediate complex interactions between plants and soil biota.
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Affiliation(s)
- Philip G. Hahn
- Division of Biological Sciences, University of Montana, Missoula, MT, United States
| | | | | | | | - John L. Maron
- Division of Biological Sciences, University of Montana, Missoula, MT, United States
| | - Ylva Lekberg
- MPG Ranch, Missoula, MT, United States
- Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT, United States
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Erratum. Ecology 2018; 99:2642. [PMID: 30383308 DOI: 10.1002/ecy.2241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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