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Quanyang W, Yao H, Sicong W, Linlin Q, Zewei Z, Donghui H, Hongjia L, Shijun Z. Artificial intelligence in lung cancer screening: Detection, classification, prediction, and prognosis. Cancer Med 2024; 13:e7140. [PMID: 38581113 PMCID: PMC10997848 DOI: 10.1002/cam4.7140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Revised: 03/15/2024] [Accepted: 03/16/2024] [Indexed: 04/08/2024] Open
Abstract
BACKGROUND The exceptional capabilities of artificial intelligence (AI) in extracting image information and processing complex models have led to its recognition across various medical fields. With the continuous evolution of AI technologies based on deep learning, particularly the advent of convolutional neural networks (CNNs), AI presents an expanded horizon of applications in lung cancer screening, including lung segmentation, nodule detection, false-positive reduction, nodule classification, and prognosis. METHODOLOGY This review initially analyzes the current status of AI technologies. It then explores the applications of AI in lung cancer screening, including lung segmentation, nodule detection, and classification, and assesses the potential of AI in enhancing the sensitivity of nodule detection and reducing false-positive rates. Finally, it addresses the challenges and future directions of AI in lung cancer screening. RESULTS AI holds substantial prospects in lung cancer screening. It demonstrates significant potential in improving nodule detection sensitivity, reducing false-positive rates, and classifying nodules, while also showing value in predicting nodule growth and pathological/genetic typing. CONCLUSIONS AI offers a promising supportive approach to lung cancer screening, presenting considerable potential in enhancing nodule detection sensitivity, reducing false-positive rates, and classifying nodules. However, the universality and interpretability of AI results need further enhancement. Future research should focus on the large-scale validation of new deep learning-based algorithms and multi-center studies to improve the efficacy of AI in lung cancer screening.
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Affiliation(s)
- Wu Quanyang
- Department of Diagnostic RadiologyNational Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijingChina
| | - Huang Yao
- Department of Diagnostic RadiologyNational Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijingChina
| | - Wang Sicong
- Magnetic Resonance Imaging ResearchGeneral Electric Healthcare (China)BeijingChina
| | - Qi Linlin
- Department of Diagnostic RadiologyNational Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijingChina
| | - Zhang Zewei
- PET‐CT CenterNational Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijingChina
| | - Hou Donghui
- Department of Diagnostic RadiologyNational Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijingChina
| | - Li Hongjia
- PET‐CT CenterNational Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijingChina
| | - Zhao Shijun
- Department of Diagnostic RadiologyNational Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijingChina
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Chen Y, Hou X, Yang Y, Ge Q, Zhou Y, Nie S. A Novel Deep Learning Model Based on Multi-Scale and Multi-View for Detection of Pulmonary Nodules. J Digit Imaging 2023; 36:688-699. [PMID: 36544067 PMCID: PMC10039158 DOI: 10.1007/s10278-022-00749-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 11/03/2022] [Accepted: 12/02/2022] [Indexed: 12/24/2022] Open
Abstract
Lung cancer manifests as pulmonary nodules in the early stage. Thus, the early and accurate detection of these nodules is crucial for improving the survival rate of patients. We propose a novel two-stage model for lung nodule detection. In the candidate nodule detection stage, a deep learning model based on 3D context information roughly segments the nodules detects the preprocessed image and obtain candidate nodules. In this model, 3D image blocks are input into the constructed model, and it learns the contextual information between the various slices in the 3D image block. The parameters of our model are equivalent to those of a 2D convolutional neural network (CNN), but the model could effectively learn the 3D context information of the nodules. In the false-positive reduction stage, we propose a multi-scale shared convolutional structure model. Our lung detection model has no significant increase in parameters and computation in both stages of multi-scale and multi-view detection. The proposed model was evaluated by using 888 computed tomography (CT) scans from the LIDC-IDRI dataset and achieved a competition performance metric (CPM) score of 0.957. The average detection sensitivity per scan was 0.971/1.0 FP. Furthermore, an average detection sensitivity of 0.933/1.0 FP per scan was achieved based on data from Shanghai Pulmonary Hospital. Our model exhibited a higher detection sensitivity, a lower false-positive rate, and better generalization than current lung nodule detection methods. The method has fewer parameters and less computational complexity, which provides more possibilities for the clinical application of this method.
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Affiliation(s)
- Yang Chen
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China
| | - Xuewen Hou
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China
| | - Yifeng Yang
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China
| | - Qianqian Ge
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China
| | - Yan Zhou
- Department of Radiology, School of Medicine, Renji Hospital, Shanghai Jiao Tong University, Shanghai, 200127, China.
| | - Shengdong Nie
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China.
