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Marhabaie S, Bodenhausen G, Pelupessy P. Advances in single-scan time-encoding magnetic resonance imaging. Sci Rep 2018; 8:10891. [PMID: 30022090 PMCID: PMC6052028 DOI: 10.1038/s41598-018-28460-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Accepted: 06/12/2018] [Indexed: 11/09/2022] Open
Abstract
Time-encoding MRI is a single-scan method that uses traditional k-encoding only in one direction. In the orthogonal “time-encoding” direction, a string of echoes appears in an order that depends on the position of the corresponding spin packets. In one variant of time-encoding, this is achieved by using a series of selective pulses and appropriate gradients in both k-encoding and time-encoding directions. Although time-encoding offers some advantages over traditional single-scan Fourier methods such as echo planar imaging (EPI), the original time-encoding sequence also has some drawbacks that limit its applications. In this work, we show how one can improve several aspects of the original time-encoding sequence. By using an additional gradient pulse one can change the order in which the echoes appear, leading to identical echo times for all echoes, and hence to a uniform signal attenuation due to transverse relaxation and a reduction in average signal attenuation due to diffusion. By rearranging positive and negative gradients one can reduce the switching rate of the gradients. Furthermore, we show how one can implement time-encoding sequences in an interleaved fashion in order to reduce signal attenuation due to transverse relaxation and diffusion, while increasing the spatial resolution.
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Affiliation(s)
- Sina Marhabaie
- Laboratoire des biomolécules, LBM, Département de chimie, École normale supérieure, PSL University, Sorbonne Université, CNRS, 75005, Paris, France.
| | - Geoffrey Bodenhausen
- Laboratoire des biomolécules, LBM, Département de chimie, École normale supérieure, PSL University, Sorbonne Université, CNRS, 75005, Paris, France
| | - Philippe Pelupessy
- Laboratoire des biomolécules, LBM, Département de chimie, École normale supérieure, PSL University, Sorbonne Université, CNRS, 75005, Paris, France
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Marhabaie S, Bodenhausen G, Pelupessy P. Susceptibility contrast by echo shifting in spatially encoded single-scan MRI. Phys Chem Chem Phys 2017; 19:14210-14213. [PMID: 28537619 DOI: 10.1039/c7cp01898c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
To overcome the effects of static field inhomogeneities, single-scan hybrid imaging techniques that use k-space encoding in one direction and spatial encoding in the other have been shown to be superior to traditional imaging techniques based on full k-space encoding. Like traditional imaging methods, hybrid methods can be implemented in different ways that favor different sources of contrast. So far, little attention appears to have been paid to these aspects. By modifying an established hybrid imaging sequence called Rapid Acquisition by Sequential Excitation and Refocusing (RASER) so as to obtain Echo-Shifted RASER sequences, we show that by shifting spin echoes one can tune the contrast due to inhomogeneous T decay.
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Affiliation(s)
- Sina Marhabaie
- Département de Chimie, École Normale Supérieure, PSL Research University, UPMC Univ Paris 06, CNRS, Laboratoire des Biomolecules (LBM), 24 rue Lhomond, 75005 Paris, France.
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Marhabaie S, Bodenhausen G, Pelupessy P. The effects of molecular diffusion in spatially encoded magnetic resonance imaging. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2016; 273:98-104. [PMID: 27821292 DOI: 10.1016/j.jmr.2016.10.010] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2016] [Revised: 10/10/2016] [Accepted: 10/14/2016] [Indexed: 06/06/2023]
Abstract
In spatially encoded MRI, the signal is acquired sequentially for different coordinates. In particular for single-scan acquisitions in inhomogeneous fields, spatially encoded methods improve the image quality compared to traditional k-space encoding. Previously, much attention has been paid in order to homogenize T2 losses across the sample. In this work, we investigate the effects of diffusion on the image quality in spatially encoded MRI. We show that losses due to diffusion are often not uniform along the spatially encoded dimension, and how to adapt spatially encoded sequences in order to obtain uniformly diffusion-weighted images.
