The sensing mechanism studies of the fluorescent probes with electronically excited state calculations

Theoretical insights into the linker effects on the turn-on fluorescence behaviors in pyridazinone-containing NO probes

Fluorescent probes with preferred photophysical properties have attracted considerable attention for their advantages in real-time and accurate detection of signalling molecules in living organisms. Nitric oxide (NO) is a ubiquitous cellular messenger closely associated with many physiological and pathological processes. A NO fluorescent probe, PYSNO, based on the pyridazinone (PY) scaffold with o-phenylenediamine as the receptor and thiophene (S) as the linker has been synthesized. Inspired by the experimental guidance, three other dyes (PYSSNO, PYSONO and PYONO) were theoretically designed by replacing the S linker with thieno[3,2-b]thiophene (SS), thieno[3,2-b]thiophene 1,1-dioxide (SO) and thiophene 1,1-dioxide (O) groups. The photophysical properties were theoretically investigated in aqueous solution, by the combined time-dependent density functional theory, polarizable continuum model and thermal vibration correlation function approaches. Our results indicate that the emission wavelengths of all the designed dyes show red shifts due to either an increase in the conjugation length or electron-accepting ability of the linkers compared to PYSNO. The photoinduced electron transfer (PET) processes are all absent in these systems. PYSSNO and PYSONO are theoretically expected to be promising candidates for novel NO fluorescent probes, but the suitability of PYONO as a NO probe is compromised by the predicted non-luminescent emission before and after reaction with NO. Our study not only offers valuable insights into the detailed structure-property relationships, but also opens a new avenue for the rational design of efficient fluorescent sensors for NO detection.

Theoretical Investigations on the Sensing Mechanism of Dicyanoisophorone Fluorescent Probe for the Detection of Hydrogen Sulfide

As one of the biomolecules, hydrogen sulfide (H2S) has received a lot of attention. Recent studies have shown that endogenous hydrogen sulfide plays different roles in different organs in biological systems. Fluorescent probe technology has been widely adopted due to its many advantages such as low cost, simple operation, and high sensitivity. Among many probes, dicyanoisophorone fluorophore is often used in probe design for real-time detection of endogenous H2S due to the large Stokes shift and long fluorescence emission wavelength. In this paper, the fluorescence sensing mechanism of dicyanoisophorone-like probe L and its product 3 with near-infrared fluorescence emission has been theoretically investigated by using theory methods. The analysis of infrared (IR) vibration spectra and reduced density gradient (RDG) showed that the hydrogen bond of the enolic structure of product 3 was significantly enhanced in the S1 state. The spectroscopic information revealed that the emission of NIR fluorescence originated from the keto structure of the product. Finally, potential energy curves and frontier molecular orbitals diagrams showed that the fluorescence quenching phenomenon of the probe L was attributed to the photoinduced electron transfer (PET) process, whereas the product 3 generated after the detection of H2S undergoes the excited state intramolecular proton transfer (ESIPT) process.

A highly sensitive and colorimetric fluorescent probe for visualizing hydroxylamine in immune cells

BACKGROUND

Hydroxylamine (HA) is vital industrial raw material and pharmaceutical intermediate. In addition, HA is an important cellular metabolite, which is intermediate in the formation of nitric oxide and nitroxide. However, excessive amounts of HA are toxic to both animals and plants. Conventional methods for the detection of HA are cumbersome and complicated. The detection of HA with fluorescent probes is convenient and sensitive. There are few probes available for the detection of hydroxylamine. Therefore, a fluorescent probe for the sensitive and selective detection of HA was developed in this work.

RESULTS

A coumarin derivative SWJT-22 was synthesized as a colorimetric fluorescent probe to detect hydroxylamine (HA), with high sensitivity and selectivity. The detection limit of the probe to HA was 0.15 μM, which was lower than most probes of HA. Upon the addition of HA to aqueous solution containing SWJT-22, the color of the solution changed from orange to yellow, and the fluorescence color also changed from orange to green. The reaction mechanism of SWJT-22 to HA was confirmed by 1H NMR titrations, mass spectrometry and round bottom flask experiments. Moreover, SWJT-22 had been fabricated into portable test strips for the detection of HA. SWJT-22 had been successfully used in cellular imaging and could detect both endogenous and exogenous HA in HeLa cells and RAW 264.7 cells.

