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Vinogradova E, Mukhanbetzhanov N, Nurgaziyev M, Jarmukhanov Z, Aipova R, Sailybayeva A, Bekbossynova M, Kozhakhmetov S, Kushugulova A. Impact of urbanization on gut microbiome mosaics across geographic and dietary contexts. mSystems 2024; 9:e0058524. [PMID: 39287374 PMCID: PMC11494887 DOI: 10.1128/msystems.00585-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2024] [Accepted: 08/22/2024] [Indexed: 09/19/2024] Open
Abstract
This study provides a comprehensive assessment of how urban-rural divides influence gut microbial diversity and composition across the distinct geographical landscapes of Kazakhstan, elucidating the intricate interplay between lifestyle, environment, and gut microbiome. In this prospective cohort study, we enrolled 651 participants from urban centers and rural settlements across Kazakhstan, following ethical approval and informed consent. Comprehensive demographic, dietary, and stool sample data were collected. 16S rRNA gene sequencing and shotgun metagenomics techniques were employed to delineate the intricate patterns of the gut microbiome. A rigorous statistical framework dissected the interplay between urbanization gradients, geography, dietary lifestyles, and microbial dynamics. Our findings demonstrate a stark microbial divide between urban and rural gut ecosystems. The study found significant differences in gut microbiome diversity and composition between urban and rural populations in Kazakhstan. Urban microbiomes exhibited reduced diversity, higher Firmicutes/Bacteroidetes ratios, and increased prevalence of genera Coprococcus and Parasutterella. In contrast, rural populations had greater microbial diversity and abundance of Ligilactobacillus, Sutterella, and Paraprevotella. Urbanization also influenced dietary patterns, with urban areas consuming more salt, cholesterol, and protein, while rural areas had diets richer in carbohydrates and fiber. The study also identified distinct patterns in the prevalence of antibiotic resistance genes and virulence factors between urban and rural gut microbiomes. This study sheds light on how urbanization may be deeply involved in shaping the intricate mosaic of the gut microbiome across Kazakhstan's diverse geographical and dietary landscapes, underscoring the complex interplay between environmental exposures, dietary lifestyles, and the microbial residents inhabiting our intestines. IMPORTANCE The study examined gut microbiome composition across diverse geographical locations in Kazakhstan, spanning urban centers and rural settlements. This allows for thoroughly investigating how urbanization gradients and geographic factors shape the gut microbiome. The study's examination of the gut resistome and prevalence of virulence-associated genes provide essential insights into the public health implications of urbanization-driven microbiome alterations. Collecting comprehensive demographic, dietary, and stool sample data enables the researchers to better understand the relationships between urbanization, nutritional patterns, and gut microbiome composition. The findings have important implications for understanding how urbanization-driven microbiome changes may impact human health and well-being, paving the way for tailored interventions to restore a balanced gut microbial ecology.
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Affiliation(s)
- Elizaveta Vinogradova
- Center for Life Sciences, National Laboratory Astana, Nazarbayev University, Astana, Kazakhstan
| | | | - Madiyar Nurgaziyev
- Center for Life Sciences, National Laboratory Astana, Nazarbayev University, Astana, Kazakhstan
| | - Zharkyn Jarmukhanov
- Center for Life Sciences, National Laboratory Astana, Nazarbayev University, Astana, Kazakhstan
| | - Rakhilya Aipova
- Kazakh Research Institute of Soil Science and Agricultural Chemistry named after U.Uspanov, Almaty, Kazakhstan
| | | | | | - Samat Kozhakhmetov
- Center for Life Sciences, National Laboratory Astana, Nazarbayev University, Astana, Kazakhstan
| | - Almagul Kushugulova
- Center for Life Sciences, National Laboratory Astana, Nazarbayev University, Astana, Kazakhstan
- JSC “National Research Cardiac Surgery Center”, Astana, Kazakhstan
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2
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Rasuli N, Riahi H, Shariatmadari Z, Nohooji MG, Dehestani A, MehrabanJoubani P. Growth enhancement, metabolic profile improvement, and DXR and TPS2 gene expression changes in Thymus vulgaris L. by cyanobacterial inoculation. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2024; 104:5751-5763. [PMID: 38381096 DOI: 10.1002/jsfa.13404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Revised: 12/04/2023] [Accepted: 02/16/2024] [Indexed: 02/22/2024]
Abstract
BACKGROUND In recent decades cyanobacterial species have attracted research attention as potential sources of new biostimulants. In this study, the biostimulant effects of five cyanobacterial suspensions on the growth and essential oil composition of Thymus vulgaris L. were evaluated. The expression of key genes involved in the biosynthesis of thymol and carvacrol, such as DXR and TPS2, were investigated. RESULTS A pot culture experiment revealed that cyanobacterial application significantly improved T. vulgaris L. growth indices, including plant height, dry and fresh weight, leaf and flower number, leaf area, and photosynthetic pigment content. Total phenol and flavonoid content in inoculated plants also showed a significant increase compared with the control. Anabaena torulosa ISB213 inoculation significantly increased root and shoot biomass by about 65.38% and 92.98% compared with the control, respectively. Nostoc calcicola ISB215 inoculation resulted in the highest amount of essential oil accumulation (18.08 ± 0.62) in T. vulgaris leaves, by about 72.19% compared with the control (10.5 ± 0.50%). Interestingly, the amount of limonene in the Nostoc ellipsosporum ISB217 treatment (1.67%) increased significantly compared with the control and other treatments. The highest expression rates of DXR and TPS2 genes were observed in the treatment of N. ellipsosporum ISB217, with 5.92-fold and 5.22-fold increases over the control, respectively. CONCLUSION This research revealed the potential of the cyanobacteria that were studied as promising biostimulants to increase the production of biomass and secondary metabolites of T. vulgaris L., which could be a suitable alternative to chemical fertilizers. © 2024 Society of Chemical Industry.
