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Scholten H, Wech T, Köhler S, Smart SS, Boyle JH, Teh I, Köstler H, Schneider JE. On the correction of spiral trajectories on a preclinical MRI scanner with a high-performance gradient insert. NMR IN BIOMEDICINE 2024:e5249. [PMID: 39267310 DOI: 10.1002/nbm.5249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2024] [Revised: 07/29/2024] [Accepted: 08/11/2024] [Indexed: 09/17/2024]
Abstract
This study aimed to examine different trajectory correction methods for spiral imaging on a preclinical scanner with high-performance gradients with respect to image quality in a phantom and in vivo. The gold standard method of measuring the trajectories in a separate experiment is compared to an isotropic delay-correction, a correction using the gradient system transfer function (GSTF), and a combination of the two. Three different spiral trajectories, with 96, 16, and three interleaves, are considered. The best image quality is consistently achieved when determining the trajectory in a separate phantom measurement. However, especially for the spiral with 96 interleaves, the other correction methods lead to almost comparable results. Remaining imperfections in the corrected gradient waveforms and trajectories are attributed to asymmetrically occurring undulations in the actual, generated gradients, suggesting that the underlying assumption of linearity is violated. In conclusion, images of sufficient quality can be acquired on preclinical small-animal scanners using spiral k-space trajectories without the need to carry out separate trajectory measurements each time. Depending on the trajectory, a simple isotropic delay-correction or a GSTF-based correction can provide images of similar quality.
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Affiliation(s)
- Hannah Scholten
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - Tobias Wech
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
- Comprehensive Heart Failure Center, University Hospital Würzburg, Würzburg, Germany
| | | | - Sean S Smart
- Nuffield Department of Clinical Neuroscience, University of Oxford, Oxford, UK
| | - Jordan H Boyle
- Faculty of Industrial Design Engineering, Delft University of Technology, Delft, The Netherlands
| | - Irvin Teh
- Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK
| | - Herbert Köstler
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - Jürgen E Schneider
- Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK
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Lim Y, Kumar P, Nayak KS. Speech production real-time MRI at 0.55 T. Magn Reson Med 2024; 91:337-343. [PMID: 37799039 DOI: 10.1002/mrm.29843] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 07/11/2023] [Accepted: 08/10/2023] [Indexed: 10/07/2023]
Abstract
PURPOSE To demonstrate speech-production real-time MRI (RT-MRI) using a contemporary 0.55T system, and to identify opportunities for improved performance compared with conventional field strengths. METHODS Experiments were performed on healthy adult volunteers using a 0.55T MRI system with high-performance gradients and a custom 8-channel upper airway coil. Imaging was performed using spiral-based balanced SSFP and gradient-recalled echo (GRE) pulse sequences using a temporal finite-difference constrained reconstruction. Speech-production RT-MRI was performed with three spiral readout durations (8.90, 5.58, and 3.48 ms) to determine trade-offs with respect to articulator contrast, blurring, banding artifacts, and overall image quality. RESULTS Both spiral GRE and bSSFP captured tongue boundary dynamics during rapid consonant-vowel syllables. Although bSSFP provided substantially higher SNR in all vocal tract articulators than GRE, it suffered from banding artifacts at TR > 10.9 ms. Spiral bSSFP with the shortest readout duration (3.48 ms, TR = 5.30 ms) had the best image quality, with a 1.54-times boost in SNR compared with an equivalent GRE sequence. Longer readout durations led to increased SNR efficiency and blurring in both bSSFP and GRE. CONCLUSION High-performance 0.55T MRI systems can be used for speech-production RT-MRI. Spiral bSSFP can be used without suffering from banding artifacts in vocal tract articulators, provide better SNR efficiency, and have better image quality than what is typically achieved at 1.5 T or 3 T.
