1
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He JB, Wang Y, Zhang GH, Wang JA, Chen YS, Jia J, Lv XM, Ren FC, Chen B, Cao YR. Secondary metabolites from the Actinomadura sp. and their cytotoxic activity. Fitoterapia 2024; 173:105806. [PMID: 38181893 DOI: 10.1016/j.fitote.2023.105806] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Revised: 12/27/2023] [Accepted: 12/28/2023] [Indexed: 01/07/2024]
Abstract
Actinomadura sp., which is usually found in muddy habitats, produces various secondary metabolites with biological activities. In this study, five new compounds named formosensin A (1), formosensin B (2), oxanthroquinone-3-O-α-d-mannose (8), oxanthromicin A (9), and oxanthromicin B (10) were isolated from the culture of Actinomadura sp. together with five known compounds (3-7). Their structures were elucidated by extensive spectroscopic methods including NMR and MS. In particular, the absolute configurations of compounds 1 and 2 were determined using computational methods. Moreover, compounds 1-2 and 8-10 were screened for cytotoxic activity using a panel of human tumor cell lines. Compound 9 induced significant cytotoxicity in five human tumor cell lines (HL-60, A-549, SMMC-7721, MCF-7, and SW480) with IC50 values of 8.7, 17.5, 15.0, 17.8, and 14.6 μM, respectively. These findings suggested that compound 9 could provide therapeutic benefits in the treatment of tumor-related diseases.
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Affiliation(s)
- Jiang-Bo He
- School of Medicine, Kunming University, Kunming 650214, PR China
| | - Ying Wang
- School of Medicine, Kunming University, Kunming 650214, PR China
| | - Gao-Hong Zhang
- School of Medicine, Kunming University, Kunming 650214, PR China
| | - Ji-Ai Wang
- School of Medicine, Kunming University, Kunming 650214, PR China
| | - Yi-Shu Chen
- Yunnan University of Traditional Chinese Medicine, Kunming 650500, PR China
| | - Jing Jia
- School of Medicine, Kunming University, Kunming 650214, PR China
| | - Xiao-Man Lv
- Yunnan University of Traditional Chinese Medicine, Kunming 650500, PR China
| | - Fu-Cai Ren
- School of Pharmacy, Anhui Medical University, Hefei 230032, PR China
| | - Bing Chen
- School of Medicine, Kunming University, Kunming 650214, PR China.
| | - Yan-Ru Cao
- School of Medicine, Kunming University, Kunming 650214, PR China.
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2
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Li ZR, Li R, Pasternack L, Chen P, Wong CH. Chemical Synthesis of a Keto Sugar Nucleotide. J Org Chem 2023. [PMID: 37126664 DOI: 10.1021/acs.joc.3c00553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Keto sugar nucleotides (KSNs) are common and versatile precursors to various deoxy sugar nucleotides, which are substrates for the corresponding glycosyltransferases involved in the biosynthesis of glycoproteins, glycolipids, and natural products. However, there has been no KSN synthesized chemically due to the inherent instability. Herein, the first chemical synthesis of the archetypal KSN TDP-4-keto-6-deoxy-d-glucose (1) is achieved by an efficient and optimized route, providing feasible access to other KSNs and analogues, thereby opening a new avenue for new applications.
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Affiliation(s)
- Zhong-Rui Li
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States
| | - Ruofan Li
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States
| | - Laura Pasternack
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States
| | - Pengxi Chen
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States
| | - Chi-Huey Wong
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States
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3
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Ahmadipour S, Winsbury R, Köhler D, Pergolizzi G, Nepogodiev SA, Chessa S, Dedola S, Wang M, Voglmeir J, Field RA. β-1,2-Oligomannan phosphorylase-mediated synthesis of potential oligosaccharide vaccine candidates. Carbohydr Res 2023; 528:108807. [PMID: 37094534 DOI: 10.1016/j.carres.2023.108807] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Revised: 04/03/2023] [Accepted: 04/05/2023] [Indexed: 04/26/2023]
Abstract
β-(1,2)-Mannan antigens incorporated into vaccines candidates for immunization studies, showed that antibodies raised against β-(1,2)-mannotriose antigens can protect against disseminated candidiasis. Until recently, β-(1,2)- mannans could only be obtained by isolation from microbial cultures, or by lengthy synthetic strategies involving protecting group manipulation. The discovery of two β-(1,2)-mannoside phosphorylases, Teth514_1788 and Teth514_1789, allowed efficient access to these compounds. In this work, Teth514_1788 was utilised to generate β-(1,2)-mannan antigens, tri- and tetra-saccharides, decorated with a conjugation tether at the reducing end, suitable to be incorporated on a carrier en-route to novel vaccine candidates, illustrated here by conjugation of the trisaccharide to BSA.
