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Ahmed M, Malhotra SS, Yadav O, Monika, Saini C, Sharma N, Gupta MK, Mohapatra RK, Ansari A. DFT and TDDFT exploration on electronic transitions and bonding aspect of DPA and PTDC ligated transition metal complexes. J Mol Model 2024; 30:122. [PMID: 38570356 DOI: 10.1007/s00894-024-05912-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Accepted: 03/22/2024] [Indexed: 04/05/2024]
Abstract
CONTEXT In this study, we have investigated the structure, reactivity, bonding, and electronic transitions of DPA and PDTC along with their Ni-Zn complexes using DFT/TD-DFT methods. The energy gap between the frontier orbitals was computed to understand the reactivity pattern of the ligands and metal complexes. From the energies of FMO's, the global reactivity descriptors such as electron affinity, ionization potential, hardness (η), softness (S), chemical potential (μ), electronegativity (χ), and electrophilicity index (ω) have been calculated. The complexes show a strong NLO properties due to easily polarization as indicated by the narrow HOMO-LUMO gap. The polarizability and hyperpolarizabilities of the complexes indicate that they are good candidates for NLO materials. Molecular electrostatic potential (MEP) maps identified electrophilic and nucleophilic sites on the surfaces of the complexes. TDDFT and NBO analyses provided insights into electronic transitions, bonding, and stabilizing interactions within the studied complexes. DPA and PDTC exhibited larger HOMO-LUMO gaps and more negative electrostatic potentials compared to their metal complexes suggesting the higher reactivity. Ligands (DPA and PDTC) had absorption spectra in the range of 250 nm to 285 nm while their complexes spanned 250 nm to 870 nm. These bands offer valuable information on electronic transitions, charge transfer and optical behavior. This work enhances our understanding of the electronic structure and optical properties of these complexes. METHODS Gaussian16 program was used for the optimization of all the compounds. B3LYP functional in combination with basis sets, such as LanL2DZ for Zn, Ni and Cu while 6-311G** for other atoms like C, H, O, N, and S was used. Natural bond orbital (NBO) analysis is carried out to find out how the filled orbital of one sub-system interacts with the empty orbital of another sub-system. The ORCA software is used for computing spectral features along with the zeroth order regular approximation method (ZORA) to observe its relativistic effects. TD-DFT study is carried out to calculate the excitation energy by using B3LYP functional.
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Affiliation(s)
- Mukhtar Ahmed
- Department of Chemistry, Central University of Haryana, Mahendergarh, 123031, India
| | - Sumit Sahil Malhotra
- Department of Chemistry, Central University of Haryana, Mahendergarh, 123031, India
| | - Oval Yadav
- Department of Chemistry, Central University of Haryana, Mahendergarh, 123031, India
| | - Monika
- Department of Chemistry, Central University of Haryana, Mahendergarh, 123031, India
| | - Charu Saini
- Department of Chemistry, Central University of Haryana, Mahendergarh, 123031, India
| | - Neha Sharma
- Life Science, Dyal Singh College, University of Delhi, Delhi, 110003, India
| | - Manoj Kumar Gupta
- Department of Chemistry, Central University of Haryana, Mahendergarh, 123031, India
| | - Ranjan Kumar Mohapatra
- Department of Chemistry, Government College of Engineering, Keonjhar, Odisha, 758002, India
| | - Azaj Ansari
- Department of Chemistry, Central University of Haryana, Mahendergarh, 123031, India.
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Alam N, Islam M, Najnin H, Shakya S, Khan IM, Hossain MW, Zaidi R. Design and characterization of a binary CT complex of imidazole-oxyresveratrol: exploring its pharmacological and computational aspects. J Biomol Struct Dyn 2024; 42:1319-1335. [PMID: 37054451 DOI: 10.1080/07391102.2023.2199088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Accepted: 03/30/2023] [Indexed: 04/15/2023]
Abstract
A new binary charge transfer (CT) complex between imidazole (IMZ) and oxyresveratrol (OXA) was synthesized and characterized experimentally and theoretically. The experimental work was carried out in solution and solid state in selected solvents such as chloroform (CHL), methanol (Me-OH), ethanol (Et-OH), and acetonitrile (AN). The newly synthesized CT complex (D1) has been characterized by various techniques such as UV-visible spectroscopy, FTIR, 1H-NMR, and powder-XRD. The 1:1 composition of D1 is confirmed by Jobs' method of continuous variation and spectrophotometric (at λmax 554 nm) methods at 298 K. The infrared spectra of D1 confirmed the existence of proton transfer hydrogen bond beside charge transfer interaction. These findings indicate that the cation and anion are joined together by the weak hydrogen bonding as N+-H-O-. Reactivity parameters strongly recommended that IMZ behaves as a good electron donor and OXA an efficient electron acceptor. Density functional theory (DFT) computations with basis set B3LYP/6-31G (d,p) was applied to support the experimental results. TD-DFT calculations gives HOMO (-5.12 eV) → LUMO (-1.14 eV) electronic energy gap (Δ E ) to be 3.80 eV. The bioorganic chemistry of D1 was well established after antioxidant, antimicrobial, and toxicity screening in Wistar rat. The type of interactions between HSA and D1 at the molecular level was studied through fluorescence spectroscopy. Binding constant along with the type of quenching mechanism, was investigated through the Stern-Volmer equation. Molecular docking demonstrated that D1 binds perfectly with human serum albumin and EGFR (1M17) and exposes free energy of binding (FEB) values of -295.2 and -283.3 kcal/mol, respectively. The D1 fits successfully into the minor groove of HAS and 1M17, the results of molecular docking show that the D1 binds perfectly with the HAS and 1M17, the higher value of binding energy shows stronger interaction between HAS and 1M17 with D1. Our synthesized complex shows good binding results with HAS compared to 1M17.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Nisat Alam
- Department of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, India
