Effect of the sampling rate on magnetic resonance imaging

SNR and total acquisition time analysis of multi-echo FLASH pulse sequence for current density imaging

Magnetic Resonance Current Density Imaging (MRCDI) is an imaging modality providing cross-sectional current density (J¯) information inside the body. The clinical applicability of MRCDI is highly dependent on the sensitivity of the acquired noisy current-induced magnetic flux density (B∼_z) distributions. Here, a novel analysis is developed to investigate the combined effect of relevant parameters of the RF spoiled gradient echo (FLASH) pulse sequence on the SNR level and the total acquisition time (TAT) of the acquired B∼_z images. The proposed analysis then is expanded for a multi-echo FLASH (ME-FLASH) pulse sequence to take advantage of combining the multiple echoes to achieve B∼_z^comb distribution with a higher SNR than the one achievable with a single echo acquisition. The optimized sequence parameters to acquire a B∼_z distribution with the highest possible SNR for a given acquisition time or the desired SNR in the shortest scan time are estimated using the proposed analysis. The analysis also provides different sets of sequence parameters to acquire B∼_z distributions with the same SNR at almost the same TAT. Furthermore, the effects of intensive utilization of the gradients and the magnetohydrodynamic (MHD) flow velocity on the acquired B∼_z distribution in MRCDI experiments is investigated. The analytical results of the proposed analysis are validated experimentally using an imaging phantom having the conductivity and the relaxation parameters of the brain white matter tissue.

Controlling T2 blurring in 3D RARE arterial spin labeling acquisition through optimal combination of variable flip angles and k-space filtering

PURPOSE

To improve the SNR efficiency and reduce the T₂ blurring of 3D rapid acquisition with relaxation enhancement stack-of-spiral arterial spin labeling imaging by using variable refocusing flip angles and k-space filtering.

METHODS

An algorithm for determining the optimal combination of variable flip angles and filtering correction is proposed. The flip angles are designed using extended phase graph physical simulations in an analytical and global optimization framework, with an optional constraint on deposited power. Optimal designs for correcting to Hann and Fermi window functions were compared with conventional constant amplitude or variable flip angle only designs on 6 volunteers.

RESULTS

With the Fermi window correction, the proposed optimal designs provided 39.8 and 27.3% higher SNR (P < .05) than conventional constant amplitude and variable flip angle designs. Even when power deposition was limited to 50% of the constant amplitude design, the proposed method outperformed the SNR (P < .05) of these 2 conventional approaches by 32.5 and 20.7%. The sharpness and the contrast between gray and white matter were improved with the k-space filtering correction for all of the flip angle designs. The improvements were moderate for the Hann window correction.

CONCLUSION

This work demonstrates that variable flip angles can be derived as the output of an optimization problem. The combined design of variable flip angle and k-space filtering provided superior SNR to designs primarily emphasizing either approach singly.

Monitoring chemotherapeutic response in RIF-1 tumors by single-quantum and triple-quantum-filtered (23)Na MRI, (1)H diffusion-weighted MRI and PET imaging

The effects of 5-fluorouracil (5FU, 150 mg/kg, ip) on subcutaneously implanted radiation-induced fibrosarcoma (RIF-1) tumors were monitored by in vivo (1)H MRI to evaluate the water apparent diffusion coefficient (ADC), by single-quantum (SQ) and triple-quantum-filtered (TQF) (23)Na MRI to evaluate compartmental Na(+) content and by positron emission tomography (PET) to evaluate 2-[(18)F]fluoro-2-deoxy-d-glucose (FDG) uptake in the tumor. The MRI experiments were performed on untreated control and treated mice once before and then daily for 3 days after treatment. The PET experiments were performed on separate groups of age- and tumor-volume-matched animals once before and then 3 days after treatment. Tumor volumes significantly decreased in treated animals 2 and 3 days posttreatment. At the same time points, in vivo MRI measurements showed an increase in both total tissue SQ (23)Na signal intensity (SI) and water ADC in treated tumors while control tumors showed no change in these parameters. TQF (23)Na SI and FDG uptake were significantly lower in treated tumors compared with control tumors 3 days after 5FU treatment. The correlated increases in total tissue (23)Na SI and water ADC following chemotherapy reflect an increase in extracellular space, while the lower TQF (23)Na SI and FDG uptake in treated tumors compared with control tumors suggest a shift in tumor metabolism from glycolysis to oxidation and/or a decrease in cell density.

