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Xiao Y, Dong M, Yang B, Wang S, Liang S, Liu D, Zhang H. Strengthening bioremediation potential: Enterobacter ludwigii ES2 for combined nicosulfuron and Cd contamination through whole genome and microbial diversity community analysis. JOURNAL OF HAZARDOUS MATERIALS 2024; 478:135476. [PMID: 39137549 DOI: 10.1016/j.jhazmat.2024.135476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Revised: 07/11/2024] [Accepted: 08/08/2024] [Indexed: 08/15/2024]
Abstract
Nicosulfuron and Cd are common pollutants that pose significant threats to the environment and human health, particularly under combined stress. This study is the first to remediate environmental nicosulfuron and Cd under combined stress using microbiological techniques. Enterobacter ludwigii ES2 was isolated, characterized, and demonstrated to degrade 93.80 % of nicosulfuron and remove 59.64 % of Cd within 4 d. Potential functional genes, including nicosulfuron degradation genes gstA, gstB, glnQ, glnP, mreB, and sixA, and Cd tolerance/removal-related genes mntA, mntB, mntH, dnaK, znuA, and zupt, were predicted by sequencing the whole genome of strain ES2, and their expression was verified by qRT-PCR. Strain ES2 managed oxidative stress induced by Cd through superoxide dismutase, glutathione, catalase, peroxidase, and malondialdehyde. Furthermore, to repair compound stress, up to 90.48 % of nicosulfuron and 67.74 % of Cd were removed. The community structure analysis indicated that Enterobacteriaceae, Sphingomonadaceae, and Gemmatimonadaceae were dominant populations, with ES2 stably colonizing and becoming the dominant bacterium. In summary, ES2 demonstrated significant potential in remediating nicosulfuron and Cd pollution from various perspectives, providing a solid theoretical foundation.
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Affiliation(s)
- Yufeng Xiao
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China.
| | - Meiqi Dong
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China.
| | - Bingbing Yang
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China.
| | - Siya Wang
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China.
| | - Shuang Liang
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China.
| | - Donghui Liu
- Department of Applied Chemistry, College of Science, China Agricultural University, No. 2, West Yuanmingyuan Road, Beijing 100193, China.
| | - Hao Zhang
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China.
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2
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Yue W, Wang X, Zhang J, Bao J, Yao M. Degradation Characteristics of Nicosulfuron in Water and Soil by MnO 2 Nano-Immobilized Laccase. TOXICS 2024; 12:619. [PMID: 39195721 PMCID: PMC11360116 DOI: 10.3390/toxics12080619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Revised: 08/08/2024] [Accepted: 08/12/2024] [Indexed: 08/29/2024]
Abstract
As a typical sulfonylurea herbicide, nicosulfuron is mainly used to control grass weeds and some broadleaf weeds in corn fields. However, as the amount of use continues to increase, it accumulates in the environment and eventually becomes harmful to the ecosystem. In the present study, a new metallic nanomaterial, δ-MnO2, was prepared, which not only has a similar catalytic mechanism as laccase but also has a significant effect on pesticide degradation. Therefore, the bicatalytic property of MnO2 can be utilized to improve the remediation of nicosulfuron contamination. Firstly, MnO2 nanomaterials were prepared by controlling the hydrothermal reaction conditions, and immobilized laccase was prepared by the adsorption method. Next, we investigate the effects of different influencing factors on the effect of immobilized laccase, MnO2, and free laccase on the degradation of nicosulfuron in water and soil. In addition, we also analyze the metabolic pathway of nicosulfuron degradation in immobilized laccase and the bicatalytic mechanism of MnO2. The results demonstrated that the degradation rate of nicosulfuron in water by immobilized laccase was 88.7%, and the optimal conditions were 50 mg/L, 25 h, 50 °C, and pH 5. For nicosulfuron in soil, the optimal conditions for the degradation by immobilized laccase were found to be 151.1 mg/kg, 46 °C, and pH 5.9; under these conditions, a degradation rate of 90.1% was attained. The findings of this study provide a theoretical reference for the immobilized laccase treatment of sulfonylurea herbicide contamination in water and soil.