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He T, Liu H, Zhang Z, Li C, Zhou Y. Research on the Application of Artificial Intelligence in Public Health Management: Leveraging Artificial Intelligence to Improve COVID-19 CT Image Diagnosis. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2023; 20:1158. [PMID: 36673913 PMCID: PMC9858906 DOI: 10.3390/ijerph20021158] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2022] [Revised: 12/26/2022] [Accepted: 01/02/2023] [Indexed: 05/31/2023]
Abstract
Since the start of 2020, the outbreak of the Coronavirus disease (COVID-19) has been a global public health emergency, and it has caused unprecedented economic and social disaster. In order to improve the diagnosis efficiency of COVID-19 patients, a number of researchers have conducted extensive studies on applying artificial intelligence techniques to the analysis of COVID-19-related medical images. The automatic segmentation of lesions from computed tomography (CT) images using deep learning provides an important basis for the quantification and diagnosis of COVID-19 cases. For a deep learning-based CT diagnostic method, a few of accurate pixel-level labels are essential for the training process of a model. However, the translucent ground-glass area of the lesion usually leads to mislabeling while performing the manual labeling operation, which weakens the accuracy of the model. In this work, we propose a method for correcting rough labels; that is, to hierarchize these rough labels into precise ones by performing an analysis on the pixel distribution of the infected and normal areas in the lung. The proposed method corrects the incorrectly labeled pixels and enables the deep learning model to learn the infected degree of each infected pixel, with which an aiding system (named DLShelper) for COVID-19 CT image diagnosis using the hierarchical labels is also proposed. The DLShelper targets lesion segmentation from CT images, as well as the severity grading. The DLShelper assists medical staff in efficient diagnosis by providing rich auxiliary diagnostic information (including the severity grade, the proportions of the lesion and the visualization of the lesion area). A comprehensive experiment based on a public COVID-19 CT image dataset is also conducted, and the experimental results show that the DLShelper significantly improves the accuracy of segmentation for the lesion areas and also achieves a promising accuracy for the severity grading task.
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Affiliation(s)
- Tiancheng He
- Department of Political Party and State Governance, East China University of Political Science and Law, Shanghai 201620, China
| | - Hong Liu
- Department of Political Party and State Governance, East China University of Political Science and Law, Shanghai 201620, China
- Teacher Work Department of the Party Committee, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China
| | - Zhihao Zhang
- College of Computer Science and Technology, Shanghai University of Electric Power, Shanghai 200090, China
| | - Chao Li
- Department of Computer Science, Zhijiang College of Zhejiang University of Technology, Hangzhou 310024, China
| | - Youmei Zhou
- Department of Landscape Architecture, College of Architecture and Urban Planning, Tongji University, Shanghai 200092, China
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Jin H, Yu C, Gong Z, Zheng R, Zhao Y, Fu Q. Machine learning techniques for pulmonary nodule computer-aided diagnosis using CT images: A systematic review. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2022.104104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Can quantitative peritumoral CT radiomics features predict the prognosis of patients with non-small cell lung cancer? A systematic review. Eur Radiol 2023; 33:2105-2117. [PMID: 36307554 PMCID: PMC9935659 DOI: 10.1007/s00330-022-09174-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 08/20/2022] [Accepted: 09/16/2022] [Indexed: 11/04/2022]
Abstract
OBJECTIVES To provide an overarching evaluation of the value of peritumoral CT radiomics features for predicting the prognosis of non-small cell lung cancer and to assess the quality of the available studies. METHODS The PubMed, Embase, Web of Science, and Cochrane Library databases were searched for studies predicting the prognosis in patients with non-small cell lung cancer (NSCLC) using CT-based peritumoral radiomics features. Information about the patient, CT-scanner, and radiomics analyses were all extracted for the included studies. Study quality was assessed using the Radiomics Quality Score (RQS) and the Prediction Model Risk of Bias Assessment Tool (PROBAST). RESULTS Thirteen studies were included with 2942 patients from 2017 to 2022. Only one study was prospective, and the others were all retrospectively designed. Manual segmentation and multicenter studies were performed by 69% and 46% of the included studies, respectively. 3D-Slicer and MATLAB software were most commonly used for the segmentation of lesions and extraction of features. The peritumoral region was most frequently defined as dilated from the tumor boundary of 15 mm, 20 mm, or 30 mm. The median RQS of the studies was 13 (range 4-19), while all of included studies were assessed as having a high risk of bias (ROB) overall. CONCLUSIONS Peritumoral radiomics features based on CT images showed promise in predicting the prognosis of NSCLC, although well-designed studies and further biological validation are still needed. KEY POINTS • Peritumoral radiomics features based on CT images are promising and encouraging for predicting the prognosis of non-small cell lung cancer. • The peritumoral region was often dilated from the tumor boundary of 15 mm or 20 mm because these were considered safe margins. • The median Radiomics Quality Score of the included studies was 13 (range 4-19), and all of studies were considered to have a high risk of bias overall.
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Lin FY, Chang YC, Huang HY, Li CC, Chen YC, Chen CM. A radiomics approach for lung nodule detection in thoracic CT images based on the dynamic patterns of morphological variation. Eur Radiol 2022; 32:3767-3777. [PMID: 35020016 DOI: 10.1007/s00330-021-08456-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Revised: 09/20/2021] [Accepted: 11/02/2021] [Indexed: 11/28/2022]
Abstract
OBJECTIVES To propose and evaluate a set of radiomic features, called morphological dynamics features, for pulmonary nodule detection, which were rooted in the dynamic patterns of morphological variation and needless precise lesion segmentation. MATERIALS AND METHODS Two datasets were involved, namely, university hospital (UH) and LIDC datasets, comprising 72 CT scans (360 nodules) and 888 CT scans (2230 nodules), respectively. Each nodule was annotated by multiple radiologists. Denoted the category of nodules identified by at least k radiologists as ALk. A nodule detection algorithm, called CAD-MD algorithm, was proposed based on the morphological dynamics radiomic features, characterizing a lesion by ten sets of the same features with different values extracted from ten different thresholding results. Each nodule candidate was classified by a two-level classifier, including ten decision trees and a random forest, respectively. The CAD-MD algorithm was compared with a deep learning approach, the N-Net, using the UH dataset. RESULTS On the AL1 and AL2 of the UH dataset, the AUC of the AFROC curves were 0.777 and 0.851 for the CAD-MD algorithm and 0.478 and 0.472 for the N-Net, respectively. The CAD-MD algorithm achieved the sensitivities of 84.4% and 91.4% with 2.98 and 3.69 FPs/scan and the N-Net 74.4% and 80.7% with 3.90 and 4.49 FPs/scan, respectively. On the LIDC dataset, the CAD-MD algorithm attained the sensitivities of 87.6%, 89.2%, 92.2%, and 95.0% with 4 FPs/scan for AL1-AL4, respectively. CONCLUSION The morphological dynamics radiomic features might serve as an effective set of radiomic features for lung nodule detection. KEY POINTS • Texture features varied with such CT system settings as reconstruction kernels of CT images, CT scanner models, and parameter settings, and so on. • Shape and first-order statistics were shown to be the most robust features against variation in CT imaging parameters. • The morphological dynamics radiomic features, which mainly characterized the dynamic patterns of morphological variation, were shown to be effective for lung nodule detection.
