Isotopologue enrichment factors of N(2)O reduction in soils

Sources of nitrous oxide emissions from hydroponic tomato cultivation: Evidence from stable isotope analyses

Introduction

Hydroponic vegetable cultivation is characterized by high intensity and frequent nitrogen fertilizer application, which is related to greenhouse gas emissions, especially in the form of nitrous oxide (N₂O). So far, there is little knowledge about the sources of N₂O emissions from hydroponic systems, with the few studies indicating that denitrification could play a major role.

Methods

Here, we use evidence from an experiment with tomato plants (Solanum lycopersicum) grown in a hydroponic greenhouse setup to further shed light into the process of N₂O production based on the N₂O isotopocule method and the ¹⁵N tracing approach. Gas samples from the headspace of rock wool substrate were collected prior to and after ¹⁵N labeling at two occasions using the closed chamber method and analyzed by gas chromatography and stable isotope ratio mass spectrometry.

Results

The isotopocule analyses revealed that either heterotrophic bacterial denitrification (bD) or nitrifier denitrification (nD) was the major source of N₂O emissions, when a typical nutrient solution with a low ammonium concentration (1-6 mg L^-1) was applied. Furthermore, the isotopic shift in ¹⁵N site preference and in δ¹⁸O values indicated that approximately 80-90% of the N₂O produced were already reduced to N₂ by denitrifiers inside the rock wool substrate. Despite higher concentrations of ammonium present during the ¹⁵N labeling (30-60 mg L^-1), results from the ¹⁵N tracing approach showed that N₂O mainly originated from bD. Both, ¹⁵N label supplied in the form of ammonium and ¹⁵N label supplied in the form of nitrate, increased the ¹⁵N enrichment of N₂O. This pointed to the contribution of other processes than bD. Nitrification activity was indicated by the conversion of small amounts of ¹⁵N-labeled ammonium into nitrate.

Discussion/Conclusion

Comparing the results from N₂O isotopocule analyses and the ¹⁵N tracing approach, likely a combination of bD, nD, and coupled nitrification and denitrification (cND) was responsible for the vast part of N₂O emissions observed in this study. Overall, our findings help to better understand the processes underlying N₂O and N₂ emissions from hydroponic tomato cultivation, and thereby facilitate the development of targeted N₂O mitigation measures.

FRAME-Monte Carlo model for evaluation of the stable isotope mixing and fractionation

Bayesian stable isotope mixing models are widely used in geochemical and ecological studies for partitioning sources that contribute to various mixtures. However, none of the existing tools allows accounting for the influence of processes other than mixing, especially stable isotope fractionation. Bridging this gap, new software for the stable isotope Fractionation And Mixing Evaluation (FRAME) has been developed with a user-friendly graphical interface (malewick.github.io/frame). This calculation tool allows simultaneous sources partitioning and fractionation progress determination based on the stable isotope composition of sources/substrates and mixture/products. The mathematical algorithm applies the Markov-Chain Monte Carlo model to estimate the contribution of individual sources and processes, as well as the probability distributions of the calculated results. The performance of FRAME was comprehensively tested and practical applications of this modelling tool are presented with simple theoretical examples and stable isotope case studies for nitrates, nitrites, water and nitrous oxide. The open mathematical design, featuring custom distributions of source isotope signatures, allows for the implementation of additional processes that alternate the characteristics of the final mixture and its application for various range of studies.

Influences of carbon sources on N2O production during denitrification in freshwaters: Activity, isotopes and functional microbes