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Affiliation(s)
- Sanaz Ahmadipour
- Manchester Institute of Biotechnology and Department of Chemistry, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Rebecca Winsbury
- Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7TJ, UK
| | - Dominic Köhler
- Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7TJ, UK
| | - Giulia Pergolizzi
- Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7TJ, UK
| | - Sergey A Nepogodiev
- Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7TJ, UK
| | - Simona Chessa
- Iceni Glycoscience Ltd, Norwich Research Park, Norwich, NR4 7GJ, UK
| | - Simone Dedola
- Iceni Glycoscience Ltd, Norwich Research Park, Norwich, NR4 7GJ, UK
| | - Meng Wang
- Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7TJ, UK; College of Food Science and Technology, Nanjing Agricultural University, Nanjing, 210095, China
| | - Josef Voglmeir
- College of Food Science and Technology, Nanjing Agricultural University, Nanjing, 210095, China
| | - Robert A Field
- Manchester Institute of Biotechnology and Department of Chemistry, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK; Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7TJ, UK; Iceni Glycoscience Ltd, Norwich Research Park, Norwich, NR4 7GJ, UK.
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4
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Matsumaru T, Sakuratani K, Yanaka S, Kato K, Yamasaki S, Fujimoto Y. Fungal β‐mannosyloxymannitol glycolipids and their analogues: synthesis and Mincle‐mediated signaling activity. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200109] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Takanori Matsumaru
- Keio University: Keio Gijuku Daigaku Faculty of Science and Technology JAPAN
| | - Kasumi Sakuratani
- Keio University Faculty of Science and Technology Graduate School of Science and Technology: Keio Gijuku Daigaku Rikogakubu Daigakuin Rikogaku Kenkyuka Faculty of Science and Technology JAPAN
| | - Saeko Yanaka
- National institutes of Natural Sciences Exploratory Research Center On Life and Living Systems (ExCELLS) and Institute for Molecular Science (IMS) JAPAN
| | - Koichi Kato
- National Institutes of Natural Sciences Exploratory Research Center On Life and Living Systems (ExCELLS) and Institute for Molecular Science (IMS) JAPAN
| | - Sho Yamasaki
- Osaka University: Osaka Daigaku Department of Molecular Immunology, Research Institute for Microbial Diseases/Laboratory of Molecular Immunology, Immunology Frontier Research Center (WPI-IFReC) JAPAN
| | - Yukari Fujimoto
- Keio University Department of Chemistry, Faculty of Science and Technology 3-14-1 Hiyoshi, Kohoku-ku 223-8522 Yokohama JAPAN
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5
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Nakagawa Y, Yamaji F, Miyanishi W, Ojika M, Igarashi Y, Ito Y. Binding Evaluation of Pradimicins for Oligomannose Motifs from Fungal Mannans. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2021. [DOI: 10.1246/bcsj.20200305] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Yu Nakagawa
- Department of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601, Japan
- Institute for Glyco-core Research (iGCORE), Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601, Japan
- RIKEN Cluster for Pioneering Research, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Fumiya Yamaji
- Department of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601, Japan
| | - Wataru Miyanishi
- Department of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601, Japan
| | - Makoto Ojika
- Department of Applied Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601, Japan
| | - Yasuhiro Igarashi
- Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama 939-0398, Japan
| | - Yukishige Ito
- RIKEN Cluster for Pioneering Research, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
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6