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Affiliation(s)
- Yongwan Lim
- Ming Hsieh Department of Electrical and Computer Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, California, USA
| | - Prakash Kumar
- Ming Hsieh Department of Electrical and Computer Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, California, USA
| | - Krishna S Nayak
- Ming Hsieh Department of Electrical and Computer Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, California, USA
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Kraus F, Wech T, Köstler H, Hagen R, Scherzad A. Do Disinfectant Solutions during Gargling Reach the Pharynx? Folia Phoniatr Logop 2023; 76:102-108. [PMID: 37544306 DOI: 10.1159/000533135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Accepted: 07/05/2023] [Indexed: 08/08/2023] Open
Abstract
INTRODUCTION In times of COVID-19, gargling disinfectant is commonly used. Disinfectant solutions seem to decrease the infection's symptoms. For disinfection, several techniques are reported. So far, there are no data about the regions in the upper airways achieved by gargled fluid. METHODS Ten healthy volunteers without any dysphagia were investigated with a high-sensitivity flexible endoscopic evaluation of swallowing (hsFEES®) during and after gargling colored water. One volunteer repeated the gargling process in fast and real-time MRI. RESULTS In all cases, no color accumulation was detected on the posterior pharyngeal wall, epi- or hypopharynx during gargling. The MRI scans confirmed the results. CONCLUSIONS hsFEES® and fast MRI provide an insight into the gargling pattern. Data show that during gargling, the fluid covers the soft tissue in the oral cavity and the anterior part of the soft palate, but not the posterior pharyngeal wall nor the epi- and hypopharynx.
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Affiliation(s)
- Fabian Kraus
- Department of Oto-Rhino-Laryngology, Plastic, Aesthetic and Reconstructive Head and Neck Surgery, University of Würzburg, Würzburg, Germany
| | - Tobias Wech
- Department of Diagnostic and Interventional Radiology, University of Würzburg, Würzburg, Germany
| | - Herbert Köstler
- Department of Diagnostic and Interventional Radiology, University of Würzburg, Würzburg, Germany
| | - Rudolf Hagen
- Department of Oto-Rhino-Laryngology, Plastic, Aesthetic and Reconstructive Head and Neck Surgery, University of Würzburg, Würzburg, Germany
| | - Agmal Scherzad
- Department of Oto-Rhino-Laryngology, Plastic, Aesthetic and Reconstructive Head and Neck Surgery, University of Würzburg, Würzburg, Germany
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Scholten H, Lohr D, Wech T, Köstler H. Fast measurement of the gradient system transfer function at 7 T. Magn Reson Med 2023; 89:1644-1659. [PMID: 36468622 DOI: 10.1002/mrm.29523] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Revised: 10/21/2022] [Accepted: 10/23/2022] [Indexed: 12/12/2022]
Abstract
PURPOSE In this work, a new method to determine the gradient system transfer function (GSTF) with high frequency resolution and high SNR is presented, using fast and simple phantom measurements. The GSTF is an effective instrument for hardware characterization and calibration, which can be used to correct for gradient distortions, or enhance gradient fidelity. METHODS The thin-slice approach for phantom-based measurements of the GSTF is expanded by adding excitations that are shifted after the application of the probing gradient, to capture long-lasting field fluctuations with high SNR. A physics-informed regularization procedure is implemented to derive high-quality transfer functions from a small number of measurements. The resulting GSTFs are evaluated by means of gradient time-course estimation and pre-emphasis of a trapezoidal test gradient on a 7T scanner. RESULTS The GSTFs determined with the proposed method capture sharp mechanical resonances with a high level of detail. The measured trapezoidal gradient progressions are authentically reproduced by the GSTF estimations on all three axes. The GSTF-based pre-emphasis considerably improves the gradient fidelity in the plateau phase of the test gradient and almost completely eliminates lingering field oscillations. CONCLUSION The presented approach allows fast and simple characterization of gradient field fluctuations caused by long-living eddy current and vibration effects, which become more pronounced at ultrahigh field strengths.