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Affiliation(s)
- Wanlei Yue
- School of Environmental and Chemical Engineering, Shenyang University of Technology, Shenyang 110870, China; (W.Y.); (J.Z.); (J.B.)
| | - Xin Wang
- School of Environmental and Chemical Engineering, Shenyang University of Technology, Shenyang 110870, China; (W.Y.); (J.Z.); (J.B.)
| | - Jiale Zhang
- School of Environmental and Chemical Engineering, Shenyang University of Technology, Shenyang 110870, China; (W.Y.); (J.Z.); (J.B.)
| | - Jia Bao
- School of Environmental and Chemical Engineering, Shenyang University of Technology, Shenyang 110870, China; (W.Y.); (J.Z.); (J.B.)
| | - Mengqin Yao
- School of Chemistry and Chemical Engineering, Guizhou University, Guiyang 550025, China;
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3
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Zhao S, Wang J. Biodegradation of atrazine and nicosulfuron by Streptomyces nigra LM01: Performance, degradative pathway, and possible genes involved. JOURNAL OF HAZARDOUS MATERIALS 2024; 471:134336. [PMID: 38640665 DOI: 10.1016/j.jhazmat.2024.134336] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Revised: 04/15/2024] [Accepted: 04/16/2024] [Indexed: 04/21/2024]
Abstract
Microbial herbicide degradation is an efficient bioremediation method. In this study, a strain of Streptomyces nigra, LM01, which efficiently degrades atrazine and nicosulfuron, was isolated from a corn field using a direct isolation method. The degradation effects of the identified strain on two herbicides were investigated and optimized using an artificial neural network. The maximum degradation rates of S. nigra LM01 were 58.09 % and 42.97 % for atrazine and nicosulfuron, respectively. The degradation rate of atrazine in the soil reached 67.94 % when the concentration was 108 CFU/g after 5 d and was less effective than that of nicosulfuron. Whole genome sequencing of strain LM01 helped elucidate the possible degradation pathways of atrazine and nicosulfuron. The protein sequences of strain LM01 were aligned with the sequences of the degraded proteins of the two herbicides by using the National Center for Biotechnology Information platform. The sequence (GE005358, GE001556, GE004212, GE005218, GE004846, GE002487) with the highest query cover was retained and docked with the small-molecule ligands of the herbicides. The results revealed a binding energy of - 6.23 kcal/mol between GE005358 and the atrazine ligand and - 6.66 kcal/mol between GE002487 and the nicosulfuron ligand.
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Affiliation(s)
- Shengchen Zhao
- College of Resource and Environmental Science, Jilin Agricultural University, Changchun 130118, Jilin, China
| | - Jihong Wang
- College of Resource and Environmental Science, Jilin Agricultural University, Changchun 130118, Jilin, China.
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4
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Baysal Ö, Studholme DJ, Jimenez-Quiros C, Tör M. Genome sequence of the plant-growth-promoting bacterium Bacillus velezensis EU07. Access Microbiol 2024; 6:000762.v3. [PMID: 38868377 PMCID: PMC11165630 DOI: 10.1099/acmi.0.000762.v3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Accepted: 04/17/2024] [Indexed: 06/14/2024] Open
Abstract
Many Gram-positive spore-forming rhizobacteria of the genus Bacillus show potential as biocontrol biopesticides that promise improved sustainability and ecological safety in agriculture. Here, we present a draft-quality genome sequence for Bacillus velezensis EU07, which shows growth-promotion in tomato plants and biocontrol against Fusarium head blight. We found that the genome of EU07 is almost identical to that of the commercially used strain QST713, but identified 46 single-nucleotide differences that distinguish these strains from each other. The availability of this genome sequence will facilitate future efforts to unravel the genetic and molecular basis for EU07's beneficial properties.