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Maki Y, Nomura K, Okamoto R, Izumi M, Mizutani Y, Kajihara Y. Acceleration and Deceleration Factors on the Hydrolysis Reaction of 4,6- O-Benzylidene Acetal Group. J Org Chem 2020; 85:15849-15856. [PMID: 32343902 DOI: 10.1021/acs.joc.0c00395] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The benzylidene acetal group is one of the most important protecting groups not only in carbohydrate chemistry but also in general organic chemistry. In the case of 4,6-O-benzylidene glycosides, we previously found that the stereochemistry at 4-position altered the reaction rate constant for hydrolysis of benzylidene acetal group. However, a detail of the acceleration or deceleration factor was still unclear. In this work, the hydrolysis reaction of benzylidene acetal group was analyzed using the Arrhenius and Eyring plot to obtain individual parameters for glucosides (Glc), mannosides (Man), and galactosides (Gal). The Arrhenius and Eyring plot indicated that the pre-exponential factor (A) and ΔS⧧ were critical for the smallest reaction rate constant of Gal among nonacetylated substrates. On the other hand, both Ea/ΔH⧧ and A/ΔS⧧ were influential for the smallest reaction rate constant of Gal among diacetylated substrates. All parameters obtained suggested that the rate constant for hydrolysis reaction was regulated by protonation and hydration steps along with solvation. The obtained parameters support wide use of benzylidene acetal group as orthogonal protection of cis- and trans-fused bicyclic systems through the fast hydrolysis of the trans-fused benzylidene acetal group.
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Affiliation(s)
- Yuta Maki
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Kota Nomura
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Ryo Okamoto
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Masayuki Izumi
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Yasuhisa Mizutani
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Yasuhiro Kajihara
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
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7
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Adak T, Morales DL, Cook AJ, Grigg JC, Murphy MEP, Tanner ME. ArnD is a deformylase involved in polymyxin resistance. Chem Commun (Camb) 2020; 56:6830-6833. [PMID: 32432293 DOI: 10.1039/d0cc02241a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The modification of lipid A with cationic 4-amino-4-deoxy-l-arabinose residues serves to confer resistance against cationic peptide antibiotics in Gram-negative bacteria. In this work, the enzyme ArnD is shown to act as a metal-dependent deformylase in the biosynthesis of this carbohydrate.
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Affiliation(s)
- Taniya Adak
- Department of Chemistry, University of British Columbia, Vancouver, BC V6T 1Z1, Canada.
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8
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Kurfiřt M, Červenková Št’astná L, Dračínský M, Müllerová M, Hamala V, Cuřínová P, Karban J. Stereoselectivity in Glycosylation with Deoxofluorinated Glucosazide and Galactosazide Thiodonors. J Org Chem 2019; 84:6405-6431. [DOI: 10.1021/acs.joc.9b00705] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Affiliation(s)
- Martin Kurfiřt
- Institute of Chemical Process Fundamentals of the CAS, v. v. i, Rozvojová 135, 16502 Praha, Czech Republic
| | - Lucie Červenková Št’astná
- Institute of Chemical Process Fundamentals of the CAS, v. v. i, Rozvojová 135, 16502 Praha, Czech Republic
| | - Martin Dračínský
- Institute of Organic Chemistry and Biochemistry of the CAS, Flemingovo náměstí 542/2, 16610 Praha, Czech Republic
| | - Monika Müllerová
- Institute of Chemical Process Fundamentals of the CAS, v. v. i, Rozvojová 135, 16502 Praha, Czech Republic
| | - Vojtěch Hamala
- Institute of Chemical Process Fundamentals of the CAS, v. v. i, Rozvojová 135, 16502 Praha, Czech Republic
| | - Petra Cuřínová
- Institute of Chemical Process Fundamentals of the CAS, v. v. i, Rozvojová 135, 16502 Praha, Czech Republic
| | - Jindřich Karban
- Institute of Chemical Process Fundamentals of the CAS, v. v. i, Rozvojová 135, 16502 Praha, Czech Republic
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9
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Köllmann C, Jones PG, Werz DB. Synthesis of 5-C-Methylated d-Mannose, d-Galactose, l-Gulose, and l-Altrose and Their Structural Elucidation by NMR Spectroscopy. Org Lett 2018; 20:1220-1223. [PMID: 29406726 DOI: 10.1021/acs.orglett.8b00144] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
C5/C6-Spirocyclopropanation of exocyclic enol esters followed by alkali ring-opening of the three-membered ring was used for the diastereoselective preparation of 5-C-methylated d-mannose, d-galactose, l-gulose, and l-altrose. Extensive NMR studies demonstrated an increase of furanose form by 5-C-methylation in almost all cases.
