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Allen TJ, Henze Bancroft LC, Wang K, Wang PN, Unal O, Estkowski LD, Cashen TA, Bayram E, Strigel RM, Holmes JH. Automated Placement of Scan and Pre-Scan Volumes for Breast MRI Using a Convolutional Neural Network. Tomography 2023; 9:967-980. [PMID: 37218939 PMCID: PMC10204486 DOI: 10.3390/tomography9030079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 05/04/2023] [Accepted: 05/06/2023] [Indexed: 05/24/2023] Open
Abstract
Graphically prescribed patient-specific imaging volumes and local pre-scan volumes are routinely placed by MRI technologists to optimize image quality. However, manual placement of these volumes by MR technologists is time-consuming, tedious, and subject to intra- and inter-operator variability. Resolving these bottlenecks is critical with the rise in abbreviated breast MRI exams for screening purposes. This work proposes an automated approach for the placement of scan and pre-scan volumes for breast MRI. Anatomic 3-plane scout image series and associated scan volumes were retrospectively collected from 333 clinical breast exams acquired on 10 individual MRI scanners. Bilateral pre-scan volumes were also generated and reviewed in consensus by three MR physicists. A deep convolutional neural network was trained to predict both the scan and pre-scan volumes from the 3-plane scout images. The agreement between the network-predicted volumes and the clinical scan volumes or physicist-placed pre-scan volumes was evaluated using the intersection over union, the absolute distance between volume centers, and the difference in volume sizes. The scan volume model achieved a median 3D intersection over union of 0.69. The median error in scan volume location was 2.7 cm and the median size error was 2%. The median 3D intersection over union for the pre-scan placement was 0.68 with no significant difference in mean value between the left and right pre-scan volumes. The median error in the pre-scan volume location was 1.3 cm and the median size error was -2%. The average estimated uncertainty in positioning or volume size for both models ranged from 0.2 to 3.4 cm. Overall, this work demonstrates the feasibility of an automated approach for the placement of scan and pre-scan volumes based on a neural network model.
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Affiliation(s)
- Timothy J. Allen
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705, USA
| | - Leah C. Henze Bancroft
- Department of Radiology, University of Wisconsin-Madison, 600 Highland Avenue, Madison, WI 53792, USA
| | - Kang Wang
- GE Healthcare, 3000 N Grandview Blvd, Waukesha, WI 53188, USA
| | - Ping Ni Wang
- GE Healthcare, 3000 N Grandview Blvd, Waukesha, WI 53188, USA
| | - Orhan Unal
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705, USA
- Department of Radiology, University of Wisconsin-Madison, 600 Highland Avenue, Madison, WI 53792, USA
| | | | - Ty A. Cashen
- GE Healthcare, 3000 N Grandview Blvd, Waukesha, WI 53188, USA
| | - Ersin Bayram
- GE Healthcare, 3000 N Grandview Blvd, Waukesha, WI 53188, USA
| | - Roberta M. Strigel
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705, USA
- Department of Radiology, University of Wisconsin-Madison, 600 Highland Avenue, Madison, WI 53792, USA
- Carbone Cancer Center, University of Wisconsin-Madison, 600 Highland Avenue, Madison, WI 53792, USA
| | - James H. Holmes
- Department of Radiology, University of Iowa, 169 Newton Road, Iowa City, IA 52242, USA
- Department of Biomedical Engineering, University of Iowa, 3100 Seamans Center, Iowa City, IA 52242, USA
- Holden Comprehensive Cancer Center, University of Iowa, 200 Hawkins Drive, Iowa City, IA 52242, USA
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Ren ZH, Stockmann J, Dewdney A, Lee RF. Hybrid active and passive local shimming (HAPLS) for two-region MRI. Magn Reson Med 2023; 89:1660-1673. [PMID: 36441786 PMCID: PMC10181861 DOI: 10.1002/mrm.29542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Revised: 10/28/2022] [Accepted: 11/11/2022] [Indexed: 11/29/2022]
Abstract
PURPOSE An MRI scanner is equipped with global shim systems for shimming one region of interest (ROI) only. However, it often fails to reach state-of-the-art when shimming two isolated regions of interest simultaneously, even though the two-area shimming can be essential in scan scenarios, such as bilateral breasts or dyadic brains. To address these challenges, a hybrid active and passive local shimming technique is proposed to simultaneously shim two isolated region-of-interest areas within the whole FOV. METHODS A local passive shimming system is constructed by optimized bilateral ferromagnetic chip arrays to compensate for the magnet's significant high-order B0 inhomogeneities at the boundary of the manufacturer's specified homogeneous volume, thus locally improving the available FOV. The local active shimming consists of 40-channel DC loops powered by 64-channel current amplifiers. With the optimized current distribution, active shimming can correct the residual low-order B0 inhomogeneities and subject-specific field inhomogeneities. In addition, active shimming is used to homogenize the center frequencies of the two regions. RESULTS With the implementation of the hybrid active and passive local shimming, the 95% peak-to-peak was reduced from 1.92 to 1.12 ppm by 41.7%, and RMS decreased from 0.473 to 0.255 ppm by 46.1% in a two-phantom experiment. The volume ratio containing MR voxels within a 0.5-ppm frequency span increased from 64.3% to 81.3% by 26.3%. CONCLUSION The proposed hybrid active and passive local shimming technique uses both passive and active local shimming, and it can efficiently shim two areas simultaneously, which is an unmet need for a commercial MRI scanner.
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Affiliation(s)
- Zhi Hua Ren
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Jason Stockmann
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
- Harvard Medical School, Boston, MA, USA
| | | | - Ray F. Lee
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
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Diffusion tensor imaging on 3-T MRI breast: diagnostic performance in comparison to diffusion-weighted imaging. THE EGYPTIAN JOURNAL OF RADIOLOGY AND NUCLEAR MEDICINE 2021. [DOI: 10.1186/s43055-021-00473-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
Abstract
Background
Breast cancer is the most prevalent cancer among females. Dynamic contrast-enhanced MRI (DCE-MRI) breast is highly sensitive (90%) in the detection of breast cancer. Despite its high sensitivity in detecting breast cancer, its specificity (72%) is moderate. Owing to 3-T breast MRI which has the advantage of a higher signal to noise ratio and shorter scanning time rather than the 1.5-T MRI, the adding of new techniques as diffusion tensor imaging (DTI) to breast MRI became more feasible.
Diffusion-weighted imaging (DWI) which tracks the diffusion of the tissue water molecule as well as providing data about the integrity of the cell membrane has been used as a valuable additional tool of DCE-MRI to increase its specificity.
Based on DWI, more details about the microstructure could be detected using diffusion tensor imaging. The DTI applies diffusion in many directions so apparent diffusion coefficient (ADC) will vary according to the measured direction raising its sensitivity to microstructure elements and cellular density. This study aimed to investigate the diagnostic accuracy of DTI in the assessment of breast lesions in comparison to DWI.
Results
By analyzing the data of the 50 cases (31 malignant cases and 19 benign cases), the sensitivity and specificity of DWI in differentiation between benign and malignant lesions were about 90% and 63% respectively with PPV 90% and NPV 62%, while the DTI showed lower sensitivity and specificity about 81% and 51.7%, respectively, with PPV 78.9% and NPV 54.8% (P-value ≤ 0.05).
Conclusion
While the DWI is still the most established diffusion parameter, DTI may be helpful in the further characterization of tumor microstructure and differentiation between benign and malignant breast lesions.