Predicting and monitoring response to chemotherapy by 1,3-bis(2-chloroethyl)-1-nitrosourea in subcutaneously implanted 9L glioma using the apparent diffusion coefficient of water and23Na MRI

PURPOSE

To examine the effects of the alkylating anticancer drug 1,3-bis(2-chloroethyl)-1-nitrosourea (BCNU) on (23)Na MRI and the water apparent diffusion coefficient (ADC) in subcutaneously- (sc-) implanted 9L glioma in rats.

MATERIALS AND METHODS

(23)Na MRI and (1)H water ADC measurements were performed on sham-treated control (N = 6) and BCNU-treated (N = 15) Fisher rats one day before BCNU injection and then one, three, and five days after BCNU injection.

RESULTS

The BCNU-treated tumors were divided into BCNU-responsive (R(BCNU)) and BCNU-nonresponsive (NR(BCNU)) groups depending on the tumor volume changes that occurred after therapy. The pretreatment (23)Na MRI signal intensity (SI) and water ADC values were higher in R(BCNU) tumors compared to NR(BCNU) tumors. (23)Na MRI SI and water ADC increased with tumor growth in control and NR(BCNU) groups, but these changes were interrupted by BCNU therapy in R(BCNU) group.

CONCLUSION

(23)Na MRI and water ADC measurements may be useful for predicting and monitoring response to chemotherapy in some tumors. However, the changes that occurred in (23)Na MRI SI and water ADC in sc-implanted 9L tumors are in contrast to previously published results for BCNU therapy of orthotopic 9L tumors. This may have important implications for monitoring therapy response in tumors.

Application of 23Na MRI to monitor chemotherapeutic response in RIF-1 tumors

Effects of an alkylating anticancer drug, cyclophosphamide (Cp), on 23Na signal intensity (23Na SI) and water apparent diffusion coefficient (ADC) were examined in subcutaneously-implanted radiation-induced fibrosarcoma (RIF-1) tumors by 23Na and 1H magnetic resonance imaging (MRI). MRI experiments were performed on untreated control (n = 5) and Cp-treated (n = 6) C3H mice, once before Cp injection (300 mg/kg) then daily for 3 days after treatment. Tumor volumes were significantly lower in treated animals 2 and 3 days posttreatment. At the same time points, in vivo MRI experiments showed an increase in both 23Na SI and water ADC in treated tumors, whereas control tumors did not show any significant changes. The correlation between 23Na SI and water ADC changes was dramatically increased in the Cp-treated group, suggesting that the observed increases in 23Na SI and water ADC were caused by the same mechanism. Histologic sections showed decreased cell density in the regions of increased 23Na and water ADC SI. Destructive chemical analysis showed that Cp treatment increased the relative extracellular space and tumor [Na+]. We conclude that the changes in water ADC and 23Na SI were largely due to an increase in extracellular space. 23Na MRI and 1H water ADC measurements may provide valuable noninvasive techniques for monitoring chemotherapeutic responses.