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Affiliation(s)
- Fan-Ya Lin
- Department of Biomedical Engineering, College of Medicine and College of Engineering, National Taiwan University, No. 1, Sec. 1, Jen-Ai Road, Taipei, 100, Taiwan
| | - Yeun-Chung Chang
- Department of Medical Imaging, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei, Taiwan
| | | | - Chia-Chen Li
- Department of Biomedical Engineering, College of Medicine and College of Engineering, National Taiwan University, No. 1, Sec. 1, Jen-Ai Road, Taipei, 100, Taiwan
| | - Yi-Chang Chen
- Department of Biomedical Engineering, College of Medicine and College of Engineering, National Taiwan University, No. 1, Sec. 1, Jen-Ai Road, Taipei, 100, Taiwan.,Department of Medical Imaging, Cardinal Tien Hospital, New Taipei City, Taiwan
| | - Chung-Ming Chen
- Department of Biomedical Engineering, College of Medicine and College of Engineering, National Taiwan University, No. 1, Sec. 1, Jen-Ai Road, Taipei, 100, Taiwan.
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Chen L, Liu K, Shen H, Ye H, Liu H, Yu L, Li J, Zhao K, Zhu W. Multi-Modality Attention-Guided Three-Dimensional Detection of Non-Small Cell Lung Cancer in 18F-FDG PET/CT Images. IEEE TRANSACTIONS ON RADIATION AND PLASMA MEDICAL SCIENCES 2022. [DOI: 10.1109/trpms.2021.3072064] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Yang R, Chen Y, Sa G, Li K, Hu H, Zhou J, Guan Q, Chen F. CT classification model of pancreatic serous cystic neoplasms and mucinous cystic neoplasms based on a deep neural network. Abdom Radiol (NY) 2022; 47:232-241. [PMID: 34636931 PMCID: PMC8776667 DOI: 10.1007/s00261-021-03230-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Revised: 07/25/2021] [Accepted: 07/26/2021] [Indexed: 11/25/2022]
Abstract
BACKGROUND At present, numerous challenges exist in the diagnosis of pancreatic SCNs and MCNs. After the emergence of artificial intelligence (AI), many radiomics research methods have been applied to the identification of pancreatic SCNs and MCNs. PURPOSE A deep neural network (DNN) model termed Multi-channel-Multiclassifier-Random Forest-ResNet (MMRF-ResNet) was constructed to provide an objective CT imaging basis for differential diagnosis between pancreatic serous cystic neoplasms (SCNs) and mucinous cystic neoplasms (MCNs). MATERIALS AND METHODS This study is a retrospective analysis of pancreatic unenhanced and enhanced CT images in 63 patients with pancreatic SCNs and 47 patients with MCNs (3 of which were mucinous cystadenocarcinoma) confirmed by pathology from December 2010 to August 2016. Different image segmented methods (single-channel manual outline ROI image and multi-channel image), feature extraction methods (wavelet, LBP, HOG, GLCM, Gabor, ResNet, and AlexNet) and classifiers (KNN, Softmax, Bayes, random forest classifier, and Majority Voting rule method) are used to classify the nature of the lesion in each CT image (SCNs/MCNs). Then, the comparisons of classification results were made based on sensitivity, specificity, precision, accuracy, F1 score, and area under the receiver operating characteristic curve (AUC), with pathological results serving as the gold standard. RESULTS Multi-channel-ResNet (AUC 0.98) was superior to Manual-ResNet (AUC 0.91).CT image characteristics of lesions extracted by ResNet are more representative than wavelet, LBP, HOG, GLCM, Gabor, and AlexNet. Compared to the use of three classifiers alone and Majority Voting rule method, the use of the MMRF-ResNet model exhibits a better evaluation effect (AUC 0.96) for the classification of the pancreatic SCNs and MCNs. CONCLUSION The CT image classification model MMRF-ResNet is an effective method to distinguish between pancreatic SCNs and MCNs.
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Affiliation(s)
- Rong Yang
- Department of Radiology, The First Affiliated Hospital, Zhejiang University School of Medicine, #79 Qingchun Road, Hangzhou, 310003, Zhejiang Province, P.R. China
| | - Yizhou Chen
- College of Computer Science and Technology, Zhejiang University of Technology, #288 Liuhe Road, Hangzhou, 310023, Zhejiang Province, P.R. China
| | - Guo Sa
- Department of Radiology, The First Affiliated Hospital, Zhejiang University School of Medicine, #79 Qingchun Road, Hangzhou, 310003, Zhejiang Province, P.R. China
| | - Kangjie Li
- College of Computer Science and Technology, Zhejiang University of Technology, #288 Liuhe Road, Hangzhou, 310023, Zhejiang Province, P.R. China
| | - Haigen Hu
- College of Computer Science and Technology, Zhejiang University of Technology, #288 Liuhe Road, Hangzhou, 310023, Zhejiang Province, P.R. China
| | - Jie Zhou
- Department of Pathology, The First Affiliated Hospital, Zhejiang University School of Medicine, #79 Qingchun Road, Hangzhou, 310003, Zhejiang Province, P.R. China
| | - Qiu Guan
- College of Computer Science and Technology, Zhejiang University of Technology, #288 Liuhe Road, Hangzhou, 310023, Zhejiang Province, P.R. China.
| | - Feng Chen
- Department of Radiology, The First Affiliated Hospital, Zhejiang University School of Medicine, #79 Qingchun Road, Hangzhou, 310003, Zhejiang Province, P.R. China.