Denitrification is one of the major sources of N₂O in freshwaters. Diverse forms of organic compounds act as the electron donors for microbial denitrification. However, the influences of carbon sources on N₂O production, N₂O reduction, isotope fractionation and functional microbes during denitrification were largely unknown. In this study, five forms of carbon sources (i.e. acetate, citrate, glucose, cellobiose and leucine) were used to enrich denitrifiers in freshwater sediments. N₂O conversion in the enrichments was investigated by a combination of inhibition technique, natural stable isotope method and metagenomics. Acetylene was effective in inhibiting N₂O reduction without influencing the isotopic characteristics during N₂O production. Glucose led to the least N₂O production and reduction, in accordance with the lowest abundance of both NO and N₂O reductases in this enrichment. δ¹⁸O and site preference value (SP, =δ¹⁵N^α-δ¹⁵N^β) of N₂O were sensitive to discriminate the five carbon sources, except when comparing acetate and leucine. Isotopic values of N₂O were not significantly different in these two enrichments due to the similarity of NO reductases - Pseudomonas-type cNorB. Specifically, the enrichment with cellobiose produced N₂O with the lowest δ¹⁸O values (39.4‰±1.1‰), due to Alicycliphilus with both cNorB and qNorB. The enrichment with glucose led to the highest SP values (8.9‰±8.6‰), caused by Thiobacillus-type cNorB. Our results demonstrated the link between carbon sources, N₂O production and reduction, isotopic signatures, microbial populations and enzymes during denitrification in freshwaters.

Distinguishing N2O and N2 ratio and their microbial source in soil fertilized for vegetable production using a stable isotope method

Vegetable production systems with excessive nitrogen fertilizer result in severe N₂O emission. It is pivotal to identify the source of N₂O for reducing N₂O emission, but estimating microbial pathways of N₂O production is very difficult due to the existence of N₂O reduction. A promising tool can address this problem by using δ¹⁸O and δ¹⁵N^SP of N₂O to construct a dual isotopocule plot. For ascertaining the microbial pathways of N₂O production and consumption in soil fertilized for vegetable production, four treatments were set up: urea (U), half urea and half organic fertilizer (UO), organic fertilizer (O) and no fertilizer (NF), and the experiment was carried out continuously for two years. The δ¹⁸O vs. δ¹⁵N^SP plot method indicated that the nitrification/fungal denitrification was a dominant in N₂O emission, and the U treatment was the highest, followed by OU, O and NF in the both years. Among the different treatments, furthermore, the N₂O flux had the same trend, whereas the extent of N₂O reduction showed an opposite trend. Overall, inorganic fertilizer enhances nitrification/fungal denitrification and hinders reduction of N₂O to N₂, resulting in a larger amount of N₂O emission. However, organic fertilizer increases the contribution of denitrification and greatly improves the extent of N₂O reduction, which helps to reduce N₂O emission. Therefore, organic fertilizer is crucial to reducing N₂O emission by enhancing N₂O reduction and should be properly applied in production practice.

Source partitioning using N2O isotopomers and soil WFPS to establish dominant N2O production pathways from different pasture sward compositions

Nitrous oxide (N₂O) is a potent greenhouse gas (GHG) emitted from agricultural soils and is influenced by nitrogen (N) fertiliser management and weather and soil conditions. Source partitioning N₂O emissions related to management practices and soil conditions could suggest effective mitigation strategies. Multispecies swards can maintain herbage yields at reduced N fertiliser rates compared to grass monocultures and may reduce N losses to the wider environment. A restricted-simplex centroid experiment was used to measure daily N₂O fluxes and associated isotopomers from eight experimental plots (7.8 m²) post a urea-N fertiliser application (40 kg N ha^-1). Experimental pastures consisted of differing proportions of grass, legume and forage herb represented by perennial ryegrass (Lolium perenne), white clover (Trifolium repens) and ribwort plantain (Plantago lanceolata), respectively. N₂O isotopomers were measured using a cavity ring down spectroscopy (CRDS) instrument adapted with a small sample isotope module (SSIM) for the analysis of gas samples ≤20 mL. Site preference (SP = δ¹⁵N^α - δ¹⁵N^β) and δ¹⁵N^bulk ((δ¹⁵N^α + δ¹⁵N^β) / 2) values were used to attribute N₂O production to nitrification, denitrification or a mixture of both nitrification and denitrification over a range of soil WFPS (%). Daily N₂O fluxes ranged from 8.26 to 86.86 g N₂O-N ha^-1 d^-1. Overall, 34.2% of daily N₂O fluxes were attributed to nitrification, 29.0% to denitrification and 36.8% to a mixture of both. A significant diversity effect of white clover and ribwort plantain on predicted SP and δ¹⁵N^bulk indicated that the inclusion of ribwort plantain may decrease N₂O emission through biological nitrification inhibition under drier soil conditions (31%-75% WFPS). Likewise, a sharp decline in predicted SP indicates that increased white clover content could increase N₂O emissions associated with denitrification under elevated soil moisture conditions (43%-77% WFPS). Biological nitrification inhibition from ribwort plantain inclusion in grassland swards and management of N fertiliser source and application timing to match soil moisture conditions could be useful N₂O mitigation strategies.