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Affiliation(s)
- Sina Marhabaie
- Département de Chimie, École Normale Supérieure, PSL Research University, UPMC Univ Paris 06, CNRS, Laboratoire des Biomolecules (LBM), 24 rue Lhomond, 75005 Paris, France; Sorbonne Universités, UPMC Univ. Paris 06, École Normale Supérieure, CNRS, Laboratoire des Biomolecules (LBM), Paris, France
| | - Geoffrey Bodenhausen
- Département de Chimie, École Normale Supérieure, PSL Research University, UPMC Univ Paris 06, CNRS, Laboratoire des Biomolecules (LBM), 24 rue Lhomond, 75005 Paris, France; Sorbonne Universités, UPMC Univ. Paris 06, École Normale Supérieure, CNRS, Laboratoire des Biomolecules (LBM), Paris, France; Institut des Sciences et Ingéniérie Chimiques, Ecole Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland
| | - Philippe Pelupessy
- Département de Chimie, École Normale Supérieure, PSL Research University, UPMC Univ Paris 06, CNRS, Laboratoire des Biomolecules (LBM), 24 rue Lhomond, 75005 Paris, France; Sorbonne Universités, UPMC Univ. Paris 06, École Normale Supérieure, CNRS, Laboratoire des Biomolecules (LBM), Paris, France.
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Powell NJ, Jang A, Park JY, Valette J, Garwood M, Marjańska M. Gradient rotating outer volume excitation (GROOVE): A novel method for single-shot two-dimensional outer volume suppression. Magn Reson Med 2015; 73:139-49. [PMID: 24478130 PMCID: PMC4115059 DOI: 10.1002/mrm.25101] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2013] [Revised: 12/05/2013] [Accepted: 12/06/2013] [Indexed: 11/06/2022]
Abstract
PURPOSE To introduce a new outer volume suppression (OVS) technique that uses a single pulse and rotating gradients to accomplish frequency-swept excitation. This new technique, which is called gradient rotating outer volume excitation (GROOVE), produces a circular or elliptical suppression band rather than suppressing the entire outer volume. METHODS Theoretical and k-space descriptions of GROOVE are provided. The properties of GROOVE were investigated with simulations, phantom, and human experiments performed using a 4T horizontal bore magnet equipped with a TEM coil. RESULTS Similar suppression performance was obtained in phantom and human brain using GROOVE with circular and elliptical shapes. Simulations indicate that GROOVE requires less SAR and time than traditional OVS schemes, but traditional schemes provide a sharper transition zone and less residual signal. CONCLUSION GROOVE represents a new way of performing OVS in which spins are excited temporally in space on a trajectory that can be tailored to fit the shape of the suppression region. In addition, GROOVE is capable of suppressing tailored regions of space with more flexibility and in a shorter period of time than conventional methods. GROOVE provides a fast, low SAR alternative to conventional OVS methods in some applications (e.g., scalp suppression).