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Fat unsaturation measures in tibial, subcutaneous and breast adipose tissue using short and long TE MRS at 3 T. Magn Reson Imaging 2021; 86:61-69. [PMID: 34808305 DOI: 10.1016/j.mri.2021.11.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Revised: 09/30/2021] [Accepted: 11/15/2021] [Indexed: 11/22/2022]
Abstract
Fat unsaturation and poly-unsaturation measures can be obtained in vivo with magnetic resonance spectroscopy (MRS) through the olefinic (≈5.4 ppm) and diallylic (≈2.8 ppm) resonances, respectively. Long echo time (TE) MRS sequences have been previously optimized for olefinic/methylene (≈1.3 ppm) or olefinic/methyl (≈0.9 ppm) measures. The objectives of this work, using a Point RESolved Spectroscopy (PRESS) sequence, are to: 1) Investigate olefinic, methyl and methylene resonance decay in subcutaneous, tibial, and breast adipose tissue to determine if a direct comparison of unsaturation measures can be made without correction for T2 losses. 2) Assess intra-individual fat unsaturation and poly-unsaturation measures in the three adipose tissues. 3) Estimate correction factors for olefinic to methylene ratios to compensate for J-coupling and T2 relaxation losses that take place when increasing PRESS TE from 40 ms to 200 ms (previously optimized long-TE). 4) Investigate the utility of an inversion recovery for resolving the olefinic resonance from water in adipose tissue. PRESS spectra were acquired from the three adipose regions (breast in female only) in healthy volunteers at 3 T. It was found that olefinic and methyl signal decays faster in breast tissue compared to in tibial bone marrow. Poly-unsaturation measures (diallylic/methylene) differ for tibial bone marrow compared to subcutaneous and breast adipose tissue, with average values of 1.7 ± 0.4, 2.2 ± 0.4, and 2.3 ± 0.8%, respectively. PRESS (TE = 40 ms) with an inversion recovery resolves the olefinic and water resonances in breast tissue with a signal to noise ratio approximately six times greater than that using PRESS with a TE of 200 ms. Stimulated Echo Acquisition Mode (STEAM) with a TE of 20 ms (mixing time of 20 ms) was also combined with IR to resolve the olefinic resonance from that of water is spinal bone marrow.
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Optimisation of T2 and T2* sequences in MRI for better quantification of iron on transfused dependent sickle cell patients. Sci Rep 2021; 11:8513. [PMID: 33875765 PMCID: PMC8055987 DOI: 10.1038/s41598-021-88116-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Accepted: 04/07/2021] [Indexed: 11/08/2022] Open
Abstract
This work aimed to investigate the effect of different shim techniques, voxel sizes, and repetition time (TR) on using theT2 and T2* sequences to determine their optimum settings to investigate the quantification of iron in transfused dependent sickle cell patients. The effect of each of these parameters was investigated on phantoms of different Gadolinium (Gd) concentrations, on 10 volunteers and 25 patients using a1 5T MRI Philips scanner. No significant difference between the three shim techniques was noticed in either T2 or T2* sequence measurements. Pixel sizes of 1 × 1 and 2 × 2 mm provided optimum results for T2 measurements. At 1 × 1 mm pixel size the T2* measurements experienced less error in measurements than the size of 2.5 × 2.5 mm used in the literature. Even though the slice thickness variation did not provide any changes in T2 measurements, the 12 mm provided optimum T2* measurements. TR variation did not yield significant changes on either T2 or T2* measurements. These results indicate that both T2 and T2* sequences can be further improved by providing more reliable measurements and reducing acquisition time.
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Xu F, Li W, Liu D, Zhu D, Schär M, Myers K, Qin Q. A novel spectrally selective fat saturation pulse design with robustness to B 0 and B 1 inhomogeneities: A demonstration on 3D T 1-weighted breast MRI at 3 T. Magn Reson Imaging 2020; 75:156-161. [PMID: 33130057 DOI: 10.1016/j.mri.2020.10.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2020] [Revised: 10/25/2020] [Accepted: 10/26/2020] [Indexed: 12/01/2022]
Abstract
PURPOSE Spectrally selective fat saturation (FatSat) sequence is commonly used to suppress signal from adipose tissue. Conventional SINC-shaped pulses are sensitive to B0 off-resonance and B1+ offset. Uniform fat saturation with large spatial coverage is especially challenging for the body and breast MRI. The aim of this study is to develop spectrally selective FatSat pulses that offer more immunity to B0/B1+ field inhomogeneities than SINC pulses and evaluate them in bilateral breast imaging at 3 T. MATERIALS AND METHODS Optimized composite pulses (OCP) were designed based on the optimal control theory with robustness to a targeted B0/ B1+ conditions. OCP pulses also allows flexible flip angles to meet different requirements. Comparisons with the vendor-provided SINC pulses were conducted by numerical simulation and in vivo scans using a 3D T1-weighted (T1w) gradient-echo (GRE) sequence with coverage of the whole-breast. RESULTS Simulation revealed that OCP pulses yielded almost half of the transition band and much less sensitivity to B1+ inhomogeneity compared to SINC pulses with B0 off-resonance within ±200 Hz and B1+ scale error within ±0.3 (P < 0.001). Across five normal subjects, OCP FatSat pulses produced 25-41% lower residual fat signals (P < 0.05) with 27-36% less spatial variation (P < 0.05) than SINC. CONCLUSION In contrast to conventional SINC-shaped pulses, the newly designed OCP FatSat pulses mitigated challenges of wide range of B0/ B1+ field inhomogeneities and achieved more uniform fat suppression in bilateral breast T1w imaging at 3 T.
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Affiliation(s)
- Feng Xu
- The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, USA; F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, MD, USA.
| | - Wenbo Li
- The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, USA; F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, MD, USA
| | - Dapeng Liu
- The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, USA; F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, MD, USA
| | - Dan Zhu
- Biomedical Engineering, Johns Hopkins School of Medicine, Baltimore, MD, USA
| | - Michael Schär
- The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, USA
| | - Kelly Myers
- The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, USA
| | - Qin Qin
- The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, USA; F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, MD, USA
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Tan ET, Wilmes LJ, Joe BN, Onishi N, Arasu VA, Hylton NM, Marinelli L, Newitt DC. Denoising and Multiple Tissue Compartment Visualization of Multi-b-Valued Breast Diffusion MRI. J Magn Reson Imaging 2020; 53:271-282. [PMID: 32614125 DOI: 10.1002/jmri.27268] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Revised: 06/10/2020] [Accepted: 06/11/2020] [Indexed: 02/01/2023] Open
Abstract
BACKGROUND Multi-b-valued/multi-shell diffusion provides potentially valuable metrics in breast MRI but suffers from low signal-to-noise ratio and has potentially long scan times. PURPOSE To investigate the effects of model-based denoising with no loss of spatial resolution on multi-shell breast diffusion MRI; to determine the effects of downsampling on multi-shell diffusion; and to quantify these effects in multi-b-valued (three directions per b-value) acquisitions. STUDY TYPE Prospective ("fully-sampled" multi-shell) and retrospective longitudinal (multi-b). SUBJECTS One normal subject (multi-shell) and 10 breast cancer subjects imaging at four timepoints (multi-b). FIELD STRENGTH/SEQUENCE 3T multi-shell acquisition and 1.5T multi-b acquisition. ASSESSMENT The "fully-sampled" multi-shell acquisition was retrospectively downsampled to determine the bias and error from downsampling. Mean, axial/parallel, radial diffusivity, and fractional anisotropy (FA) were analyzed. Denoising was applied retrospectively to the multi-b-valued breast cancer subject dataset and assessed subjectively for image noise level and tumor conspicuity. STATISTICAL TESTS Parametric paired t-test (P < 0.05 considered statistically significant) on mean and coefficient of variation of each metric-the apparent diffusion coefficient (ADC) from all b-values, fast ADC, slow ADC, and perfusion fraction. Paired and two-sample t-tests for each metric comparing normal and tumor tissue. RESULTS In the multi-shell data, denoising effectively suppressed FA (-45% to -78%), with small biases in mean diffusivity (-5% in normal, +23% in tumor, and -4% in vascular compartments). In the multi-b data, denoising resulted in small biases to the ADC metrics in tumor and normal contralateral tissue (by -3% to +11%), but greatly reduced the coefficient of variation for every metric (by -1% to -24%). Denoising improved differentiation of tumor and normal tissue regions in most metrics and timepoints; subjectively, image noise level and tumor conspicuity were improved in the fast ADC maps. DATA CONCLUSION Model-based denoising effectively suppressed erroneously high FA and improved the accuracy of diffusivity metrics. EVIDENCE LEVEL 3 TECHNICAL EFFICACY STAGE: 1.
