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Van Stappen C, Deng Y, Liu Y, Heidari H, Wang JX, Zhou Y, Ledray AP, Lu Y. Designing Artificial Metalloenzymes by Tuning of the Environment beyond the Primary Coordination Sphere. Chem Rev 2022; 122:11974-12045. [PMID: 35816578 DOI: 10.1021/acs.chemrev.2c00106] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Metalloenzymes catalyze a variety of reactions using a limited number of natural amino acids and metallocofactors. Therefore, the environment beyond the primary coordination sphere must play an important role in both conferring and tuning their phenomenal catalytic properties, enabling active sites with otherwise similar primary coordination environments to perform a diverse array of biological functions. However, since the interactions beyond the primary coordination sphere are numerous and weak, it has been difficult to pinpoint structural features responsible for the tuning of activities of native enzymes. Designing artificial metalloenzymes (ArMs) offers an excellent basis to elucidate the roles of these interactions and to further develop practical biological catalysts. In this review, we highlight how the secondary coordination spheres of ArMs influence metal binding and catalysis, with particular focus on the use of native protein scaffolds as templates for the design of ArMs by either rational design aided by computational modeling, directed evolution, or a combination of both approaches. In describing successes in designing heme, nonheme Fe, and Cu metalloenzymes, heteronuclear metalloenzymes containing heme, and those ArMs containing other metal centers (including those with non-native metal ions and metallocofactors), we have summarized insights gained on how careful controls of the interactions in the secondary coordination sphere, including hydrophobic and hydrogen bonding interactions, allow the generation and tuning of these respective systems to approach, rival, and, in a few cases, exceed those of native enzymes. We have also provided an outlook on the remaining challenges in the field and future directions that will allow for a deeper understanding of the secondary coordination sphere a deeper understanding of the secondary coordintion sphere to be gained, and in turn to guide the design of a broader and more efficient variety of ArMs.
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Affiliation(s)
- Casey Van Stappen
- Department of Chemistry, University of Texas at Austin, 105 East 24th Street, Austin, Texas 78712, United States
| | - Yunling Deng
- Department of Chemistry, University of Texas at Austin, 105 East 24th Street, Austin, Texas 78712, United States
| | - Yiwei Liu
- Department of Chemistry, University of Illinois, Urbana-Champaign, 505 South Mathews Avenue, Urbana, Illinois 61801, United States
| | - Hirbod Heidari
- Department of Chemistry, University of Texas at Austin, 105 East 24th Street, Austin, Texas 78712, United States
| | - Jing-Xiang Wang
- Department of Chemistry, University of Texas at Austin, 105 East 24th Street, Austin, Texas 78712, United States
| | - Yu Zhou
- Department of Chemistry, University of Texas at Austin, 105 East 24th Street, Austin, Texas 78712, United States
| | - Aaron P Ledray
- Department of Chemistry, University of Texas at Austin, 105 East 24th Street, Austin, Texas 78712, United States
| | - Yi Lu
- Department of Chemistry, University of Texas at Austin, 105 East 24th Street, Austin, Texas 78712, United States.,Department of Chemistry, University of Illinois, Urbana-Champaign, 505 South Mathews Avenue, Urbana, Illinois 61801, United States
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Khorobrykh S, Havurinne V, Mattila H, Tyystjärvi E. Oxygen and ROS in Photosynthesis. PLANTS (BASEL, SWITZERLAND) 2020; 9:E91. [PMID: 31936893 PMCID: PMC7020446 DOI: 10.3390/plants9010091] [Citation(s) in RCA: 119] [Impact Index Per Article: 29.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 12/29/2019] [Accepted: 01/02/2020] [Indexed: 12/14/2022]
Abstract
Oxygen is a natural acceptor of electrons in the respiratory pathway of aerobic organisms and in many other biochemical reactions. Aerobic metabolism is always associated with the formation of reactive oxygen species (ROS). ROS may damage biomolecules but are also involved in regulatory functions of photosynthetic organisms. This review presents the main properties of ROS, the formation of ROS in the photosynthetic electron transport chain and in the stroma of chloroplasts, and ROS scavenging systems of thylakoid membrane and stroma. Effects of ROS on the photosynthetic apparatus and their roles in redox signaling are discussed.
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Affiliation(s)
| | | | | | - Esa Tyystjärvi
- Department of Biochemistry/Molecular Plant Biology, University of Turku, FI-20014 Turku, Finland or (S.K.); (V.H.); (H.M.)