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Zhang X, Liu X, Zhang B, Dong J, Zhang B, Zhao S, Li S. Accurate segmentation for different types of lung nodules on CT images using improved U-Net convolutional network. Medicine (Baltimore) 2021; 100:e27491. [PMID: 34622882 PMCID: PMC8500581 DOI: 10.1097/md.0000000000027491] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Revised: 09/02/2021] [Accepted: 09/23/2021] [Indexed: 01/05/2023] Open
Abstract
ABSTRACT Since lung nodules on computed tomography images can have different shapes, contours, textures or locations and may be attached to neighboring blood vessels or pleural surfaces, accurate segmentation is still challenging. In this study, we propose an accurate segmentation method based on an improved U-Net convolutional network for different types of lung nodules on computed tomography images.The first phase is to segment lung parenchyma and correct the lung contour by applying α-hull algorithm. The second phase is to extract image pairs of patches containing lung nodules in the center and the corresponding ground truth and build an improved U-Net network with introduction of batch normalization.A large number of experiments manifest that segmentation performance of Dice loss has superior results than mean square error and Binary_crossentropy loss. The α-hull algorithm and batch normalization can improve the segmentation performance effectively. Our best result for Dice similar coefficient (0.8623) is also more competitive than other state-of-the-art segmentation algorithms.In order to segment different types of lung nodules accurately, we propose an improved U-Net network, which can improve the segmentation accuracy effectively. Moreover, this work also has practical value in helping radiologists segment lung nodules and diagnose lung cancer.
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Detection of Lung Nodules in Micro-CT Imaging Using Deep Learning. ACTA ACUST UNITED AC 2021; 7:358-372. [PMID: 34449750 PMCID: PMC8396172 DOI: 10.3390/tomography7030032] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Revised: 07/23/2021] [Accepted: 08/02/2021] [Indexed: 02/05/2023]
Abstract
We are developing imaging methods for a co-clinical trial investigating synergy between immunotherapy and radiotherapy. We perform longitudinal micro-computed tomography (micro-CT) of mice to detect lung metastasis after treatment. This work explores deep learning (DL) as a fast approach for automated lung nodule detection. We used data from control mice both with and without primary lung tumors. To augment the number of training sets, we have simulated data using real augmented tumors inserted into micro-CT scans. We employed a convolutional neural network (CNN), trained with four competing types of training data: (1) simulated only, (2) real only, (3) simulated and real, and (4) pretraining on simulated followed with real data. We evaluated our model performance using precision and recall curves, as well as receiver operating curves (ROC) and their area under the curve (AUC). The AUC appears to be almost identical (0.76-0.77) for all four cases. However, the combination of real and synthetic data was shown to improve precision by 8%. Smaller tumors have lower rates of detection than larger ones, with networks trained on real data showing better performance. Our work suggests that DL is a promising approach for fast and relatively accurate detection of lung tumors in mice.
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Automatic detect lung node with deep learning in segmentation and imbalance data labeling. Sci Rep 2021; 11:11174. [PMID: 34045563 PMCID: PMC8160011 DOI: 10.1038/s41598-021-90599-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2020] [Accepted: 05/07/2021] [Indexed: 11/18/2022] Open
Abstract
In this study, a novel method with the U-Net-based network architecture, 2D U-Net, is employed to segment the position of lung nodules, which are an early symptom of lung cancer and have a high probability of becoming a carcinoma, especially when a lung nodule is bigger than 15 \documentclass[12pt]{minimal}
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\begin{document}$$\mathrm{mm}^2$$\end{document}mm2. A serious problem of considering deep learning for all medical images is imbalanced labeling between foreground and background. The lung nodule is the foreground which accounts for a lower percentage in a whole image. The evaluation function adopted in this study is dice coefficient loss, which is usually used in image segmentation tasks. The proposed pre-processing method in this study is to use complementary labeling as the input in U-Net. With this method, the labeling is swapped. The no-nodule position is labeled. And the position of the nodule becomes non-labeled. The result shows that the proposal in this study is efficient in a small quantity of data. This method, complementary labeling could be used in a small data quantity scenario. With the use of ROI segmentation model in the data pre-processing, the results of lung nodule detection can be improved a lot as shown in the experiments.