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Affiliation(s)
- Ek T Tan
- GE Global Research, Niskayuna, New York, USA.,Department of Radiology and Imaging, Hospital for Special Surgery, New York, New York, USA
| | - Lisa J Wilmes
- Department of Radiology, University of California, San Francisco, California, USA
| | - Bonnie N Joe
- Department of Radiology, University of California, San Francisco, California, USA
| | - Natsuko Onishi
- Department of Radiology, University of California, San Francisco, California, USA
| | - Vignesh A Arasu
- Department of Radiology, University of California, San Francisco, California, USA.,Department of Radiology, Kaiser Permanente Medical Center, Vallejo, California, USA.,Division of Research, Kaiser Permanente Northern California, Oakland, California, USA
| | - Nola M Hylton
- Department of Radiology, University of California, San Francisco, California, USA
| | | | - David C Newitt
- Department of Radiology, University of California, San Francisco, California, USA
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Zhou W, Favazza CP, Axmacher JA, Trzasko JD, Geske JR, Lee CU. Evaluation of Shimming Techniques on MRI Breast Image Quality at 1.5T. JOURNAL OF BREAST IMAGING 2019; 1:199-204. [PMID: 38424766 DOI: 10.1093/jbi/wbz045] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2019] [Indexed: 03/02/2024]
Abstract
OBJECTIVE The quality of all clinical MRI is dependent on B0 homogeneity, which is optimized during the shimming part of a prescan or preparatory phase before image acquisition. The purpose of this study was to assess shimming techniques clinically employed for breast MRI across our practice, and to determine factors that correlate with higher image quality for contrast-enhanced breast MRI at 1.5T. METHODS One hundred consecutive female patients were retrospectively collected with Institutional Review Board approval. Shimming-related parameters, including shim-box placement and shimming gradient offsets were extracted from prior contrast-enhanced 3D fat-suppressed T1-weighted gradient echo image acquisitions. Three breast radiologists evaluated these images for fat saturation, breast density, overall image quality, and artifacts. Technologist experience was also evaluated for variability of shimming. Generalized linear mixed models were used to compare acquisition parameters between fat saturation. P < 0.05 was considered as statistical significance. RESULTS The percentage of soft tissue inside the field of view (FOV) (ie, Tissue/FOV) in the good fat-saturation group (0.37 ± 0.06) was significantly lower (P < 0.01) than that in the poor fat-saturation group (0.39 ± 0.06). Other shimming-related parameters were found not significantly affecting the fat-saturation outcomes. Technologists with more experience tended to have less variable shimming performance than junior technologists did. CONCLUSIONS The quality of clinical MRI and especially breast MRI is highly dependent on shimming. Decreasing Tissue/FOV was associated with good image quality (good fat saturation). Optimization of shimming may require manual shimming or higher-order field-correction strategies.
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Affiliation(s)
- Wei Zhou
- Mayo Clinic, Department of Radiology, Rochester, MN
| | | | | | | | - Jennifer R Geske
- Mayo Clinic, Department of Biomedical Statistics and Informatics, Rochester, MN
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Krikken E, van der Kemp WJ, Khlebnikov V, van Dalen T, Los M, van Laarhoven HW, Luijten PR, van den Bosch MA, Klomp DW, Wijnen JP. Contradiction between amide-CEST signal and pH in breast cancer explained with metabolic MRI. NMR IN BIOMEDICINE 2019; 32:e4110. [PMID: 31136039 PMCID: PMC6772111 DOI: 10.1002/nbm.4110] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Revised: 04/08/2019] [Accepted: 04/09/2019] [Indexed: 06/09/2023]
Abstract
PURPOSE Metabolic MRI is a noninvasive technique that can give new insights into understanding cancer metabolism and finding biomarkers to evaluate or monitor treatment plans. Using this technique, a previous study has shown an increase in pH during neoadjuvant chemotherapy (NAC) treatment, while recent observation in a different study showed a reduced amide proton transfer (APT) signal during NAC treatment (negative relation). These findings are counterintuitive, given the known intrinsic positive relation of APT signal to pH. METHODS In this study we combined APT MRI and 31 P-MRSI measurements to unravel the relation between the APT signal and pH in breast cancer. Twenty-two breast cancer patients were scanned with a 7 T MRI before and after the first cycle of NAC treatment. pH was determined by the chemical shift of inorganic phosphate (Pi). RESULTS While APT signals have a positive relation to pH and amide content, we observed a direct negative linear correlation between APT signals and pH in breast tumors in vivo. CONCLUSIONS As differentiation of cancer stages was confirmed by observation of a linear correlation between cell proliferation marker PE/Pi (phosphoethanolamine over inorganic phosphate) and pH in the tumor, our data demonstrates that the concentration of mobile proteins likely supersedes the contribution of the exchange rate to the APT signal.
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Affiliation(s)
- Erwin Krikken
- Department of RadiologyUniversity Medical Center UtrechtUtrechtThe Netherlands
| | | | - Vitaliy Khlebnikov
- Department of RadiologyUniversity Medical Center UtrechtUtrechtThe Netherlands
| | | | - Maartje Los
- Department of Medical OncologySt. Antonius ZiekenhuisNieuwegein/UtrechtThe Netherlands
| | - Hanneke W.M. van Laarhoven
- Department of Medical Oncology, Academic Medical Centre AmsterdamCancer Center AmsterdamAmsterdamThe Netherlands
| | - Peter R. Luijten
- Department of RadiologyUniversity Medical Center UtrechtUtrechtThe Netherlands
| | | | - Dennis W.J. Klomp
- Department of RadiologyUniversity Medical Center UtrechtUtrechtThe Netherlands
| | - Jannie P. Wijnen
- Department of RadiologyUniversity Medical Center UtrechtUtrechtThe Netherlands
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10
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Krikken E, van der Kemp WJM, van Diest PJ, van Dalen T, van Laarhoven HWM, Luijten PR, Klomp DWJ, Wijnen JP. Early detection of changes in phospholipid metabolism during neoadjuvant chemotherapy in breast cancer patients using phosphorus magnetic resonance spectroscopy at 7T. NMR IN BIOMEDICINE 2019; 32:e4086. [PMID: 30924571 PMCID: PMC6593799 DOI: 10.1002/nbm.4086] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2018] [Revised: 02/11/2019] [Accepted: 02/11/2019] [Indexed: 05/14/2023]
Abstract
The purpose of this work was to investigate whether noninvasive early detection (after the first cycle) of response to neoadjuvant chemotherapy (NAC) in breast cancer patients was possible. 31 P-MRSI at 7 T was used to determine different phosphor metabolites ratios and correlate this to pathological response. 31 P-MRSI was performed in 12 breast cancer patients treated with NAC. 31 P spectra were fitted and aligned to the frequency of phosphoethanolamine (PE). Metabolic signal ratios for phosphomonoesters/phosphodiesters (PME/PDE), phosphocholine/glycerophosphatidylcholine (PC/GPtC), phosphoethanolamine/glycerophosphoethanolamine (PE/GPE) and phosphomonoesters/in-organic phosphate (PME/Pi) were determined from spectral fitting of the individual spectra and the summed spectra before and after the first cycle of NAC. Metabolic ratios were subsequently related to pathological response. Additionally, the correlation between the measured metabolic ratios and Ki-67 levels was determined using linear regression. Four patients had a pathological complete response after treatment, five patients a partial pathological response, and three patients did not respond to NAC. In the summed spectrum after the first cycle of NAC, PME/Pi and PME/PDE decreased by 18 and 13%, respectively. A subtle difference among the different response groups was observed in PME/PDE, where the nonresponders showed an increase and the partial and complete responders a decrease (P = 0.32). No significant changes in metabolic ratios were found. However, a significant association between PE/Pi and the Ki-67 index was found (P = 0.03). We demonstrated that it is possible to detect subtle changes in 31 P metabolites with a 7 T MR system after the first cycle of NAC treatment in breast cancer patients. Nonresponders showed different changes in metabolic ratios compared with partial and complete responders, in particular for PME/PDE; however, more patients need to be included to investigate its clinical value.