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Affiliation(s)
- Ömür Baysal
- Department of Molecular Biology and Genetics, Faculty of Science, Mugla Sitki Kocman University, 48000 Menteşe, Turkey
- Department of Biological Sciences, University of Worcester, Worcester, UK
| | | | | | - Mahmut Tör
- Department of Biological Sciences, University of Worcester, Worcester, UK
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Gao Q, Lu X, Li J, Wang P, Li M. Impact of microplastics on nicosulfuron accumulation and bacteria community in soil-earthworms system. JOURNAL OF HAZARDOUS MATERIALS 2024; 465:133414. [PMID: 38181595 DOI: 10.1016/j.jhazmat.2023.133414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 12/23/2023] [Accepted: 12/29/2023] [Indexed: 01/07/2024]
Abstract
Microplastics (MPs) widely co-occur with various pollutants in soils. However, the data related to the impacts of MPs on terrestrial animal and microbial properties in pesticide-contaminated soils are few. In this study, the influence of MPs (0.01%, 0.1%, and 1%) on nicosulfuron concentrations in soil (10 µg/g) and earthworms were investigated, moreover, microbial community structure and diversity in soil and earthworm gut were also measured. After 30 days, the concentration of nicosulfuron in soil decreased to 1.27 µg/g, moreover, the residual concentration of nicosulfuron in soil (1%MPs and nicosulfuron) was only 44.8% of that in the single nicosulfuron treatment group. The accumulation of nicosulfuron in earthworms (1%MPs and nicosulfuron) was 7.37 µg/g, which was 1.82 times of that in the single nicosulfuron treatment group. In addition, 1% MPs decreased the richness and diversity of the soil and gut bacterial community in earthworms as well as altered microbial community composition, leading to the enrichment of specific microbial community. Our findings imply that MPs may change the migration of pesticides to terrestrial animal and as well as microbial diversity in earthworms and soil.
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Affiliation(s)
- Qingchuan Gao
- College of Forestry, Northeast Forestry University, Harbin 150040, China
| | - Xiaohui Lu
- College of Forestry, Northeast Forestry University, Harbin 150040, China
| | - Jinfeng Li
- College of Forestry, Northeast Forestry University, Harbin 150040, China
| | - Ping Wang
- College of Forestry, Northeast Forestry University, Harbin 150040, China
| | - Ming Li
- College of Forestry, Northeast Forestry University, Harbin 150040, China.
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Zhao X, Xie Q, Song B, Riaz M, Lal MK, Wang L, Lin X, Huo J. Research on phytotoxicity assessment and photosynthetic characteristics of nicosulfuron residues on Beta vulgaris L. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 353:120159. [PMID: 38310797 DOI: 10.1016/j.jenvman.2024.120159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Revised: 01/06/2024] [Accepted: 01/20/2024] [Indexed: 02/06/2024]
Abstract
Nicosulfuron is a common herbicide used to control weeds in maize fields. In northeast China, sugar beet is often grown as a subsequent crop after maize, and its frequently suffers from soil nicosulfuron residue damage, but the related toxicity evaluation and photosynthetic physiological mechanisms are not clear. Therefore, we experimented to evaluate the impacts of nicosulfuron residues on beet growth, photochemical properties, and antioxidant defense system. The results showed that when the nicosulfuron residue content reached 0.3 μg kg-1, it inhibited the growth of sugar beet. When it reached 36 μg kg-1 (GR50), the growth stagnated. Compared to the control group, a nicosulfuron residue of 36 μg kg-1 significantly decreased beet plant height (70.93 %), leaf area (91.85 %), dry weights of shoot (70.34 %) and root (32.70 %). It also notably reduced the potential photochemical activity (Fv/Fo) by 12.41 %, the light energy absorption performance index (PIabs) by 46.09 %, and light energy absorption (ABS/CSm) by 6.56 %. It decreased the capture (TRo/CSm) by 9.30 % and transferred energy (ETo/CSm) by 16.13 % per unit leaf cross-section while increasing the energy flux of heat dissipation (DIo/CSm) by 22.85 %. This ultimately impaired the photochemical capabilities of PSI and PSII, leading to a reduction in photosynthetic performance. Furthermore, nicosulfuron increased malondialdehyde (MDA) content while decreasing superoxide dismutase (SOD) and catalase (CAT) activities. In conclusion, this research clarified the toxicity risk level, lethal dose, and harm mechanism of the herbicide nicosulfuron residue. It provides a theoretical foundation for the rational use of herbicides in agricultural production and sugar beet planting management.