Parsing local signal evolution directly from a single-shot MRI signal: a new approach for fMRI

In this work a new single-shot MRI method, single-shot parameter assessment by retrieval from signal encoding (SS-PARSE), is introduced. This method abandons a fundamental simplifying assumption that is used in conventional MRI methods. Established MRI methods implicitly assume that the local intrinsic signal does not change its amplitude or phase during signal acquisition, even though these changes may be substantial, especially during the relatively long signals used in single-shot image acquisitions. SS-PARSE, on the other hand, acknowledges local decay and phase evolution, and models each signal datum as a sample from (k,t)-space rather than k-space. Because of this more accurate signal model, SS-PARSE promises improved performance in terms of accuracy and robustness, but requires more intensive reconstruction computations. The theoretical properties of the method are discussed, and simulation results are presented that demonstrate more robust and accurate measurements of relaxation rate changes associated with brain activation in functional MRI (fMRI), freedom from geometric errors due to off-resonance frequencies, and better tolerance of the large susceptibility gradients that occur naturally in parts of the brain. In addition, this technique has the potential to assess nonexponential relaxation behavior during a single-shot signal.

Fast T2-weighted MR imaging: impact of variation in pulse sequence parameters on image quality and artifacts

The purpose of this study was to quantitatively evaluate in a phantom model the practical impact of alteration of key imaging parameters on image quality and artifacts for the most commonly used fast T(2)-weighted MR sequences. These include fast spin-echo (FSE), single shot fast spin-echo (SSFSE), and spin-echo echo-planar imaging (EPI) pulse sequences. We developed a composite phantom with different T1 and T2 values, which was evaluated while stationary as well as during periodic motion. Experiments involved controlled variations in key parameters including effective TE, TR, echo spacing (ESP), receive bandwidth (BW), echo train length (ETL), and shot number (SN). Quantitative analysis consisted of signal-to-noise ratio (SNR), image nonuniformity, full-width-at-half-maximum (i.e., blurring or geometric distortion) and ghosting ratio. Among the fast T(2)-weighted sequences, EPI was most sensitive to alterations in imaging parameters. Among imaging parameters that we tested, effective TE, ETL, and shot number most prominently affected image quality and artifacts. Short T(2) objects were more sensitive to alterations in imaging parameters in terms of image quality and artifacts. Optimal clinical application of these fast T(2)-weighted imaging pulse sequences requires careful attention to selection of imaging parameters.

Imaging orthopedic hardware with an emphasis on hip prostheses

This article reviews contemporary evaluation of hip prostheses, emphasizing both the accepted use of conventional radiographs, arthrograms, and scintigraphy, as well as the evolving use of CT and MR imaging in evaluating suspected complications. Developments in CT postprocessing and MR pulse sequence design now allow successful imaging of soft tissues adjacent to hardware components.

Adaptive filtering for high resolution magnetic resonance images

We present a study of least mean square (LMS) based adaptive filters for high resolution magnetic resonance (MR) images to improve signal-to-noise ratio (SNR) while maintaining sharp edges. Five variations of a new technique that senses the type of noise or the presence of an edge in the filtering window, called adaptive filtering with noise estimation (AFEN) are presented and compared with the basic two-dimensional LMS (TDLMS) algorithm, adaptive filtering with a mean estimator (AFLME), a two-dimensional averaged LMS (TDALMS) algorithm, and a two-dimensional median weighted LMS (TDMLMS) algorithm. Although TDLMS, TDALMS, and TDMLMS filters give better SNR improvement when applied uniformly to an image, they significantly blur edges. The AFLME and AFEN filters both show approximately a factor of 2 SNR improvement with much better retention of edges, with AFEN showing slightly better performance for both SNR and edge sharpness in phantom and in vivo inner ear images.