| | - Maidul Islam
- Deparment of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh, India
| | - Hasina Najnin
- Department of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, India
| | - Sonam Shakya
- Deparment of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh, India
| | - Ishaat M Khan
- Deparment of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh, India
| | | | - Rana Zaidi
- Department of Biochemistry, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, India
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Noudem P, Fouejio D, Mveme CDD, Nya FT, Zekeng SS. Electronic, nonlinear optical, UV-vis and NBO analysis of methyl methacrylate for optoelectronic and optical applications: DFT study and impact of conformation. Spectrochim Acta A Mol Biomol Spectrosc 2023; 303:123267. [PMID: 37598450 DOI: 10.1016/j.saa.2023.123267] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 07/24/2023] [Accepted: 08/15/2023] [Indexed: 08/22/2023]
Abstract
Using Density Functional Theory (DFT) and time-dependent DFT (TD-DFT), we studied a compound widely used in daily life, namely: Methyl Methacrylate (MMA) monomer in its two stable isomers, cis-MMA and trans-MMA. The impact of conformation on the optical and electronic properties of MMA was highlighted. Structural parameters and thermodynamic properties were also assessed, and allowed to discuss the stability and reactivity of this compound. In addition, analysis of optoelectronic and electronic properties, global reactivity descriptors, natural bond orbital (NBO), and hole and electron reorganization energies was performed. The absorption and fluorescence properties, as well as the linear and nonlinear optical (NLO) properties of MMA were also investigated. The findings show that MMA is an insulator due to its wide band gap of 6.20 eV. It also exhibits good optoelectronic properties with high average electric field values of about 5.90 × 109 Vm-1 for cis-MMA and 5.42 × 109 Vm-1 for trans-MMA and high electric displacement values of at least 14.65 × 10-2 cm-2 for cis-MMA and 14.33 × 10-2 cm-2 for trans-MMA, suggesting a potential use for the design of piezoelectric and pyroelectric materials. In addition, trans-MMA has a dielectric constant close to that of good insulators; while cis-MMA exhibits a dielectric behaviour close to that of polymeric substances. Further, these materials are thermodynamically stable in its two conformations, with a good reactivity which can lead to good ability of polymerization. The analysis of the UV-vis spectra revealed that both forms of MMA absorb and emit mainly in the UV and that the Stokes shift of MMA is low, reducing its potential use in devices such as solar cells. At NLO level, MMA isomers exhibit weak optical properties such as second- and third-order optical susceptibility and cannot suitable for second and third harmonic generation; however, the conformation enhances second-order NLO response by at least 2 times when moving from cis- to trans-MMA, whereas the third-order response is almost unaffected. In addition, the conformation also affects the electronic and optoelectronic properties of MMA.
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Affiliation(s)
- P Noudem
- Mechanic, Materials and complex structures Laboratory, Department of Physics, Faculty of Science, University of Yaoundé I, P.O. Box 812, Yaoundé, Cameroon
| | - D Fouejio
- Mechanic, Materials and complex structures Laboratory, Department of Physics, Faculty of Science, University of Yaoundé I, P.O. Box 812, Yaoundé, Cameroon.
| | - C D D Mveme
- Materials Science Laboratory, Department of Physics, Faculty of Science, University of Maroua, P.O. Box 814, Maroua, Cameroon
| | - F Tchangnwa Nya
- Materials Science Laboratory, Department of Physics, Faculty of Science, University of Maroua, P.O. Box 814, Maroua, Cameroon
| | - S S Zekeng
- Mechanic, Materials and complex structures Laboratory, Department of Physics, Faculty of Science, University of Yaoundé I, P.O. Box 812, Yaoundé, Cameroon
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Islam M, Khan IM, Shakya S, Alam N. Design, synthesis, characterizing and DFT calculations of a binary CT complex co-crystal of bioactive moieties in different polar solvents to investigate its pharmacological activity. J Biomol Struct Dyn 2023; 41:10813-10829. [PMID: 36579428 DOI: 10.1080/07391102.2022.2158937] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Accepted: 12/10/2022] [Indexed: 12/30/2022]
Abstract
Imidazole (IM) and salicylic acid (SA) have a significant class among the medical compound. These are widely used as topical drugs like antifungal, antibacterial, anticancer, immunosuppressive agent, etc. These two bioactive organic moieties are combined by a weak hydrogen bond formed by hydrogen transfer. The charge transfer (CT) complex of acceptor (SA) and donor (IM), has been synthesized at room temperature in methanol and confirmed by signal-crystal XRD, conductance and UV-visible spectroscopy. The X-ray crystallography provides the original structural information of CT complex and displays the existence of N+-H--O- bond between IM and SA. The physical properties such as (ECT), (RN), (ID), (f), (D) and (Δ G0) along with molar extinction coefficient (εCT) and formation constant (KCT) were estimated through UV-visible spectroscopy. Job's method and Benesi-Hildebrand equation suggested 1:1 stoichiometry of ([IM]+[SA]-). The results indicate a complete transfer of hydrogen atom and CT complex formation with 1:1 molar ratio of IM and SA. Antimicrobial activity was veiled against different bacteria like Escherichia coli, Bacillus subtilis and Staphylococcus aureus; and different fungi as Fusarium oxysporum, Candida albicans and Aspergillus niger by disc diffusion method. CT complex was also tested for cytotoxic activity against lung cancer cell lines in comparison to breast cancer cell lines. Molecular docking provides the information of binding of [(IM)+(SA)-] with the cancer marker (1M17), which has substantial application for drug designing. The investigational studies were supplemented through time-dependent density functional theory (TD-DFT) using basis set B3LYP/6-311G**. Through DFT calculations, HOMO→LUMO electronic energy gap (Δ E ) was obtained.