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Affiliation(s)
- Hannah Scholten
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - David Lohr
- Chair of Molecular and Cellular Imaging, Comprehensive Heart Failure Center (CHFC), University Hospital Würzburg, Würzburg, Germany
| | - Tobias Wech
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - Herbert Köstler
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
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Gilbert KM, Dubovan PI, Gati JS, Menon RS, Baron CA. Integration of an RF coil and commercial field camera for ultrahigh-field MRI. Magn Reson Med 2021; 87:2551-2565. [PMID: 34932225 DOI: 10.1002/mrm.29130] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 11/16/2021] [Accepted: 12/03/2021] [Indexed: 11/08/2022]
Abstract
PURPOSE To develop an RF coil with an integrated commercial field camera for ultrahigh field (7T) neuroimaging. The RF coil would operate within a head-only gradient coil and be subject to the corresponding design constraints. The RF coil can thereafter be used for subject-specific correction of k-space trajectories-notably in gradient-sensitive sequences such as single-shot spiral imaging. METHODS The transmit and receive performance was evaluated before and after the integration of field probes, whereas field probes were evaluated when in an optimal configuration external to the coil and after their integration. Diffusion-weighted EPI and single-shot spiral acquisitions were employed to evaluate the efficacy of correcting higher order field perturbations and the consequent effect on image quality. RESULTS Field probes had a negligible effect on RF-coil performance, including the transmit efficiency, transmit uniformity, and mean SNR over the brain. Modest reductions in field-probe signal lifetimes were observed, caused primarily by nonidealities in the gradient and shim fields of the head-only gradient coil at the probe positions. The field-monitoring system could correct up to second-order field perturbations in single-shot spiral imaging. CONCLUSION The integrated RF coil and field camera was capable of concurrent-field monitoring within a 7T head-only scanner and facilitated the subsequent correction of k-space trajectories during spiral imaging.
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Affiliation(s)
- Kyle M Gilbert
- Centre for Functional and Metabolic Mapping, The University of Western Ontario, London, Ontario, Canada.,Department of Medical Biophysics, The University of Western Ontario, London, Ontario, Canada
| | - Paul I Dubovan
- Centre for Functional and Metabolic Mapping, The University of Western Ontario, London, Ontario, Canada.,Department of Medical Biophysics, The University of Western Ontario, London, Ontario, Canada
| | - Joseph S Gati
- Centre for Functional and Metabolic Mapping, The University of Western Ontario, London, Ontario, Canada.,Department of Medical Biophysics, The University of Western Ontario, London, Ontario, Canada
| | - Ravi S Menon
- Centre for Functional and Metabolic Mapping, The University of Western Ontario, London, Ontario, Canada.,Department of Medical Biophysics, The University of Western Ontario, London, Ontario, Canada
| | - Corey A Baron
- Centre for Functional and Metabolic Mapping, The University of Western Ontario, London, Ontario, Canada.,Department of Medical Biophysics, The University of Western Ontario, London, Ontario, Canada
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Nussbaum J, Dietrich BE, Wilm BJ, Pruessmann KP. Thermal variation in gradient response: measurement and modeling. Magn Reson Med 2021; 87:2224-2238. [PMID: 34932233 PMCID: PMC9303907 DOI: 10.1002/mrm.29123] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 11/02/2021] [Accepted: 11/29/2021] [Indexed: 12/14/2022]
Abstract
PURPOSE Many aspects and imperfections of gradient dynamics in MRI have been successfully captured by linear time-invariant (LTI) models. Changes in gradient behavior due to heating, however, violate time invariance. The goal of this work is to study such changes at the level of transfer functions and model them by thermal extension of the LTI framework. METHODS To study the impact of gradient heating on transfer functions, a clinical MR system was heated using a range of high-amplitude DC and AC waveforms, each followed by measuring transfer functions in rapid succession while the system cooled down. Simultaneously, gradient temperature was monitored with an array of temperature sensors positioned according to initial infrared recordings of the gradient tube. The relation between temperatures and transfer functions is cast into local and global linear models. The models are analysed in terms of self-consistency, conditioning, and prediction performance. RESULTS Pronounced thermal effects are observed in the time resolved transfer functions, largely attributable to in-coil eddy currents and mechanical resonances. Thermal modeling is found to capture these effects well. The keys to good model performance are well-placed temperature sensors and suitable training data. CONCLUSION Heating changes gradient response, violating time invariance. The utility of LTI modeling can nevertheless be recovered by a linear thermal extension, relying on temperature sensing and adequate one-time training.