Biologically mediated release of endogenous N2O and NO2 gases in a hydrothermal, hypoxic subterranean environment

The migration of geogenic gases in continental areas with geothermal activity and active faults is an important process releasing greenhouse gases (GHG) to the lower troposphere. In this respect, caves in hypogenic environments are natural laboratories to study the compositional evolution of deep-endogenous fluids through the Critical Zone. Vapour Cave (Alhama, Murcia, Spain) is a hypogenic cave formed by the upwelling of hydrothermal CO₂-rich fluids. Anomalous concentrations of N₂O and NO₂ were registered in the cave's subterranean atmosphere, averaging ten and five times the typical atmospheric backgrounds, respectively. We characterised the thermal conditions, gaseous compositions, sediments, and microbial communities at different depths in the cave. We did so to understand the relation between N-cycling microbial groups and the production and transformation of nitrogenous gases, as well as their coupled evolution with CO₂ and CH₄ during their migration through the Critical Zone to the lower troposphere. Our results showed an evident vertical stratification of selected microbial groups (Archaea and Bacteria) depending on the environmental parameters, including O₂, temperature, and GHG concentration. Both the N₂O isotope ratios and the predicted ecological functions of bacterial and archaeal communities suggest that N₂O and NO₂ emissions mainly depend on the nitrification by ammonia-oxidising microorganisms. Denitrification and abiotic reactions of the reactive intermediates NH₂OH, NO, and NO₂^- are also plausible according to the results of the phylogenetic analyses of the microbial communities. Nitrite-dependent anaerobic methane oxidation by denitrifying methanotrophs of the NC10 phylum was also identified as a post-genetic process during migration of this gas to the surface. To the best of our knowledge, our report provides, for the first time, evidence of a niche densely populated by Micrarchaeia, which represents more than 50% of the total archaeal abundance. This raises many questions on the metabolic behaviour of this and other archaeal phyla.

Quantifying N2O reduction to N2 during denitrification in soils via isotopic mapping approach: Model evaluation and uncertainty analysis

The last step of denitrification, i.e. the reduction of N₂O to N₂, has been intensively studied in the laboratory to understand the denitrification process, predict nitrogen fertiliser losses, and to establish mitigation strategies for N₂O. However, assessing N₂ production via denitrification at large spatial scales is still not possible due to lack of reliable quantitative approaches. Here, we present a novel numerical "mapping approach" model using the δ¹⁵N^sp/δ¹⁸O slope that has been proposed to potentially be used to indirectly quantify N₂O reduction to N₂ at field or larger spatial scales. We evaluate the model using data obtained from seven independent soil incubation studies conducted under a He-O₂ atmosphere. Furthermore, we analyse the contribution of different parameters to the uncertainty of the model. The model performance strongly differed between studies and incubation conditions. Re-evaluation of the previous data set demonstrated that using soils-specific instead of default endmember values could largely improve model performance. Since the uncertainty of modelled N₂O reduction was relatively high, further improvements to estimate model parameters to obtain more precise estimations remain an on-going matter, e.g. by determination of soil-specific isotope fractionation factors and isotopocule endmember values of N₂O production processes using controlled laboratory incubations. The applicability of the mapping approach model is promising with an increasing availability of real-time and field based analysis of N₂O isotope signatures.

Biochar amendment suppresses N2 O emissions but has no impact on 15 N site preference in an anaerobic soil

RATIONALE

Biochar amendments often decrease N₂ O gas production from soil, but the mechanisms and magnitudes are still not well characterized since N₂ O can be produced via several different microbial pathways. We evaluated the influence of biochar amendment on N₂ O emissions and N₂ O isotopic composition, including ¹⁵ N site preference (SP) under anaerobic conditions.

METHODS

An agricultural soil was incubated with differing levels of biochar. Incubations were conducted under anaerobic conditions for 10 days with and without acetylene, which inhibits N₂ O reduction to N₂ . The N₂ O concentrations were measured every 2 days, the SPs were determined after 5 days of incubation, and the inorganic nitrogen concentrations were measured after the incubation.