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Affiliation(s)
- Maidul Islam
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh, India
| | - Ishaat M Khan
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh, India
| | - Sonam Shakya
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh, India
| | - Nisat Alam
- Department of Bio-chemistry, School of Chemical and Life Science, New Delhi, India
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Mulla BBA, Nesaragi AR, M MPK, Kamble RR, Sidarai AH. Exploration of Coumarin Derivative: Experimental and Computational Modeling for Dipole Moment Estimation and Thermal Sensing Application. J Fluoresc 2023:10.1007/s10895-023-03364-3. [PMID: 37597135 DOI: 10.1007/s10895-023-03364-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2023] [Accepted: 07/19/2023] [Indexed: 08/21/2023]
Abstract
The Optical properties of the FBTC (1-((4-((5-chlorobenzo[d]oxazol-2-ylthio)methyl)-1H-1,2,3-triazol-1-yl)methyl)-3H-benzo[f]chromen-3-one) molecule were studied experimentally and theoretically. The spectra of absorption and fluorescence were recorded in various solvents to explore their Solvatochromic behavior and dipole moment at room temperature. To determine the ground and excited state of dipole moment experimentally and theoretically, we employed different Solvatochromic techniques, including microscopic solvent polarity functions developed by Lippert, Bakhshiev, Kawaski-Chamma-Viallet, and Reichardt's, as well as density functional theory (DFT) and time-dependent density functional theory (TD-DFT) methods. The stability of the excited state dipole moment in FBTC is higher. Using prime functional, FBTC was optimized in its ground state, and its HOMO (Highest Occupied Molecular Orbital) and LUMO (Lowest Unoccupied Molecular Orbital), energies were estimated. These values were then compared with those obtained through cyclic voltammetry. Based on the HOMO and LUMO values given, we calculated the global reactivity parameter and energy gap, which was found to be low at 3.77 eV. This study also includes an estimation of electron absorption energies and oscillator strength. Natural population analysis (NPA), Milliken atomic charge, and molecular electrostatic potential (MESP) map are correlated. In addition, FBTC exhibited exceptional physiological temperature sensing behaviour from 20 °C -65 °C with high relative sensitivity and firm stability. Hence these results confirm that FBTC is a potential candidate for photonic devices and it's also applicable in optical temperature sensing.
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Affiliation(s)
- Bi Bi Ayisha Mulla
- Department of Studies in Physics, Karnatak University, Dharwad, 580003, Karnataka, India
| | - Aravind R Nesaragi
- Centre for Nano and Material Science, Jain (Deemed-to-Be University), Jain Global Campus, Kanakapura, Bangalore, 562112, Karnatak, India
| | - Mussuvir Pasha K M
- Vijayanagara Sri Krishna Devaraya University, Bellary, 583105, Karnataka, India
| | - Ravindra R Kamble
- Department of Chemistry, Karnatak University, Dharwad, 580003, Karnataka, India
| | - Ashok H Sidarai
- Department of Studies in Physics, Karnatak University, Dharwad, 580003, Karnataka, India.
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Patil SA, Budri MB, Inamdar SR, Gudasi KB. Effect of Hydroxyl Group on Photo-Physical Properties and Dipole Moments of Fluorescent Dyes: An Experimental and Computational Approach. J Fluoresc 2022; 33:1041-1056. [PMID: 36565412 DOI: 10.1007/s10895-022-03105-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 11/28/2022] [Indexed: 12/25/2022]
Abstract
In this work, structurally similar, (E)-N'-(2-hydroxybenzylidene)-3,5-di-tert-butyl-2-hydroxybenzohydrazide (A) and (E)-N'-(2-4-dihydroxybenzylidene)-3,5-di-tert-butyl-2-hydroxybenzohydrazide (A-OH) dyes dissolved in general solvents have been studied to explore photo-physical properties, employing solvatochromic shift method, thereby determining their dipole moments in the ground (μg) and excited (μe) states. The molecule A shows a bathochromic shift of fluorescence emission maxima in aprotic solvents whereas a hypsochromic shift in protic solvents. Interestingly, A-OH follows a hypsochromic shift in both protic and aprotic solvents with increasing solvent polarity. The effect of hydroxyl substituent on UV-Visible absorption, fluorescence emission, and dipole moment of the titled organic molecules was explained. Theoretical methods such as Bilot-Kawski method for determination of μg and μe and Bakshiev, Kawski-Chamma-Viallet, Lippert-Mataga equations for μe, and Reichardt method for the difference between μg and μe were employed. It is observed that μe is higher than that of μg for both the molecules, and interestingly, upon substituting an additional hydroxyl group the value of μg has increased while μe is decreased. The DFT calculations have been performed to support experimental results by employing DFT/B3LYP/6-311G + (d) and TD-DFT/B3LYP/6-311G + (d) method using Gaussian09 software. The electrophilic and nucleophilic sites on the molecules were studied with the help of MEP. The NBO analysis results show that the interaction N24 (σ) → C22-O23 (π*) is found to be stronger in both the molecules with energy 68.90 kJ/mol and the effect of hydroxyl group is also discussed on the basis of HOMO and LUMO.