SIGNIFICANCE

Due to the physiological role of hydroxylamine in organisms, it is crucial to detect hydroxylamine selectively and sensitively. This work provided a convenient tool for the detection of hydroxylamine, not only to detect endogenous and exogenous HA in cells, but also made into portable test strips. The HA fluorescent probe SWJT-22 is expected to promote the study of HA in physiological processes.

Computational explorations about the solvent-polarity-associated excited state proton transfer behaviors for the novel F-BSD compound

CONTEXT

Inspired by the excellent potential application prospects from the precisely controlled attributes displayed by fluorine-substituted-bis(salicylidene)-1,5-diaminonaphthalene (F-BSD) and its derivatives in the domains of photochemistry and photophysics, our present undertaking predominantly focuses on exploring the complexities of photo-induced excited state reactions for F-BSD fluorophores dissolved in solvents with diverse levels of polarity. Our simulations reveal that the excited state intramolecular double proton transfer (ESIDPT) reaction for F-BSD chemosensor can be significantly regulated by solvent polarity-dependent hydrogen bonding interactions and charge recombination induced by photoexcitation, which result from variations in geometries and vertical excitation charge reorganizations. By constructing potential energy surfaces (PESs), we also demonstrate that the stepwise ESIDPT reaction of F-BSD occurs with alternative dual intramolecular hydrogen bonds (O1-H2···N3 or O4-H5···N6). Interestingly, we affirm polar solvents should be conducive to the first-step of ESIDPT process, while nonpolar solvents are in favor of the second step. We sincerely hope solvent polarity-dependent ESIDPT behavior will pave the way for future design of novel luminescent materials.

METHODS

The molecular geometries were optimized by DFT//TDDFT D3-B3LYP/TZVP theoretical level with IEFPCM solvent model in S0 and S1 states, respectively. This work also explores the energy level of target molecules with the computational vertical absorption spectra by TDDFT. All the simulations were carried out based on Gaussian 16 software. The core-valence bifurcation (CVB) indexes were obtained by using Multiwfn 3.8. Potential energy surfaces were constructed by the DFT//TDDFT D3-B3LYP/TZVP level based on restricted optimization, also the transition state (TS) forms were searched using the same level.

Computational Investigation about the Effects of Solvent Polarity and Chalcogen Element Electronegativity on ESIPT Behaviors for the Et2N-Substituted Flavonoid

Inspired by the outstanding nature of flavonoid derivatives in the fields of chemistry and medicine, in this work we mainly focus on exploring the photo-induced properties of the novel Et2N-substituted flavonoid (ENF) fluorophore theoretically. Considering the potential photo-induced properties in different solvents and the chalcogen atomic electronegativity-associated photoexcitation, by time-dependent density functional theory (TDDFT) methods we primarily explore the intramolecular hydrogen bonding interactions and photo-induced charge redistribution behaviors. Via comparing geometrical data and the infrared (IR) spectral shifts-associated hydroxy moiety of ENF, we confirm that the intramolecular hydrogen bond O-H···O should be enhanced with facilitating an excited-state intramolecular proton-transfer (ESIPT) reaction. Particularly, the charge reorganization around hydrogen bonding moieties further reveals the tendency of ESIPT behavior. Combined with the construction of the potential energy surface and the search for reaction transition states, we finally confirmed the solvent-polarity-regulated behaviors as well as the chalcogen elements' electronegativity-dependent ESIPT mechanisms for the ENF fluorophore. We sincerely wish our work could accelerate the further development and applications of flavonoid derivatives.

Theoretical insights into excited state behaviors of D3HF derivatives via altering atomic electronegativity of chalcogen

Inspired by the distinguished photochemical characteristics of new organic molecule containing the chalcogenide substitution that could be potentially applied across various disciplines, in this work, the effects of atomic electronegativity of chalcogen (O, S and Se) on hydrogen bond interactions and proton transfer (PT) reaction. We present the characteristic 2,8-diphenyl-3,7-dihydroxy-4H,6H-pyrano[3,2-g]-chromene-4,6-dione (D3HF), which is based on 3-hydroxyflavone (3HF) and contains intramolecular double hydrogen bonds that is the main objective of this study to explore in detail the influence of the change of atomic electronegativity on the dual hydrogen bond interaction and the excited state proton transfer (ESPT) behavior by photoexcitation. By comparing the structural changes and infrared (IR) vibrational spectra of the D3HF derivatives (D3HF-O, D3HF-S and D3HF-Se) fluorophores in S0 and S1 states, combined with the preliminary detection of hydrogen bond interaction by core-valence bifurcation (CVB) index, we can conclude that the hydrogen bond is strengthened in S1 state, which is favorable for the occurrence of ESPT reactions. The charge recombination behavior of hydrogen bond induced by photoexcitation also further illustrates this point. Via constructing potential energy surfaces (PESs) based on restrictive optimization, we finally clarify the excited state single PT mechanism for D3HF derivatives. Specially, we confirm change of atomic electronegativity has a regulatory effect on the ESIPT behavior of D3HF and its derivatives, that is, the lower the atomic electronegativity is more conducive to the ESIPT reaction.