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Ziyad SR, Radha V, Vayyapuri T. Overview of Computer Aided Detection and Computer Aided Diagnosis Systems for Lung Nodule Detection in Computed Tomography. Curr Med Imaging 2020; 16:16-26. [PMID: 31989890 DOI: 10.2174/1573405615666190206153321] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2018] [Revised: 01/02/2019] [Accepted: 01/10/2019] [Indexed: 11/22/2022]
Abstract
BACKGROUND Lung cancer has become a major cause of cancer-related deaths. Detection of potentially malignant lung nodules is essential for the early diagnosis and clinical management of lung cancer. In clinical practice, the interpretation of Computed Tomography (CT) images is challenging for radiologists due to a large number of cases. There is a high rate of false positives in the manual findings. Computer aided detection system (CAD) and computer aided diagnosis systems (CADx) enhance the radiologists in accurately delineating the lung nodules. OBJECTIVES The objective is to analyze CAD and CADx systems for lung nodule detection. It is necessary to review the various techniques followed in CAD and CADx systems proposed and implemented by various research persons. This study aims at analyzing the recent application of various concepts in computer science to each stage of CAD and CADx. METHODS This review paper is special in its own kind because it analyses the various techniques proposed by different eminent researchers in noise removal, contrast enhancement, thorax removal, lung segmentation, bone suppression, segmentation of trachea, classification of nodule and nonnodule and final classification of benign and malignant nodules. RESULTS A comparison of the performance of different techniques implemented by various researchers for the classification of nodule and non-nodule has been tabulated in the paper. CONCLUSION The findings of this review paper will definitely prove to be useful to the research community working on automation of lung nodule detection.
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Affiliation(s)
- Shabana Rasheed Ziyad
- Department of Computer Science, College of Computer Engineering and Sciences, Prince Sattam Bin AbdulAziz University, Al Kharj, Saudi Arabia
| | - Venkatachalam Radha
- Department of Computer Science, Avinashilingam Institute for Home Science and Higher Education for Women, Coimbatore, India
| | - Thavavel Vayyapuri
- Department of Computer Science, College of Computer Engineering and Sciences, Prince Sattam Bin AbdulAziz University, Al Kharj, Saudi Arabia
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The effect of pulmonary vessel suppression on computerized detection of nodules in chest CT scans. Med Phys 2020; 47:4917-4927. [DOI: 10.1002/mp.14401] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 06/28/2020] [Accepted: 07/09/2020] [Indexed: 12/19/2022] Open
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Meldo A, Utkin L, Kovalev M, Kasimov E. The natural language explanation algorithms for the lung cancer computer-aided diagnosis system. Artif Intell Med 2020; 108:101952. [PMID: 32972653 DOI: 10.1016/j.artmed.2020.101952] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Revised: 07/16/2020] [Accepted: 08/19/2020] [Indexed: 12/20/2022]
Abstract
Two algorithms for explaining decisions of a lung cancer computer-aided diagnosis system are proposed. Their main peculiarity is that they produce explanations of diseases in the form of special sentences via natural language. The algorithms consist of two parts. The first part is a standard local post-hoc explanation model, for example, the well-known LIME, which is used for selecting important features from a special feature representation of the segmented lung suspicious objects. This part is identical for both algorithms. The second part is a model which aims to connect selected important features and to transform them to explanation sentences in natural language. This part is implemented differently for both algorithms. The training phase of the first algorithm uses a special vocabulary of simple phrases which produce sentences and their embeddings. The second algorithm significantly simplifies some parts of the first algorithm and reduces the explanation problem to a set of simple classifiers. The basic idea behind the improvement is to represent every simple phrase from vocabulary as a class of the "sparse" histograms. An implementation of the second algorithm is shown in detail.
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Affiliation(s)
- Anna Meldo
- Peter the Great St. Petersburg Polytechnic University (SPbPU), Russia; Clinical Research Center of Specialized Types of Medical Care (Oncological), Russia
| | - Lev Utkin
- Peter the Great St. Petersburg Polytechnic University (SPbPU), Russia.
| | - Maxim Kovalev
- Peter the Great St. Petersburg Polytechnic University (SPbPU), Russia
| | - Ernest Kasimov
- Peter the Great St. Petersburg Polytechnic University (SPbPU), Russia
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Abstract
Lung nodule segmentation is an essential step in any CAD system for lung cancer detection and diagnosis. Traditional approaches for image segmentation are mainly morphology based or intensity based. Motion-based segmentation techniques tend to use the temporal information along with the morphology and intensity information to perform segmentation of regions of interest in videos. CT scans comprise of a sequence of dicom 2-D image slices similar to videos which also comprise of a sequence of image frames ordered on a timeline. In this work, Farneback, Horn-Schunck and Lucas-Kanade optical flow methods have been used for processing the dicom slices. The novelty of this work lies in the usage of optical flow methods, generally used in motion-based segmentation tasks, for the segmentation of nodules from CT images. Since thin-sliced CT scans are the imaging modality considered, they closely approximate the motion videos and are the primary motivation for using optical flow for lung nodule segmentation. This paper also provides a detailed comparative analysis and validates the effectiveness of using optical flow methods for segmentation. Finally, we propose methods to further improve the efficiency of segmentation using optical flow methods on CT scans.
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Duan S, Cao H, Liu H, Miao L, Wang J, Zhou X, Wang W, Hu P, Qu L, Wu Y. Development of a machine learning-based multimode diagnosis system for lung cancer. Aging (Albany NY) 2020; 12:9840-9854. [PMID: 32445550 PMCID: PMC7288961 DOI: 10.18632/aging.103249] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Accepted: 04/20/2020] [Indexed: 02/06/2023]
Abstract
As an emerging technology, artificial intelligence has been applied to identify various physical disorders. Here, we developed a three-layer diagnosis system for lung cancer, in which three machine learning approaches including decision tree C5.0, artificial neural network (ANN) and support vector machine (SVM) were involved. The area under the curve (AUC) was employed to evaluate their decision powers. In the first layer, the AUCs of C5.0, ANN and SVM were 0.676, 0.736 and 0.640, ANN was better than C5.0 and SVM. In the second layer, ANN was similar with SVM but superior to C5.0 supported by the AUCs of 0.804, 0.889 and 0.825. Much higher AUCs of 0.908, 0.910 and 0.849 were identified in the third layer, where the highest sensitivity of 94.12% was found in C5.0. These data proposed a three-layer diagnosis system for lung cancer: ANN was used as a broad-spectrum screening subsystem basing on 14 epidemiological data and clinical symptoms, which was firstly adopted to screen high-risk groups; then, combining with additional 5 tumor biomarkers, ANN was used as an auxiliary diagnosis subsystem to determine the suspected lung cancer patients; C5.0 was finally employed to confirm lung cancer patients basing on 22 CT nodule-based radiomic features.