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Affiliation(s)
- Shivaraj A Patil
- Laser Spectroscopy (DRDO/KU) Programme, Department of Physics, Karnatak University, Dharwad, 580003, India
| | - Mahantesh B Budri
- Department of Chemistry, Karnatak University, Dharwad, 580003, India
| | - Sanjeev R Inamdar
- Laser Spectroscopy (DRDO/KU) Programme, Department of Physics, Karnatak University, Dharwad, 580003, India.
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Hassan AU, Mohyuddin A, Nadeem S, Güleryüz C, Hassan SU, Javed M, Muhsan MS. Structural and Electronic (Absorption and Fluorescence) Properties of a Stable Triplet Diphenylcarbene: A DFT Study. J Fluoresc 2022; 32:1629-38. [PMID: 35596854 DOI: 10.1007/s10895-022-02969-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 05/05/2022] [Indexed: 10/18/2022]
Abstract
A triplet diphenylcarbene, bis[3-bromo-5-(trifluoromethyl)[1,1'-biphenyl]-4-yl]methylidene (B3B), with exceptional stability was discovered by chemists from Japan's Mie University. To investigate its different quantum chemical features, a theoretical analysis was predicated on Density Functional Theory (DFT) and Time Dependent-DFT (TD-DFT) based technique. According to the findings, the singlet-triplet energy gap (ES-T), as well as HOMO-LUMO energy bandgap (EH-L), was found to be diminished when nucleophilicity (N) rose. We looked at the geometrical dimensions, molecular orbitals (MOs), electronic spectra, electrostatic potential, molecular surfaces, reactivity characteristics, and thermodynamics features of the title carbene (B3B). Its electronic spectra in different solvents were calculated using TD-DFT and Polarizable Continuum Model (PCM) framework. The estimated absorption maxima of B3B were seen between 327 and 340 nm, relying on the solvents, and were attributed to the S0 → S1 transition. Estimated fluorescence spectral peaks were found around 389 and 407 nm with the S1 and S0 transitions being identified. Its fluorescence/absorption intensities revealed a blue shift change when the solvent polarity was increased. The least exciting state has been discovered to be the π → π* charge-transfer (CT) phase. According to the Natural Bonding Orbital (NBO) exploration, ICT offers a significant role in chemical system destabilization. Furthermore, several hybrid features were used to determine the NLO (nonlinear optical) features (polarizability, first-order hyperpolarizability, and dipole moment). The calculated values suggest that B3B is a promising candidate for further research into nonlinear optical properties.
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Fonseca S, Santos L, Pereira R, Modesto-Costa L, da Cunha AR, Siqueira MRS, Carvalho FAO, Andrade-Filho T, Gester R. A DFT analysis of electronic, reactivity, and NLO responses of a reactive orange dye: the role of Hartree-Fock exchange corrections. J Mol Model 2022; 28:85. [PMID: 35377023 DOI: 10.1007/s00894-022-05035-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Accepted: 01/19/2022] [Indexed: 10/18/2022]
Abstract
An experimental and theoretical study based on DFT/TD-DFT approximations is presented to understand the nature of electronic excitations, reactivity, and nonlinear optical (NLO) properties of reactive orange 16 dye (RO16), an azo chromophore widely used in textile and pharmacological industries. The results show that the solvent has a considerable influence on the electronic properties of the material. According to experimental results, the absorption spectrum is formed by four intense transitions, which have been identified as [Formula: see text] states using TD-DFT calculations. However, the TD-DFT results reveal a weak [Formula: see text] in the low-lying spectral region. Continuum models of solvation indicate that these states suffer from bathochromic (ca. 15 nm) and hypsochromic shifts (ca. 4 nm), respectively. However, the expected blue shift for the absorption [Formula: see text] is only described using long-range or dispersion-corrected DFT methods. RO16 is classified as a strong electrophilic system, with electrophilicity ω > 1.5 eV. Concerning the nucleophilicity parameter (N), from vacuum to solvent, the environment is active and changes the nucleophilic status from strong to moderate nucleophile (2.0 ≤ N ≤ 3.0 eV). The results also suggest that all electrical constants are strongly dependent on long-range and Hartree-Fock exchange contributions, and the absence of these interactions gives results far from reality. In particular, the results for the NLO response show that the chromophore presents a potential application in this field with a low refractive index and first hyperpolarizability ca. 214 times bigger than the value usually reported for urea (β = 0.34 × 10- 30 esu), which is a standard NLO material. Concerning the solvent effects, the results indicate that the polarizability increases [Formula: see text] esu from gas to solvent while the first hyperpolarizability is calculated as [Formula: see text] esu, ca. 180%, regarding the vacuum. The results suggest RO16 is a potential compound in NLO applications. Graphical Abstract The frontier molecular orbitals, and the inverse relation between the energy-gap (Egap) and the first hyperpolarizability (β).