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Affiliation(s)
- Nasim Rasuli
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Hossein Riahi
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Zeinab Shariatmadari
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | | | - Ali Dehestani
- Genetics and Agricultural Biotechnology Institute of Tabarestan, Sari Agricultural Sciences and Natural Resources University, Sari, Iran
| | - Pooyan MehrabanJoubani
- Department of Basic Sciences, Sari Agricultural Sciences and Natural Resources University, Sari, Iran
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Villamarin-Raad D, Lozano-Puentes HS, Chitiva LC, Costa GM, Díaz-Gallo SA, Díaz-Ariza LA. Changes in Phenolic Profile and Total Phenol and Total Flavonoid Contents of Guadua angustifolia Kunth Plants under Organic and Conventional Fertilization. ACS OMEGA 2023; 8:41223-41231. [PMID: 37970062 PMCID: PMC10634197 DOI: 10.1021/acsomega.3c04579] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 10/04/2023] [Accepted: 10/09/2023] [Indexed: 11/17/2023]
Abstract
Agronomic management of a crop, including the application of fertilizers and biological inoculants, affects the phenol and flavonoid contents of plants producing these metabolites. Guadua angustifolia Kunth, a woody bamboo widely distributed in the Americas, produces several biologically active phenolic compounds. The aim of this study was to evaluate the effect of chemical and organic fertilizers together with the application of biological inoculants on the composition of phenolic compounds in G. angustifolia plants at the nursery stage. In 8-month-old plants, differences were observed in plant biomass (20.27 ± 7.68 g) and in the content of total phenols and flavonoids (21.89 ± 9.64 mg gallic acid equivalents/plant and 2.13 ± 0.98 mg quercetin equivalents/plant, respectively) when using the chemical fertilizer diammonium phosphate (DAP). No significant differences were found owing to the effect of the inoculants, although the plants with the application of Stenotrophomonas sp. on plants fertilized with DAP presented higher values of the metabolites (24.12 ± 6.72 mg gallic acid equivalents/plant and 2.39 ± 0.77 mg quercetin equivalents/plant). The chromatographic profile of phenolic metabolites is dominated by one glycosylated flavonoid, the concentration of which was favored by the application of the inoculants Azospirillum brasilense, Pseudomonas fluorescens, and Stenotrophomonas sp. In the case study, the combined use of DAP and bacterial inoculants is recommended for the production of G. angustifolia plant material with a high content of promising biologically active flavonoids or phenolics.
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Affiliation(s)
- David
A. Villamarin-Raad
- Laboratorio
Asociaciones Suelo Planta Microorganismo (LAMIC), Pontificia Universidad Javeriana Sede, Bogotá 110231, Colombia
| | - Hair S. Lozano-Puentes
- Laboratorio
Asociaciones Suelo Planta Microorganismo (LAMIC), Pontificia Universidad Javeriana Sede, Bogotá 110231, Colombia
| | - Luis Carlos Chitiva
- Grupo
de Investigación Fitoquímica Universidad Javeriana (GIFUJ), Pontificia Universidad Javeriana Sede, Bogotá 110221, Colombia
| | - Geison M. Costa
- Grupo
de Investigación Fitoquímica Universidad Javeriana (GIFUJ), Pontificia Universidad Javeriana Sede, Bogotá 110221, Colombia
| | - Sergio A. Díaz-Gallo
- Laboratorio
Asociaciones Suelo Planta Microorganismo (LAMIC), Pontificia Universidad Javeriana Sede, Bogotá 110231, Colombia
| | - Lucía A. Díaz-Ariza
- Laboratorio
Asociaciones Suelo Planta Microorganismo (LAMIC), Pontificia Universidad Javeriana Sede, Bogotá 110231, Colombia
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Woźniak M, Tyśkiewicz R, Siebielec S, Gałązka A, Jaroszuk-Ściseł J. Metabolic Profiling of Endophytic Bacteria in Relation to Their Potential Application as Components of Multi-Task Biopreparations. MICROBIAL ECOLOGY 2023; 86:2527-2540. [PMID: 37392205 PMCID: PMC10640448 DOI: 10.1007/s00248-023-02260-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 06/21/2023] [Indexed: 07/03/2023]
Abstract
Agricultural crops are exposed to various abiotic and biotic stresses that can constrain crop productivity. Focusing on a limited subset of key groups of organisms has the potential to facilitate the monitoring of the functions of human-managed ecosystems. Endophytic bacteria can enhance plant stress resistance and can help plants to cope with the negative impacts of stress factors through the induction of different mechanisms, influencing plant biochemistry and physiology. In this study, we characterise endophytic bacteria isolated from different plants based on their metabolic activity and ability to synthesise 1-aminocyclopropane-1-carboxylic acid deaminase (ACCD), the activity of hydrolytic exoenzymes, the total phenolic compounds (TPC) and iron-complexing compounds (ICC). Test GEN III MicroPlate indicated that the evaluated endophytes are highly metabolically active, and the best used substrates were amino acids, which may be important in selecting potential carrier components for bacteria in biopreparations. The ACCD activity of strain ES2 (Stenotrophomonas maltophilia) was the highest, whereas that of strain ZR5 (Delftia acidovorans) was the lowest. Overall, the obtained results indicated that ∼91.3% of the isolates were capable of producing at least one of the four hydrolytic enzymes. In addition, most of the tested strains produced ICC and TPC, which play a significant role in reducing stress in plants. The results of this study suggest that the tested endophytic bacterial strains can potentially be used to mitigate climate change-associated stresses in plants and to inhibit plant pathogens.
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Affiliation(s)
- Małgorzata Woźniak
- Department of Agricultural Microbiology, Institute of Soil Science and Plant Cultivation-State Research Institute, Czartoryskich 8, 24-100, Pulawy, Poland.