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Affiliation(s)
- Erwin Krikken
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Wybe J M van der Kemp
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Paul J van Diest
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Thijs van Dalen
- Department of Surgery, Diakonessenhuis, Utrecht, The Netherlands
| | | | - Peter R Luijten
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Dennis W J Klomp
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Jannie P Wijnen
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
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11
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Fardanesh R, Marino MA, Avendano D, Leithner D, Pinker K, Thakur SB. Proton MR spectroscopy in the breast: Technical innovations and clinical applications. J Magn Reson Imaging 2019; 50:1033-1046. [PMID: 30848037 DOI: 10.1002/jmri.26700] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Accepted: 02/20/2019] [Indexed: 01/27/2023] Open
Abstract
Proton magnetic resonance spectroscopy (MRS) is a promising noninvasive diagnostic technique for investigation of breast cancer metabolism. Spectroscopic imaging data may be obtained following contrast-enhanced MRI by applying the point-resolved spectroscopy sequence (PRESS) or the stimulated echo acquisition mode (STEAM) sequence from the MR voxel encompassing the breast lesion. Total choline signal (tCho) measured in vivo using either a qualitative or quantitative approach has been used as a diagnostic test in the workup of malignant breast lesions. In addition to tCho metabolites, other relevant metabolites, including multiple lipids, can be detected and monitored. MRS has been heavily investigated as an adjunct to morphologic and dynamic MRI to improve diagnostic accuracy in breast cancer, obviating unnecessary benign biopsies. Besides its use in the staging of breast cancer, other promising applications have been recently investigated, including the assessment of treatment response and therapy monitoring. This review provides guidance on spectroscopic acquisition and quantification methods and highlights current and evolving clinical applications of proton MRS. Level of Evidence 5 Technical Efficacy: Stage 5 J. Magn. Reson. Imaging 2019.
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Affiliation(s)
- Reza Fardanesh
- Department of Radiology, Breast Imaging Service, Memorial Sloan Kettering Cancer Center, New York, New York, USA
| | - Maria Adele Marino
- Department of Radiology, Breast Imaging Service, Memorial Sloan Kettering Cancer Center, New York, New York, USA.,Department of Biomedical Sciences and Morphologic and Functional Imaging, Policlinico Universitario G. Martino, University of Messina, Italy
| | - Daly Avendano
- Department of Radiology, Breast Imaging Service, Memorial Sloan Kettering Cancer Center, New York, New York, USA
| | - Doris Leithner
- Department of Radiology, Breast Imaging Service, Memorial Sloan Kettering Cancer Center, New York, New York, USA
| | - Katja Pinker
- Department of Radiology, Breast Imaging Service, Memorial Sloan Kettering Cancer Center, New York, New York, USA.,Department of Biomedical Imaging and Image-guided Therapy, Division of Molecular and Gender Imaging, Medical University of Vienna, Vienna, Austria
| | - Sunitha B Thakur
- Department of Radiology, Breast Imaging Service, Memorial Sloan Kettering Cancer Center, New York, New York, USA.,Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, New York, USA
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Kousi E, O'Flynn EAM, Borri M, Morgan VA, deSouza NM, Schmidt MA. Pre-treatment functional MRI of breast cancer: T2* evaluation at 3 T and relationship to dynamic contrast-enhanced and diffusion-weighted imaging. Magn Reson Imaging 2018; 52:53-61. [PMID: 29859948 DOI: 10.1016/j.mri.2018.05.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Revised: 05/30/2018] [Accepted: 05/30/2018] [Indexed: 12/11/2022]
Abstract
PURPOSE Baseline T2* relaxation time has been proposed as an imaging biomarker in cancer, in addition to Dynamic Contrast-Enhanced (DCE) MRI and diffusion-weighted imaging (DWI) parameters. The purpose of the current work is to investigate sources of error in T2* measurements and the relationship between T2* and DCE and DWI functional parameters in breast cancer. METHODS Five female volunteers and thirty-two women with biopsy proven breast cancer were scanned at 3 T, with Research Ethics Committee approval. T2* values of the normal breast were acquired from high-resolution, low-resolution and fat-suppressed gradient-echo sequences in volunteers, and compared. In breast cancer patients, pre-treatment T2*, DCE MRI and DWI were performed at baseline. Pathologically complete responders at surgery and non-responders were identified and compared. Principal component analysis (PCA) and cluster analysis (CA) were performed. RESULTS There were no significant differences between T2* values from high-resolution, low-resolution and fat-suppressed datasets (p > 0.05). There were not significant differences between baseline functional parameters in responders and non-responders (p > 0.05). However, there were differences in the relationship between T2* and contrast-agent uptake in responders and non-responders. Voxels of similar characteristics were grouped in 5 clusters, and large intra-tumoural variations of all parameters were demonstrated. CONCLUSION Breast T2* measurements at 3 T are robust, but spatial resolution should be carefully considered. T2* of breast tumours at baseline is unrelated to DCE and DWI parameters and contribute towards describing functional heterogeneity of breast tumours.
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Affiliation(s)
- Evanthia Kousi
- CR-UK and EPSRC Cancer Imaging Centre, Royal Marsden NHS Foundation Trust and Institute of Cancer Research, Sutton, Surrey SM2 5PT, United Kingdom.
| | - Elizabeth A M O'Flynn
- CR-UK and EPSRC Cancer Imaging Centre, Royal Marsden NHS Foundation Trust and Institute of Cancer Research, Sutton, Surrey SM2 5PT, United Kingdom
| | - Marco Borri
- CR-UK and EPSRC Cancer Imaging Centre, Royal Marsden NHS Foundation Trust and Institute of Cancer Research, Sutton, Surrey SM2 5PT, United Kingdom
| | - Veronica A Morgan
- CR-UK and EPSRC Cancer Imaging Centre, Royal Marsden NHS Foundation Trust and Institute of Cancer Research, Sutton, Surrey SM2 5PT, United Kingdom
| | - Nandita M deSouza
- CR-UK and EPSRC Cancer Imaging Centre, Royal Marsden NHS Foundation Trust and Institute of Cancer Research, Sutton, Surrey SM2 5PT, United Kingdom
| | - Maria A Schmidt
- CR-UK and EPSRC Cancer Imaging Centre, Royal Marsden NHS Foundation Trust and Institute of Cancer Research, Sutton, Surrey SM2 5PT, United Kingdom
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Krikken E, Khlebnikov V, Zaiss M, Jibodh RA, van Diest PJ, Luijten PR, Klomp DWJ, van Laarhoven HWM, Wijnen JP. Amide chemical exchange saturation transfer at 7 T: a possible biomarker for detecting early response to neoadjuvant chemotherapy in breast cancer patients. Breast Cancer Res 2018; 20:51. [PMID: 29898745 PMCID: PMC6001024 DOI: 10.1186/s13058-018-0982-2] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Accepted: 05/10/2018] [Indexed: 12/31/2022] Open
Abstract
BACKGROUND The purpose of this work was to investigate noninvasive early detection of treatment response of breast cancer patients to neoadjuvant chemotherapy (NAC) using chemical exchange saturation transfer (CEST) measurements sensitive to amide proton transfer (APT) at 7 T. METHODS CEST images were acquired in 10 tumors of nine breast cancer patients treated with NAC. APT signals in the tumor, before and after the first cycle of NAC, were quantified using a three-pool Lorentzian fit of the z-spectra in the region of interest. The changes in APT were subsequently related to pathological response after surgery defined by the Miller-Payne system. RESULTS Significant differences (P < 0.05, unpaired Mann-Whitney test) were found in the APT signal before and after the first cycle of NAC in six out of 10 lesions, of which two showed a pathological complete response. Of the remaining four lesions, one showed a pathological complete response. No significant difference in changes of APT signal were found between the different pathological responses to NAC treatment (P > 0.05, Kruskal-Wallis test). CONCLUSIONS This preliminary study shows the feasibility of using APT CEST magnetic resonance imaging as a noninvasive biomarker to assess the effect of NAC in an early stage of NAC treatment of breast cancer patients. TRIAL REGISTRATION Registration number, NL49333.041.14/ NTR4980 . Registered on 16 October 2014.