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Kediya S, Manhas A, Lone MY, Jha PC. DFT/TD-DFT study to decipher the fluoride induced ring opening process of spiropyran. J Mol Graph Model 2021; 110:108049. [PMID: 34673352 DOI: 10.1016/j.jmgm.2021.108049] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Revised: 09/19/2021] [Accepted: 10/08/2021] [Indexed: 11/26/2022]
Abstract
DFT/TD-DFT methods were used to determine the fluoride anion sensing mechanism of 3',6'-Bis(tert-butyldimethylsilyloxy)spiro[benzo[f]chromene3,9'ffuorene], abbreviated as SP. The description of ring opening in the ground state of SP molecule and its isomerization in open form is presented. It was revealed from the study that in the ground state, SP is the most stable form in contrast with the isomer obtained in the open form. To initiate the ring opening, at first, the fluoride ion attacks as a nucleophile to de-silylate the SP molecule. This attack of fluoride ion may induce Cspiro-O bond cleavage leading to the formation of two anionic species, i.e., MC-D1 and MC-D2 respectively (MC is merocyanin). The mono-de-silylation process was endogenic, which was followed by the ring opening process. Furthermore, the orthogonal geometry of probe SP does not show ICT character, whereas, MC-D1 and MC-D2 displayed ICT character owing to the formation of planar geometry along with an increase in conjugation. The fluorescence property of SP, and most stable isomers of open form (CT, MC-D1, and MC-D2) were predicted theoretically. The calculated emission spectra uncovered that SP may show fluorescence, which could be quenched in presence of fluoride anion.
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Affiliation(s)
- Siddhiben Kediya
- School of Applied Material Sciences, Central University of Gujarat, Gandhinagar, 382030, India
| | - Anu Manhas
- Department of Chemistry, Pandit Deendayal Energy University (former PDPU), Gandhinagar, 382426, Gujarat, India
| | - Mohsin Y Lone
- Dept. of Chemistry, Indian Institute of Technology Gandhinagar, Gujarat, 382355, India
| | - Prakash C Jha
- School of Applied Material Sciences, Central University of Gujarat, Gandhinagar, 382030, India.
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Pandey N, Mehata MS, Pant S, Tewari N. Structural, Electronic and NLO Properties of 6-aminoquinoline: A DFT/TD-DFT Study. J Fluoresc 2021; 31:1719-29. [PMID: 34427839 DOI: 10.1007/s10895-021-02788-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 07/13/2021] [Indexed: 10/20/2022]
Abstract
A computational study based on the DFT/TD-DFT approach was performed to explore various properties of 6-aminoquinoline (6AQ). The geometrical parameters, molecular orbitals (MOs), electronic spectra, electrostatic potential, molecular surface, reactivity parameters and thermodynamic properties of 6AQ were explored. The absorption and emission spectra of 6AQ in solvents have been estimated by TD-DFT coupled with the PCM model and correlated with the available experimental results. Depending on the solvents, the computed absorption maxima of 6AQ were noticed between 327 nm - 340 nm and ascribed to [Formula: see text] transition. The simulated emission maxima were obtained between 389 to 407 nm and ascribed to [Formula: see text] transition. On increasing the solvent polarity, both the emission and absorption maxima showed a bathochromic shift. The LUMO and HOMO were localized on the entire molecule. It was observed that the lowest excited state is possibly the [Formula: see text] charge-transfer (CT) state. The natural bonding orbital (NBO) study points out that ICT plays a significant role in stabilizing the molecular system. Moreover, the NLO (nonlinear optical) properties (polarizability, first-order hyperpolarizability and dipole moment) were computed using different hybrid functionals. The estimated values indicate that 6AQ can be considered a desirable molecule for further studies of the NLO applications.
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Bourouina A, Rekis M. Comparison in optoelectronic properties of triphenylamine-imidazole or imidazole as donor for dye-sensitized solar cell: theoretical approach. J Mol Model 2021; 27:225. [PMID: 34258662 DOI: 10.1007/s00894-021-04844-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Accepted: 07/05/2021] [Indexed: 10/20/2022]
Abstract
In the present work, the structural and electronic properties of the D-D'-π-A organic dye with two donors have been calculated theoretically by DFT/time-dependent DFT method. In order to prove their efficiency as sensitizers, a comparative study was performed with a series of D-π-A architecture with one donor. The results of light-harvesting efficiency (LHE), open circuit voltage (Voc), free energy injection (∆Ginj), free energy dye regeneration∆Greg,excited-state lifetimes for the two series reveal that the D-D'-π-A dyes are promising for the design of new sensitive dyes in solar cells.