| | - Renata Tyśkiewicz
- Analytical Laboratory, Łukasiewicz Research Network-New Chemical Syntheses Institute, Al. Tysiąclecia Państwa Polskiego 13a, 24-110, Pulawy, Poland
| | - Sylwia Siebielec
- Department of Agricultural Microbiology, Institute of Soil Science and Plant Cultivation-State Research Institute, Czartoryskich 8, 24-100, Pulawy, Poland
| | - Anna Gałązka
- Department of Agricultural Microbiology, Institute of Soil Science and Plant Cultivation-State Research Institute, Czartoryskich 8, 24-100, Pulawy, Poland
| | - Jolanta Jaroszuk-Ściseł
- Department of Industrial and Environmental Microbiology, Faculty of Biology and Biotechnology, Maria Curie-Skłodowska University, Akademicka 19, 20-033, Lublin, Poland
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Garduño-Félix KG, Rochín-Medina JJ, Murua-López CC, López-Moreno HS, Ramírez K. Biostimulated-sesame sprout extracts as potential agents against Leishmania mexicana. Lett Appl Microbiol 2023; 76:ovad115. [PMID: 37777833 DOI: 10.1093/lambio/ovad115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 09/18/2023] [Accepted: 09/29/2023] [Indexed: 10/02/2023]
Abstract
Leishmania mexicana is one of the causal agents of cutaneous leishmaniasis. Current antileishmanial chemotherapeutics have demonstrated adverse side effects; thus, alternative treatments are needed. In this study, we performed in silico and in vitro analyses of the leishmanicidal potential of the most abundant phenolic compounds identified in black sesame sprouts biostimulated with Bacillus clausii. The molecular docking analysis showed strong interactions (binding free energies between -6.5 and -9.5 kcal/mol) of sesaminol 2-O-triglucoside, pinoresinol dihexoside, isoverbascoside, and apigenin with the arginase, leishmanolysin, cysteine peptidase B, and pyruvate kinase leishmanial enzymes. Furthermore, almost all phenolic compounds interacted with the active site residues of L. mexicana enzymes. In vitro, the B. clausii-biostimulated sprout phenolic extracts and apigenin inhibited the growth of promastigotes with IC50 values of 0.08 mg gallic acid equivalent/mL and 6.42 μM (0.0017 mg/mL), respectively. Additionally, in the macrophage infection model, cells treated with B. clausii-biostimulated sprout phenolic extracts and infected with L. mexicana exhibited significantly (P < 0.05) reduced nitric oxide production and decreased parasite burden. Altogether, our study provides important data related to high efficacy and less toxic natural antileishmanial candidates against promastigotes of L. mexicana.
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Affiliation(s)
- Karime G Garduño-Félix
- Laboratorio de Microbiología Molecular y Bioactivos, Tecnológico Nacional de México-Instituto Tecnológico de Culiacán, 80220 Culiacán, México
| | - Jesús J Rochín-Medina
- Laboratorio de Microbiología Molecular y Bioactivos, Tecnológico Nacional de México-Instituto Tecnológico de Culiacán, 80220 Culiacán, México
| | - Carolina C Murua-López
- CAC BB-UAS-264. Posgrados de la Facultad de Ciencias Químico-Biológicas, Universidad Autonóma de Sinaloa, 80030 Culiacán, México
| | - Héctor S López-Moreno
- CAC BB-UAS-264. Posgrados de la Facultad de Ciencias Químico-Biológicas, Universidad Autonóma de Sinaloa, 80030 Culiacán, México
| | - Karina Ramírez
- Laboratorio de Microbiología Molecular y Bioactivos, Tecnológico Nacional de México-Instituto Tecnológico de Culiacán, 80220 Culiacán, México
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Newberger DR, Minas IS, Manter DK, Vivanco JM. A Microbiological Approach to Alleviate Soil Replant Syndrome in Peaches. Microorganisms 2023; 11:1448. [PMID: 37374950 DOI: 10.3390/microorganisms11061448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 05/23/2023] [Accepted: 05/24/2023] [Indexed: 06/29/2023] Open
Abstract
Replant syndrome (RS) is a global problem characterized by reduced growth, production life, and yields of tree fruit/nut orchards. RS etiology is unclear, but repeated monoculture plantings are thought to develop a pathogenic soil microbiome. This study aimed to evaluate a biological approach that could reduce RS in peach (Prunus persica) orchards by developing a healthy soil bacteriome. Soil disinfection via autoclave followed by cover cropping and cover crop incorporation was found to distinctly alter the peach soil bacteriome but did not affect the RS etiology of RS-susceptible 'Lovell' peach seedlings. In contrast, non-autoclaved soil followed by cover cropping and incorporation altered the soil bacteriome to a lesser degree than autoclaving but induced significant peach growth. Non-autoclaved and autoclaved soil bacteriomes were compared to highlight bacterial taxa promoted by soil disinfection prior to growing peaches. Differential abundance shows a loss of potentially beneficial bacteria due to soil disinfection. The treatment with the highest peach biomass was non-autoclaved soil with a cover crop history of alfalfa, corn, and tomato. Beneficial bacterial species that were cultivated exclusively in the peach rhizosphere of non-autoclaved soils with a cover crop history were Paenibacillus castaneae and Bellilinea caldifistulae. In summary, the non-autoclaved soils show continuous enhancement of beneficial bacteria at each cropping phase, culminating in an enriched rhizosphere which may help alleviate RS in peaches.
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Affiliation(s)
- Derek R Newberger
- Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA
| | - Ioannis S Minas
- Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA
| | - Daniel K Manter
- Agricultural Research Service, United States Department of Agriculture, Fort Collins, CO 80526, USA
| | - Jorge M Vivanco
- Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA
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Scandar S, Zadra C, Marcotullio MC. Coriander ( Coriandrum sativum) Polyphenols and Their Nutraceutical Value against Obesity and Metabolic Syndrome. Molecules 2023; 28:molecules28104187. [PMID: 37241925 DOI: 10.3390/molecules28104187] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 05/02/2023] [Accepted: 05/11/2023] [Indexed: 05/28/2023] Open
Abstract
Coriander is a widely used plant for its medicinal and biological properties. Both coriander essential oil and extracts are interesting sources of bioactive compounds and are widely used as spices in culinary practice due to their exclusive aroma and flavour. We focus our attention on coriander extracts that are rich in polyphenols. It is well known that plant polyphenols possess different biological activities and several functional foods contain this class of compounds. The polyphenol profile in an extract can be influenced by the plant part studied, the method of extraction and other parameters. This study performs a literature review using the words "coriander", "polyphenols" and "extraction" or "biological activity" in different databases such as PubMed, Google Scholar and Scopus. After that, we focus on the evidence of coriander polyphenols as protective agents against some inflammation-related diseases. Due to the bioactivities of coriander extract, this herb can be considered a valuable functional food against obesity, metabolic syndrome and diabetes.