RESULTS

The SP values with acetylene were consistent with N₂ O production by bacterial denitrification and those without acetylene were consistent with bacterial denitrification that included N₂ O reduction to N₂ . There was no effect of biochar on N₂ O production in the presence of acetylene between day 3 and day 10. However, in the absence of acetylene, soils incubated with 4% biochar produced less N₂ O than soils with no biochar addition. Different amounts of biochar amendment did not change the SP values.

CONCLUSIONS

Our study used N₂ O emission rates and SP values to understand biochar amendment mechanisms and demonstrated that biochar amendment reduces N₂ O emissions by stimulating the last step of denitrification. It also suggested a possible shift in N₂ O-reducing microbial taxa in 4% biochar samples.

Estimating N2 O processes during grassland renewal and grassland conversion to maize cropping using N2 O isotopocules

RATIONALE

Enhanced nitrous oxide (N₂ O) emissions can occur following grassland break-up for renewal or conversion to maize cropping, but knowledge about N₂ O production pathways and N₂ O reduction to N₂ is very limited. A promising tool to address this is the combination of mass spectrometric analysis of N₂ O isotopocules and an enhanced approach for data interpretation.

METHODS

The isotopocule mapping approach was applied to field data using a δ¹⁵ N^sp_N2O and δ¹⁸ O_N2O map to simultaneously determine N₂ O production pathways contribution and N₂ O reduction for the first time. Based on the isotopic composition of N₂ O produced and literature values for specific N₂ O pathways, it was possible to distinguish: (i) heterotrophic bacterial denitrification and/or nitrifier denitrification and (ii) nitrification and/or fungal denitrification and the contribution of N₂ O reduction.

RESULTS

The isotopic composition of soil-emitted N₂ O largely resembled the known end-member values for bacterial denitrification. The isotopocule mapping approach indicated different effects of N₂ O reduction on the isotopic composition of soil-emitted N₂ O for the two soils under study. Differing N₂ O production pathways in different seasons were not observed, but management events and soil conditions had a significant impact on pathway contribution and N₂ O reduction. N₂ O reduction data were compared with a parallel ¹⁵ N-labelling experiment.

CONCLUSIONS

The field application of the isotopocule mapping approach opens up new prospects for studying N₂ O production and consumption of N₂ O in soil simultaneously based on mass spectrometric analysis of natural abundance N₂ O. However, further studies are needed in order to properly validate the isotopocule mapping approach.

Evidence for fungal and chemodenitrification based N2O flux from nitrogen impacted coastal sediments

Although increasing atmospheric nitrous oxide (N₂O) has been linked to nitrogen loading, predicting emissions remains difficult, in part due to challenges in disentangling diverse N₂O production pathways. As coastal ecosystems are especially impacted by elevated nitrogen, we investigated controls on N₂O production mechanisms in intertidal sediments using novel isotopic approaches and microsensors in flow-through incubations. Here we show that during incubations with elevated nitrate, increased N₂O fluxes are not mediated by direct bacterial activity, but instead are largely catalysed by fungal denitrification and/or abiotic reactions (e.g., chemodenitrification). Results of these incubations shed new light on nitrogen cycling complexity and possible factors underlying variability of N₂O fluxes, driven in part by fungal respiration and/or iron redox cycling. As both processes exhibit N₂O yields typically far greater than direct bacterial production, these results emphasize their possibly substantial, yet widely overlooked, role in N₂O fluxes, especially in redox-dynamic sediments of coastal ecosystems.