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Affiliation(s)
- Assia Bourouina
- Theoretical Chemistry and Computational Photonics Laboratory, Faculty of Chemistry, Houari Boumediene Sciences and Technology University, BP 32 El Alia, 16111, Algiers, Algeria.
| | - Mâammar Rekis
- Theoretical Chemistry and Computational Photonics Laboratory, Faculty of Chemistry, Houari Boumediene Sciences and Technology University, BP 32 El Alia, 16111, Algiers, Algeria
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Bani-Yaseen AD. Computational Study on the Mechanism of the Photouncaging Reaction of Vemurafenib: Toward an Enhanced Photoprotection Approach for Photosensitive Drugs. Molecules 2021; 26:1846. [PMID: 33806033 DOI: 10.3390/molecules26071846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2020] [Revised: 09/21/2020] [Accepted: 10/01/2020] [Indexed: 11/17/2022] Open
Abstract
The photochemical behavior of the photosensitive first-line anticancer drug vemurafenib (VFB) is of great interest due to the impact of such behavior on its pharmacological activity. In this work, we computationally elucidated the mechanism of the photoinduced release of VFB from the 4,5-dimethoxy-2-nitrobenzene (DMNB) photoprotecting group by employing various density functional theory (DFT)/time-dependent DFT (TD-DFT) approaches. The computational investigations included a comparative assessment of the influence of the position of the photoprotecting group as a substituent on the thermodynamics and kinetics of the photouncaging reactions of two VFB-DMNB prodrugs, namely pyrrole (NP) and sulfonamide (NS). With the aid of the DFT calculations concerning the activation energy barrier (∆G‡), the obtained results suggest that the step of the photoinduced intramolecular proton transfer of the DMNB moiety is not detrimental concerning the overall reaction profile of the photouncaging reaction of both prodrugs. However, the obtained results suggested that the position of the substitution position of the DMNB photoprotecting group within the prodrug structure has a substantial impact on the photouncaging reaction. In particular, the DMNB-Ns-VFB prodrug exhibited a notable increase in ∆G‡ for the key step of ring opining within the DMNB moiety indicative of potentially hindered kinetics of the photouncaging process compared with DMNB-Np-VFB. Such an increase in ∆G‡ may be attributed to the electronic influence of the NP fragment of the prodrug. The results reported herein elaborate on the mechanism of the photoinduced release of an important anticancer drug from photoprotecting groups with the aim of enhancing our understanding of the photochemical behavior of such photosensitive pharmaceutical materials at the molecular level.
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Husain S, Mehata MS, Pandey N, Mishra H, Pant S. Reinvestigation of the photophysics of 3-aminobenzoic acid in neat and mixed binary solvents. Spectrochim Acta A Mol Biomol Spectrosc 2021; 247:119100. [PMID: 33212332 DOI: 10.1016/j.saa.2020.119100] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 10/10/2020] [Accepted: 10/13/2020] [Indexed: 06/11/2023]
Abstract
The present study elucidates the reinvestigation of the photophysical behavior of 3-aminobenzoic acid (3ABA) in solvents of different polarities using the steady-state spectroscopic techniques. Kamlet-Taft and Catalan solvatochromic models have been used to analyze the solvatochromic changes in neat solvents. The hydrogen bond donating ability of the solvent was found to be the main parameter affecting the spectral behavior of 3ABA. The solvatochromic characteristics of 3ABA have also been examined in binary solvent mixtures viz. acetonitrile (ACN)-methanol (MeOH) and benzene (BEN)-MeOH using the concept of preferential solvation. The preferential solvation of 3ABA shows unusual behavior for BEN-MeOH binary mixture and described unnoticed sigmoidal behavior in the ground state and synergistic impact in the excited state. Besides, the 3ABA was studied theoretically by quantum chemical calculations using (HF) Hartree-Fock and (DFT/B3LYP) density functional theories and its electronic absorption bands have been assigned by time-dependent density functional theory (TD-DFT). The effect of solvents on 3ABA was considered using a IEF-PCM-TDDFT (integral equation formalism of the polarizable continuum model- TDDFT) method. Thus, the theoretical results were found to be closer to the experimental results.
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Affiliation(s)
- Shahid Husain
- Photophysics Laboratory, Department of Physics, Centre of Advanced Study, DSB Campus, Kumaun University, Nainital 263002, India
| | - Mohan Singh Mehata
- Laser Spectroscopy Laboratory, Department of Applied Physics, Delhi Technological University, Bawana Road, Delhi 110042, India.
| | - Nupur Pandey
- Photophysics Laboratory, Department of Physics, Centre of Advanced Study, DSB Campus, Kumaun University, Nainital 263002, India
| | - Hirdyesh Mishra
- Physics Section, M.M.V., Banaras Hindu University (B.H.U.), Varanasi 221005, India
| | - Sanjay Pant
- Photophysics Laboratory, Department of Physics, Centre of Advanced Study, DSB Campus, Kumaun University, Nainital 263002, India
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Khan IM, Islam M, Shakya S, Alam K, Alam N, Shahid M. Synthesis, characterization, antimicrobial and DNA binding properties of an organic charge transfer complex obtained from pyrazole and chloranilic acid. Bioorg Chem 2020; 99:103779. [PMID: 32240872 DOI: 10.1016/j.bioorg.2020.103779] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Revised: 03/03/2020] [Accepted: 03/19/2020] [Indexed: 01/21/2023]
Abstract
The chemistry of an organic charge transfer complex (CT complex) between pyrazole (donor) and chloranilic acid (acceptor) has been explored in ethanol at room temperature. The synthesized complex has been characterized by various techniques such as FTIR, NMR, Single crystal X-ray diffraction and UV-visible spectroscopy. These techniques indicate that the cation and anion are joined together by the weak hydrogen bonding. This molecular framework is a result of inter N+-H⋯O- bonding between donor and acceptor moieties. The elemental analysis and FTIR spectrum of semi-crystal complex along with Job's plot indicate the formation of 2: 1 HBCT-complex. The bioorganic chemistry of the present CT complex is established well toward antimicrobial screening and DNA binding capabilities. Antimicrobial activity was screened for gram positive and gram negative bacteria and various fungi. Molecular docking shows that the CT complex binds perfectly with the B-DNA and reveals free energy of binding (FEB) value of -198.4 kcal mol-1. TD-DFT calculations using basis set B3LYP/6-311G** give theoretical confirmation along with HOMO (-3.9421 eV) → LUMO (-2.4903 eV) electronic energy gap (ΔE) to be 1.4521 eV. Theoretical analysis corroborates well the biological properties.