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Affiliation(s)
- Samir Scandar
- Department of Pharmaceutical Sciences, University of Perugia, Via del Giochetto-Ed. B, 06122 Perugia, Italy
| | - Claudia Zadra
- Department of Pharmaceutical Sciences, University of Perugia, Via del Giochetto-Ed. B, 06122 Perugia, Italy
| | - Maria Carla Marcotullio
- Department of Pharmaceutical Sciences, University of Perugia, Via del Giochetto-Ed. B, 06122 Perugia, Italy
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8
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Tshikhudo PP, Ntushelo K, Mudau FN. Sustainable Applications of Endophytic Bacteria and Their Physiological/Biochemical Roles on Medicinal and Herbal Plants: Review. Microorganisms 2023; 11:microorganisms11020453. [PMID: 36838418 PMCID: PMC9967847 DOI: 10.3390/microorganisms11020453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Revised: 02/02/2023] [Accepted: 02/06/2023] [Indexed: 02/15/2023] Open
Abstract
Bacterial endophytes reside within the tissues of living plant species without causing any harm or disease to their hosts. These endophytes can be isolated, identified, characterized, and used as biofertilizers. Moreover, bacterial endophytes increase the plants' resistance against diseases, pests, and parasites, and are a promising source of pharmaceutically important bioactives. For instance, the production of antibiotics, auxins, biosurfactants, cytokinin's, ethylene, enzymes, gibberellins, nitric oxide organic acids, osmolytes, and siderophores is accredited to the existence of various bacterial strains. Thus, this manuscript intends to review the sustainable applications of endophytic bacteria to promote the growth, development, and chemical integrity of medicinal and herbal plants, as well as their role in plant physiology. The study of the importance of bacterial endophytes in the suppression of diseases in medicinal and herbal plants is crucial and a promising area of future investigation.
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Affiliation(s)
- Phumudzo Patrick Tshikhudo
- Department of Agriculture, Land Reform and Rural Development, Directorate Plant Health, Division Pest Risk Analysis, Arcadia, Pretoria 0001, South Africa
- Correspondence:
| | - Khayalethu Ntushelo
- Department of Agriculture and Animal Health, College of Agriculture and Environmental Sciences, University of South Africa, Private Bag X6, Florida 1710, South Africa
| | - Fhatuwani Nixwell Mudau
- School of Agricultural, Earth and Environmental Sciences, University of KwaZulu-Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa
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Guardiola-Márquez CE, Santos-Ramírez MT, Segura-Jiménez ME, Figueroa-Montes ML, Jacobo-Velázquez DA. Fighting Obesity-Related Micronutrient Deficiencies through Biofortification of Agri-Food Crops with Sustainable Fertilization Practices. PLANTS (BASEL, SWITZERLAND) 2022; 11:3477. [PMID: 36559589 PMCID: PMC9784404 DOI: 10.3390/plants11243477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Revised: 12/03/2022] [Accepted: 12/06/2022] [Indexed: 06/17/2023]
Abstract
Obesity is a critical medical condition worldwide that is increasingly involved with nutritional derangements associated with micronutrient deficiencies, including iron, zinc, calcium, magnesium, selenium, and vitamins A, C, D, and E. Nutritional deficiencies in obesity are mainly caused by poor-quality diets, higher nutrient requirements, alterations in micronutrient metabolism, and invasive obesity treatments. The current conventional agricultural system is designed for intensive food production, focusing on food quantity rather than food quality, consuming excessive agricultural inputs, and producing nutrient-deficient foods, thus generating severe health and environmental problems; agricultural food products may worsen obesity-related malnutrition. Therefore, modern agriculture is adopting new biofortification technologies to combat micronutrient deficiencies and improve agricultural productivity and sustainability. Biofertilization and nanofertilization practices are increasingly used due to their efficiency, safety, and reduced environmental impact. Biofertilizers are preparations of PGP-microorganisms that promote plant growth by influencing plant metabolism and improving the nutrient uptake, and nanofertilizers consist of synthesized nanoparticles with unique physicochemical properties that are capable of increasing plant nutrition and enriching agricultural products. This review presents the current micronutrient deficiencies associated with obesity, the modern unsustainable agri-food system contributing to obesity progression, and the development of bio- and nanofertilizers capable of biofortifying agri-food crops with micronutrients commonly deficient in patients with obesity.
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Affiliation(s)
| | - María Teresa Santos-Ramírez
- Tecnologico de Monterrey, Escuela de Ingenieria y Ciencias, Ave. General Ramon Corona 2514, Zapopan 45138, Jalisco, Mexico
| | - M. Eugenia Segura-Jiménez
- Tecnologico de Monterrey, Escuela de Ingenieria y Ciencias, Ave. General Ramon Corona 2514, Zapopan 45138, Jalisco, Mexico
| | - Melina Lizeth Figueroa-Montes
- Tecnologico de Monterrey, Escuela de Ingenieria y Ciencias, Ave. General Ramon Corona 2514, Zapopan 45138, Jalisco, Mexico
| | - Daniel A. Jacobo-Velázquez
- Tecnologico de Monterrey, Escuela de Ingenieria y Ciencias, Ave. General Ramon Corona 2514, Zapopan 45138, Jalisco, Mexico
- Tecnologico de Monterrey, The Institute for Obesity Research, Ave. General Ramon Corona 2514, Zapopan 45201, Jalisco, Mexico
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10
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Al-Tammar FK, Khalifa AYZ. Plant growth promoting bacteria drive food security. BRAZ J BIOL 2022; 82:e267257. [PMID: 36515299 DOI: 10.1590/1519-6984.267257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 11/04/2022] [Indexed: 12/14/2022] Open
Abstract
The essence of food security centers on ensuring availability and accessibility of foods in adequate amounts and quality for all populations at all times for an active and healthy life. Microorganisms are tiny bioreactors, which represent sustainable resources and promising approaches to bridging the gap between food production and consumption globally via various biotechnological applications. This review focuses on plant-growth promoting bacteria (PGPB) which exert their potential impacts on increasing soil fertility, plant growth, and productivity through a variety of processes, including direct, indirect, and synergistic mechanisms. PGPB plays a substantial role in accelerating nutrients' availability such as (N, P), producing phytohormones such as gibberellins, IAA, and bioactive compounds against biotic and abiotic stressors. Recent advances in PGPB will be addressed as a sustainable approach to satisfy global food demand.