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Affiliation(s)
- Xiaoyu Zhao
- National Sugar Crops Improvement Center & Sugar Beet Engineering Research Center Heilongjiang Province & Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education & Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, Heilongjiang University, Harbin, 150080, China
| | - Qing Xie
- National Sugar Crops Improvement Center & Sugar Beet Engineering Research Center Heilongjiang Province & Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education & Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, Heilongjiang University, Harbin, 150080, China
| | - Baiquan Song
- National Sugar Crops Improvement Center & Sugar Beet Engineering Research Center Heilongjiang Province & Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education & Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, Heilongjiang University, Harbin, 150080, China.
| | - Muhammad Riaz
- College of Resources and Environment, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, China
| | - Milan Kumar Lal
- Division of Crop Physiology and Biochemistry, ICAR-National Rice Research Institute, Cuttack 753006, Odisha, India
| | - Longfeng Wang
- National Sugar Crops Improvement Center & Sugar Beet Engineering Research Center Heilongjiang Province & Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education & Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, Heilongjiang University, Harbin, 150080, China
| | - Xiaochen Lin
- National Sugar Crops Improvement Center & Sugar Beet Engineering Research Center Heilongjiang Province & Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education & Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, Heilongjiang University, Harbin, 150080, China
| | - Jialu Huo
- National Sugar Crops Improvement Center & Sugar Beet Engineering Research Center Heilongjiang Province & Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education & Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, Heilongjiang University, Harbin, 150080, China
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7
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Lei Q, Zhong J, Chen SF, Wu S, Huang Y, Guo P, Mishra S, Bhatt K, Chen S. Microbial degradation as a powerful weapon in the removal of sulfonylurea herbicides. ENVIRONMENTAL RESEARCH 2023; 235:116570. [PMID: 37423356 DOI: 10.1016/j.envres.2023.116570] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 06/25/2023] [Accepted: 07/05/2023] [Indexed: 07/11/2023]
Abstract
Sulfonylurea herbicides have been widely used worldwide and play a significant role in modern agricultural production. However, these herbicides have adverse biological effects that can damage the ecosystems and harm human health. As such, rapid and effective techniques that remove sulfonylurea residues from the environment are urgently required. Attempts have been made to remove sulfonylurea residues from environment using various techniques such as incineration, adsorption, photolysis, ozonation, and microbial degradation. Among them, biodegradation is regarded as a practical and environmentally responsible way to eliminate pesticide residues. Microbial strains such as Talaromyces flavus LZM1, Methylopila sp. SD-1, Ochrobactrum sp. ZWS16, Staphylococcus cohnii ZWS13, Enterobacter ludwigii sp. CE-1, Phlebia sp. 606, and Bacillus subtilis LXL-7 can almost completely degrade sulfonylureas. The degradation mechanism of the strains is such that sulfonylureas can be catalyzed by bridge hydrolysis to produce sulfonamides and heterocyclic compounds, which deactivate sulfonylureas. The molecular mechanisms associated with microbial degradation of sulfonylureas are relatively poorly studied, with hydrolase, oxidase, dehydrogenase and esterase currently known to play a pivotal role in the catabolic pathways of sulfonylureas. Till date, there are no reports specifically on the microbial degrading species and biochemical mechanisms of sulfonylureas. Hence, in this article, the degradation strains, metabolic pathways, and biochemical mechanisms of sulfonylurea biodegradation, along with its toxic effects on aquatic and terrestrial animals, are discussed in depth in order to provide new ideas for remediation of soil and sediments polluted by sulfonylurea herbicides.
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Affiliation(s)
- Qiqi Lei
- National Key Laboratory of Green Pesticide, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Jianfeng Zhong
- National Key Laboratory of Green Pesticide, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Shao-Fang Chen
- National Key Laboratory of Green Pesticide, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Siyi Wu
- National Key Laboratory of Green Pesticide, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Yaohua Huang
- National Key Laboratory of Green Pesticide, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Peng Guo
- Zhongshan City Garden Management Center of Guangdong Province, Zhongshan, China
| | - Sandhya Mishra
- Environmental Technologies Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, India
| | - Kalpana Bhatt
- Department of Food Science, Purdue University, West Lafayette, IN, USA.
| | - Shaohua Chen
- National Key Laboratory of Green Pesticide, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China.