In vivo fluorine-19 MR imaging: relaxation enhancement with Gd-DTPA

The lack of a naturally occurring background signal from fluorine in magnetic resonance (MR) imaging makes fluorinated compounds potentially attractive candidates for tissue-specific MR contrast agents. Problems associated with the in vivo use of fluorinated compounds are toxicity, which limits the amount of agent that can be used; multiple resonance lines; and an excessively long T1, which leads to long sequence TRs and consequently long imaging times. Many fluorinated agents also possess complex MR spectra that result in chemical shift artifacts if not corrected. The authors demonstrate the use of an extracellular fluorinated agent with a single MR peak for selective imaging of a brain abscess in an animal model and show that the image signal per unit of acquisition time can be enhanced through the use of a T1 relaxation agent, gadolinium diethylenetriamine-pentaacetic acid (DTPA). Trifluoromethylsulfonate was administered at a fluorine-19 dose of 4 mmol/kg, and fluorine images of the induced abscess were acquired before and after the injection of a standard dose of Gd-DTPA (0.1 mmol/kg); non-section-selected projection images were used. Typical imaging times were less than 5 minutes. The signal enhancement factor achieved was approximately four (4.0 +/- 0.8) with use of a 500/12 (TR msec/TE msec) spin-echo sequence.

Hybrid RARE: implementations for abdominal MR imaging

Hybrid RARE (rapid acquisition with relaxation enhancement) is a family of magnetic resonance (MR) imaging techniques whereby a set of images is phase encoded with more than one spin echo per excitation pulse. This increases the efficiency of obtaining T2-weighted images, allowing greater flexibility regarding acquisition time, resolution, signal-to-noise ratio, and tissue contrast. Hybrid RARE techniques involve several important new user-selectable parameters such as effective TE, echo train length, and echo spacing. Choices of other parameters, such as TR, sampling bandwidth, and acquisition matrix, may be different from those of comparable conventional T2-weighted spin-echo images. Different hybrid RARE implementations can be used for abdominal screening, with T2-weighted or T2-weighted and inversion-recovery contrast, or for characterizing liver lesions or imaging the biliary system with an extremely long TE. High-resolution images may be obtained by averaging multiple signals during quiet breathing, or images may be acquired more rapidly during suspended respiration. In this review, the authors discuss the basic principles of hybrid RARE techniques and how various imaging parameters can be manipulated to increase the quality and flexibility of abdominal T2-weighted MR imaging.

Conventional and fast spin-echo MR imaging: minimizing echo time

Magnetic resonance imaging is frequently complicated by the presence of motion and susceptibility gradients. Also, some biologic tissues have short T2s. These problems are particularly troublesome in fast spin-echo (FSE) imaging, in which T2 decay and motion between echoes result in image blurring and ghost artifacts. The authors reduced TE in conventional spin-echo (SE) imaging to 5 msec and echo spacing (E-space) in FSE imaging to 6 msec. All magnetic gradients (except readout) were kept at a maximum, with data sampling as fast as 125 kHz and only ramp waveforms used. Truncated sinc radio-frequency pulses and asymmetric echo sampling were also used in SE imaging. Short TE (5.8 msec) SE images of the upper abdomen were compared with conventional SE images (TE = 11 msec). Also, FSE images with short E-space were compared with conventional FSE images in multiple body sites. Short TE significantly improved the liver-spleen contrast-to-total noise ratio (C/N) (7.9 vs 4.1, n = 9, P < .01) on T1-weighted SE images, reduced the intensity of ghost artifacts (by 34%, P < .02), and increased the number of available imaging planes by 30%. It also improved delineation of cranial nerves and reduced susceptibility artifacts. On short E-space FSE images, spine, lung, upper abdomen, and musculoskeletal tissues appeared crisper and measured spleen-liver C/N increased significantly (6.9 vs 4.0, n = 12, P < .01). The delineation of tissues with short T2 (eg, cartilage) and motion artifact suppression were also improved. Short TE methods can improve image quality in both SE and FSE imaging and merit further clinical evaluation.

High resolution spin-echo imaging of the temporomandibular joint

High resolution thin section (1.5 mm thick) spin echo images (HRSE) with narrow bandwidth of TMJ were compared to the conventional (3 mm thick) spin echo images (CSE) in 20 symptomatic patients. Our results revealed that the disk delineation was superior with HRSE and the degree of confidence in making the diagnosis was significantly higher with HRSE than with CSE. Narrow bandwidth, high resolution spin echo technique offers better anatomic detail in the TMJ, resulting in improved degree of confidence, without penalty in additional imaging time.

