1
|
Tang M, Liu Y, Zhang H, Sun L, Lü P, Chen K. Comprehensive transcriptome sequencing of silkworm Midguts: Uncovering extensive isoform diversity and alternative splicing in BmNPV-Sensitive and BmNPV-resistant strains. J Invertebr Pathol 2024; 204:108104. [PMID: 38608751 DOI: 10.1016/j.jip.2024.108104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Revised: 03/06/2024] [Accepted: 04/09/2024] [Indexed: 04/14/2024]
Abstract
The silkworm, Bombyx mori, stands out as one of the few economically valuable insects within the realm of model organisms. However, Bombyx mori nucleopolyhedrovirus (BmNPV) poses a significant threat, decreasing the quality and quantity of silkworm cocoons. Over the past few decades, a multitude of researchers has delved into the mechanisms that underlie silkworm resistance to BmNPV, employing diverse methodologies and approaching the problem from various angles. Despite this extensive research, the role of alternative splicing (AS) in the silkworm's response to BmNPV infection has been largely unexplored. This study leveraged both third-generation (Oxford Nanopore Technologies) and second-generation (Illumina) high-throughput sequencing technologies to meticulously identify and analyze AS patterns in the context of BmNPV response, utilizing two distinct silkworm strains-the susceptible strain 306 and the resistant strain NB. Consequently, we identified five crucial genes (Dsclp, LOC692903, LOC101743583, LOC101742498, LOC101743809) that are linked to the response to BmNPV infection through AS and differential expression. Additionally, a thorough comparative analysis was conducted on their diverse transcriptomic expression profiles, including alternative polyadenylation, simple sequence repeats, and transcription factors.
Collapse
Affiliation(s)
- Min Tang
- School of Life Sciences, Jiangsu University, Zhenjiang 212013, Jiangsu Province, China
| | - Yi Liu
- School of Life Sciences, Jiangsu University, Zhenjiang 212013, Jiangsu Province, China
| | - Hantao Zhang
- School of Life Sciences, Jiangsu University, Zhenjiang 212013, Jiangsu Province, China
| | - Lindan Sun
- School of Life Sciences, Jiangsu University, Zhenjiang 212013, Jiangsu Province, China
| | - Peng Lü
- School of Life Sciences, Jiangsu University, Zhenjiang 212013, Jiangsu Province, China
| | - Keping Chen
- School of Life Sciences, Jiangsu University, Zhenjiang 212013, Jiangsu Province, China.
| |
Collapse
|
2
|
Yang WY, Liu ZY, Zhu Y, Xiao Y, Xiao WF, Tang L, Dong ZQ, Pan MH, Lu C, Chen P. MicroRNA bmo-miR-31-5p inhibits apoptosis and promotes BmNPV proliferation by targeting the CYP9e2 gene of Bombyx mori. PEST MANAGEMENT SCIENCE 2024. [PMID: 38742692 DOI: 10.1002/ps.8162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Revised: 03/24/2024] [Accepted: 04/28/2024] [Indexed: 05/16/2024]
Abstract
BACKGROUND Bombyx mori nuclear polyhedrosis virus (BmNPV), as a typical baculovirus, is the primary pathogen that infects the silkworm B. mori, a lepidopteran species. Owing to the high biological safety of BmNPV in infecting insects, it is commonly utilized as a biological insecticide for pest control. Apoptosis is important in the interaction between the host and pathogenic microorganisms. MicroRNAs (miRNAs) influence immune responses and promote stability of the immune system via apoptosis. Therefore, the study of apoptosis-related miRNA in silkworms during virus infection can not only provide support for standardizing the prevention and control of diseases and insect pests, but also reduce the economic losses to sericulture caused by the misuse of biological pesticides. RESULTS Through transcriptome sequencing, we identified a miRNA, miR-31-5p, and demonstrated that it can inhibit apoptosis in silkworm cells and promote the proliferation of BmNPV in BmE-SWU1 cells. We identified a target gene of miR-31-5p, B. mori cytochrome P450 9e2 (BmCYP9e2), and demonstrated that it can promote apoptosis in silkworm cells and inhibit the proliferation of BmNPV. Moreover, we constructed transgenic silkworm strains with miR-31-5p knockout and confirmed that they can inhibit the proliferation of BmNPV. CONCLUSION These data indicate that miR-31-5p may exert functions of inhibiting apoptosis and promoting virus proliferation by regulating BmCYP9e2. The findings demonstrate how miRNAs influence host cell apoptosis and how they are involved in the host immune system response to viruses, providing important insights into the applications of biological insecticides for pest control. © 2024 Society of Chemical Industry.