Surface Hopping with Reliable Wave Function by Introducing Auxiliary Wave Packets to Trajectory Branching

It is well-known that the widely utilized fewest switches surface hopping method suffers from the severe overcoherence problem, and thus adiabatic populations calculated by wave functions are generally inferior to those based on active states. More importantly, to achieve a complete description of nonadiabatic dynamics, the density matrix is essential. In this paper, we present an auxiliary branching corrected surface hopping (A-BCSH) method that introduces auxiliary wave packets (WPs) on the adiabatic potential energy surfaces for trajectory branching. Both rapid and gradual separation of WP components on different surfaces are characterized, and thus the correct decoherence time along each trajectory is captured. As demonstrated in the three standard Tully models, A-BCSH exhibits excellent internal consistency. Namely, close adiabatic populations are obtained based on both wave functions and active states. In particular, A-BCSH successfully obtains a reliable time-dependent spatial distribution of the density matrix, which relies only on electronic wave functions. Due to its high performance, our A-BCSH method provides a new and highly promising perspective on further development of more consistent surface hopping with reliable wave function.

Effects of Chalcogen Atoms on Excited-State Double-Proton Transfer Behavior for 3,6-bis(4,5-Dihydroxyoxazo-2-yl)benzene-1,2-diol Derivatives: A Computational Investigation

The impact of the chalcogen atomic electronegativity (O, S, and Se atoms) of new organic molecules on excited-state dynamical reactions is self-evident. Inspired by this kind of distinguished photochemical characteristic, in this work, we performed a computational investigation of chalcogen-substituted 3,6-bis(4,5-dihydroxyoxazo-2-yl)benzene-1,2-diol (BDYBD) derivatives (i.e., BDYBD-O, BDYBD-S, and BDYBD-Se). In this paper, we pay close attention to characteristic BDYBD derivatives that contain intramolecular double hydrogen bonds (O1-H2···N3 and O4-H5···N6). The main goal of this study was to explore how changes in atomic electronegativity affect the way hydrogen bonds interact and how excited molecules affect transfer protons. We go into further detail in the main text of the paper. By fixing our attention to geometrical variations and infrared (IR) vibrational spectra between the S0 and S1 states, exploring hydrogen bonding behaviors using the core-valence bifurcation (CVB) index, and simulating hydrogen bonding energy (EHB) via the atom in molecule (AIM) method, we clarified the photo-induced strengthened dual hydrogen bonding interactions that facilitate the excited-state dual-proton transfer (ESDPT) behavior of BDYBD derivatives. The reorganization of charge stemming from photoexcitation further verifies the tendencies of ESDPT reactions. We relied on constructing potential energy surfaces (PESs) by adopting a restrictive optimization approach, and herein, we finally clarify the gradual ESDPT mechanism of BDYBD derivatives. Particularly, we confirm that the variation in chalcogen atomic electronegativity has a regulatory effect on the ESDPT behavior of BDYBD derivatives; that is, the lower the atomic electronegativity, the more favorable it is for the gradual ESDPT reaction.

Fluorescent-Based Neurotransmitter Sensors: Present and Future Perspectives

Neurotransmitters (NTs) are endogenous low-molecular-weight chemical compounds that transmit synaptic signals in the central nervous system. These NTs play a crucial role in facilitating signal communication, motor control, and processes related to memory and learning. Abnormalities in the levels of NTs lead to chronic mental health disorders and heart diseases. Therefore, detecting imbalances in the levels of NTs is important for diagnosing early stages of diseases associated with NTs. Sensing technologies detect NTs rapidly, specifically, and selectively, overcoming the limitations of conventional diagnostic methods. In this review, we focus on the fluorescence-based biosensors that use nanomaterials such as metal clusters, carbon dots, and quantum dots. Additionally, we review biomaterial-based, including aptamer- and enzyme-based, and genetically encoded biosensors. Furthermore, we elaborate on the fluorescence mechanisms, including fluorescence resonance energy transfer, photon-induced electron transfer, intramolecular charge transfer, and excited-state intramolecular proton transfer, in the context of their applications for the detection of NTs. We also discuss the significance of NTs in human physiological functions, address the current challenges in designing fluorescence-based biosensors for the detection of NTs, and explore their future development.