Stable Isotopes Reveal Rapid Cycling of Soil Nitrogen after Manure Application

Understanding the fate of applied nitrogen (N) in agricultural soils is important for agronomic, environmental, and human health reasons, but it is methodologically difficult to study at the field scale. Natural abundance stable isotope measurements (δN) were used in this field study with micrometeorological measurements of nitrous oxide (NO) emissions to identify the biogeochemical processes responsible for rapid N transformations immediately after application of liquid dairy manure. Fifteen samplings occurred between 16 Mar. 2012 and 5 Apr. 2013, with a focus on spring manure application (before and after) and a winter snowmelt period. Concentrations and δN values of ammonium (NH), nitrate (NO), NO, and total N were measured throughout the year. Approximately 56 (±7)% of the NH-N applied in the spring could not be accounted for 3 d after manure application and was presumably lost by ammonia volatilization before it was tilled into the soil and/or removed from the inorganic N pool by microbial assimilation. Almost all of the remaining manure-NH (95 ± 1.1%) was converted within 3 wk to NO and NO by nitrification and nitrifier-denitrification, respectively. The in situ N isotope effect for nitrification (ε) was calculated to be -32.0 (±5.3)‰. Overall, field-scale measurements of δN at natural abundance provided valuable information that was used to distinguish sources of NH (manure vs. soil organic N) and to follow the production and consumption of NO and the pathways of NO production in soil.

Influence of Lumbricus terrestris and Folsomia candida on N2 O formation pathways in two different soils - with particular focus on N2 emissions

RATIONALE

The gaseous N losses mediated by soil denitrifiers are generally inferred by measuring N₂ O fluxes, but should include associated N₂ emissions, which may be affected by abiotic soil characteristics and biotic interactions. Soil fauna, particularly anecic earthworms and euedaphic collembola, alter the activity of denitrifiers, creating hotspots for denitrification. These soil fauna are abundant in perennial agroecosystems intended to contribute to more sustainable production of bioenergy.

METHODS

Two microcosm experiments were designed to evaluate gaseous N emissions from a silty loam and a sandy soil, both provided with litter from the bioenergy crop Silphium perfoliatum (cup-plant) and inoculated with an anecic earthworm (Lumbricus terrestris), which was added alone or together with an euedaphic collembola (Folsomia candida). In experiment 1, litter-derived N flux was determined by adding ¹⁵ N-labelled litter, followed by mass spectrometric analysis of N₂ and N₂ O isotopologues. In experiment 2, the δ¹⁸ O values and ¹⁵ N site preference of N₂ O were determined by isotope ratio mass spectrometry to reveal underlying N₂ O formation pathways.

RESULTS

Lumbricus terrestris significantly increased litter-derived N₂ emissions in the loamy soil, from 174.5 to 1019.3 μg N₂ -N kg^-1 soil, but not in the sandy soil (non-significant change from 944.7 to 1054.7 μg N₂ -N kg^-1 soil). Earthworm feeding on plant litter resulted in elevated N₂ O emissions in both soils, derived mainly from turnover of the soil mineral N pool during denitrification. Folsomia candida did not affect N losses but showed a tendency to redirect N₂ O formation pathways from fungal to bacterial denitrification. The N₂ O/(N₂  + N₂ O) product ratio was predominantly affected by abiotic soil characteristics (loamy soil: 0.14, sandy soil: 0.26).

CONCLUSIONS

When feeding on S. perfoliatum litter, the anecic L. terrestris, but not the euedaphic F. candida, has the potential to cause substantial N losses. Biotic interactions between the species are not influential, but abiotic soil characteristics have an effect. The coarse-textured sandy soil had lower gaseous N losses attributable to anecic earthworms. Copyright © 2016 John Wiley & Sons, Ltd.

N2O source partitioning in soils using (15)N site preference values corrected for the N2O reduction effect

RATIONALE

The aim of this study was to determine the impact of isotope fractionation associated with N2O reduction during soil denitrification on N2O site preference (SP) values and hence quantify the potential bias on SP-based N2O source partitioning.

METHODS

The N2O SP values (n = 431) were derived from six soil incubation studies in N2-free atmosphere, and determined by isotope ratio mass spectrometry (IRMS). The N2 and N2O concentrations were measured directly by gas chromatography. Net isotope effects (NIE) during N2O reduction to N2 were compensated for using three different approaches: a closed-system model, an open-system model and a dynamic apparent NIE function. The resulting SP values were used for N2O source partitioning based on a two end-member isotopic mass balance.