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Affiliation(s)
- Nathaniel J. Powell
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, 2021 6 ST SE, Minneapolis, Minnesota 55455, United States
- Graduate Program in Neuroscience, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Albert Jang
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, 2021 6 ST SE, Minneapolis, Minnesota 55455, United States
- Department of Electrical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Jang-Yeon Park
- Department of Biomedical Engineering, Research Institute of Biomedical Engineering, College of Biomedical and Health Science, Konkuk University, Chungju, South Korea
| | - Julien Valette
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, 2021 6 ST SE, Minneapolis, Minnesota 55455, United States
- Commissariat à l'Energie Atomique (CEA), Molecular Imaging Research Center (MIRCen), 18 route du panorama, BP n°6, F-92265, Fontenay-aux-Roses, France
| | - Michael Garwood
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, 2021 6 ST SE, Minneapolis, Minnesota 55455, United States
| | - Małgorzata Marjańska
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, 2021 6 ST SE, Minneapolis, Minnesota 55455, United States
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Ben-Eliezer N, Shrot Y, Frydman L, Sodickson DK. Parametric analysis of the spatial resolution and signal-to-noise ratio in super-resolved spatiotemporally encoded (SPEN) MRI. Magn Reson Med 2013; 72:418-29. [DOI: 10.1002/mrm.24954] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2013] [Revised: 08/18/2013] [Accepted: 08/21/2013] [Indexed: 12/29/2022]
Affiliation(s)
- Noam Ben-Eliezer
- The Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York; University School of Medicine; New York New York USA
| | - Yoav Shrot
- Department of Chemical Physics; Weizmann Institute of Science; Rehovot Israel
| | - Lucio Frydman
- Department of Chemical Physics; Weizmann Institute of Science; Rehovot Israel
| | - Daniel K. Sodickson
- The Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York; University School of Medicine; New York New York USA
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Application of basic physics principles to clinical neuroradiology: differentiating artifacts from true pathology on MRI. AJR Am J Roentgenol 2013; 201:369-77. [PMID: 23883218 DOI: 10.2214/ajr.12.10394] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
OBJECTIVE This article outlines artifactual findings commonly encountered in neuroradiologic MRI studies and offers clues to differentiate them from true pathology on the basis of their physical properties. Basic MR physics concepts are used to shed light on the causes of these artifacts. CONCLUSION MRI is one of the most commonly used techniques in neuroradiology. Unfortunately, MRI is prone to image distortion and artifacts that can be difficult to identify. Using the provided case illustrations, practical clues, and relevant physical applications, radiologists may devise algorithms to troubleshoot these artifacts.
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Snyder ALS, Corum CA, Moeller S, Powell NJ, Garwood M. MRI by steering resonance through space. Magn Reson Med 2013; 72:49-58. [PMID: 23913527 DOI: 10.1002/mrm.24888] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2013] [Revised: 06/07/2013] [Accepted: 06/24/2013] [Indexed: 11/07/2022]
Abstract
PURPOSE This work introduces a technique to excite MR signals locally and to steer this localized region over the object in a spatiotemporal manner. The purpose is to demonstrate the feasibility of MRI with multidimensional spatiotemporal-encoding in a way that provides the ability to compensate extreme field inhomogeneity. METHODS The method is called steering resonance over the object (STEREO). A modulated gradient is applied in concert with a frequency-modulated pulse to steer a resonant region through space and thus produce sequential excitation and echo formation. Images are reconstructed using exclusively an inverse problem solution. RESULTS Images of phantoms and human brain were produced to demonstrate the feasibility of the STEREO sequence and image reconstruction. Simulations support the postulated capability to compensate for extreme field inhomogeneity. CONCLUSION STEREO represents a substantial departure from conventional MRI in which spins contained in the sample, slab, or slice are excited synchronously. By exciting spins sequentially along a curved spatial trajectory, STEREO in principle affords a unique opportunity to adjust for spatial variations in static and radiofrequency fields. By adjusting field amplitudes and frequencies in a temporal manner in STEREO, in future works it should be possible to perform MRI with highly inhomogeneous fields.
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Affiliation(s)
- Angela L S Snyder
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota School of Medicine, Minneapolis, Minnesota, USA
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Ben-Eliezer N, Solomon E, Harel E, Nevo N, Frydman L. Fully refocused multi-shot spatiotemporally encoded MRI: robust imaging in the presence of metallic implants. MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE 2012; 25:433-42. [PMID: 22743822 DOI: 10.1007/s10334-012-0318-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2011] [Revised: 04/26/2012] [Accepted: 04/27/2012] [Indexed: 10/27/2022]
Abstract
OBJECT An approach has been recently introduced for acquiring arbitrary 2D NMR spectra or images in a single scan, based on the use of frequency-swept RF pulses for the sequential excitation and acquisition of the spins response. This spatiotemporal-encoding (SPEN) approach enables a unique, voxel-by-voxel refocusing of all frequency shifts in the sample, for all instants throughout the data acquisition. The present study investigates the use of this full-refocusing aspect of SPEN-based imaging in the multi-shot MRI of objects, subject to sizable field inhomogeneities that complicate conventional imaging approaches. MATERIALS AND METHODS 2D MRI experiments were performed at 7 T on phantoms and on mice in vivo, focusing on imaging in proximity to metallic objects. Fully refocused SPEN-based spin echo imaging sequences were implemented, using both Cartesian and back-projection trajectories, and compared with k-space encoded spin echo imaging schemes collected on identical samples under equal bandwidths and acquisition timing conditions. RESULTS In all cases assayed, the fully refocused spatiotemporally encoded experiments evidenced a ca. 50 % reduction in signal dephasing in the proximity of the metal, as compared to analogous results stemming from the k-space encoded spin echo counterparts. CONCLUSION The results in this study suggest that SPEN-based acquisition schemes carry the potential to overcome strong field inhomogeneities, of the kind that currently preclude high-field, high-resolution tissue characterizations in the neighborhood of metallic implants.