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Affiliation(s)
- Shuyin Duan
- College of Public Health, Zhengzhou University, Zhengzhou 450001, China
| | - Huimin Cao
- College of Public Health, Zhengzhou University, Zhengzhou 450001, China
| | - Hong Liu
- The First Affiliated Hospital of Zhengzhou University, Zhengzhou 450001, China
| | - Lijun Miao
- The First Affiliated Hospital of Zhengzhou University, Zhengzhou 450001, China
| | - Jing Wang
- The First Affiliated Hospital of Zhengzhou University, Zhengzhou 450001, China
| | - Xiaolei Zhou
- Henan Provincial Chest Hospital, Zhengzhou 450001, China
| | - Wei Wang
- College of Public Health, Zhengzhou University, Zhengzhou 450001, China
| | - Pingzhao Hu
- Department of Biochemistry and Medical Genetics, University of Manitoba, Winnipeg, MB R3E 3N4, Canada
| | - Lingbo Qu
- College of Public Health, Zhengzhou University, Zhengzhou 450001, China.,Henan Joint International Research Laboratory of Green Construction of Functional Molecules and Their Bioanalytical Applications, Zhengzhou 450001, China
| | - Yongjun Wu
- College of Public Health, Zhengzhou University, Zhengzhou 450001, China.,The Key Laboratory of Nanomedicine and Health Inspection of Zhengzhou, Zhengzhou 450001, China
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17
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Lung nodules detection using semantic segmentation and classification with optimal features. Neural Comput Appl 2020. [DOI: 10.1007/s00521-020-04870-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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18
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Xu YM, Zhang T, Xu H, Qi L, Zhang W, Zhang YD, Gao DS, Yuan M, Yu TF. Deep Learning in CT Images: Automated Pulmonary Nodule Detection for Subsequent Management Using Convolutional Neural Network. Cancer Manag Res 2020; 12:2979-2992. [PMID: 32425607 PMCID: PMC7196793 DOI: 10.2147/cmar.s239927] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Accepted: 04/05/2020] [Indexed: 12/26/2022] Open
Abstract
PURPOSE The purpose of this study is to compare the detection performance of the 3-dimensional convolutional neural network (3D CNN)-based computer-aided detection (CAD) models with radiologists of different levels of experience in detecting pulmonary nodules on thin-section computed tomography (CT). PATIENTS AND METHODS We retrospectively reviewed 1109 consecutive patients who underwent follow-up thin-section CT at our institution. The 3D CNN model for nodule detection was re-trained and complemented by expert augmentation. The annotations of a consensus panel consisting of two expert radiologists determined the ground truth. The detection performance of the re-trained CAD model and three other radiologists at different levels of experience were tested using a free-response receiver operating characteristic (FROC) analysis in the test group. RESULTS The detection performance of the re-trained CAD model was significantly better than that of the pre-trained network (sensitivity: 93.09% vs 38.44%). The re-trained CAD model had a significantly better detection performance than radiologists (average sensitivity: 93.09% vs 50.22%), without significantly increasing the number of false positives per scan (1.64 vs 0.68). In the training set, 922 nodules less than 3 mm in size in 211 patients at high risk were recommended for follow-up CT according to the Fleischner Society Guidelines. Fifteen of 101 solid nodules were confirmed to be lung cancer. CONCLUSION The re-trained 3D CNN-based CAD model, complemented by expert augmentation, was an accurate and efficient tool in identifying incidental pulmonary nodules for subsequent management.
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Affiliation(s)
- Yi-Ming Xu
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
| | - Teng Zhang
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
| | - Hai Xu
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
| | - Liang Qi
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
| | - Wei Zhang
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
| | - Yu-Dong Zhang
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
| | - Da-Shan Gao
- 12sigma Technologies, San Diego, California, USA
| | - Mei Yuan
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
| | - Tong-Fu Yu
- Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People’s Republic of China
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Kuo CFJ, Huang CC, Siao JJ, Hsieh CW, Huy VQ, Ko KH, Hsu HH. Automatic lung nodule detection system using image processing techniques in computed tomography. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2019.101659] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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20
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Wang Y, Wu B, Zhang N, Liu J, Ren F, Zhao L. Research progress of computer aided diagnosis system for pulmonary nodules in CT images. JOURNAL OF X-RAY SCIENCE AND TECHNOLOGY 2020; 28:1-16. [PMID: 31815727 DOI: 10.3233/xst-190581] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND OBJECTIVE Since CAD (Computer Aided Diagnosis) system can make it easier and more efficient to interpret CT (Computer Tomography) images, it has gained much attention and developed rapidly in recent years. This article reviews recent CAD techniques for pulmonary nodule detection and diagnosis in CT Images. METHODS CAD systems can be classified into computer-aided detection (CADe) and computer-aided diagnosis (CADx) systems. This review reports recent researches of both systems, including the database, technique, innovation and experimental results of each work. Multi-task CAD systems, which can handle segmentation, false positive reduction, malignancy prediction and other tasks at the same time. The commercial CAD systems are also briefly introduced. RESULTS We have found that deep learning based CAD is the mainstream of current research. The reported sensitivity of deep learning based CADe systems ranged between 80.06% and 94.1% with an average 4.3 false-positive (FP) per scan when using LIDC-IDRI dataset, and between 94.4% and 97.9% with an average 4 FP/scan when using LUNA16 dataset, respectively. The overall accuracy of deep learning based CADx systems ranged between 86.84% and 92.3% with an average AUC of 0.956 reported when using LIDC-IDRI dataset. CONCLUSIONS We summarized the current tendency and limitations as well as future challenges in this field. The development of CAD needs to meet the rigid clinical requirements, such as high accuracy, strong robustness, high efficiency, fine-grained analysis and classification, and to provide practical clinical functions. This review provides helpful information for both engineering researchers and radiologists to learn the latest development of CAD systems.