Computational Insights into Excited State Intramolecular Double Proton Transfer Behavior Associated with Atomic Electronegativity for Bis(2'-benzothiazolyl)hydroquinone

Inspired by the distinguished regulated photochemical and photophysical properties of 2-(2'-hydroxyphenyl)benzazole derivatives, in this work, the novel bis(2'-benzothiazolyl)hydroquinone (BBTHQ) fluorophore is explored, looking at its photo-induced behaviors associated with different substituted atomic electronegativities, i.e., BBTHQ-SO, BBTHQ-SS and BBTHQ-Se compounds. From the structural changes, infrared (IR) vibrational variations and simulated core-valence bifurcation (CVB) indexes for the dual hydrogen bonds for the three BBTHQ derivatives, we see that low atomic electronegativity could be conducive to enhancing hydrogen bonding effects in the S1 state. Particularly, the O4-H5⋯N6 of BBTHQ-SO and the O1-H2⋯N3 of BBTHQ-SSe could be strengthened to be more intensive in the S1 state, respectively. Looking into the charge recombination induced by photoexcitation, we confirm a favorable ESDPT trend deriving from the charge reorganization of the dual hydrogen bonding regions. By constructing the potential energy surfaces (PESs) along with the ESDPT paths for the BBTHQ-SO, BBTHQ-SS and BBTHQ-Se compounds, we not only unveil stepwise ESDPT behaviors, but also present an atomic electronegativity-regulated ESDPT mechanism.

Fluorescent Mechanism of a Highly Selective Probe for Copper(II) Detection: A Theoretical Study

A highly selective probe for copper(II) detection based on the dansyl group was theoretically studied by means of (time-dependent) density functional theory. The calculated results indicated that the oscillator strength of the fluorescent process for the probe molecule is considerably large, but the counterpart of its copper(II) complex is nearly zero; therefore, the predicted radiative rate k_r of the probe is several orders of magnitude larger than that of its complex; however, the predicted internal conversion rate k_ic of both the probe and its complex is of the same order of magnitude. In addition, the simulated intersystem crossing rate k_isc of the complex is much greater than that of the probe due to the effect of heavy atom from the copper atom in the complex. Based on the above information, the calculated fluorescence quantum yield of the probe is 0.16% and that of the complex becomes 10^-6%, which implies that the first excited state of the probe is bright state and that of the complex is dark state. For the complex, the hole-electron pair analysis indicates that the process of S₀ → S₁ belongs to metal-to-ligand charge transfer; its density-of-state diagram visually illustrates that the highest occupied molecular orbital (HOMO) contains the ingredient of the s orbital from the copper atom, which decreases the frontier orbital energy level and the overlap integral of HOMO and LUMO.

Unveiling and regulating the solvent-polarity-associated excited state intramolecular double proton transfer behavior for 1-bis(benzothiazolyl)naphthalene-diol fluorophore

Inspired by the regulatory luminescence properties of HBT derivatives, in this work, we mainly conduct a detailed theoretical exploration on the photoinduced excitation behavior of a novel di-proton-transfer type HBT derivative 1-bis(benzothiazolyl)naphthalene-diol (1-BBTND). The intramolecular double hydrogen bonding interaction and the excited state intramolecular double proton transfer (ESDPT) behavior of 1-BBTND fluorophore are investigated in combination with different polar solvent environments. From the structural changes and charge recombination induced by photoexcitation, we can conclude that strong polar solvent environment promotes the excited state dynamical reaction for 1-BBTND compound. By constructing potential energy surfaces (PESs) in S₀ and S₁ states, we clarify that 1-BBTND fluorophore should undergo a stepwise ESDPT reaction after photoexcitation. Combined with the size of potential energy barriers along with reaction paths in different solvents, we finally propose a new solvent-polarity-dependent stepwise ESDPT for 1-BBTND fluorophore.