Reduced-bandwidth method for F-19 imaging of perflubron

A reduced-bandwidth imaging method has been developed to eliminate the chemical shift artifacts in magnetic resonance (MR) imaging of the blood substitute perflubron (PFB) and simultaneously enhance the signal-to-noise ratio (SNR). The two strongest spectral peaks, which have relatively long T2 values (247 and 471 msec), were used. When the receiver bandwidth is reduced substantially by increasing the data acquisition time Ts, the bandwidth across the object becomes less than the chemical shift frequency. The reduced bandwidth eliminates misregistration by displaying the images corresponding to multiple spectral peaks on the same image plane simultaneously. An additional gain due to the reduced bandwidth is the reduced thermal Gaussian noise. Unfortunately, the increased Ts results in an increased TE, which causes the signal to be attenuated by T2 relaxation. The optimum measured Ts (and TE) values for successful image separation and maximum SNR were 120 and 144 msec for the two spectral peaks, respectively. The long TE also suppresses the rest of the downfield spectral peak cluster of PFB. The degree of magnetic field inhomogeneity and tissue susceptibility across the object may cause some limitations in the application of this technique; however, a composite radio-frequency pulse that will allow use of additional spectral lines and/or localized volume imaging techniques may be incorporated to overcome these limitations.

Analysis of T2 limitations and off-resonance effects on spatial resolution and artifacts in echo-planar imaging

Several aspects of blipped echo-planar imaging (EPI) are treated mathematically. An expression relating the necessary readout gradient strength and sampling time to the spatial resolution and readout duration is derived. It is shown how the net spatial resolution may be limited by the object's T2 characteristics and B0 field homogeneity, irrespective of the number of sampled points. Additionally, off-resonance effects result in a loss of spatial resolution and image distortion to a considerably greater degree than in conventional two-dimensional Fourier transform imaging. The extent of these effects is directly related to the time required to acquire the data matrix, and is therefore amplified when EPI is implemented on a standard commercial whole-body system which because of limited gradient performance uses necessarily longer sampling durations. Specific hardware modifications to a standard commercial imager are considered to allow successful EPI implementation. EPI image characteristics are compared quantitatively with those of conventional methods.

Bone marrow findings on magnetic resonance images of the knee: accentuation by fat suppression

Long TR/double spin-echo magnetic resonance images of the knee were obtained with and without the use of fat suppression techniques in seven patients with high signal intramedullary lesions. Comparison between images was performed qualitatively and quantitatively. Contrast-to-noise ratios between focal defects and surrounding fatty marrow were higher with fat suppression in all cases. The mean contrast-to-noise ratio for images obtained with fat suppression was 53.6, while for images obtained without fat suppression the mean contrast-to-noise ratio was 17.3 (p less than 0.01).

Pulse sequence optimization for T2-weighted MR imaging of the brain

The authors implemented bipolar velocity compensated pulse techniques for T2-weighted MR imaging of the brain. Signal-to-noise (S/N) and image quality was compared for pulse sequences with standard and optimized RF pulses, low and regular bandwidth versions and cardiac triggering. Images from bipolar velocity compensated sequences allowed better visualization of vessels and basilar cisterns and improved image quality relative to standard sequences without velocity compensation. The implementation of optimized RF pulses with bipolar sequences resulted in further improvement in image quality. Single echo sequences consistently had improved image quality and signal-to-noise relative to the second echo of a double echo sequence. Low bandwidth bipolar sequences with extended sampling period had 30% higher S/N, but at the cost of slight loss in edge definition. The highest image quality was obtained with the bipolar, optimized RF, single echo sequence. Using this technique contiguous high quality image slices could be obtained with velocity compensation. The addition of cardiac triggering to bipolar sequences resulted in slight improvement in image quality, but this difference was marginal and probably rarely necessary for MR imaging of the brain.