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Affiliation(s)
- Fatimah K Al-Tammar
- King Faisal University, College of Science, Biological Sciences Department, Al-Ahsa, Saudi Arabia
| | - A Y Z Khalifa
- King Faisal University, College of Science, Biological Sciences Department, Al-Ahsa, Saudi Arabia.,Beni-Suef University, Faculty of Science, Botany and Microbiology Department, Beni-Suef, Egypt
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11
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Gonçalves AC, Sánchez-Juanes F, Meirinho S, Silva LR, Alves G, Flores-Félix JD. Insight into the Taxonomic and Functional Diversity of Bacterial Communities Inhabiting Blueberries in Portugal. Microorganisms 2022; 10:2193. [PMID: 36363783 PMCID: PMC9695653 DOI: 10.3390/microorganisms10112193] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 10/28/2022] [Accepted: 11/01/2022] [Indexed: 10/15/2023] Open
Abstract
Vaccinium myrtillus is a dwarf shrub of the Ericaceae family with a Palearctic distribution, associated with temperate and cold humid climates. It is widespread on the European continent; on the Iberian Peninsula it is located on Atlantic climate mountains and glacial relicts. In Portugal, we find scattered and interesting populations; however, the majority of them are threatened by climate change and wildfires. Given that, the objective of this study is to determine the rhizospheric and root bacterial communities of this plant in the southernmost regions, and, consequently, its potential range and ability to be used as a biofertilizer. In this work, metabarcoding of 16S rRNA gene showed that the endophytic bacterial diversity is dependent on the plant and selected by it according to the observed alpha and beta diversity. Moreover, a culturomic approach allowed 142 different strains to be isolated, some of them being putative new species. Additionally, some strains belonging to the genera Bacillus, Paenibacillus, Pseudomonas, Paraburkholderia, and Caballeronia showed significant potential to be applied as multifunctional biofertilizers since they present good plant growth-promoting (PGP) mechanisms, high colonization capacities, and an increase in vegetative parameters in blueberry and tomato plants.
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Affiliation(s)
- Ana C. Gonçalves
- CICS–UBI—Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
- CIBIT—Coimbra Institute for Biomedical Imaging and Translational Research, University of Coimbra, 3000-540 Coimbra, Portugal
| | - Fernando Sánchez-Juanes
- Instituto de Investigación Biomédica de Salamanca (IBSAL), Complejo Asistencial Universitario de Salamanca, Universidad de Salamanca, CSIC, 37007 Salamanca, Spain
- Departamento de Bioquímica y Biología Molecular, Universidad de Salamanca, 37007 Salamanca, Spain
| | - Sara Meirinho
- CICS–UBI—Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
| | - Luís R. Silva
- CICS–UBI—Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
- CPIRN-UDI/IPG—Center of Potential and Innovation of Natural Resources, Research Unit for Inland Development (UDI), Polytechnic Institute of Guarda, 6300-559 Guarda, Portugal
| | - Gilberto Alves
- CICS–UBI—Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
| | - José David Flores-Félix
- CICS–UBI—Health Sciences Research Centre, University of Beira Interior, 6201-506 Covilhã, Portugal
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12
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Fusco GM, Nicastro R, Rouphael Y, Carillo P. The Effects of the Microbial Biostimulants Approved by EU Regulation 2019/1009 on Yield and Quality of Vegetable Crops. Foods 2022; 11:2656. [PMID: 36076841 PMCID: PMC9455239 DOI: 10.3390/foods11172656] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Revised: 08/26/2022] [Accepted: 08/28/2022] [Indexed: 12/04/2022] Open
Abstract
The use of microbial biostimulants such as plant growth-promoting rhizobacteria (PGPB) and arbuscular mycorrhizal fungi (AMF) has gained popularity in recent years as a sustainable approach to boost yield as well as the quality of produce. The beneficial effects of microbial biostimulants have been reported numerous times. However, information is missing concerning quantitative assessment of the overall impact of microbial biostimulants on the yield and quality of vegetable crops. Here we provide for the first time a comprehensive, semi-systematic review of the effects of microbial biostimulants allowed by Regulation (EU) 2019/1009, including microorganisms belonging to the AMF (phylum Glomeromycota), or to Azospirillum, Azotobacter and Rhizobium genera, on vegetable crops' quality and yield, with rigorous inclusion and exclusion criteria based on the PRISMA method. We identified, selected and critically evaluated all the relevant research studies from 2010 onward in order to provide a critical appraisal of the most recent findings related to these EU-allowed microbial biostimulants and their effects on vegetable crops' quality and yield. Moreover, we highlighted which vegetable crops received more beneficial effects from specific microbial biostimulants and the protocols employed for plant inoculation. Our study is intended to draw more attention from the scientific community to this important instrument to produce nutrient-dense vegetables in a sustainable manner. Finally, our semi-systematic review provides important microbial biostimulant application guidelines and gives extension specialists and vegetable growers insights into achieving an additional benefit from microbial biostimulant application.
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Affiliation(s)
- Giovanna Marta Fusco
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania “Luigi Vanvitelli”, Via Vivaldi 43, 81100 Caserta, Italy
| | - Rosalinda Nicastro
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania “Luigi Vanvitelli”, Via Vivaldi 43, 81100 Caserta, Italy
| | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Portici, Italy
| | - Petronia Carillo
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania “Luigi Vanvitelli”, Via Vivaldi 43, 81100 Caserta, Italy
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13
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Xiao X, Li J, Lyu J, Hu L, Wu Y, Tang Z, Yu J, Calderón-Urrea A. Grafting-enhanced tolerance of cucumber to toxic stress is associated with regulation of phenolic and other aromatic acids metabolism. PeerJ 2022; 10:e13521. [PMID: 35669966 PMCID: PMC9166682 DOI: 10.7717/peerj.13521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 05/09/2022] [Indexed: 01/17/2023] Open
Abstract
Toxic stress caused by autotoxins is a common phenomenon for cucumber under monoculture condition. A previous study demonstrated that grafting could enhance the resistance of cucumber to cinnamic acid (CA) stress, but the underlying mechanism behind this enhanced resistance is still unclear. In the present study, we reconfirmed the stronger resistance of grafted rootstock (RG) compared to the non-grafted (NG) cucumber as measured though plant biomass accumulation. In addition, we focused on the phenolic and other aromatic acids metabolism in hydroponic culture model system using a combination of qRT-PCR (to measure gene expression of relevant genes) and HPLC (to detect the presence of phenolic and other aromatic acids). The results showed that the exogenous CA lead to the expression of four enzymes involved in phenolic and other aromatic acids biosynthesis, and a larger increase was observed in grafted rootstock (RG). Specifically, expression of six genes, involved in phenolic and other aromatic acids biosynthesis (PAL, PAL1, C4H, 4CL1, 4CL2 and COMT), with the exception of 4CL2, were significantly up-regulated in RG but down-regulated in NG when exposed to CA. Furthermore, six kinds of phenolic and other aromatic acids were detected in leaves and roots of NG and RG cucumber, while only benzoic acid and cinnamic acid were detected in root exudate of all samples. The CA treatment resulted in an increase of p-hydroxybenzonic acid, benzoic acid and cinnamic acid contents in RG cucumber, but decrease of p-coumaric acid and sinapic acid contents in NG cucumber. Surprisingly, the type and amount of phenolic and other aromatic acids in root exudate was improved by exogenous CA, particularly for RG cucumber. These results suggest that a possible mechanism for the stronger resistance to CA of RG than NG cucumber could involve the up-regulation of key genes involved in phenolic and other aromatic acids metabolism, and that the excessive phenolic compounds released to surroundings is a result of the accumulation of phenolic compounds in a short time by the plant under stress.