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Affiliation(s)
- Jennifer Nussbaum
- Institute for Biomedical Engineering, ETH Zurich and University of Zurich, Zurich, Switzerland
| | - Benjamin E Dietrich
- Institute for Biomedical Engineering, ETH Zurich and University of Zurich, Zurich, Switzerland
| | - Bertram J Wilm
- Institute for Biomedical Engineering, ETH Zurich and University of Zurich, Zurich, Switzerland
| | - Klaas P Pruessmann
- Institute for Biomedical Engineering, ETH Zurich and University of Zurich, Zurich, Switzerland
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Advances in spiral fMRI: A high-resolution study with single-shot acquisition. Neuroimage 2021; 246:118738. [PMID: 34800666 DOI: 10.1016/j.neuroimage.2021.118738] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2020] [Revised: 10/23/2021] [Accepted: 11/15/2021] [Indexed: 01/15/2023] Open
Abstract
Spiral fMRI has been put forward as a viable alternative to rectilinear echo-planar imaging, in particular due to its enhanced average k-space speed and thus high acquisition efficiency. This renders spirals attractive for contemporary fMRI applications that require high spatiotemporal resolution, such as laminar or columnar fMRI. However, in practice, spiral fMRI is typically hampered by its reduced robustness and ensuing blurring artifacts, which arise from imperfections in both static and dynamic magnetic fields. Recently, these limitations have been overcome by the concerted application of an expanded signal model that accounts for such field imperfections, and its inversion by iterative image reconstruction. In the challenging ultra-high field environment of 7 Tesla, where field inhomogeneity effects are aggravated, both multi-shot and single-shot 2D spiral imaging at sub-millimeter resolution was demonstrated with high depiction quality and anatomical congruency. In this work, we further these advances towards a time series application of spiral readouts, namely, single-shot spiral BOLD fMRI at 0.8 mm in-plane resolution. We demonstrate that high-resolution spiral fMRI at 7 T is not only feasible, but delivers both excellent image quality, BOLD sensitivity, and spatial specificity of the activation maps, with little artifactual blurring. Furthermore, we show the versatility of the approach with a combined in/out spiral readout at a more typical resolution (1.5 mm), where the high acquisition efficiency allows to acquire two images per shot for improved sensitivity by echo combination.
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Eirich P, Wech T, Heidenreich JF, Stich M, Petri N, Nordbeck P, Bley TA, Köstler H. Cardiac real-time MRI using a pre-emphasized spiral acquisition based on the gradient system transfer function. Magn Reson Med 2020; 85:2747-2760. [PMID: 33270942 DOI: 10.1002/mrm.28621] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Revised: 10/21/2020] [Accepted: 11/10/2020] [Indexed: 12/28/2022]
Abstract
PURPOSE Segmented Cartesian acquisition in breath hold represents the current gold standard for cardiac functional MRI. However, it is also associated with long imaging times and severe restrictions in arrhythmic or dyspneic patients. Therefore, we introduce a real-time imaging technique based on a spoiled gradient-echo sequence with undersampled spiral k-space trajectories corrected by a gradient pre-emphasis. METHODS A fully automatic gradient waveform pre-emphasis based on the gradient system transfer function was implemented to compensate for gradient inaccuracies, to optimize fast double-oblique spiral MRI. The framework was tested in a phantom study and subsequently transferred to compressed sensing-accelerated cardiac functional MRI in real time. Spiral acquisitions during breath hold and free breathing were compared with this reference method for healthy subjects (N = 7) as well as patients (N = 2) diagnosed with heart failure and arrhythmia. Left-ventricular volumes and ejection fractions were determined and analyzed using a Wilcoxon signed-rank test. RESULTS The pre-emphasis successfully reduced typical artifacts caused by k-space misregistrations. Dynamic cardiac imaging was possible in real time (temporal resolution < 50 ms) with high spatial resolution (1.34 × 1.34 mm2 ), resulting in a total scan time of less than 50 seconds for whole heart coverage. Comparable image quality, as well as similar left-ventricular volumes and ejection fractions, were observed for the accelerated and the reference method. CONCLUSION The proposed technique enables high-resolution real-time cardiac MRI with no need for breath holds and electrocardiogram gating, shortening the duration of an entire functional cardiac exam to less than 1 minute.