Collapse
Affiliation(s)
- Wen-Yu Yang
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| | - Zhen-Ye Liu
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| | - Yan Zhu
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| | - Yu Xiao
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| | - Wen-Fu Xiao
- Sericultural Research Institute Sichuan Academy of Agricultural Sciences, Nanchong, China
| | - Liang Tang
- Sericulture Technology Promotion Station of Guangxi, Nanning, China
| | - Zhan-Qi Dong
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| | - Min-Hui Pan
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| | - Cheng Lu
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| | - Peng Chen
- State Key Laboratory of Resource Insects, Key Laboratory of Sericultural Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, Southwest University, Beibei, China
| |
Collapse
|
3
|
Zhou L, Ding X, Wang Z, Zhou S, Qin S, Sun X, Wang X, Li M. BmRRS1 Protein Inhibits the Proliferation of Baculovirus Autographa californica Nucleopolyhedrovirus in Silkworm, Bombyx mori. Int J Mol Sci 2023; 25:306. [PMID: 38203476 PMCID: PMC10779178 DOI: 10.3390/ijms25010306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 12/18/2023] [Accepted: 12/21/2023] [Indexed: 01/12/2024] Open
Abstract
The study of functional genes involved in baculovirus infection is vital for its wide application in pest biocontrol. This study utilized the Autographa californica nucleopolyhedrovirus (AcMNPV) and silkworm as models to elucidate the role of BmRRS1, which has been found to exhibit notable differential expression between resistant and susceptible silkworm strains. The results showed that it was evolutionarily conserved in selected species. Among different tissues, it was expressed at the highest level in the gonads, followed by the hemolymph and silk glands; among the different developmental stages, it was the highest in the second instar, followed by the pupae and adults. Moreover, its vital role in suppressing AcMNPV infection was verified by the decreased expression of lef3 and vp39 protein after overexpression of BmRRS1 as well as by the increased expression of the viral gene lef3 and the viral protein vp39 after siRNA treatment against BmRRS1 expression in BmN cells. Additionally, the direct interaction between BmRRS1 and AcMNPV was detected by the GST pull-down assay. Finally, the homologue of BmRRS1 in Spodoptera frugiperda was found to be involved in larval resistance to AcMNPV. In a word, BmRRS1 plays a vital role in AcMNPV resistance in silkworms, and this might be related to the direct interaction with AcMNPV. The results of this study provide a potential target for protecting silkworm larvae from virus infection and controlling agricultural and forestry pests.
Collapse
Affiliation(s)
- Liqin Zhou
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
| | - Xinyi Ding
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
| | - Zhisheng Wang
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
| | - Si Zhou
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
| | - Sheng Qin
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Xia Sun
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Xueyang Wang
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Muwang Li
- Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (L.Z.); (X.D.); (Z.W.); (S.Z.); (S.Q.); (X.S.); (X.W.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| |
Collapse
|
4
|
Zhang J, Zafar J, Kong J, Wang F, Shao X, Zhang R, Pang R, Xu H, Xu X, Jin F. MicroRNA-Mediated Host Immune Genes Manipulation Benefits AcMNPV Proliferation in Spodoptera frugiperda. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71. [PMID: 37917564 PMCID: PMC10655178 DOI: 10.1021/acs.jafc.3c05012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 10/10/2023] [Accepted: 10/12/2023] [Indexed: 11/04/2023]
Abstract
Spodoptera frugiperda is a highly destructive migratory pest that threatens various crops globally. Autographa californica multiple nucleopolyhedrovirus (AcMNPV) is an effective biocontrol agent against lepidopteran pests. Here, we explored the molecular mechanisms underlying the immune response to AcMNPV infection in S. frugiperda. RNA-seq and quantitative reverse transcription-polymerase chain reaction (qRT-PCR) analyses identified the Toll, IMD, and apoptosis pathways as primary immune responses. Investigation into AcMNPV-induced apoptosis in the S. frugiperda cell line (Sf9) revealed that the Toll pathway activated the JNK via the TRAF6 (TNF receptor-associated factor 6) adapter. In addition, AcMNPV-induced the differential expression of several host-encoded microRNAs (miRNAs), with significant negative regulatory effects, on S. frugiperda antiviral immune genes. RNAi and miRNA-mimic mediated silencing of these genes resulted in increased AcMNPV proliferation. Our findings reinforce the potential of AcMNPV as a potent biocontrol agent and further our understanding of developing biotechnology-based targeted pest control agents.
Collapse
Affiliation(s)
- Jie Zhang
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Junaid Zafar
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Jinrong Kong
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Fei Wang
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Xuehua Shao
- Institute
of Fruit Tree Research, Guangdong Academy of Agricultural Sciences,
Key Laboratory of South Subtropical Fruit Biology and Genetic Resource
Utilization, Ministry of Agriculture and Rural Affairs, Guangdong Provincial Key Laboratory of Tropical and
Subtropical Fruit Tree Research, Guangzhou 510640, China
| | - Ruonan Zhang
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Rui Pang
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Hanhong Xu
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Xiaoxia Xu
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| | - Fengliang Jin
- National
Key Laboratory of Green Pesticide, “Belt and Road” Technology
Industry and Innovation Institute for Green and Biological Control
of Agricultural Pests, College of Plant
Protection, South China Agricultural University, Guangzhou 510642, China
| |
Collapse
|