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Affiliation(s)
- Yu Wang
- School of Biomedical Engineering, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, Beijing, China
| | - Bo Wu
- School of Biomedical Engineering, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, Beijing, China
| | - Nan Zhang
- School of Biomedical Engineering, Capital Medical University, Beijing, China
- Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, Beijing, China
| | - Jiabao Liu
- Department of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, China
| | - Fei Ren
- Institute of Computing Technology, Chinese Academy of Sciences, Beijing, China
| | - Liqin Zhao
- Department of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, China
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21
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Gruetzemacher R, Gupta A, Paradice D. 3D deep learning for detecting pulmonary nodules in CT scans. J Am Med Inform Assoc 2019; 25:1301-1310. [PMID: 30137371 DOI: 10.1093/jamia/ocy098] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Accepted: 07/03/2018] [Indexed: 01/09/2023] Open
Abstract
Objective To demonstrate and test the validity of a novel deep-learning-based system for the automated detection of pulmonary nodules. Materials and Methods The proposed system uses 2 3D deep learning models, 1 for each of the essential tasks of computer-aided nodule detection: candidate generation and false positive reduction. A total of 888 scans from the LIDC-IDRI dataset were used for training and evaluation. Results Results for candidate generation on the test data indicated a detection rate of 94.77% with 30.39 false positives per scan, while the test results for false positive reduction exhibited a sensitivity of 94.21% with 1.789 false positives per scan. The overall system detection rate on the test data was 89.29% with 1.789 false positives per scan. Discussion An extensive and rigorous validation was conducted to assess the performance of the proposed system. The system demonstrated a novel combination of 3D deep neural network architectures and demonstrates the use of deep learning for both candidate generation and false positive reduction to be evaluated with a substantial test dataset. The results strongly support the ability of deep learning pulmonary nodule detection systems to generalize to unseen data. The source code and trained model weights have been made available. Conclusion A novel deep-neural-network-based pulmonary nodule detection system is demonstrated and validated. The results provide comparison of the proposed deep-learning-based system over other similar systems based on performance.
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Affiliation(s)
- Ross Gruetzemacher
- Department of Systems & Technology, Raymond J. Harbert College of Business, Auburn University, Auburn, AL, USA 36849
| | - Ashish Gupta
- Department of Systems & Technology, Raymond J. Harbert College of Business, Auburn University, Auburn, AL, USA 36849
| | - David Paradice
- Department of Systems & Technology, Raymond J. Harbert College of Business, Auburn University, Auburn, AL, USA 36849
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Pehrson LM, Nielsen MB, Ammitzbøl Lauridsen C. Automatic Pulmonary Nodule Detection Applying Deep Learning or Machine Learning Algorithms to the LIDC-IDRI Database: A Systematic Review. Diagnostics (Basel) 2019; 9:E29. [PMID: 30866425 PMCID: PMC6468920 DOI: 10.3390/diagnostics9010029] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Revised: 01/29/2019] [Accepted: 02/19/2019] [Indexed: 12/27/2022] Open
Abstract
The aim of this study was to provide an overview of the literature available on machine learning (ML) algorithms applied to the Lung Image Database Consortium Image Collection (LIDC-IDRI) database as a tool for the optimization of detecting lung nodules in thoracic CT scans. This systematic review was compiled according to Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines. Only original research articles concerning algorithms applied to the LIDC-IDRI database were included. The initial search yielded 1972 publications after removing duplicates, and 41 of these articles were included in this study. The articles were divided into two subcategories describing their overall architecture. The majority of feature-based algorithms achieved an accuracy >90% compared to the deep learning (DL) algorithms that achieved an accuracy in the range of 82.2%⁻97.6%. In conclusion, ML and DL algorithms are able to detect lung nodules with a high level of accuracy, sensitivity, and specificity using ML, when applied to an annotated archive of CT scans of the lung. However, there is no consensus on the method applied to determine the efficiency of ML algorithms.
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Affiliation(s)
- Lea Marie Pehrson
- Department of Diagnostic Radiology, Copenhagen University Hospital, Rigshospitalet, 2100 Copenhagen, Denmark.
- Department of Technology, Faculty of Health and Technology, University College Copenhagen, 2200 Copenhagen, Denmark.
| | - Michael Bachmann Nielsen
- Department of Diagnostic Radiology, Copenhagen University Hospital, Rigshospitalet, 2100 Copenhagen, Denmark.
| | - Carsten Ammitzbøl Lauridsen
- Department of Diagnostic Radiology, Copenhagen University Hospital, Rigshospitalet, 2100 Copenhagen, Denmark.
- Department of Technology, Faculty of Health and Technology, University College Copenhagen, 2200 Copenhagen, Denmark.