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Affiliation(s)
- Ishaat M Khan
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh 202002, India.
| | - Maidul Islam
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh 202002, India
| | - Sonam Shakya
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh 202002, India
| | - Kehkashan Alam
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh 202002, India
| | - Nisat Alam
- Department of Bio-chemistry, School of Chemical and Life Science, Jamia Hamdard, New Delhi 110062, India
| | - M Shahid
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh 202002, India
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Makoye A, Pogrebnoi A, Pogrebnaya T. Lawsone isomers, lawsone ether and bilawsone for dye-sensitized solar cells applications: DFT and UV-Vis studies. J Mol Graph Model 2019; 94:107457. [PMID: 31586755 DOI: 10.1016/j.jmgm.2019.107457] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2019] [Revised: 09/22/2019] [Accepted: 09/24/2019] [Indexed: 11/15/2022]
Abstract
Structural and optoelectronic properties of lawsone (L), lawsone ether (LE) and bilawsone (BL) were studied theoretically using the DFT and time-dependent DFT methods with hybrid functional B3LYP5 and 6-311G (2d,p) basis set. For the monomer lawsone molecule, isomerization reaction between two rotational isomers was analyzed based on a thermodynamic approach. The electronic spectra of the dyes molecules in a vacuum and solvents (DMSO and CH2Cl2) were computed. The maximum wavelengths were found at 355-408 nm for the LE and 350-448 nm for BL that indicated bands shift to visible range compared to L (340 nm). The UV-Vis spectra of the L and BL were measured experimentally in DMSO solution. For the BL, a broad and intensive band was observed in a visible region at 452 nm that apparently would favour sensitizing ability of the dye. The optoelectronic properties of the LE and BL showed them as more promising candidates for DSSCs applications compared to the individual lawsone dye.
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Affiliation(s)
- Amosi Makoye
- Department of Materials, Energy Science and Engineering, The Nelson Mandela African Institution of Science and Technology, Arusha, United Republic of Tanzania; Department of Natural Sciences, Mbeya University of Science and Technology, Mbeya, United Republic of Tanzania.
| | - Alexander Pogrebnoi
- Department of Materials, Energy Science and Engineering, The Nelson Mandela African Institution of Science and Technology, Arusha, United Republic of Tanzania.
| | - Tatiana Pogrebnaya
- Department of Materials, Energy Science and Engineering, The Nelson Mandela African Institution of Science and Technology, Arusha, United Republic of Tanzania.
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Gawale Y, Sekar N. Investigating the excited state optical properties and origin of large stokes shift in Benz[c,d]indole N-Heteroarene BF 2 dyes with ab initio tools. J Photochem Photobiol B 2018; 178:472-80. [PMID: 29232571 DOI: 10.1016/j.jphotobiol.2017.12.006] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2017] [Revised: 11/15/2017] [Accepted: 12/05/2017] [Indexed: 12/30/2022]
Abstract
Density Functional Theory and Time Dependent Density Functional Theory computations reveal experimental trends accurately and provide an insight into the origin of red shifted optical spectra, large Stokes shift, nonlinear optical responses and quantitative description of the singlet-triplet energy gap of recently synthesized highly fluorescent membrane permeable benz[c,d]indole N-heteroarene BF2 rigidified BBN and BBC dyes. Our results benchmark the importance of the DFT functionals and polarization functions using the accurate basis set for the calculations of excitation energies, band gaps, dipole moment, non-linear optical properties and geometrical parameters. The anomalous increase in dipole moment in the excited state and pronounced geometric distortion are found to be responsible for the increased Stokes shift in BBN dyes. The resultant decrease in the HOMO-LUMO energy gap was found to be responsible for the red shift in BBC dyes. Enhanced nonlinear optical properties and inverse relationship between the Stokes shift and static hyperpolarizability were found in these dyes. Their possible potential therapeutic use as a photosensitizer in photodynamic therapy is proposed on the basis of vertical triplet energies resulting in the range of 0.78 to 0.88eV. The singlet-triplet energetic gaps suggest that the simple variation of the N-heteroarenes or their post functionalization can lead to the efficient generation of singlet oxygen. Further, we compared these new class of dyes with conventional aza-BODIPY and BODIPY dyes, thereby confirming their use as alternative promising candidates for nonlinear optics, triplet sensitizers, and imaging.