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Affiliation(s)
- Noam Ben-Eliezer
- Chemical Physics Department, Weizmann Institute of Science, 76100 Rehovot, Israel
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Shen J, Xiang Y. High fidelity magnetic resonance imaging by frequency sweep encoding and Fourier decoding. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2010; 204:200-207. [PMID: 20223688 PMCID: PMC2875543 DOI: 10.1016/j.jmr.2010.02.014] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2009] [Revised: 02/16/2010] [Accepted: 02/17/2010] [Indexed: 05/28/2023]
Abstract
Using a RF pulse with linear frequency sweep and a simultaneous encoding gradient, magnetization is sequentially excited accompanied by a quadratic phase profile. This quadratic dependence of magnetization phase on position dephases magnetization away from its vertices, allowing direct spatial encoding and image formation in the time domain. In this work, we show that Fourier decoding or least square fitting in combination with frequency sweep spatial encoding schemes can generate high fidelity images and we also extend spatial encoding to include nonlinear frequency sweep. Application to in vivo multiscan susceptibility-weighted imaging is demonstrated. Our results show that Fourier-decoded, spatially encoded images compare favorably with conventional high resolution images while preserving the unique features of sequential excitation.
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Affiliation(s)
- Jun Shen
- Molecular Imaging Branch, National Institute of Mental Health Intramural Research Program, NIH, Bethedsa, MD 20892-1527, USA.
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Chamberlain R, Park JY, Corum C, Yacoub E, Ugurbil K, Jack CR, Garwood M. RASER: a new ultrafast magnetic resonance imaging method. Magn Reson Med 2008; 58:794-9. [PMID: 17899612 DOI: 10.1002/mrm.21396] [Citation(s) in RCA: 73] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
A new MRI method is described to acquire a T(2)-weighted image from a single slice in a single shot. The technique is based on rapid acquisition by sequential excitation and refocusing (RASER). RASER avoids relaxation-related blurring because the magnetization is sequentially refocused in a manner that effectively creates a series of spin echoes with a constant echo time. RASER uses the quadratic phase produced by a frequency-swept chirp pulse to time-encode one dimension of the image. In another implementation the pulse can be used to excite multiple slices with phase-encoding and frequency-encoding in the other two dimensions. The RASER imaging sequence is presented along with single-shot and multislice images, and is compared to conventional spin-echo and echo-planar imaging sequences. A theoretical and empirical analysis of the spatial resolution is presented, and factors in choosing the spatial resolution for different applications are discussed. RASER produces high-quality single-shot images that are expected to be advantageous for a wide range of applications.