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Zhong J, Wu S, Chen WJ, Huang Y, Lei Q, Mishra S, Bhatt P, Chen S. Current insights into the microbial degradation of nicosulfuron: Strains, metabolic pathways, and molecular mechanisms. CHEMOSPHERE 2023; 326:138390. [PMID: 36935058 DOI: 10.1016/j.chemosphere.2023.138390] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Revised: 02/02/2023] [Accepted: 03/11/2023] [Indexed: 06/18/2023]
Abstract
Nicosulfuron is among the sulfonylurea herbicides that are widely used to control annual and perennial grass weeds in cornfields. However, nicosulfuron residues in the environment are likely to cause long-lasting harmful environmental and biological effects. Nicosulfuron degrades via photo-degradation, chemical hydrolysis, and microbial degradation. The latter is crucial for pesticide degradation and has become an essential strategy to remove nicosulfuron residues from the environment. Most previous studies have focused on the screening, degradation characteristics, and degradation pathways of biodegrader microorganisms. The isolated nicosulfuron-degrading strains include Bacillus, Pseudomonas, Klebsiella, Alcaligenes, Rhodopseudomonas, Ochrobactrum, Micrococcus, Serratia, Penicillium, Aspergillus, among others, all of which have good degradation efficiency. Two main intermediates, 2-amino-4,6-dimethoxypyrimidine (ADMP) and 2-aminosulfonyl-N,N-dimethylnicotinamide (ASDM), are produced during microbial degradation and are derived from the C-N, C-S, and S-N bond breaks on the sulfonylurea bridge, covering almost every bacterial degradation pathway. In addition, enzymes related to the degradation of nicosulfuron have been identified successively, including the manganese ABC transporter (hydrolase), Flavin-containing monooxygenase (oxidase), and E3 (esterase). Further in-depth studies based on molecular biology and genetics are needed to elaborate on their role in the evolution of novel catabolic pathways and the microbial degradation of nicosulfuron. To date, few reviews have focused on the microbial degradation and degradation mechanisms of nicosulfuron. This review summarizes recent advances in nicosulfuron degradation and comprehensively discusses the potential of nicosulfuron-degrading microorganisms for bioremediating contaminated environments, providing a reference for further research development on nicosulfuron biodegradation in the future.
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Affiliation(s)
- Jianfeng Zhong
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Siyi Wu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Wen-Juan Chen
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Yaohua Huang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Qiqi Lei
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China
| | - Sandhya Mishra
- Environmental Technologies Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226001, India
| | - Pankaj Bhatt
- Department of Agricultural & Biological Engineering, Purdue University, West Lafayette, 47906, USA.
| | - Shaohua Chen
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, College of Plant Protection, South China Agricultural University, Guangzhou, 510642, China.
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Wang Y, Chen X, Li H, Ma Y, Zeng D, Du L, Jin D. Characterization and genomic analysis of a bensulfuron methyl-degrading endophytic bacterium Proteus sp. CD3 isolated from barnyard grass (Echinochloa crus-galli). Front Microbiol 2022; 13:1032001. [PMID: 36353460 PMCID: PMC9638167 DOI: 10.3389/fmicb.2022.1032001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Accepted: 10/06/2022] [Indexed: 12/04/2022] Open
Abstract
Bensulfuron methyl (BSM) is a widely used sulfonylurea herbicide in agriculture. However, the large-scale BSM application causes severe environmental problems. Biodegradation is an important way to remove BSM residue. In this study, an endophytic bacterium strain CD3, newly isolated from barnyard grass (Echinochloa crus-galli), could effectively degrade BSM in mineral salt medium. The strain CD3 was identified as Proteus sp. based on the phenotypic features, physiological biochemical characteristics, and 16S rRNA gene sequence. The suitable conditions for BSM degradation by this strain were 20–40°C, pH 6–8, the initial concertation of 12.5–200 mg L−1 with 10 g L−1 glucose as additional carbon source. The endophyte was capable of degrading above 98% BSM within 7 d under the optimal degrading conditions. Furthermore, strain CD3 could also effectively degrade other sulfonylurea herbicides including nicosulfuron, halosulfuron methyl, pyrazosulfuron, and ethoxysulfuron. Extracellular enzyme played a critical role on the BSM degradation by strain CD3. Two degrading metabolites were detected and identified by using liquid chromatography–mass spectrometry (LC–MS). The biochemical degradation pathways of BSM by this endophyte were proposed. The genomic analysis of strain CD3 revealed the presence of putative hydrolase or esterase genes involved in BSM degradation, suggesting that a novel degradation enzyme for BSM was present in this BSM-degrading Proteus sp. CD3. The results of this research suggested that strain CD3 may have potential for using in the bioremediation of BSM-contaminated environment.