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Automatic nodule detection for lung cancer in CT images: A review. Comput Biol Med 2018; 103:287-300. [PMID: 30415174 DOI: 10.1016/j.compbiomed.2018.10.033] [Citation(s) in RCA: 57] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2018] [Revised: 10/29/2018] [Accepted: 10/29/2018] [Indexed: 12/18/2022]
Abstract
Automatic lung nodule detection has great significance for treating lung cancer and increasing patient survival. This work summarizes a critical review of recent techniques for automatic lung nodule detection in computed tomography images. This review indicates the current tendency and obtained progress as well as future challenges in this field. This research covered the databases including Web of Science, PubMed, and the Press, including IEEE Xplore and Science Direct, up to May 2018. Each part of the paper is summarized carefully in terms of the method and validation results for better comparison. Based on the results, some techniques show better performance for lung nodule detection. However, researchers should pay attention to the existing challenges, such as high sensitivity with a low false positive rate, large and different patient databases, developing or optimizing the detection technique of various types of lung nodules with different sizes, shapes, textures and locations, combining electronic medical records and picture archiving and communication systems, building efficient feature sets for better classification and promoting the cooperation and communication between academic institutions and medical organizations. We believe that automatic computer-aided detection systems will be developed with strong robustness, high efficiency and security assurance. This review will be helpful for professional researchers and radiologists to further learn about the latest techniques in computer-aided detection systems.
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Peng T, Wang Y, Xu TC, Shi L, Jiang J, Zhu S. Detection of Lung Contour with Closed Principal Curve and Machine Learning. J Digit Imaging 2018; 31:520-533. [PMID: 29450843 DOI: 10.1007/s10278-018-0058-y] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Abstract
Radiation therapy plays an essential role in the treatment of cancer. In radiation therapy, the ideal radiation doses are delivered to the observed tumor while not affecting neighboring normal tissues. In three-dimensional computed tomography (3D-CT) scans, the contours of tumors and organs-at-risk (OARs) are often manually delineated by radiologists. The task is complicated and time-consuming, and the manually delineated results will be variable from different radiologists. We propose a semi-supervised contour detection algorithm, which firstly uses a few points of region of interest (ROI) as an approximate initialization. Then the data sequences are achieved by the closed polygonal line (CPL) algorithm, where the data sequences consist of the ordered projection indexes and the corresponding initial points. Finally, the smooth lung contour can be obtained, when the data sequences are trained by the backpropagation neural network model (BNNM). We use the private clinical dataset and the public Lung Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI) dataset to measure the accuracy of the presented method, respectively. To the private dataset, experimental results on the initial points which are as low as 15% of the manually delineated points show that the Dice coefficient reaches up to 0.95 and the global error is as low as 1.47 × 10-2. The performance of the proposed algorithm is also better than the cubic spline interpolation (CSI) algorithm. While on the public LIDC-IDRI dataset, our method achieves superior segmentation performance with average Dice of 0.83.
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Affiliation(s)
- Tao Peng
- School of Computer Science & Technology, Soochow University, No.1 Shizi Road, Suzhou, Jiangsu, 215006, China.
| | - Yihuai Wang
- School of Computer Science & Technology, Soochow University, No.1 Shizi Road, Suzhou, Jiangsu, 215006, China.
| | - Thomas Canhao Xu
- School of Computer Science & Technology, Soochow University, No.1 Shizi Road, Suzhou, Jiangsu, 215006, China
| | - Lianmin Shi
- School of Computer Science & Technology, Soochow University, No.1 Shizi Road, Suzhou, Jiangsu, 215006, China
| | - Jianwu Jiang
- School of Computer Science & Technology, Soochow University, No.1 Shizi Road, Suzhou, Jiangsu, 215006, China
| | - Shilang Zhu
- School of Computer Science & Technology, Soochow University, No.1 Shizi Road, Suzhou, Jiangsu, 215006, China
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Narayanan BN, Hardie RC, Kebede TM. Performance analysis of a computer-aided detection system for lung nodules in CT at different slice thicknesses. J Med Imaging (Bellingham) 2018; 5:014504. [PMID: 29487880 PMCID: PMC5818068 DOI: 10.1117/1.jmi.5.1.014504] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2017] [Accepted: 01/25/2018] [Indexed: 11/14/2022] Open
Abstract
We study the performance of a computer-aided detection (CAD) system for lung nodules in computed tomography (CT) as a function of slice thickness. In addition, we propose and compare three different training methodologies for utilizing nonhomogeneous thickness training data (i.e., composed of cases with different slice thicknesses). These methods are (1) aggregate training using the entire suite of data at their native thickness, (2) homogeneous subset training that uses only the subset of training data that matches each testing case, and (3) resampling all training and testing cases to a common thickness. We believe this study has important implications for how CT is acquired, processed, and stored. We make use of 192 CT cases acquired at a thickness of 1.25 mm and 283 cases at 2.5 mm. These data are from the publicly available Lung Nodule Analysis 2016 dataset. In our study, CAD performance at 2.5 mm is comparable with that at 1.25 mm and is much better than at higher thicknesses. Also, resampling all training and testing cases to 2.5 mm provides the best performance among the three training methods compared in terms of accuracy, memory consumption, and computational time.
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Affiliation(s)
| | - Russell Craig Hardie
- University of Dayton, Department of Electrical and Computer Engineering, Dayton, Ohio, United States
| | - Temesguen Messay Kebede
- University of Dayton, Department of Electrical and Computer Engineering, Dayton, Ohio, United States
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Optimized feature selection-based clustering approach for computer-aided detection of lung nodules in different modalities. Pattern Anal Appl 2017. [DOI: 10.1007/s10044-017-0653-4] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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