The impact of π-π stacking interactions on photo-physical properties of hydroxyanthraquinones

The impact of π-π stacking interactions on photo-physical properties of hydroxyanthraquinone (HA) has been investigated using the density functional (DFT) and time-dependent density functional theory (TD-DFT) calculations in the gas phase and solution media. The vertical transition is characterized with strong HOMO-LUMO transition in the complexes. The intramolecular hydrogen bond (IHB) made in the HA and π-π complexes is strengthened after S₀ → S₁ excitation, such that the proton transfers is facilitated in the first excited state. The complexes exhibit an exothermic excited state intramolecular proton transfer (ESIPT) in the solution media, which is a barrierless process for some complexes. The π-π stacking interaction affects the absorption and emission bands of HA, and provides a large Stokes shift. This indicates the desirable fluorescence properties of π-π complexes, which are cross-validated by geometries, potential energy curve scannings, electronic and vibrational spectra, and frontier molecular orbital analyses.

Unveiling the effects of atomic electronegativity on ESIPT behaviors for FQ-OH system: A theoretical study

In this work, we mainly focus on exploring the effects of atomic electronegativity on excited state intramolecular proton transfer (ESIPT) behavior for novel FQ-OH derivatives theoretically. Combining analyses of geometrical changes, infrared (IR) spectral variations, and bonding energies via band critical point (BCP) parameters, we clarify the excited state hydrogen bonding strength is enhancing with decrease of atomic electronegativity. In addition, photo-induced charge reorganization and different energy gap of momentous frontier molecular orbitals (MOs) further reflect intramolecular charge transfer (ICT) promotes ESIPT reaction. Low atomic electronegativity reveals excited state high kinetic dynamics and chemical activities. Via constructing potential energy curves (PECs) and searching transition state (TS), we clarify atomic electronegativity dependent ESIPT behavior for FQ-OH. Particularly, the modification of atomic electronegativity also plays critical roles in regulating UV-Vis spectra. This work not only uncovering detailed ESIPT mechanism for FQ-OH, but also presents a novel regulated mechanism via atomic electronegativity.

Insights from computational analysis: Excited-state hydrogen-bonding interactions and ESIPT processes in phenothiazine derivatives

Organic materials with Mechanofluorochromism (MFC) properties have potential application value. Phenothiazine derivatives are a class of substances with MFC properties that have been synthesized and reported in experiments (Dyes and Pigments 172 (2020) 107835). Dual fluorescence of a series of phenothiazine derivatives is observed in the experiment, which proved that the ESIPT process is carried out. In this work, we choose phenothiazine derivatives (C2PAHN, C4PAHN, C8PAHN) as models to theoretically analyze the influence of different alkyl chain lengths on the excited state intramolecular proton transfer (ESIPT). In addition, the shift value of fluorescence spectrum is related to the length of alkyl chain. The fluorescence shift of C2PAHN is the largest (6.31 nm), and that of C8PAHN is the smallest (2.40 nm). The theory of density functional theory (DFT) and time-dependent density functional theory (TD-DFT) are adopted to simulate the molecular dynamics in the ground state and excited state. The analysis of the optimized molecular geometry parameters and infrared vibrational spectroscopy (IR) illustrate the stronger hydrogen bonding of the excited state molecules, which is favorable for the progress of ESIPT. Fluorescence spectroscopy reveals that the appropriate increase or decrease of alkyl chains would change the photophysical properties of the molecules. Frontier molecular orbitals (FMOs) indicate that the rearrangement of electron density from electronic level to is the driving force of the ESIPT process. Reduction density gradient (RDG) surfaces and Natural Population Analysis (NPA) tentatively lead to the conclusion that alkyl chain length is inversely proportional to hydrogen bond strength. Finally, the data are qualitatively analyzed by scanning the potential energy curves, and it is concluded that the longer the alkyl chain, the weaker the hydrogen bonding effect and the more unfavorable the ESIPT process.