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Affiliation(s)
- Erwin Krikken
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Vitaliy Khlebnikov
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Moritz Zaiss
- Max Planck Institute for Biological Cybernetics, Tübingen, Germany
| | - Rajni A. Jibodh
- Department of Medical Oncology, Academic Medical Centre Amsterdam, Amsterdam, The Netherlands
| | - Paul J. van Diest
- Department of Pathology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Peter R. Luijten
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | - Dennis W. J. Klomp
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
| | | | - Jannie P. Wijnen
- Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
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An Apparent Diffusion Coefficient Histogram Method Versus a Traditional 2-Dimensional Measurement Method for Identifying Non–Puerperal Mastitis From Breast Cancer at 3.0 T. J Comput Assist Tomogr 2018; 42:776-783. [DOI: 10.1097/rct.0000000000000758] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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15
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Kousi E, Smith J, Ledger AE, Scurr E, Allen S, Wilson RM, O'Flynn E, Pope RJ, Leach MO, Schmidt MA. Quantitative evaluation of contrast agent uptake in standard fat-suppressed dynamic contrast-enhanced MRI examinations of the breast. Med Phys 2018; 45:287-296. [PMID: 29095484 PMCID: PMC5814859 DOI: 10.1002/mp.12652] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2016] [Revised: 10/24/2017] [Accepted: 10/24/2017] [Indexed: 12/24/2022] Open
Abstract
PURPOSE To propose a method to quantify T1 and contrast agent uptake in breast dynamic contrast-enhanced (DCE) examinations undertaken with standard clinical fat-suppressed MRI sequences and to demonstrate the proposed approach by comparing the enhancement characteristics of lobular and ductal carcinomas. METHODS A standard fat-suppressed DCE of the breast was performed at 1.5 T (Siemens Aera), followed by the acquisition of a proton density (PD)-weighted sequence, also fat suppressed. Both sequences were characterized with test objects (T1 ranging from 30 ms to 2,400 ms) and calibration curves were obtained to enable T1 calculation. The reproducibility and accuracy of the calibration curves were also investigated. Healthy volunteers and patients were scanned with Ethics Committee approval. The effect of B0 field inhomogeneity was assessed in test objects and healthy volunteers. The T1 of breast tumors was calculated at different time points (pre-, peak-, and post-contrast agent administration) for 20 patients, pre-treatment (10 lobular and 10 ductal carcinomas) and the two cancer types were compared (Wilcoxon rank-sum test). RESULTS The calibration curves proved to be highly reproducible (coefficient of variation under 10%). T1 measurements were affected by B0 field inhomogeneity, but frequency shifts below 50 Hz introduced only 3% change to fat-suppressed T1 measurements of breast parenchyma in volunteers. The values of T1 measured pre-, peak-, and post-contrast agent administration demonstrated that the dynamic range of the DCE sequence was correct, that is, image intensity is approximately directly proportional to 1/T1 for that range. Significant differences were identified in the width of the distributions of the post-contrast T1 values between lobular and ductal carcinomas (P < 0.05); lobular carcinomas demonstrated a wider range of post-contrast T1 values, potentially related to their infiltrative growth pattern. CONCLUSIONS This work has demonstrated the feasibility of fat-suppressed T1 measurements as a tool for clinical studies. The proposed quantitative approach is practical, enabled the detection of differences between lobular and invasive ductal carcinomas, and further enables the optimization of DCE protocols by tailoring the dynamic range of the sequence to the values of T1 measured.
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Affiliation(s)
- Evanthia Kousi
- CR‐UK and EPSRC Cancer Imaging CentreRoyal Marsden NHS Foundation TrustInstitute of Cancer ResearchSuttonSurreySM2 5PTUK
| | - Joely Smith
- Brighton and Sussex University Hospitals NHS TrustBrightonBN2 5BEUK
| | - Araminta E. Ledger
- CR‐UK and EPSRC Cancer Imaging CentreRoyal Marsden NHS Foundation TrustInstitute of Cancer ResearchSuttonSurreySM2 5PTUK
| | - Erica Scurr
- CR‐UK and EPSRC Cancer Imaging CentreRoyal Marsden NHS Foundation TrustInstitute of Cancer ResearchSuttonSurreySM2 5PTUK
| | - Steven Allen
- Department of RadiologyRoyal Marsden NHS Foundation TrustChelsea, LondonSW3 6JJUK
| | - Robin M. Wilson
- Department of RadiologyRoyal Marsden NHS Foundation TrustChelsea, LondonSW3 6JJUK
| | - Elizabeth O'Flynn
- CR‐UK and EPSRC Cancer Imaging CentreRoyal Marsden NHS Foundation TrustInstitute of Cancer ResearchSuttonSurreySM2 5PTUK
| | - Romney J.E. Pope
- Department of RadiologyRoyal Marsden NHS Foundation TrustChelsea, LondonSW3 6JJUK
| | - Martin O. Leach
- CR‐UK and EPSRC Cancer Imaging CentreRoyal Marsden NHS Foundation TrustInstitute of Cancer ResearchSuttonSurreySM2 5PTUK
| | - Maria A. Schmidt
- CR‐UK and EPSRC Cancer Imaging CentreRoyal Marsden NHS Foundation TrustInstitute of Cancer ResearchSuttonSurreySM2 5PTUK
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16
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Short tau inversion recovery in breast diffusion-weighted imaging: signal-to-noise ratio and apparent diffusion coefficients using a breast phantom in comparison with spectral attenuated inversion recovery. Radiol Med 2017; 123:296-304. [PMID: 29230679 DOI: 10.1007/s11547-017-0840-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Accepted: 11/30/2017] [Indexed: 12/25/2022]
Abstract
OBJECTIVE This study aimed to compare the signal-to-noise ratios (SNRs) and apparent diffusion coefficients (ADCs) obtained using two fat suppression techniques in breast diffusion-weighted imaging (DWI) of a phantom. MATERIALS AND METHODS The breast phantom comprised agar gels with four different concentrations of granulated sugar (samples 1, 2, 3, and 4). DWI with short tau inversion recovery (STIR-DWI) and that with spectral attenuated inversion recovery (SPAIR-DWI) were performed using 3.0-T magnetic resonance imaging, and the obtained SNRs and ADCs were compared. ADCs were also compared between the right and left breast phantoms. RESULTS For samples 3 and 4, SNRs obtained using STIR-DWI were lower than those obtained using SPAIR-DWI. For samples 2, 3, and 4, overall ADCs obtained using STIR-DWI were significantly higher than those obtained using SPAIR-DWI (p < 0.001 for all), although no significant difference was observed for sample 1 (p = 0.62). STIR-DWI shows a positive bias and wide limits of agreement in Bland-Altman plot. The coefficients of variance of overall ADCs were good in STIR-DWI and SPAIR-DWI. For all samples, STIR-DWI demonstrated slightly larger percentage differences in ADCs between the right and left phantoms than SPAIR-DWI. CONCLUSION SNRs and ADCs obtained using STIR-DWI are influenced by the T 1 value; a shorter T 1 value decreases SNRs, overestimates ADCs, and induces the measurement error in ADCs. STIR-DWI showed a larger difference in ADCs between the right and left phantoms than SPAIR-DWI.