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Affiliation(s)
- Christoph Köllmann
- Institute for Organic Chemistry and ‡ Institute for Inorganic and Analytical Chemistry, Technische Universität Braunschweig , Hagenring 30, 38106 Braunschweig, Germany
| | - Peter G Jones
- Institute for Organic Chemistry and ‡ Institute for Inorganic and Analytical Chemistry, Technische Universität Braunschweig , Hagenring 30, 38106 Braunschweig, Germany
| | - Daniel B Werz
- Institute for Organic Chemistry and ‡ Institute for Inorganic and Analytical Chemistry, Technische Universität Braunschweig , Hagenring 30, 38106 Braunschweig, Germany
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10
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Liu B, Liu X, Zhang JR, Liu G. A Natural Lipotrisaccharide and Its Derivatives Selectively Lyse Streptococcus pneumoniae via Interaction with Cell Membrane. ACS Infect Dis 2017; 3:438-453. [PMID: 28264558 DOI: 10.1021/acsinfecdis.7b00008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A natural lipotrisaccharide (NP000778, 1a), a new triglycosidic tri-O-substituted glycolipid isolated from the Morinda citrifolia plant, and its chemical derivatives were identified to be active against major Gram-positive pathogens, particularly Streptococcus pneumoniae. Additional evidence indicated that 1a and its synthetic derivatives exerted their bactericidal activities against S. pneumoniae by selectively targeting the bacterial membrane, leading to the rapid lysis of the pneumococci. Efficient synthesis of 1a and its derivatives was performed using an application of the intramolecular aglycon delivery (IAD) reaction to establish its structure-activity relationships (SARs). SAR analysis indicated that trisaccharide glycolipid compounds showed good selectivity and high potency against S. pneumoniae. These compounds contain a linear chain with a chain length from C3 to C9 at the 2-position (R1) and 4'-position (R3), as well as a 2-methyl butyryl group at the 3'-position (R2), without an aza substitution in the lipid chain. This is the first lipotrisaccharide identified with potent bactericidal activity via interaction with cell membrane. The results reported herein offer a valuable guideline for the design of glycolipid derivatives that selectively target pathogenic bacteria.
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Affiliation(s)
- Bo Liu
- School of Pharmaceutical Sciences, Beijing 100084, People’s Republic of China
- Beijing Institute of Petrochemical Technology, Beijing 102607, People’s Republic of China
| | - Xue Liu
- Center
for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing 100084, People’s Republic of China
| | - Jing-Ren Zhang
- Center
for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing 100084, People’s Republic of China
| | - Gang Liu
- School of Pharmaceutical Sciences, Beijing 100084, People’s Republic of China
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11
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Ring-opening polymerization of new 3- O -branched 1, 6-anhydro glucopyranose di- and trisaccharide monomers. Carbohydr Res 2017; 446-447:52-60. [DOI: 10.1016/j.carres.2017.04.017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2017] [Revised: 04/10/2017] [Accepted: 04/19/2017] [Indexed: 11/23/2022]
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12
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Mende M, Nieger M, Bräse S. Chemical Synthesis of Modified Hyaluronic Acid Disaccharides. Chemistry 2017; 23:12283-12296. [PMID: 28423199 DOI: 10.1002/chem.201701238] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2017] [Indexed: 02/04/2023]
Abstract
Herein we report a chemical synthesis towards new modified hyaluronic acid oligomers by using only commercially available d-glucose and d-glucosamine hydrochloride. The various protected hyaluronic acid disaccharides were synthesized bearing new functional groups at C-6 of the β-d-glucuronic acid moiety with a view to structure-related biological activity tests. The orthogonal protecting group pattern allows ready access to the corresponding higher oligomers. Also, 1 H NMR studies of the new derivatives demonstrated the effect of the various functional groups on the intramolecular electronic environment.