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Affiliation(s)
- Yanhui Wang
- Institute of Pesticide and Environmental Toxicology, Guangxi University, Nanning, China
- Guangxi Key Laboratory of Biology for Crop Diseases and Insect Pests, Plant Protection Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China
| | - Xianyan Chen
- Institute of Pesticide and Environmental Toxicology, Guangxi University, Nanning, China
| | - Honghong Li
- Institute of Pesticide and Environmental Toxicology, Guangxi University, Nanning, China
| | - Yonglin Ma
- Guangxi Key Laboratory of Biology for Crop Diseases and Insect Pests, Plant Protection Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China
| | - Dongqiang Zeng
- Institute of Pesticide and Environmental Toxicology, Guangxi University, Nanning, China
| | - Liangwei Du
- College of Chemistry and Chemical Engineering, Guangxi University, Nanning, China
- *Correspondence: Liangwei Du,
| | - Decai Jin
- Key Laboratory of Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China
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10
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Xu N, Wu Z, Li X, Yang M, Han J, Lu B, Lu B, Wang J. Effects of nicosulfuron on plant growth and sugar metabolism in sweet maize (Zea mays L.). PLoS One 2022; 17:e0276606. [PMID: 36269745 PMCID: PMC9586374 DOI: 10.1371/journal.pone.0276606] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 10/10/2022] [Indexed: 11/05/2022] Open
Abstract
The sulfonylurea herbicide nicosulfuron is efficient, harmless and selective at low doses and has been widely used in maize cultivation. In this study, a pair of corn sister lines, HK301 (nicosulfuron-tolerence, NT) and HK320 (nicosulfuron-sensitive, NS), was chosen to study the effect of nicosulfuron on plant growth and sugar metabolism in sweet maize (Zea mays L.) seedlings. All the experimental samples were subjected to treatment with water or 80 mg kg–1 of nicosulfuron when the sweet maize seedlings grew to the four-leaf stage. Nicosulfuron significantly inhibited the growth of NS line. The content of sucrose and the activities of sucrose phosphate synthase and sucrose synthase in the two inbred lines increased differentially under nicosulfuron stress compared with the respective control treatment. After nicosulfuron treatment, the activities of hexokinase and 6-phosphofructokinase and the contents of pyruvic acid and citric acid in NS line decreased significantly compared with those of NT line, while the content of sucrose and activities of sucrose phosphate synthase and sucrose synthase increased significantly. The disruption of sugar metabolism in NS line led to a lower supply of energy for growth. This study showed that the glycolysis pathway and the tricarboxylic acid cycle were enhanced in nicosulfuron-tolerant line under nicosulfuron stress in enhancing the adaptability of sweet maize.