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17
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van der Velden TA, Luijten PR, Klomp DW. Improved fat suppression of the breast using discretized frequency shimming. Magn Reson Med 2017; 79:593-599. [DOI: 10.1002/mrm.26651] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2016] [Revised: 01/24/2017] [Accepted: 01/27/2017] [Indexed: 11/12/2022]
Affiliation(s)
- Tijl A. van der Velden
- Department of Radiology; University Medical Centre Utrecht; 3584CX Utrecht the Netherlands
| | - Peter R. Luijten
- Department of Radiology; University Medical Centre Utrecht; 3584CX Utrecht the Netherlands
| | - Dennis W.J. Klomp
- Department of Radiology; University Medical Centre Utrecht; 3584CX Utrecht the Netherlands
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18
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Hancu I, Lee SK, Hulsey K, Lenkinski R, Holland D, Sperl JI, Tan ET. Distortion correction in diffusion-weighted imaging of the breast: Performance assessment of prospective, retrospective, and combined (prospective + retrospective) approaches. Magn Reson Med 2016; 78:247-253. [PMID: 27403765 DOI: 10.1002/mrm.26328] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2016] [Revised: 05/27/2016] [Accepted: 06/10/2016] [Indexed: 01/11/2023]
Abstract
PURPOSE To compare the effectiveness of prospective, retrospective, and combined (prospective + retrospective) EPI distortion correction methods in bilateral breast diffusion-weighted imaging (DWI) scans. METHODS Five healthy female subjects underwent an axial bilateral breast DWI exam with and without prospective B0 inhomogeneity correction using slice-by-slice linear shimming. In each case, an additional b=0 DWI scan was performed with the polarity of the phase-encoding gradient reversed, to generate an estimated B0 map; this map or a separately acquired B0 map was used for retrospective correction, either alone or in combination with the prospective correction. The alignment between an undistorted, anatomical reference scan with similar contrast and the corrected b=0 DWI images with different correction schemes was assessed. RESULTS The average cross-correlation coefficient between the DWI images and the anatomical reference scan was increased from 0.82 to 0.92 over the five volunteers when combined prospective and retrospective distortion correction was applied. Furthermore, such correction substantially reduced patient-to-patient variation of the image alignment and the variability of the average apparent diffusion coefficient in normal glandular tissue. CONCLUSION Combined prospective and retrospective distortion correction can provide an efficient way to reduce susceptibility-induced image distortions and enhance the reliability of breast DWI exams. Magn Reson Med 78:247-253, 2017. © 2016 International Society for Magnetic Resonance in Medicine.
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Affiliation(s)
| | - Seung-Kyun Lee
- CNIR, IBS and Department of Biomedical Engineering, Sungkyunkwan University, Suwon, South Korea
| | - Keith Hulsey
- University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Robert Lenkinski
- University of Texas Southwestern Medical Center, Dallas, TX, USA
| | | | | | - Ek T Tan
- GE Global Research Center, Niskayuna, NY, USA
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19
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van der Velden TA, Schmitz AMT, Gilhuijs KGA, Veldhuis WB, Luijten PR, Boer VO, Klomp DWJ. Fat suppression techniques for obtaining high resolution dynamic contrast enhanced bilateral breast MR images at 7T. Magn Reson Imaging 2015; 34:462-8. [PMID: 26708033 DOI: 10.1016/j.mri.2015.12.012] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2015] [Accepted: 12/13/2015] [Indexed: 10/22/2022]
Abstract
OBJECTIVES To compare water selective excitation (WSE) and Dixon fat suppression in the context of high-resolution dynamic contrast enhanced MRI of the breast at 7T. METHODS Ten healthy volunteers and one patient with a malignant breast lesion were scanned at 7T. The MRI protocol contained 3D T1-weighted gradient echo images obtained with both WSE fat suppression, multi echo Dixon fat suppression, and without fat suppression. Images were acquired at a (0.8mm)(3) or (0.7mm)(3) isotropic resolution with equal field of view and optimized such to obtain a maximal SNR. Image quality was scored qualitatively on overall image quality, sharpness of anatomical details, presence of artifacts, inhomogeneous fat suppression and the presence of water-fat shift. A quantitative scoring was obtained from the signal to noise ratio and contrast to noise ratio. RESULTS WSE scored significantly better in terms of overall image quality and the absence of artifacts. No significant difference in contrast to noise ratio was found between the two fat suppression methods. CONCLUSION When maximizing temporal and spatial resolution of high resolution DCE MRI of the breast, water selective excitation provides better image quality than multi echo Dixon at 7T.
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Affiliation(s)
- Tijl A van der Velden
- University Medical Center Utrecht, Department of Radiology, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands.
| | - Alexander M Th Schmitz
- University Medical Center Utrecht, Department of Radiology, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands; University Medical Center Utrecht, Image Sciences Institute, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands
| | - Kenneth G A Gilhuijs
- University Medical Center Utrecht, Department of Radiology, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands; University Medical Center Utrecht, Image Sciences Institute, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands
| | - Wouter B Veldhuis
- University Medical Center Utrecht, Department of Radiology, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands
| | - Peter R Luijten
- University Medical Center Utrecht, Department of Radiology, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands
| | - Vincent O Boer
- Danish Research Centre for Magnetic Resonance, Centre for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Hvidovre, Kettegaard Allé 30, DK-2650, Hvidovre, Denmark
| | - Dennis W J Klomp
- University Medical Center Utrecht, Department of Radiology, Heidelberglaan 100, 3584CX, Utrecht, the Netherlands
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20
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Harris CT, Handler WB, Chronik BA. A new approach to shimming: the dynamically controlled adaptive current network. Magn Reson Med 2015; 71:859-69. [PMID: 23505012 DOI: 10.1002/mrm.24724] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
PURPOSE Magnetic field homogeneity is important in all aspects of magnetic resonance imaging. A new approach to increase field homogeneity is presented that allows dynamic and adaptive control over the flow of current over a single surface using a network of actively controlled solid-state switches. METHODS Computer simulations were completed demonstrating the potential of this approach. Wire patterns were produced using the boundary element method to remove magnetic field inhomogeneities over multiple regions of interest. Field maps and regions of interest histograms were compared with and without the shim present. A prototype was constructed confirming the feasibility of this approach within the magnetic resonance environment. Metal-oxide-semiconductor field-effect transistors were used. Two field maps were acquired with the prototype producing gradient and offset field profiles, respectively. The experimental field profiles were compared with simulation. RESULTS The wire patterns significantly increased field homogeneity over all regions of interest investigated. The field profiles produced by the prototype matched simulation. No imaging artifacts were produced. CONCLUSIONS An approach to control the shape of a current distribution over a single surface has been described. This method has the potential to improve field homogeneity over any desired region of interest and is particularly well suited for dynamic applications. The method is feasible with current technology and construction techniques.