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Affiliation(s)
- Ryan Chamberlain
- Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota Medical School, Minneapolis, Minnesota 55455, USA
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Finsterbusch J, Frahm J. Gradient-echo line scan imaging using 2D-selective RF excitation. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2000; 147:17-25. [PMID: 11042043 DOI: 10.1006/jmre.2000.2159] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A gradient-echo line scan imaging technique was developed which employs two-dimensional spatially selective radiofrequency (2DRF) pulses for consecutively exciting individual columns of transverse magnetization, i.e., image lines. Although a variety of trajectories are possible for 2DRF excitation, the current implementation involved a blipped-planar trajectory in conjunction with additional saturation RF pulses to suppress side excitations above and below the desired image section, i.e., along the blip direction of the 2DRF pulse. Human brain imaging at 2.0 T (Siemens Vision, Erlangen, Germany) resulted in measuring times of 5.2 s for a 5-mm section at 1.0 x 1.0 mm in-plane resolution. Functional neuroimaging of the motor cortex at 1.2 s temporal resolution and 0.78 x 1.56 mm in-plane resolution exploited the capability of imaging inner volumes (here a 25-mm strip) without signal aliasing.
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Affiliation(s)
- J Finsterbusch
- Biomedizinische NMR Forschungs GmbH am, Max-Planck-Institut für Biophysikalische Chemie, Göttingen, 37070, Germany.
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Finsterbusch J, Frahm J. Single-shot line scan imaging using stimulated echoes. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 1999; 137:144-153. [PMID: 10053143 DOI: 10.1006/jmre.1998.1642] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A new high-speed MRI method is described for single-shot line scan imaging (LSI) based on stimulated echoes (STE). To allow for multislice imaging, the technique comprises a series of slice-selective preparation pulses (each corresponding to the first RF pulse of a STE sequence), a slab-selective refocusing pulse (second RF pulse), and multiple line-selective read pulses (third RF pulses). An alternative version employs packages of two slice-selective pulses followed by multiple line-selective read pulses. Experimental applications deal with human brain imaging on a clinical MRI system at 2.0 T. The technique offers user-selectable trade-offs between volume coverage (1-15 sections) and in-plane spatial resolution (1-5 mm linear pixel dimension) within total acquisition times of less than 500 ms. Although LSI yields a lower signal-to-noise ratio than Fourier imaging, single-shot LSI with STEs is free from resonance offset effects (e.g., magnetic field inhomogeneities and susceptibility differences) that are typical for echo-planar imaging. Moreover, the technique exhibits considerable robustness against motion and provides access to arbitrary fields-of-view, i.e., localized imaging of inner volumes without aliasing artifacts due to phase wrapping.
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Affiliation(s)
- J Finsterbusch
- Biomedizinische NMR Forschungs GmbH am, Max-Planck-Institut für biophysikalische Chemie, Göttingen, D-37070, Germany
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Meyerand ME, Moritz CH, Wong EC. Single-shot, motion insensitive cardiac imaging on a standard clinical system. Magn Reson Med 1998; 40:930-3. [PMID: 9840839 DOI: 10.1002/mrm.1910400620] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The overall goal of this study was the development and application of a less motion sensitive, single-shot MRI technique for use on a standard clinical system in a dynamic imaging setting, such as cardiac scanning. Time encoding, a single-shot line scanning technique, has been used to produce single-shot, small field-of-view cardiac images without the use of presaturation pulses. The major advantages of this method are: (1) as a line scanning technique, time encoding is minimally sensitive to motion when compared with 2D Fourier methods, and (2) aliasing will not occur if the object being imaged extends beyond the field of view.
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Affiliation(s)
- M E Meyerand
- Biophysics Research Institute, Medical College of Wisconsin, Milwaukee, USA
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Abstract
A new double line scan diffusion imaging sequence (DLSDI) is presented. In DLSDI, two lines from two separate slices are acquired in each shot. As its predecessor, LSDI, DLSDI is insensitive to motion artifacts and it can be used on conventional MR scanners. In addition, DLSDI is almost twice as fast as LSDI. Preliminary results from phantom and patient studies show excellent agreement between ADC trace maps obtained with DLSDI and LSDI. The technical and the theoretical aspects of DLSDI are studied, and it is shown how the conditional random walk model can be used as an analytical tool to derive the diffusion sensitivity in the DLSDI sequence.
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Affiliation(s)
- H Gudbjartsson
- Brigham and Women's Hospital, Harvard Medical School, Department of Radiology, Boston, MA, USA
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