Quantum Chemical Characterization and Design of Quantum Dots for Sensing Applications

The ability to tune the optoelectronic properties of quantum dots (QDs) makes them ideally suited for the use as fluorescence sensing probes. The vast structural diversity in terms of the composition and size of QDs can make designing a QD for a specific sensing application a challenging process. Quantum chemical calculations have the potential to aid this process through the characterization of the properties of QDs, leading to their in silico design. This is explored in the context of QDs for the fluorescence sensing of dopamine based upon density functional theory and time-dependent density functional theory (TDDFT) calculations. The excited states of hydrogenated carbon, silicon, and germanium QDs are characterized through TDDFT calculations. Analysis of the molecular orbital diagrams for the isolated molecules and calculations of the excited states of the dopamine-functionalized quantum dots establish the possibility of a photoinduced electron-transfer process by determining the relative energies of the electronic states formed from a local excitation on the QD and the lowest QD → dopamine electron-transfer state. The results suggest that the Si₁₆₅H₁₀₀ and Ge₈₄H₆₄ QDs have the potential to act as fluorescent markers that could distinguish between the oxidized and reduced forms of dopamine, where the fluorescence would be quenched for the oxidized form. The work contributes to a better understanding of the optical and electronic behavior of QD-based sensors and illustrates how quantum chemical calculations can be used to inform the design of QDs for specific fluorescent sensing applications.

Fluorescent detection mechanism of CO-releasing molecule-3: Competition of inter-/intra-molecular hydrogen bonds

The fluorescent detection mechanism of 2-(4-nitro-1,3-dioxoisoindolin-2-yl) acetic acid (CORM3-green) on CO-Releasing Molecule-3 (CORM-3) is theoretically studied. Upon reaction with CORM-3, the non-fluorescent CORM3-green is transferred to the keto form of 2-(4-amino-1,3-dioxoisoindolin-2-yl)acetic acid (PTI) to produce strong fluorescence peak located at 423 nm. This peak red-shifts to 489 nm, which is induced by the strengthening of intermolecular hydrogen bond (HB) between PTI and water molecules and attributed to the experimentally observed fluorescence emission at 503 nm. This result is dramatically different from previous reports that the experimental fluorescence corresponds to the proton transferred enol form of PTI. To illustrate this confusion, the calculated fluorescence peak of PTI-Enol is located at 689 nm, which is much larger than that of experimental result. This result excludes the occurrence of excited state intramolecular proton transfer (ESIPT). It is concluded that intermolecular HBs hinders the formation of intramolecular HB and the ESIPT of the keto form of PTI. This conclusion confirms that experimental Stokes shift of 113 nm is mainly caused by the intermolecular hydrogen bonding rather than by ESIPT process. This work proposes a reasonable explanation for the detection mechanism of CORM3-green and experimental fluorescence phenomenon.

Structural, Electronic and NLO Properties of 6-aminoquinoline: A DFT/TD-DFT Study

A computational study based on the DFT/TD-DFT approach was performed to explore various properties of 6-aminoquinoline (6AQ). The geometrical parameters, molecular orbitals (MOs), electronic spectra, electrostatic potential, molecular surface, reactivity parameters and thermodynamic properties of 6AQ were explored. The absorption and emission spectra of 6AQ in solvents have been estimated by TD-DFT coupled with the PCM model and correlated with the available experimental results. Depending on the solvents, the computed absorption maxima of 6AQ were noticed between 327 nm - 340 nm and ascribed to [Formula: see text] transition. The simulated emission maxima were obtained between 389 to 407 nm and ascribed to [Formula: see text] transition. On increasing the solvent polarity, both the emission and absorption maxima showed a bathochromic shift. The LUMO and HOMO were localized on the entire molecule. It was observed that the lowest excited state is possibly the [Formula: see text] charge-transfer (CT) state. The natural bonding orbital (NBO) study points out that ICT plays a significant role in stabilizing the molecular system. Moreover, the NLO (nonlinear optical) properties (polarizability, first-order hyperpolarizability and dipole moment) were computed using different hybrid functionals. The estimated values indicate that 6AQ can be considered a desirable molecule for further studies of the NLO applications.

Substituent effect on ESIPT mechanisms and photophysical properties of HBT derivatives

Substituent effects on excited-state intramolecular proton transfer (ESIPT) and photophysical properties of 2-(2-Hydroxyphenyl) benzothiazole (HBT) derivatives have been theoretically unveiled via the density functional theory (DFT) and time-dependent DFT (TDDFT). The optimized geometrical configurations and normal mode analyses confirm that the proton transfer processes are more reactive in excited state. Through calculating the activation energies and rate constants of ESIPT processes, finding that the processes are increasingly inactive when substituent group changes from -CN, -CO₂Me, -Cl, -Me, -NMe₂ to -NO₂. In addition, the photophysical properties analyses indicate the vertical transition energies are in good agreement with those observed in experiment. Note that all the absorption and emission maxima of enol and keto forms have the significant red-shift. In order to clarify the substituent effect on ESIPT and photophysical properties, we draw the frontier molecular orbitals (FMOs) isosurfaces and calculate the distances of electrons and holes and atomic charges. It follows that the intramolecular charge transfer (ICT) degrees are increasingly enlarged as substituting from -CN, -CO₂Me, -Cl, -Me, -NMe₂ to -NO₂ groups, which not only causes the red-shift of absorption and emission of enol and keto forms, but also affects the charge distribution of proton donor and acceptor, inhibiting the occurrence of ESIPT processes.