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Affiliation(s)
- Marco Mende
- Institute of Organic Chemistry, Karlsruhe Institute of Technology, Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
| | - Martin Nieger
- Department of Chemistry, University of Helsinki, P. O. Box 55, 00014, Helsinki, Finland
| | - Stefan Bräse
- Institute of Organic Chemistry, Karlsruhe Institute of Technology, Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany.,Institute of Toxicology and Genetics, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
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13
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van der Vorm S, Hansen T, Overkleeft HS, van der Marel GA, Codée JDC. The influence of acceptor nucleophilicity on the glycosylation reaction mechanism. Chem Sci 2017; 8:1867-1875. [PMID: 28553477 PMCID: PMC5424809 DOI: 10.1039/c6sc04638j] [Citation(s) in RCA: 113] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2016] [Accepted: 11/08/2016] [Indexed: 01/20/2023] Open
Abstract
A set of model nucleophiles of gradually changing nucleophilicity is used to probe the glycosylation reaction mechanism. Glycosylations of ethanol-based acceptors, bearing varying amounts of fluorine atoms, report on the dependency of the stereochemistry in condensation reactions on the nucleophilicity of the acceptor. Three different glycosylation systems were scrutinized, that differ in the reaction mechanism, that - putatively - prevails during the coupling reaction. It is revealed that the stereoselectivity in glycosylations of benzylidene protected glucose donors are very susceptible to acceptor nucleophilicity whereas condensations of benzylidene mannose and mannuronic acid donors represent more robust glycosylation systems in terms of diastereoselectivity. The change in stereoselectivity with decreasing acceptor nucleophilicity is related to a change in reaction mechanism shifting from the SN2 side to the SN1 side of the reactivity spectrum. Carbohydrate acceptors are examined and the reactivity-selectivity profile of these nucleophiles mirrored those of the model acceptors studied. The set of model ethanol acceptors thus provides a simple and effective "toolbox" to investigate glycosylation reaction mechanisms and report on the robustness of glycosylation protocols.
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Affiliation(s)
- S van der Vorm
- Leiden Institute of Chemistry , Leiden University , Einsteinweg 55 , 2333 CC Leiden , The Netherlands .
| | - T Hansen
- Leiden Institute of Chemistry , Leiden University , Einsteinweg 55 , 2333 CC Leiden , The Netherlands .
| | - H S Overkleeft
- Leiden Institute of Chemistry , Leiden University , Einsteinweg 55 , 2333 CC Leiden , The Netherlands .
| | - G A van der Marel
- Leiden Institute of Chemistry , Leiden University , Einsteinweg 55 , 2333 CC Leiden , The Netherlands .
| | - J D C Codée
- Leiden Institute of Chemistry , Leiden University , Einsteinweg 55 , 2333 CC Leiden , The Netherlands .
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14
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Karelin AA, Tsvetkov YE, Paulovičová E, Paulovičová L, Nifantiev NE. A Blockwise Approach to the Synthesis of (1→2)-Linked Oligosaccharides Corresponding to Fragments of the Acid-Stable β-Mannan from theCandida albicansCell Wall. European J Org Chem 2016. [DOI: 10.1002/ejoc.201501464] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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15
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Saikam V, Dara S, Yadav M, Singh PP, Vishwakarma RA. Dimethyltin Dichloride Catalyzed Regioselective Alkylation of cis-1,2-Diols at Room Temperature. J Org Chem 2015; 80:11916-25. [DOI: 10.1021/acs.joc.5b01898] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Varma Saikam
- Medicinal
Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu 180
001, India
- Academy of Scientific and Innovative Research, Jammu 180001, India
| | - Saidulu Dara
- Medicinal
Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu 180
001, India
- Academy of Scientific and Innovative Research, Jammu 180001, India
| | - Mahipal Yadav
- Medicinal
Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu 180
001, India
| | - Parvinder Pal Singh
- Medicinal
Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu 180
001, India
- Academy of Scientific and Innovative Research, Jammu 180001, India
| | - Ram A. Vishwakarma
- Medicinal
Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu 180
001, India
- Academy of Scientific and Innovative Research, Jammu 180001, India
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16
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Liotta LJ, Chalmers JF, Falco Marshall JN, Ferreira TE, Mullen HE, Pace NJ. Selective 4,6-O-benzylidene formation of methyl α-D-mannopyranoside using 2,6-dimethylbenzaldehyde. Carbohydr Res 2014; 391:31-6. [PMID: 24785384 DOI: 10.1016/j.carres.2014.02.024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2014] [Revised: 02/20/2014] [Accepted: 02/22/2014] [Indexed: 10/25/2022]