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Affiliation(s)
- Xuemei Xiao
- State Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, China,College of Horticulture, Gansu Agricultural University, Lanzhou, China
| | - Ju Li
- College of Horticulture, Gansu Agricultural University, Lanzhou, China
| | - Jian Lyu
- College of Horticulture, Gansu Agricultural University, Lanzhou, China
| | - Linli Hu
- College of Horticulture, Gansu Agricultural University, Lanzhou, China
| | - Yue Wu
- College of Horticulture, Gansu Agricultural University, Lanzhou, China
| | - Zhongqi Tang
- College of Horticulture, Gansu Agricultural University, Lanzhou, China
| | - Jihua Yu
- State Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, China,College of Horticulture, Gansu Agricultural University, Lanzhou, China
| | - Alejandro Calderón-Urrea
- College of Plant Protection, Gansu Agricultural University, Lanzhou, China,Department of Biology, College of Science and Mathematics, California State University, Fresno, CA, USA
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14
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Gupta A, Mishra R, Rai S, Bano A, Pathak N, Fujita M, Kumar M, Hasanuzzaman M. Mechanistic Insights of Plant Growth Promoting Bacteria Mediated Drought and Salt Stress Tolerance in Plants for Sustainable Agriculture. Int J Mol Sci 2022; 23:3741. [PMID: 35409104 PMCID: PMC8998651 DOI: 10.3390/ijms23073741] [Citation(s) in RCA: 37] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Revised: 03/25/2022] [Accepted: 03/26/2022] [Indexed: 12/17/2022] Open
Abstract
Climate change has devastating effects on plant growth and yield. During ontogenesis, plants are subjected to a variety of abiotic stresses, including drought and salinity, affecting the crop loss (20-50%) and making them vulnerable in terms of survival. These stresses lead to the excessive production of reactive oxygen species (ROS) that damage nucleic acid, proteins, and lipids. Plant growth-promoting bacteria (PGPB) have remarkable capabilities in combating drought and salinity stress and improving plant growth, which enhances the crop productivity and contributes to food security. PGPB inoculation under abiotic stresses promotes plant growth through several modes of actions, such as the production of phytohormones, 1-aminocyclopropane-1-carboxylic acid deaminase, exopolysaccharide, siderophore, hydrogen cyanide, extracellular polymeric substances, volatile organic compounds, modulate antioxidants defense machinery, and abscisic acid, thereby preventing oxidative stress. These bacteria also provide osmotic balance; maintain ion homeostasis; and induce drought and salt-responsive genes, metabolic reprogramming, provide transcriptional changes in ion transporter genes, etc. Therefore, in this review, we summarize the effects of PGPB on drought and salinity stress to mitigate its detrimental effects. Furthermore, we also discuss the mechanistic insights of PGPB towards drought and salinity stress tolerance for sustainable agriculture.
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Affiliation(s)
- Anmol Gupta
- IIRC-3, Plant–Microbe Interaction and Molecular Immunology Laboratory, Department of Biosciences, Faculty of Science, Integral University, Lucknow 226026, Uttar Pradesh, India; (A.G.); (S.R.); (A.B.)
| | - Richa Mishra
- Department of Biochemistry, Dr. Rammanohar Lohia Avadh University, Ayodhya 224123, Uttar Pradesh, India; (R.M.); (N.P.)
| | - Smita Rai
- IIRC-3, Plant–Microbe Interaction and Molecular Immunology Laboratory, Department of Biosciences, Faculty of Science, Integral University, Lucknow 226026, Uttar Pradesh, India; (A.G.); (S.R.); (A.B.)
| | - Ambreen Bano
- IIRC-3, Plant–Microbe Interaction and Molecular Immunology Laboratory, Department of Biosciences, Faculty of Science, Integral University, Lucknow 226026, Uttar Pradesh, India; (A.G.); (S.R.); (A.B.)
| | - Neelam Pathak
- Department of Biochemistry, Dr. Rammanohar Lohia Avadh University, Ayodhya 224123, Uttar Pradesh, India; (R.M.); (N.P.)
| | - Masayuki Fujita
- Laboratory of Plant Stress Responses, Faculty of Agriculture, Kagawa University, Kagawa 761-0795, Japan
| | - Manoj Kumar
- Institute of Plant Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion 7505101, Israel
| | - Mirza Hasanuzzaman
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh
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15
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Del Mondo A, Sansone C, Brunet C. Insights into the biosynthesis pathway of phenolic compounds in microalgae. Comput Struct Biotechnol J 2022; 20:1901-1913. [PMID: 35521550 PMCID: PMC9052079 DOI: 10.1016/j.csbj.2022.04.019] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Revised: 04/04/2022] [Accepted: 04/14/2022] [Indexed: 01/18/2023] Open
Abstract
Microalgal PCs are important bioactive molecules beneficial for human health. Bioinformatic comparative exploration predicts PCs synthesis in microalgae. Ten groups of prokaryotic and eukaryotic microalgae reveal a conserved pathway core. Featured PCs can be restricted to diverse microalgae due to ecological implications.
Among the most relevant bioactive molecules family, phenolic compounds (PCs) are well known in higher plants, while their knowledge in microalgae is still scarce. Microalgae represent a novel and promising source of human health benefit compounds to be involved, for instance, in nutraceutical composition. This study aims to investigate the PCs biosynthetic pathway in the microalgal realm, exploring its potential variability over the microalgal biodiversity axis. A multistep in silico analysis was carried out using a selection of core enzymes from the pathway described in land plants. This study explores their presence in ten groups of prokaryotic and eukaryotic microalgae.. Analyses were carried out taking into account a wide selection of algal protein homologs, functional annotation of conserved domains and motifs, and maximum-likelihood tree construction. Results showed that a conserved core of the pathway for PCs biosynthesis is shared horizontally in all microalgae. Conversely, the ability to synthesize some subclasses of phenolics may be restricted to only some microalgal groups (i.e., Chlorophyta) depending on featured enzymes, such as the flavanone naringenin and other related chalcone isomerase dependent compounds.