Modeling solvation effects on absorption and fluorescence spectra of indole in aqueous solution

Modeling the optical spectra of molecules in solution presents a challenge, so it is important to understand which of the solvation effects (i.e., electrostatics, mutual polarization, and hydrogen bonding interactions between solute and solvent molecules) are crucial in reproducing the various features of the absorption and fluorescence spectra and to identify a sufficient theoretical model that accurately captures these effects with minimal computational cost. In this study, we use various implicit and explicit solvation models, such as molecular dynamics coupled with non-polarizable and polarizable force fields, as well as Car-Parrinello molecular dynamics, to model the absorption and fluorescence spectra of indole in aqueous solution. The excited states are computed using the equation of motion coupled cluster with single and double excitations combined with the effective fragment potential to represent water molecules, which we found to be a computationally efficient approach for modeling large solute-solvent clusters at a high level of quantum theory. We find that modeling mutual polarization, compared to other solvation effects, is a dominating factor for accurately reproducing the position of the peaks and spectral line shape of the absorption spectrum of indole in solution. We present an in-depth analysis of the influence that different solvation models have on the electronic excited states responsible for the features of the absorption spectra. Modeling fluorescence is more challenging since it is hard to reproduce even the correct emitting state, and force field parameters need to be re-evaluated.

Investigating the Nonradiative Decay Pathway in the Excited State of Silepin Derivatives: A Study with Second-Order Multireference Perturbation Wavefunction Theory

The fluorescence quantum yield for fluorescent organic molecules is an important molecular property, and tuning it up is desired for various applications. For the computational estimation of the fluorescence quantum yield, the theoretical prediction of the nonradiative decay rate constant has become an attractive subject of study. The rate constant of thermally activated nonradiative decay is related to the activation energy in the photoreaction; thus, the accuracy and reliability of the excited-state potential energies in the quantum chemical computation are critical. In this study, we employed a second-order multireference perturbation wavefunction theory for studying the thermally activated decay via conical intersection (CI) of 1,1-dimethyldibenzo[b,f]silepin derivatives. The correlation between the computed activation energy to reach the CI geometry in the S₁ state and the experimentally determined fluorescence quantum yield implied that silepins nonradiatively decay via the CI triggered by the twisting of the central C-C bond. Geometry optimization of the transition state using multireference perturbation theory drastically reduced the estimated activation energy. Our computation gave reasonable predictions of the activation free energies of photoexcited 1,1-dimethyldibenzo[b,f]silepin. The energy profiles and geometry optimizations using proper quantum chemical methods played a critical role in reliable estimation of the rate constant and fluorescence quantum yield.

An Excited State Intramolecular Proton Transfer-Based Fluorescent Probe with a Large Stokes Shift for the Turn-on Detection of Cysteine: A Detailed Theoretical Exploration

DFT and TDDFT calculations are adopted to study the sensing mechanism of a turn-on-type cysteine fluorescent probe (2-(1-phenyl-imidazo[1,5-α]pyridine-3-yl)phenyl acrylate, denoted as MZC-AC). The photoinduced electron transfer (PET) process of MZC-AC and the excited state intramolecular proton transfer (ESIPT) process of MZC have been investigated in detail. We demonstrate that the fluorescence quenching of MZC-AC is ascribed to the PET mechanism and the large Stokes shift fluorescence emission of MZC is the result of the ESIPT mechanism. The results have been cross-validated by geometries, frontier molecular orbital analysis, and potential energy curve scanning. As a result, our calculations completely reproduce the experimental results and give powerful evidence for the sensing mechanism of MZC-AC for cysteine.