Abstract
While methyl α-d-glucopyranosides and α-d-galactopyranosides selectively form 4,6-O-benzylidenes when reacted with excess benzaldehyde in the presence of acid catalyst methyl α-d-mannopyranosides does not exhibit the same selectivity because of the cis-arrangement of the C2 and C3 hydroxyl groups. The selectivity for the 4,6-O-benzylidene is restored by using 2,6-dimethylbenzaldehyde instead of benzaldehyde. In addition the excess 2,6-dimethylbenzaldehyde is easily recovered from the reaction by extraction with petroleum ether and can be reused without further purification. The 2,6-dimethylbenzylidene exhibits properties similar to the unsubstituted benzylidene with regard to chemical synthesis.
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Affiliation(s)
- Louis J Liotta
- Stonehill College, 320 Washington Street, Easton, MA 02357, United States.
| | | | | | - Timothy E Ferreira
- Stonehill College, 320 Washington Street, Easton, MA 02357, United States
| | - Hannah E Mullen
- Stonehill College, 320 Washington Street, Easton, MA 02357, United States
| | - Nicholas J Pace
- Stonehill College, 320 Washington Street, Easton, MA 02357, United States
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17
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Chittela S, Reddy TR, Krishna PR, Kashyap S. “One-pot” access to α-d-mannopyranosides from glycals employing ruthenium catalysis. RSC Adv 2014. [DOI: 10.1039/c4ra08241a] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
An efficient and convenient one-pot method for the preparation of α-d-mannopyranosides from glycal is described.
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Affiliation(s)
- Sravanthi Chittela
- D-207
- Discovery Laboratory
- Organic and Biomolecular Chemistry Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad-500 007, India
| | - Thurpu Raghavender Reddy
- D-207
- Discovery Laboratory
- Organic and Biomolecular Chemistry Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad-500 007, India
| | - Palakodety Radha Krishna
- D-207
- Discovery Laboratory
- Organic and Biomolecular Chemistry Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad-500 007, India
| | - Sudhir Kashyap
- D-207
- Discovery Laboratory
- Organic and Biomolecular Chemistry Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad-500 007, India
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18
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Rahkila J, Ekholm FS, Panchadhayee R, Ardá A, Cañada FJ, Jiménez-Barbero J, Leino R. Synthesis and conformational analysis of phosphorylated β-(1→2) linked mannosides. Carbohydr Res 2014; 383:58-68. [DOI: 10.1016/j.carres.2013.10.017] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2013] [Revised: 10/30/2013] [Accepted: 10/31/2013] [Indexed: 11/28/2022]
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19
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Giordano M, Iadonisi A. Tin-Mediated Regioselective Benzylation and Allylation of Polyols: Applicability of a Catalytic Approach Under Solvent-Free Conditions. J Org Chem 2013; 79:213-22. [DOI: 10.1021/jo402399n] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Affiliation(s)
- Maddalena Giordano
- Department
of Chemical Sciences, University of Naples “Federico II”, Via Cintia 4, Naples 80126, Italy
| | - Alfonso Iadonisi
- Department
of Chemical Sciences, University of Naples “Federico II”, Via Cintia 4, Naples 80126, Italy
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20
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Ekholm FS, Ardá A, Eklund P, André S, Gabius HJ, Jiménez-Barbero J, Leino R. Studies related to Norway spruce galactoglucomannans: chemical synthesis, conformation analysis, NMR spectroscopic characterization, and molecular recognition of model compounds. Chemistry 2012; 18:14392-405. [PMID: 23008171 DOI: 10.1002/chem.201200510] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2012] [Revised: 05/16/2012] [Indexed: 12/20/2022]
Abstract
Galactoglucomannan (GGM) is a polysaccharide mainly consisting of mannose, glucose, and galactose. GGM is the most abundant hemicellulose in the Norway spruce (Picea abies), but is also found in the cell wall of flax seeds, tobacco plants, and kiwifruit. Although several applications for GGM polysaccharides have been developed in pulp and paper manufacturing and the food and medical industries, attempts to synthesize and study distinct fragments of this polysaccharide have not been reported previously. Herein, the synthesis of one of the core trisaccharide units of GGM together with a less-abundant tetrasaccharide fragment is described. In addition, detailed NMR spectroscopic characterization of the model compounds, comparison of the spectral data with natural GGM, investigation of the acetyl-group migration phenomena that takes place in the polysaccharide by using small model compounds, and a binding study between the tetrasaccharide model fragment and a galactose-binding protein (the toxin viscumin) are reported.