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Affiliation(s)
- Philipp Eirich
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany.,Comprehensive Heart Failure Center Würzburg, Würzburg, Germany
| | - Tobias Wech
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - Julius F Heidenreich
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - Manuel Stich
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - Nils Petri
- Department of Internal Medicine I, University Hospital Würzburg, Würzburg, Germany
| | - Peter Nordbeck
- Department of Internal Medicine I, University Hospital Würzburg, Würzburg, Germany
| | - Thorsten A Bley
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
| | - Herbert Köstler
- Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Würzburg, Germany
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Bruijnen T, Stemkens B, van den Berg CAT, Tijssen RHN. Prospective GIRF-based RF phase cycling to reduce eddy current-induced steady-state disruption in bSSFP imaging. Magn Reson Med 2019; 84:115-127. [PMID: 31755580 PMCID: PMC7154723 DOI: 10.1002/mrm.28097] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Revised: 11/04/2019] [Accepted: 11/04/2019] [Indexed: 11/07/2022]
Abstract
Purpose To propose an explicit Balanced steady‐state free precession (bSSFP) signal model that predicts eddy current‐induced steady‐state disruptions and to provide a prospective, practical, and general eddy current compensation method. Theory and Methods Gradient impulse response functions (GIRF) were used to simulate trajectory‐specific eddy current‐induced phase errors at the end of a repetition block. These phase errors were included in bloch simulations to establish a bSSFP signal model to predict steady‐state disruptions and their corresponding image artifacts. The signal model was embedded in the MR system and used to compensate the phase errors by prospectively modifying the phase cycling scheme of the RF pulse. The signal model and eddy current compensation method were validated in phantom and in vivo experiments. In addition, the signal model was used to analyze pre‐existing eddy current mitigation methods, such as 2D tiny golden angle radial and 3D paired phase encoded Cartesian acquisitions. Results The signal model predicted eddy current‐induced image artifacts, with the zeroth‐order GIRF being the primary factor to predict the steady‐state disruption. Prospective RF phase cycling schemes were automatically computed online and considerably reduced eddy current‐induced image artifacts. The signal model provides a direct relationship for the smoothness of k‐space trajectories, which explains the effectiveness of phase encode pairing and tiny golden angle trajectory. Conclusions The proposed signal model can accurately predict eddy current‐induced steady‐state disruptions for bSSFP imaging. The signal model can be used to derive the eddy current‐induced phase errors required for trajectory‐specific RF phase cycling schemes, which considerably reduce eddy current‐induced image artifacts.
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Affiliation(s)
- Tom Bruijnen
- Department of RadiotherapyUniversity Medical Center UtrechtUtrechtThe Netherlands
- Computational Imaging Group for MRI diagnostics and therapy, Centre for Image SciencesUniversity Medical Center UtrechtUtrechtThe Netherlands
| | - Bjorn Stemkens
- Department of RadiotherapyUniversity Medical Center UtrechtUtrechtThe Netherlands
- Computational Imaging Group for MRI diagnostics and therapy, Centre for Image SciencesUniversity Medical Center UtrechtUtrechtThe Netherlands
| | - Cornelis Antonius Theodorus van den Berg
- Department of RadiotherapyUniversity Medical Center UtrechtUtrechtThe Netherlands
- Computational Imaging Group for MRI diagnostics and therapy, Centre for Image SciencesUniversity Medical Center UtrechtUtrechtThe Netherlands
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