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An B, Yuan H, Zhu Q, Li Y, Guo X, Zhang J. Theoretical insight into the excited-state intramolecular proton transfer mechanisms of three amino-type hydrogen-bonding molecules. Spectrochim Acta A Mol Biomol Spectrosc 2017; 175:36-42. [PMID: 28012390 DOI: 10.1016/j.saa.2016.12.020] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2016] [Revised: 12/12/2016] [Accepted: 12/14/2016] [Indexed: 06/06/2023]
Abstract
Excited-state intramolecular proton transfer (ESIPT) dynamics of the amino-type hydrogen-bonding compound 2-(2'-aminophenyl)benzothiazole (PBT-NH2) as well as its two derivatives 2-(5'-cyano-2'-aminophenyl)benzothiazole (CN-PBT-NH2) and 2-(5'-cyano-2'-tosylaminophenyl)benzothiazole (CN-PBT-NHTs) were studied by the time-dependent density functional theory (TD-DFT) approach with the B3LYP density functional, and their absorption and emission spectra were also explored at the same level of theory. A good agreement is observed between the theoretical simulations and experimental spectra, indicating that the present calculations are reasonably reliable. In addition, it is also found that the energy barriers of the first excited singlet state of the three targeted molecules along the ESIPT reaction are computed to be 0.38, 0.34 and 0.12eV, respectively, showing the trend of gradual decrease, which implies that the introduction of the electron-withdrawing cyano or tosyl group can facilitate the occurrence of the ESIPT reaction of these amino-type H-bonding systems. Following the ESIPT, both CN-PBT-NH2 and CN-PBT-NHTs dye molecules can undergo the cis-trans isomerization reactions in the ground-state and excited-state potential energy curves along the C2-C3 bond between benzothiazole and phenyl moieties, where the energy barriers of the trans-tautomer→cis-tautomer isomerizations in the ground states are calculated to be 0.83 and 0.34eV, respectively. According to our calculations, it is plausible that there may exist the long-lived trans-tautomer species in the ground states of CN-PBT-NH2 and CN-PBT-NHTs.
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Affiliation(s)
- Beibei An
- Institute of Environmental and Analytical Sciences, College of Chemistry and Chemical Engineering, Henan University, Kaifeng 475004, People's Republic of China
| | - Huijuan Yuan
- Institute of Environmental and Analytical Sciences, College of Chemistry and Chemical Engineering, Henan University, Kaifeng 475004, People's Republic of China
| | - Qiuling Zhu
- Institute of Environmental and Analytical Sciences, College of Chemistry and Chemical Engineering, Henan University, Kaifeng 475004, People's Republic of China
| | - Yuanyuan Li
- Institute of Environmental and Analytical Sciences, College of Chemistry and Chemical Engineering, Henan University, Kaifeng 475004, People's Republic of China
| | - Xugeng Guo
- Institute of Environmental and Analytical Sciences, College of Chemistry and Chemical Engineering, Henan University, Kaifeng 475004, People's Republic of China.
| | - Jinglai Zhang
- Institute of Environmental and Analytical Sciences, College of Chemistry and Chemical Engineering, Henan University, Kaifeng 475004, People's Republic of China.
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Li H, Liu Y, Yang Y, Yang D, Sun J. Excited-state intramolecular hydrogen bonding of compounds based on 2-(2-hydroxyphenyl)-1,3-benzoxazole in solution: a TDDFT study. Spectrochim Acta A Mol Biomol Spectrosc 2014; 133:818-824. [PMID: 25000569 DOI: 10.1016/j.saa.2014.06.072] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2014] [Revised: 04/25/2014] [Accepted: 06/01/2014] [Indexed: 06/03/2023]
Abstract
The excited-state properties of intramolecular hydrogen bonding in the compounds based on 2-(2-hydroxyphenyl)-1,3-benzoxazole (6 and its tautomers 6a and 6b) have been investigated using theoretical methods. According to the geometric optimization and IR spectra in the ground and excited states calculated by density functional theory (DFT) and time-dependent DFT (TD-DFT) methods respectively, the type of intramolecular hydrogen bonding N⋯HO in 6 and 6a is demonstrated to be significantly strengthened, while NH⋯O in the tautomers 6a and 6b are proved to be sharply weakened upon excitation to excited state S1. The calculated absorption peaks of 6 are in good accordance with the experimental results. Moreover, other compounds based on 6 that R1 and R2 are both substituted as well as that only R1 is substituted are investigated to understand the effect of substituent on intramolecular hydrogen bonding. It is found that the hydrogen bond strength can be controlled by the inductive field effect of the substituent. In addition, the intramolecular charge transfers (ICT) of the S1 state for 6 and its tautomers 6a and 6b were theoretically investigated by analyses of molecular orbital.
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Affiliation(s)
- Hui Li
- Department of Physics, Henan Normal University, Xinxiang 453007, China
| | - Yufang Liu
- Department of Physics, Henan Normal University, Xinxiang 453007, China.
| | - Yonggang Yang
- Department of Physics, Henan Normal University, Xinxiang 453007, China
| | - Dapeng Yang
- Physics Laboratory, North China University of Water Resources and Electric Power, Zhengzhou 450045, China
| | - Jinfeng Sun
- Department of Physics, Henan Normal University, Xinxiang 453007, China
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