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Affiliation(s)
- Angelo Del Mondo
- Stazione zoologica Anton Dohrn, sede Molosiglio Marina Acton, via ammiraglio F. Acton, 55., 80133 Napoli, Italy
- Corresponding author.
| | - Clementina Sansone
- Stazione zoologica Anton Dohrn, sede Molosiglio Marina Acton, via ammiraglio F. Acton, 55., 80133 Napoli, Italy
- Institute of Biomolecular Chemistry, CNR, via Campi Flegrei 34, Pozzuoli 80078, Na, Italy
| | - Christophe Brunet
- Stazione zoologica Anton Dohrn, sede Molosiglio Marina Acton, via ammiraglio F. Acton, 55., 80133 Napoli, Italy
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16
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Garduño-Félix KG, Ramirez K, Salazar-Salas NY, Amabilis-Sosa LE, Rochín-Medina JJ. Phenolic profile in black sesame sprouts biostimulated with Bacillus clausii. JOURNAL OF FOOD MEASUREMENT AND CHARACTERIZATION 2021. [DOI: 10.1007/s11694-021-01115-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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17
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Roy S, Chakraborty AP, Chakraborty R. Understanding the potential of root microbiome influencing salt-tolerance in plants and mechanisms involved at the transcriptional and translational level. PHYSIOLOGIA PLANTARUM 2021; 173:1657-1681. [PMID: 34549441 DOI: 10.1111/ppl.13570] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Revised: 09/10/2021] [Accepted: 09/20/2021] [Indexed: 06/13/2023]
Abstract
Soil salinity severely affects plant growth and development and imparts inevitable losses to crop productivity. Increasing the concentration of salts in the vicinity of plant roots has severe consequences at the morphological, biochemical, and molecular levels. These include loss of chlorophyll, decrease in photosynthetic rate, reduction in cell division, ROS generation, inactivation of antioxidative enzymes, alterations in phytohormone biosynthesis and signaling, and so forth. The association of microorganisms, viz. plant growth-promoting rhizobacteria, endophytes, and mycorrhiza, with plant roots constituting the root microbiome can confer a greater degree of salinity tolerance in addition to their inherent ability to promote growth and induce defense mechanisms. The mechanisms involved in induced stress tolerance bestowed by these microorganisms involve the modulation of phytohormone biosynthesis and signaling pathways (including indole acetic acid, gibberellic acid, brassinosteroids, abscisic acid, and jasmonic acid), accumulation of osmoprotectants (proline, glycine betaine, and sugar alcohols), and regulation of ion transporters (SOS1, NHX, HKT1). Apart from this, salt-tolerant microorganisms are known to induce the expression of salt-responsive genes via the action of several transcription factors, as well as by posttranscriptional and posttranslational modifications. Moreover, the potential of these salt-tolerant microflora can be employed for sustainably improving crop performance in saline environments. Therefore, this review will briefly focus on the key responses of plants under salinity stress and elucidate the mechanisms employed by the salt-tolerant microorganisms in improving plant tolerance under saline environments.
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Affiliation(s)
- Swarnendu Roy
- Plant Biochemistry Laboratory, Department of Botany, University of North Bengal, Darjeeling, West Bengal, India
| | | | - Rakhi Chakraborty
- Department of Botany, Acharya Prafulla Chandra Roy Government College, Darjeeling, West Bengal, India
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18
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Jiménez-Gómez A, García-Estévez I, Escribano-Bailón MT, García-Fraile P, Rivas R. Bacterial Fertilizers Based on Rhizobium laguerreae and Bacillus halotolerans Enhance Cichorium endivia L. Phenolic Compound and Mineral Contents and Plant Development. Foods 2021; 10:foods10020424. [PMID: 33671987 PMCID: PMC7919373 DOI: 10.3390/foods10020424] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Revised: 02/10/2021] [Accepted: 02/12/2021] [Indexed: 11/16/2022] Open
Abstract
Today there is an urgent need to find new ways to satisfy the current and growing food demand and to maintain crop protection and food safety. One of the most promising changes is the replacement of chemical fertilizers with biofertilizers, which include plant root-associated beneficial bacteria. This work describes and shows the use of B. halotolerans SCCPVE07 and R. laguerreae PEPV40 strains as efficient biofertilizers for escarole crops, horticultural species that are widely cultivated. An in silico genome study was performed where coding genes related to plant growth promoting (PGP) mechanisms or different enzymes implicated in the metabolism of phenolic compounds were identified. An efficient bacterial root colonization process was also analyzed through fluorescence microscopy. SCCPVE07 and PEPV40 promote plant development under normal conditions and saline stress. Moreover, inoculated escarole plants showed not only an increase in potassium, iron and magnesium content but also a significant improvement in protocatechuic acid, caffeic acid or kaempferol 3-O-glucuronide plant content. Our results show for the first time the beneficial effects in plant development and the food quality of escarole crops and highlight a potential and hopeful change in the current agricultural system even under saline stress, one of the major non-biological stresses.
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Affiliation(s)
- Alejandro Jiménez-Gómez
- Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental de Biología, 37007 Salamanca, Spain; (P.G.-F.); (R.R.)
- Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain
- Correspondence:
| | - Ignacio García-Estévez
- Grupo de Investigación en Polifenoles (GIP), Departamento de Química Analítica, Nutrición y Bromatología, Faculty of Pharmacy, Universidad de Salamanca, 37007 Salamanca, Spain; (I.G.-E.); (M.T.E.-B.)
| | - M. Teresa Escribano-Bailón
- Grupo de Investigación en Polifenoles (GIP), Departamento de Química Analítica, Nutrición y Bromatología, Faculty of Pharmacy, Universidad de Salamanca, 37007 Salamanca, Spain; (I.G.-E.); (M.T.E.-B.)
| | - Paula García-Fraile
- Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental de Biología, 37007 Salamanca, Spain; (P.G.-F.); (R.R.)
- Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain
| | - Raúl Rivas
- Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental de Biología, 37007 Salamanca, Spain; (P.G.-F.); (R.R.)
- Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain
- Associated Unit USAL-CSIC (IRNASA), 37008 Salamanca, Spain
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19
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Effect of Bacillus spp. and Brevibacillus sp. on the Photosynthesis and Redox Status of Solanum lycopersicum. HORTICULTURAE 2021. [DOI: 10.3390/horticulturae7020024] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Plant-growth-promoting bacteria (PGPB) are gaining attention as a sustainable alternative to current agrochemicals. This study evaluated the impact of three Bacillus spp. (5PB1, 1PB1, FV46) and one Brevibacillus sp. (C9F) on the important crop tomato (Solanum lycopersicum) using the model cv. ‘MicroTom’. The effects of these isolates were assessed on (a) seedlings’ growth and vigor, and (b) adult potted plants. In potted plants, several photosynthetic parameters (chlorophylls (a and b), carotenoids and anthocyanins contents, transpiration rate, stomatal conductance, net CO2 photosynthetic rate, and intercellular CO2 concentration, and on chlorophyll fluorescence yields of light- and dark-adapted leaves)), as well as soluble sugars and starch contents, were quantified. Additionally, the effects on redox status were evaluated. While the growth of seedlings was, overall, not influenced by the strains, some effects were observed on adult plants. The Bacillus safensis FV46 stimulated the content of pigments, compared to C9F. Bacillus zhangzhouensis 5PB1 increased starch levels and was positively correlated with some parameters of the photophosphorylation and the gas exchange phases. Interestingly, Bacillus megaterium 1PB1 decreased superoxide (O2−) content, and B. safensis FV46 promoted non-enzymatic antioxidant defenses, increasing total phenol content levels. These results, conducted on a model cultivar, support the theory that these isolates differently act on tomato plant physiology, and that their activity depends on the age of the plant, and may differently influence photosynthesis. It would now be interesting to analyze the influence of these bacteria using commercial cultivars.
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Ayuso-Calles M, García-Estévez I, Jiménez-Gómez A, Flores-Félix JD, Escribano-Bailón MT, Rivas R. Rhizobium laguerreae Improves Productivity and Phenolic Compound Content of Lettuce ( Lactuca sativa L.) under Saline Stress Conditions. Foods 2020; 9:foods9091166. [PMID: 32847018 PMCID: PMC7555320 DOI: 10.3390/foods9091166] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 08/19/2020] [Accepted: 08/20/2020] [Indexed: 11/27/2022] Open
Abstract
Lettuce (Lactuca sativa L.) is a widely consumed horticultural species. Its significance lies in a high polyphenolic compound content, including phenolic acids and flavonols. In this work, we have probed the ability of Rhizobium laguerreae HUTR05 to promote lettuce growth, under in vitro and greenhouse conditions (both non-saline and saline conditions). This strain has shown several in vitro plant growth promotion mechanisms, as well as capacity to colonize lettuce seedlings roots. We have analyzed the effect of the rhizobacterium inoculation on mineral and bioactive compounds in lettuce, under greenhouse conditions, and found a rise in the content of certain phenolic acids and flavonoids, such as derivatives of caffeoyl acid and quercetin. The genome analysis of the strain has shown the presence of genes related to plant growth-promoting rhizobacteria (PGPR) mechanisms, defense from saline stress, and phenolic compound metabolism (such as naringenin-chalcone synthase or phenylalanine aminotransferase).
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Affiliation(s)
- Miguel Ayuso-Calles
- Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental de Biología, 37007 Salamanca, Spain; (M.A.-C.); (J.D.F.-F.); (R.R.)
- Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain
| | - Ignacio García-Estévez
- Grupo de Investigación en Polifenoles (GIP), Departamento de Química Analítica, Nutrición y Bromatología, Facultad de Farmacia, Universidad de Salamanca, 37007 Salamanca, Spain; (I.G.-E.); (M.T.E.-B.)
| | - Alejandro Jiménez-Gómez
- Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental de Biología, 37007 Salamanca, Spain; (M.A.-C.); (J.D.F.-F.); (R.R.)
- Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain
- Correspondence: ; Tel.: +34-923294500 (ext. 1919)
| | - José D. Flores-Félix
- Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental de Biología, 37007 Salamanca, Spain; (M.A.-C.); (J.D.F.-F.); (R.R.)
- Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain
| | - M. Teresa Escribano-Bailón
- Grupo de Investigación en Polifenoles (GIP), Departamento de Química Analítica, Nutrición y Bromatología, Facultad de Farmacia, Universidad de Salamanca, 37007 Salamanca, Spain; (I.G.-E.); (M.T.E.-B.)
| | - Raúl Rivas
- Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental de Biología, 37007 Salamanca, Spain; (M.A.-C.); (J.D.F.-F.); (R.R.)
- Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain
- Associated Unit University of Salamanca CSIC (IRNASA), 37008 Salamanca, Spain
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21
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Menéndez E, Paço A. Is the Application of Plant Probiotic Bacterial Consortia Always Beneficial for Plants? Exploring Synergies between Rhizobial and Non-Rhizobial Bacteria and Their Effects on Agro-Economically Valuable Crops. Life (Basel) 2020; 10:E24. [PMID: 32178383 PMCID: PMC7151578 DOI: 10.3390/life10030024] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Revised: 03/03/2020] [Accepted: 03/09/2020] [Indexed: 12/13/2022] Open
Abstract
The overgrowth of human population and the demand for high-quality foods necessitate the search for sustainable alternatives to increase crop production. The use of biofertilizers, mostly based on plant probiotic bacteria (PPB), represents a reliable and eco-friendly solution. This heterogeneous group of bacteria possesses many features with positive effects on plants; however, how these bacteria with each other and with the environment when released into a field has still barely been studied. In this review, we focused on the diversity of root endophytic rhizobial and non-rhizobial bacteria existing within plant root tissues, and also on their potential applications as consortia exerting benefits for plants and the environment. We demonstrated the benefits of using bacterial inoculant consortia instead of single-strain inoculants. We then critically discussed several considerations that farmers, companies, governments, and the scientific community should take into account when a biofertilizer based on those PPBs is proposed, including (i) a proper taxonomic identification, (ii) the characterization of the beneficial features of PPB strains, and (iii) the ecological impacts on plants, environment, and plant/soil microbiomes. Overall, the success of a PPB consortium depends on many factors that must be considered and analyzed before its application as a biofertilizer in an agricultural system.
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Affiliation(s)
- Esther Menéndez
- MED—Mediterranean Institute for Agriculture, Environment and Development, Institute for Advanced Studies and Research (IIFA), University of Évora, Pólo da Mitra, Ap. 94, 7006-554 Évora, Portugal;
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