TDDFT study on the photophysical properties of coumarinyl chalcones and sensing mechanism of a derived fluorescent probe for hydrogen sulfide

Coumarin-chalcone hybrids have attracted much attention in recent years due to their important optical properties. Herein, the photophysical properties of a series of coumarinyl chalcones and the sensing mechanism for H₂S of a related fluorescent probe CC-DNP were investigated using density functional theory (DFT) and time-dependent density functional theory (TDDFT) methods. The predicted spectral properties agree well with the experimental results, which allowed an assignment of the spectra. Our calculations successfully clarified the experimental observed fluorescence "off-on" effect and the fluorescent quenching mechanism of the probe. The results revealed that the first excited state (S₁) of the probe CC-DNP is a dark state with obvious charge transfer from coumarin unit to 2,4-dinitrophenyl (DNP) moiety, which results in the fluorescence quenching via the nonradiative photoinduced electron transfer (PET) process. On the other hand, the excited state S₁ in the thiolysis product CC-OH decayed directly to S₀, and thus the fluorescence is recovered.

Sensing mechanism of a fluorescent probe for thiophenols: Invalidity of excited-state intramolecular proton transfer mechanism

Simple and effective detection of thiophenols has attracted great attention. A fluorescent probe 1 with high selectivity and sensitivity is designed and synthesized based on the excited-state intramolecular proton transfer (ESIPT) in experiment. However, we conclude that the ESIPT process fails to happen actually based on the calculation results. In the present work, the density functional theory (DFT) and time-dependent density functional theory (TD-DFT) methods are employed to investigate the real sensing mechanism. The calculated absorption and emission spectra agree well with the experimental results. By comparing the energy of enol and keto configurations and the constructed potential energy surfaces (PESs) in the ground (S₀) and excited (S₁) states of 3-(benzo[d]thiazol-2-yl)-10-butyl-10H-phenothiazin-2-ol (dye 2), the ESIPT process is confirmed impossible because of the relatively high keto form energy and potential energy barrier. Besides, the transition state of dye 2 is optimized to offer the accurate potential energy barrier. The results of calculated frontier molecular orbitals (FMOs) and spectra indicate that it is the photoinduced electron transfer (PET) process that results in the fluorescence quenching of probe 1. After adding thiophenols, the thiolysis of 2,4-dinitrophenyl ether bond is triggered and dye 2, which emits strong fluorescence because of the absence of PET process, is obtained. Consequently, our study has demonstrated that probe 1 can act as a fluorescent probe to detect thiophenols through the off-on fluorescence variation based on the PET mechanism but not the ESIPT process.

Theoretical insights into excited-state hydrogen bonding effects and intramolecular proton transfer (ESIPT) mechanism for BTS system

In this work, N,N'-bis(salicylidene)-(2-(3',4'-diaminophenyl)benzothiazole) (named as "BTS") system was studied about its excited-state intramolecular proton transfer (ESIPT) process. The analyses about reduced density gradient (RDG) reveal the formation of two intramolecular hydrogen bonds in BTS system. Bond lengths and angles, infrared (IR) vibrations as well as frontier molecular orbitals (MOs) using TDDFT method indicate that the strength of hydrogen bond should be enhanced in the S1 state. Particularly, hydrogen bond O1-H2···N3 undergoes larger variations compared with O4-H5···N6, which infers that hydrogen bond O1-H2···N3 may play a decisive role in the ESIPT process of BTS system. Given the two hydrogen bonds of BTS molecule, two types of potential energy curves have been constructed, which confirms that only single proton transfer process occurs due to lower energy barrier along with O1-H2···N3 rather than O4-H5···N6. This work not only presents a reasonable explanation for previous experiment, but also clarifies the specific ESIPT mechanism for BTS system.

Development of Human Serum Albumin Selective Fluorescent Probe Using Thieno[3,2-b]pyridine-5(4H)-one Fluorophore Derivatives

The level of human serum albumin (HSA) in biological fluids is a key health indicator and its quantitative determination has great clinical importance. In this study, we developed a selective and sensitive fluorescent HSA probe by fluorescence-based high-throughput screening of a set of fluorescent thieno[3,2-b]pyridine-5(4H)-one derivatives against major plasma proteins: HSA, bovine serum albumin (BSA), globulin, fibrinogen, and transferrin. The fluorophore chosen finally (4) showed noticeable fluorescence enhancement in the presence of HSA (160-fold increase), and it exhibited rapid response, high sensitivity (detection limit 8 nM), and the ability to clearly distinguish HSA from BSA in pH 9 buffer condition. Moreover, the probe could be applicable to detect trace amounts of HSA in an artificial urine sample; further, it might be applied to the determination of the HSA concentration in complex biological samples for pre-clinical diagnosis.