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Affiliation(s)
- Chad T Harris
- Department of Physics and Astronomy, Western University, London, Canada
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21
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Impact of fibroglandular tissue and background parenchymal enhancement on diffusion weighted imaging of breast lesions. Eur J Radiol 2015; 83:2137-2143. [PMID: 25445896 DOI: 10.1016/j.ejrad.2014.09.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2014] [Revised: 08/07/2014] [Accepted: 09/11/2014] [Indexed: 12/16/2022]
Abstract
PURPOSE To evaluate the influence of the amount of fibroglandular breast tissue (FGT) and background-parenchymal enhancement (BPE) on lesion detection, quantitative analysis of normal breast tissue and of breast lesions on DWI. MATERIALS AND METHODS IRB approved this retrospective study on focal findings at contrast-enhanced (CE)breast MR and DWI performed during July-December 2011. Patients with cysts, previous irradiation,silicone implants and current chemotherapy were excluded. DWI with fat suppression was acquired before dynamic acquisition (b factors: 0.1000 s/mm2) using 1.5 and 3 T scanners. Using correlation with dynamic and T2 images, ROIs were drawn free-hand within the borders of any visible lesion and incontralateral normal breast. Fisher's exact test to evaluate visibility and Wilcoxon-rank-sum test for comparison of ADC values were used. The amount of FGT and BPE was visually assessed by concurrent MRI. Analysis was stratified by menopausal status. RESULTS 25/127 (20%) lesions were excluded for technical reasons. 65/102 (64%) lesions were visible on DWI (median diameter: 1.85 cm). Mass lesions (M) were more visible (43/60 = 72%) than non-mass enhancement (NME) (22/42 = 52%) and malignant lesions were more visible (55/72 = 76%) than benign(10/30 = 33%). BPE and FGT did not influence visibility of M (p = 0.35 and p = 0.57 respectively) as well as of NME (p = 0.54 and p = 0.10). BPE and FGT did not influence visibility of malignant (p = 0.96 and p = 1.0)and benign lesions (p = 1.0 and p = 0.10). Results were confirmed adjusting for menopausal status. The ADC value of normal breast tissue was not influenced by BPE, while it was lower in predominantly fatty breasts compared to dense ones (p = 0.002). CONCLUSIONS FGT affects the quantitative evaluation of ADC in normal breast tissue whereas BPE does not.Furthermore, both BPE and FGT do not influence visibility of benign or malignant findings, including both mass lesions and non-mass enhancement, on DWI.
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Nissan N, Furman-Haran E, Feinberg-Shapiro M, Grobgeld D, Eyal E, Zehavi T, Degani H. Tracking the mammary architectural features and detecting breast cancer with magnetic resonance diffusion tensor imaging. J Vis Exp 2014:52048. [PMID: 25549209 PMCID: PMC4396944 DOI: 10.3791/52048] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Breast cancer is the most common cause of cancer among women worldwide. Early detection of breast cancer has a critical role in improving the quality of life and survival of breast cancer patients. In this paper a new approach for the detection of breast cancer is described, based on tracking the mammary architectural elements using diffusion tensor imaging (DTI). The paper focuses on the scanning protocols and image processing algorithms and software that were designed to fit the diffusion properties of the mammary fibroglandular tissue and its changes during malignant transformation. The final output yields pixel by pixel vector maps that track the architecture of the entire mammary ductal glandular trees and parametric maps of the diffusion tensor coefficients and anisotropy indices. The efficiency of the method to detect breast cancer was tested by scanning women volunteers including 68 patients with breast cancer confirmed by histopathology findings. Regions with cancer cells exhibited a marked reduction in the diffusion coefficients and in the maximal anisotropy index as compared to the normal breast tissue, providing an intrinsic contrast for delineating the boundaries of malignant growth. Overall, the sensitivity of the DTI parameters to detect breast cancer was found to be high, particularly in dense breasts, and comparable to the current standard breast MRI method that requires injection of a contrast agent. Thus, this method offers a completely non-invasive, safe and sensitive tool for breast cancer detection.
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Affiliation(s)
- Noam Nissan
- Department of Biological Regulation, Weizmann Institute of Science
| | | | | | - Dov Grobgeld
- Department of Biological Regulation, Weizmann Institute of Science
| | - Erez Eyal
- Department of Biological Regulation, Weizmann Institute of Science
| | | | - Hadassa Degani
- Department of Biological Regulation, Weizmann Institute of Science;
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23
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Solomon E, Nissan N, Furman-Haran E, Seginer A, Shapiro-Feinberg M, Degani H, Frydman L. Overcoming limitations in diffusion-weighted MRI of breast by spatio-temporal encoding. Magn Reson Med 2014; 73:2163-73. [PMID: 25045867 DOI: 10.1002/mrm.25344] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2014] [Revised: 05/25/2014] [Accepted: 06/11/2014] [Indexed: 01/20/2023]
Abstract
PURPOSE Evaluating the usefulness of diffusion-weighted spatio-temporal encoding (SPEN) methods to provide quantitative apparent diffusion coefficient (ADC)-based characterizations of healthy and malignant human breast tissues, in comparison with results obtained using techniques based on spin-echo echo planar imaging (SE-EPI). METHODS Twelve healthy volunteers and six breast cancer patients were scanned at 3T using scanner-supplied diffusion-weighted imaging EPI sequences, as well as two fully refocused SPEN variants programmed in-house. Suitable codes were written to process the data, including calculations of the actual b-values and retrieval of the ADC maps. RESULTS Systematically better images were afforded by the SPEN scans, with negligible geometrical distortions and markedly weaker ghosting artifacts arising from either fat tissues or from strongly emitting areas such as cysts. SPEN-derived images provided improved characterizations of the fibroglandular tissues and of the lesions' contours. When translated into the calculation of the ADC maps, there were no significant differences between the mean ADCs derived from SPEN and SE-EPI: if reliable images were available, both techniques showed that ADCs decreased by nearly two-fold in the malignant lesion areas. CONCLUSION SPEN-based sequences yielded diffusion-weighted breast images with minimal artifacts and distortions, enabling the calculation of improved ADC maps and the identification of decreased ADCs in malignant regions.
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Affiliation(s)
- Eddy Solomon
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot, Israel
| | - Noam Nissan
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot, Israel.,Department of Biological Regulation, Weizmann Institute of Science, Rehovot, Israel
| | - Edna Furman-Haran
- Unit of Biological Services, Weizmann Institute of Science, Rehovot, Israel
| | - Amir Seginer
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot, Israel
| | | | - Hadassa Degani
- Department of Biological Regulation, Weizmann Institute of Science, Rehovot, Israel
| | - Lucio Frydman
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot, Israel
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24
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Boer VO, Luttje MP, Luijten PR, Klomp DWJ. Requirements for static and dynamic higher order B0 shimming of the human breast at 7 T. NMR IN BIOMEDICINE 2014; 27:625-631. [PMID: 24615920 DOI: 10.1002/nbm.3096] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2013] [Revised: 01/09/2014] [Accepted: 01/23/2014] [Indexed: 06/03/2023]
Abstract
The increased magnetic susceptibility effects at higher magnetic fields increase the demands for shimming of the B0 field for in vivo MRI and MRS. Both static and dynamic techniques have been developed to compensate for susceptibility-induced field inhomogeneities. In this study, we investigate the impact of and need for both static and dynamic higher order B0 shimming of magnetic field homogeneities in clinical breast MRI at 7 T. Both global and local field variations at lipid-tissue interfaces were observed in the magnetic field using TE-optimized B0 mapping at 7 T. With static B0 shimming, a field homogeneity of 39 ± 11 Hz (n = 48) was reached in a single breast using second-order shimming. Further compensation of the residual local field inhomogeneities caused by lipid-tissue interfaces does not seem to be feasible with shallow spherical harmonic fields. For bilateral shimming, the shimming quality was significantly less at 62 ± 15 Hz (n = 22) over both breasts, even after (simulated) fourth-order shimming. In addition, a substantial time-dependent field instability of 30 Hz peak to peak, with significant higher order field contributions, was observed during regular breathing. In conclusion, TE-optimized B0 field mapping reveals substantial field variations in the lipid-rich environment of the human breast, in both space and time. The static field variations could be partially minimized by third-order B0 shimming, providing sufficient lipid suppression. However, in order to fully benefit from the increased spectral dispersion at high fields, the significant magnetic field variations during breathing need to be considered.