RESULTS

The average SP0 value, i.e. the average SP values of N2O prior to N2O reduction, was recalculated with the closed-system model, resulting in -2.6 ‰ (±9.5), while the open-system model and the dynamic apparent NIE model gave average SP0 values of 2.9 ‰ (±6.3) and 1.7 ‰ (±6.3), respectively. The average source contribution of N2O from nitrification/fungal denitrification was 18.7% (±21.0) according to the closed-system model, while the open-system model and the dynamic apparent NIE function resulted in values of 31.0% (±14.0) and 28.3% (±14.0), respectively.

CONCLUSIONS

Using a closed-system model with a fixed SP isotope effect may significantly overestimate the N2O reduction effect on SP values, especially when N2O reduction rates are high. This is probably due to soil inhomogeneity and can be compensated for by the application of a dynamic apparent NIE function, which takes the variable reduction rates in soil micropores into account.

Isotope fractionation factors controlling isotopocule signatures of soil-emitted N₂O produced by denitrification processes of various rates

RATIONALE

This study aimed (i) to determine the isotopic fractionation factors associated with N2O production and reduction during soil denitrification and (ii) to help specify the factors controlling the magnitude of the isotope effects. For the first time the isotope effects of denitrification were determined in an experiment under oxic atmosphere and using a novel approach where N2O production and reduction occurred simultaneously.

METHODS

Soil incubations were performed under a He/O2 atmosphere and the denitrification product ratio [N2O/(N2 + N2O)] was determined by direct measurement of N2 and N2O fluxes. N2O isotopocules were analyzed by mass spectrometry to determine δ(18)O, δ(15)N and (15)N site preference within the linear N2O molecule (SP). An isotopic model was applied for the simultaneous determination of net isotope effects (η) of both N2O production and reduction, taking into account emissions from two distinct soil pools.

RESULTS

A clear relationship was observed between (15)N and (18)O isotope effects during N2O production and denitrification rates. For N2O reduction, diverse isotope effects were observed for the two distinct soil pools characterized by different product ratios. For moderate product ratios (from 0.1 to 1.0) the range of isotope effects given by previous studies was confirmed and refined, whereas for very low product ratios (below 0.1) the net isotope effects were much smaller.

CONCLUSIONS

The fractionation factors associated with denitrification, determined under oxic incubation, are similar to the factors previously determined under anoxic conditions, hence potentially applicable for field studies. However, it was shown that the η(18)O/η(15)N ratios, previously accepted as typical for N2O reduction processes (i.e., higher than 2), are not valid for all conditions.

Isotopologue ratios of N2O and N2 measurements underpin the importance of denitrification in differently N-loaded riparian alder forests

Known as biogeochemical hotspots in landscapes, riparian buffer zones exhibit considerable potential concerning mitigation of groundwater contaminants such as nitrate, but may in return enhance the risk for indirect N2O emission. Here we aim to assess and to compare two riparian gray alder forests in terms of gaseous N2O and N2 fluxes and dissolved N2O, N2, and NO3(-) in the near-surface groundwater. We further determine for the first time isotopologue ratios of N2O dissolved in the riparian groundwater in order to support our assumption that it mainly originated from denitrification. The study sites, both situated in Estonia, northeastern Europe, receive contrasting N loads from adjacent uphill arable land. Whereas N2O emissions were rather small at both sites, average gaseous N2-to-N2O ratios inferred from closed-chamber measurements and He-O laboratory incubations were almost four times smaller for the heavily loaded site. In contrast, groundwater parameters were less variable among sites and between landscape positions. Campaign-based average (15)N site preferences of N2O (SP) in riparian groundwater ranged between 11 and 44 ‰. Besides the strong prevalence of N2 emission over N2O fluxes and the correlation pattern between isotopologue and water quality data, this comparatively large range highlights the importance of denitrification and N2O reduction in both riparian gray alder stands.