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Affiliation(s)
- Ningwei Xu
- College of Landscape and Tourism, Hebei Agricultural University, Baoding, China
- College of Agronomy and Biotechnology, Hebei Key Laboratory of Crop Stress Biology, Hebei Normal University of Science &Technology, Qinhuangdao, China
| | - Zhenxing Wu
- Institute of Maize and Featured Upland Crops, Zhejiang Academy of Agricultural Sciences, Dongyang, China
| | - Xiangling Li
- College of Agronomy and Biotechnology, Hebei Key Laboratory of Crop Stress Biology, Hebei Normal University of Science &Technology, Qinhuangdao, China
| | - Min Yang
- College of Agronomy and Biotechnology, Hebei Key Laboratory of Crop Stress Biology, Hebei Normal University of Science &Technology, Qinhuangdao, China
| | - Jinling Han
- College of Agronomy and Biotechnology, Hebei Key Laboratory of Crop Stress Biology, Hebei Normal University of Science &Technology, Qinhuangdao, China
| | - Bin Lu
- College of Landscape and Tourism, Hebei Agricultural University, Baoding, China
| | - Bingshe Lu
- College of Landscape and Tourism, Hebei Agricultural University, Baoding, China
- * E-mail: (BL); (JW)
| | - Jian Wang
- College of Agronomy and Biotechnology, Hebei Key Laboratory of Crop Stress Biology, Hebei Normal University of Science &Technology, Qinhuangdao, China
- * E-mail: (BL); (JW)
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Transcriptomic response of Pseudomonas nicosulfuronedens LAM1902 to the sulfonylurea herbicide nicosulfuron. Sci Rep 2022; 12:13656. [PMID: 35953636 PMCID: PMC9372043 DOI: 10.1038/s41598-022-17982-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Accepted: 08/03/2022] [Indexed: 12/13/2022] Open
Abstract
The overuse of the herbicide nicosulfuron has become a global environmental concern. As a potential bioremediation technology, the microbial degradation of nicosulfuron shows much promise; however, the mechanism by which microorganisms respond to nicosulfuron exposure requires further study. An isolated soil-borne bacteria Pseudomonas nicosulfuronedens LAM1902 displaying nicosulfuron, chlorimuron-ethyl, and cinosulfuron degradabilities in the presence of glucose, was used to determine the transcriptional responses to nicosulfuron exposure. RNA-Seq results indicated that 1102 differentially expressed genes (DEGs) were up-regulated and 702 down-regulated under nicosulfuron stress. DEGs were significantly enriched in “ABC transporters”, “sulfur metabolism”, and “ribosome” pathways (p ≤ 0.05). Several pathways (glycolysis and pentose phosphate pathways, a two-component regulation system, as well as in bacterial chemotaxis metabolisms) were affected by nicosulfuron exposure. Surprisingly, nicosulfuron exposure showed positive effects on the production of oxalic acid that is synthesized by genes encoding glycolate oxidase through the glyoxylate cycle pathway. The results suggest that P. nicosulfuronedens LAM1902 adopt acid metabolites production strategies in response to nicosulfuron, with concomitant nicosulfuron degradation. Data indicates that glucose metabolism is required during the degradation and adaptation of strain LAM1902 to nicosulfuron stress. The present studies provide a glimpse at the molecular response of microorganisms to sulfonylurea pesticide toxicity and a potential framework for future mechanistic studies.
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Parvulescu VI, Epron F, Garcia H, Granger P. Recent Progress and Prospects in Catalytic Water Treatment. Chem Rev 2021; 122:2981-3121. [PMID: 34874709 DOI: 10.1021/acs.chemrev.1c00527] [Citation(s) in RCA: 67] [Impact Index Per Article: 22.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Presently, conventional technologies in water treatment are not efficient enough to completely mineralize refractory water contaminants. In this context, the implementation of catalytic processes could be an alternative. Despite the advantages provided in terms of kinetics of transformation, selectivity, and energy saving, numerous attempts have not yet led to implementation at an industrial scale. This review examines investigations at different scales for which controversies and limitations must be solved to bridge the gap between fundamentals and practical developments. Particular attention has been paid to the development of solar-driven catalytic technologies and some other emerging processes, such as microwave assisted catalysis, plasma-catalytic processes, or biocatalytic remediation, taking into account their specific advantages and the drawbacks. Challenges for which a better understanding related to the complexity of the systems and the coexistence of various solid-liquid-gas interfaces have been identified.
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Affiliation(s)
- Vasile I Parvulescu
- Department of Organic Chemistry, Biochemistry and Catalysis, University of Bucharest, B-dul Regina Elisabeta 4-12, Bucharest 030016, Romania
| | - Florence Epron
- Université de Poitiers, CNRS UMR 7285, Institut de Chimie des Milieux et Matériaux de Poitiers (IC2MP), 4 rue Michel Brunet, TSA 51106, 86073 Poitiers Cedex 9, France
| | - Hermenegildo Garcia
- Instituto Universitario de Tecnología Química, Universitat Politecnica de Valencia-Consejo Superior de Investigaciones Científicas, Universitat Politencia de Valencia, Av. de los Naranjos s/n, 46022 Valencia, Spain
| | - Pascal Granger
- CNRS, Centrale Lille, Univ. Artois, UMR 8181 - UCCS - Unité de Catalyse et Chimie du Solide, Univ. Lille, F-59000 Lille, France
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