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Affiliation(s)
- Vincent O Boer
- Department of Radiology, University Medical Center Utrecht, the Netherlands
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Bokacheva L, Kaplan JB, Giri DD, Patil S, Gnanasigamani M, Nyman CG, Deasy JO, Morris EA, Thakur SB. Intravoxel incoherent motion diffusion-weighted MRI at 3.0 T differentiates malignant breast lesions from benign lesions and breast parenchyma. J Magn Reson Imaging 2013; 40:813-23. [PMID: 24273096 DOI: 10.1002/jmri.24462] [Citation(s) in RCA: 89] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2013] [Accepted: 09/03/2013] [Indexed: 12/20/2022] Open
Abstract
PURPOSE To study the differentiation of malignant breast lesions from benign lesions and fibroglandular tissue (FGT) using apparent diffusion coefficient (ADC) and intravoxel incoherent motion (IVIM) parameters. MATERIALS AND METHODS This retrospective study included 26 malignant and 14 benign breast lesions in 35 patients who underwent diffusion-weighted MRI at 3.0T and nine b-values (0-1000 s/mm(2) ). ADC and IVIM parameters (perfusion fraction fp , pseudodiffusion coefficient Dp , and true diffusion coefficient Dd ) were determined in lesions and FGT. For comparison, IVIM was also measured in 16 high-risk normal patients. A predictive model was constructed using linear discriminant analysis. Lesion discrimination based on ADC and IVIM parameters was assessed using receiver operating characteristic (ROC) and area under the ROC curve (AUC). RESULTS In FGT of normal subjects, fp was 1.1 ± 1.1%. In malignant lesions, fp (6.4 ± 3.1%) was significantly higher than in benign lesions (3.1 ± 3.3%, P = 0.0025) or FGT (1.5 ± 1.2%, P < 0.001), and Dd ((1.29 ± 0.28) × 10(-3) mm(2) /s) was lower than in benign lesions ((1.56 ± 0.28) × 10(-3) mm(2) /s, P = 0.011) or FGT ((1.86 ± 0.34) × 10(-3) mm(2) /s, P < 0.001). A combination of Dd and fp provided higher AUC for discrimination between malignant and benign lesions (0.84) or FGT (0.97) than ADC (0.72 and 0.86, respectively). CONCLUSION The IVIM parameters provide accurate identification of malignant lesions.
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Affiliation(s)
- Louisa Bokacheva
- Department of Medical Physics, Memorial Sloan-Kettering Cancer Center, New York, NY, USA
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Klomp DWJ, Dula AN, Arlinghaus LR, Italiaander M, Dortch RD, Zu Z, Williams JM, Gochberg DF, Luijten PR, Gore JC, Yankeelov TE, Smith SA. Amide proton transfer imaging of the human breast at 7T: development and reproducibility. NMR IN BIOMEDICINE 2013; 26:1271-7. [PMID: 23559550 PMCID: PMC3726578 DOI: 10.1002/nbm.2947] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2012] [Revised: 02/07/2013] [Accepted: 02/19/2013] [Indexed: 05/03/2023]
Abstract
Chemical exchange saturation transfer (CEST) can offer information about protons associated with mobile proteins through the amide proton transfer (APT) effect, which has been shown to discriminate tumor from healthy tissue and, more recently, has been suggested as a prognosticator of response to therapy. Despite this promise, APT effects are small (only a few percent of the total signal), and APT imaging is often prone to artifacts resulting from system instability. Here we present a procedure that enables the detection of APT effects in the human breast at 7T while mitigating these issues. Adequate signal-to-noise ratio (SNR) was achieved via an optimized quadrature RF breast coil and 3D acquisitions. To reduce the influence of fat, effective fat suppression schemes were developed that did not degrade SNR. To reduce the levels of ghosting artifacts, dummy scans have been integrated into the scanning protocol. Compared with results obtained at 3T, the standard deviation of the measured APT effect was reduced by a factor of four at 7T, allowing for the detection of APT effects with a standard deviation of 1% in the human breast at 7T. Together, these results demonstrate that the APT effect can be reliably detected in the healthy human breast with a high level of precision at 7T.
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Affiliation(s)
- Dennis W. J. Klomp
- Department of Radiology, University Medical Center Utrecht, Utrecht, the Netherlands
- Institute of Imaging Science, Vanderbilt, Nashville, USA
| | - Adrienne N. Dula
- Institute of Imaging Science, Vanderbilt, Nashville, USA
- Department of Radiology and Radiological Sciences, Vanderbilt, Nashville, USA
| | | | - Michel Italiaander
- Department of Radiology, University Medical Center Utrecht, Utrecht, the Netherlands
| | - Richard D. Dortch
- Institute of Imaging Science, Vanderbilt, Nashville, USA
- Department of Radiology and Radiological Sciences, Vanderbilt, Nashville, USA
| | - Zhongliang Zu
- Institute of Imaging Science, Vanderbilt, Nashville, USA
| | - Jason M. Williams
- Institute of Imaging Science, Vanderbilt, Nashville, USA
- Department of Radiology and Radiological Sciences, Vanderbilt, Nashville, USA
| | | | - Peter R. Luijten
- Department of Radiology, University Medical Center Utrecht, Utrecht, the Netherlands
| | - John C. Gore
- Institute of Imaging Science, Vanderbilt, Nashville, USA
- Department of Radiology and Radiological Sciences, Vanderbilt, Nashville, USA
- Department of Biomedical Engineering, Vanderbilt, Nashville, USA
- Department of Molecular Physiology and Biophysics, Vanderbilt, Nashville, USA
- Department of Physics, Vanderbilt, Nashville, USA
| | - Thomas E. Yankeelov
- Institute of Imaging Science, Vanderbilt, Nashville, USA
- Department of Radiology and Radiological Sciences, Vanderbilt, Nashville, USA
- Department of Biomedical Engineering, Vanderbilt, Nashville, USA
- Department of Physics, Vanderbilt, Nashville, USA
- Department of Cancer Biology, Vanderbilt, Nashville, USA
| | - Seth A. Smith
- Institute of Imaging Science, Vanderbilt, Nashville, USA
- Department of Radiology and Radiological Sciences, Vanderbilt, Nashville, USA
- Department of Biomedical Engineering, Vanderbilt, Nashville, USA
- Department of Physics, Vanderbilt, Nashville, USA
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Lee SK, Tan ET, Govenkar A, Hancu I. Dynamic slice-dependent shim and center frequency update in 3 T breast diffusion weighted imaging. Magn Reson Med 2013; 71:1813-8. [PMID: 23798360 DOI: 10.1002/mrm.24824] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2013] [Revised: 04/26/2013] [Accepted: 04/30/2013] [Indexed: 11/07/2022]
Abstract
PURPOSE To demonstrate dynamic slice-dependent shim update as a simple method to reduce susceptibility-induced B0 inhomogeneity and associated pixel shift artifacts in diffusion-weighted echo planar imaging (DW-EPI) in 3 T breast imaging. METHODS Dynamic slice-dependent update of linear shim and center frequency was implemented in a dual-echo B0 mapping sequence and a DW-EPI sequence. Multi-slice axial B0 maps and diffusion-weighted images were obtained from four volunteers with both conventional and dynamic shim methods. The two shim methods were compared in terms of B0 homogeneity and EPI pixel shift artifacts. RESULTS In all volunteers the B0 maps showed significantly improved homogeneity; the left-right asymmetry was reduced by 79% and within-slice B0 standard deviation was reduced by 20% on the average. The improvements were better than what was previously reported for conventional (static) third-order shim in bilateral breast. Anatomy-referenced apparent diffusion coefficient (ADC) maps showed reduced overall image registration error obtainable with dynamic shim. CONCLUSIONS Dynamic shim is an effective method to improve B0 shimming and DW-EPI image quality in 3 T bilateral breast imaging. Magn Reson Med 71:1813-1818, 2014. © 2013 Wiley Periodicals, Inc.
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