Proper interpretation of dissolved nitrous oxide isotopes, production pathways, and emissions requires a modelling approach

Stable isotopes ([Formula: see text]15N and [Formula: see text]18O) of the greenhouse gas N2O provide information about the sources and processes leading to N2O production and emission from aquatic ecosystems to the atmosphere. In turn, this describes the fate of nitrogen in the aquatic environment since N2O is an obligate intermediate of denitrification and can be a by-product of nitrification. However, due to exchange with the atmosphere, the [Formula: see text] values at typical concentrations in aquatic ecosystems differ significantly from both the source of N2O and the N2O emitted to the atmosphere. A dynamic model, SIDNO, was developed to explore the relationship between the isotopic ratios of N2O, N2O source, and the emitted N2O. If the N2O production rate or isotopic ratios vary, then the N2O concentration and isotopic ratios may vary or be constant, not necessarily concomitantly, depending on the synchronicity of production rate and source isotopic ratios. Thus prima facie interpretation of patterns in dissolved N2O concentrations and isotopic ratios is difficult. The dynamic model may be used to correctly interpret diel field data and allows for the estimation of the gas exchange coefficient, N2O production rate, and the production-weighted [Formula: see text] values of the N2O source in aquatic ecosystems. Combining field data with these modelling efforts allows this critical piece of nitrogen cycling and N2O flux to the atmosphere to be assessed.

Soil denitrification potential and its influence on N2O reduction and N2O isotopomer ratios

RATIONALE

N2O isotopomer ratios may provide a useful tool for studying N2O source processes in soils and may also help estimating N2O reduction to N2. However, remaining uncertainties about different processes and their characteristic isotope effects still hamper its application. We conducted two laboratory incubation experiments (i) to compare the denitrification potential and N2O/(N2O+N2) product ratio of denitrification of various soil types from Northern Germany, and (ii) to investigate the effect of N2O reduction on the intramolecular (15)N distribution of emitted N2O.

METHODS

Three contrasting soils (clay, loamy, and sandy soil) were amended with nitrate solution and incubated under N2 -free He atmosphere in a fully automated incubation system over 9 or 28 days in two experiments. N2O, N2, and CO2 release was quantified by online gas chromatography. In addition, the N2O isotopomer ratios were determined by isotope-ratio mass spectrometry (IRMS) and the net enrichment factors of the (15)N site preference (SP) of the N2O-to-N2 reduction step (η(SP)) were estimated using a Rayleigh model.

RESULTS

The total denitrification rate was highest in clay soil and lowest in sandy soil. Surprisingly, the N2O/(N2O+N2) product ratio in clay and loam soil was identical; however, it was significantly lower in sandy soil. The IRMS measurements revealed highest N2O SP values in clay soil and lowest SP values in sandy soil. The η(SP) values of N2O reduction were between -8.2 and -6.1‰, and a significant relationship between δ(18)O and SP values was found.

CONCLUSIONS

Both experiments showed that the N2O/(N2O+N2) product ratio of denitrification is not solely controlled by the available carbon content of the soil or by the denitrification rate. Differences in N2O SP values could not be explained by variations in N2O reduction between soils, but rather originate from other processes involved in denitrification. The linear δ(18)O vs SP relationship may be indicative for N2O reduction; however, it deviates significantly from the findings of previous studies.

Isotopic signatures of N2O produced by ammonia-oxidizing archaea from soils

N2O gas is involved in global warming and ozone depletion. The major sources of N2O are soil microbial processes. Anthropogenic inputs into the nitrogen cycle have exacerbated these microbial processes, including nitrification. Ammonia-oxidizing archaea (AOA) are major members of the pool of soil ammonia-oxidizing microorganisms. This study investigated the isotopic signatures of N2O produced by soil AOA and associated N2O production processes. All five AOA strains (I.1a, I.1a-associated and I.1b clades of Thaumarchaeota) from soil produced N2O and their yields were comparable to those of ammonia-oxidizing bacteria (AOB). The levels of site preference (SP), δ(15)N(bulk) and δ(18)O -N2O of soil AOA strains were 13-30%, -13 to -35% and 22-36%, respectively, and strains MY1-3 and other soil AOA strains had distinct isotopic signatures. A (15)N-NH4(+)-labeling experiment indicated that N2O originated from two different production pathways (that is, ammonia oxidation and nitrifier denitrification), which suggests that the isotopic signatures of N2O from AOA may be attributable to the relative contributions of these two processes. The highest N2O production yield and lowest site preference of acidophilic strain CS may be related to enhanced nitrifier denitrification for detoxifying nitrite. Previously, it was not possible to detect N2O from soil AOA because of similarities between its isotopic signatures and those from AOB. Given the predominance of AOA over AOB in most soils, a significant proportion of the total N2O emissions from soil nitrification may be attributable to AOA.