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Affiliation(s)
- Filip S Ekholm
- Laboratory of Organic Chemistry, Åbo Akademi University, Piispankatu 8, 20500 Åbo, Finland
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21
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Evaluation of immunostimulatory activities of synthetic mannose-containing structures mimicking the β-(1->2)-linked cell wall mannans of Candida albicans. CLINICAL AND VACCINE IMMUNOLOGY : CVI 2012; 19:1889-93. [PMID: 22993407 DOI: 10.1128/cvi.00298-12] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Immunostimulatory properties of synthetic structures mimicking the β-(1→2)-linked mannans of Candida albicans were evaluated in vitro. Contrary to earlier observations, tumor necrosis factor (TNF) production was not detected after stimulation with mannotetraose in mouse macrophages. Divalent disaccharide 1,4-bis(α-D-mannopyranosyloxy)butane induced TNF and some molecules induced low levels of gamma interferon (IFN-γ) in human peripheral blood mononuclear cells (PBMC).
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22
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Mukherjee C, Ranta K, Savolainen J, Leino R. Synthesis and Immunological Screening of β-Linked Mono- and Divalent Mannosides. European J Org Chem 2012. [DOI: 10.1002/ejoc.201200041] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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23
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Rapid, simple, and efficient deprotection of benzyl/benzylidene protected carbohydrates by utilization of flow chemistry. Tetrahedron Lett 2011. [DOI: 10.1016/j.tetlet.2010.12.109] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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24
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Ekholm FS, Schneider G, Wölfling J, Leino R. Synthesis of a Small Library of Estradiol-Based Glycosteroid Mimics Containing a Modified D-Ring. European J Org Chem 2010. [DOI: 10.1002/ejoc.201001342] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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25
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Hietanen A, Ekholm FS, Leino R, Kanerva LT. Applying Biocatalysis to the Synthesis of Diastereomerically Enriched Cyanohydrin Mannosides. European J Org Chem 2010. [DOI: 10.1002/ejoc.201001131] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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26
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Synthesis of alkyl and cycloalkyl α-d-mannopyranosides and derivatives thereof and their evaluation in the mycobacterial mannosyltransferase assay. Carbohydr Res 2010; 345:1339-47. [DOI: 10.1016/j.carres.2010.03.011] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2010] [Revised: 03/05/2010] [Accepted: 03/09/2010] [Indexed: 10/19/2022]
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27
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Chang SS, Shih CH, Lai KC, Mong KKT. Rate-Dependent Inverse-Addition β-Selective Mannosylation and Contiguous Sequential Glycosylation Involving β-Mannosidic Bond Formation. Chem Asian J 2010; 5:1152-62. [DOI: 10.1002/asia.200900765] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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28
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Ekholm FS, Sinkkonen J, Leino R. Fully deprotected β-(1→2)-mannotetraose forms a contorted α-helix in solution: convergent synthesis and conformational characterization by NMR and DFT. NEW J CHEM 2010. [DOI: 10.1039/b9nj00702d] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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29
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Affiliation(s)
- Sreeman K. Mamidyala
- Department of Chemistry and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, California 92037
| | - M.G. Finn
- Department of Chemistry and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, California 92037
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