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Müh F, Glöckner C, Hellmich J, Zouni A. Light-induced quinone reduction in photosystem II. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2011; 1817:44-65. [PMID: 21679684 DOI: 10.1016/j.bbabio.2011.05.021] [Citation(s) in RCA: 163] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2011] [Revised: 05/20/2011] [Accepted: 05/23/2011] [Indexed: 10/18/2022]
Abstract
The photosystem II core complex is the water:plastoquinone oxidoreductase of oxygenic photosynthesis situated in the thylakoid membrane of cyanobacteria, algae and plants. It catalyzes the light-induced transfer of electrons from water to plastoquinone accompanied by the net transport of protons from the cytoplasm (stroma) to the lumen, the production of molecular oxygen and the release of plastoquinol into the membrane phase. In this review, we outline our present knowledge about the "acceptor side" of the photosystem II core complex covering the reaction center with focus on the primary (Q(A)) and secondary (Q(B)) quinones situated around the non-heme iron with bound (bi)carbonate and a comparison with the reaction center of purple bacteria. Related topics addressed are quinone diffusion channels for plastoquinone/plastoquinol exchange, the newly discovered third quinone Q(C), the relevance of lipids, the interactions of quinones with the still enigmatic cytochrome b559 and the role of Q(A) in photoinhibition and photoprotection mechanisms. This article is part of a Special Issue entitled: Photosystem II.
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Affiliation(s)
- Frank Müh
- Max-Volmer-Laboratorium für Biophysikalische Chemie, Technische Universität Berlin, Strasse des 17. Juni 135, D-10623 Berlin, Germany
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Mamedov F, Gadjieva R, Styring S. Oxygen-induced changes in the redox state of the cytochrome b559 in photosystem II depend on the integrity of the Mn cluster. PHYSIOLOGIA PLANTARUM 2007; 131:41-49. [PMID: 18251923 DOI: 10.1111/j.1399-3054.2007.00938.x] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
The effect of oxygen and anaerobiosis on the redox properties of Cyt b(559) was investigated in PSII preparations from spinach with different degree of disintegration of the donor side. Comparative studies were performed on intact PSII membranes and PSII membranes that were deprived of the 18-kDa peripheral subunit (0.25 NaCl washed), the 18- and 24-kDa peripheral subunits (1 M NaCl washed), the 18-, 24- and 33-kDa peripheral subunits (1.2 M CaCl(2) washed), Cl depleted and after complete depletion of the Mn cluster (Tris washed). In active PSII centers, about 75% of Cyt b(559) was found in the high-potential form and the rest in the intermediate potential form. With decomposition of the donor side, the intermediate potential form started to dominate, reaching more than 90% after Tris treatment. The oxygen-dependent conversion of the intermediate potential form of Cyt b(559) into the low-potential and high-potential forms was only observed after treatments that directly affect the Mn cluster. In PSII membranes, deprived of all three extrinsic subunits (CaCl(2) treatment), 21% of the intermediate potential form was converted into the low-potential form and 14% into the high-potential form by the removal of oxygen. In Tris-washed PSII membranes, completely lacking the Mn cluster, this conversion amounted to 60 and 33%, respectively. In intact PSII membranes, the oxygen-dependent conversion did not occur. The possible physiological role of this oxygen-dependent behavior of the Cyt b(559) redox forms during the assembly/photoactivation cycle of PSII is discussed.
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Affiliation(s)
- Fikret Mamedov
- Molecular Biomimetics, Department of Photochemistry and Molecular Science, Angström Laboratory, Uppsala University, PO Box 523, 75120 Uppsala, Sweden.
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Semin BK, Seibert M. Flash-Induced Blocking of the High-Affinity Manganese-Binding Site in Photosystem II by Iron Cations: Dependence on the Dark Interval between Flashes and Binary Oscillations of Fluorescence Yield. J Phys Chem B 2006; 110:25532-42. [PMID: 17166004 DOI: 10.1021/jp0652796] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Incubation of Fe(II) cations with Mn-depleted PSII membranes (PSII(-Mn)) under weak continuous light is accompanied by blocking of the high-affinity, Mn-binding (HAZ) site with ferric cations (Semin, B.K. et al. Biochemistry 2002, 41, 5854-5864). In this study we investigated the blocking yield under single-turnover flash conditions. The flash-probe fluorescence method was used to estimate the blocking efficiency. We found that the yield of blocking increases with flash number and reaches 50% after 7 flashes. When the dark interval between the flashes (Delta t) was varied, we found that the percentage of blocking decreases at Delta t < 100 ms (t 1/2, 4-10 ms). No inhibition of the blocking yield was found at longer time intervals (as with photoactivation). This result shows the necessity of a dark rearrangement during the blocking process (the dual-site hypothesis described in the text) and indicates the formation of a binuclear iron center. During the blocking experiments, we found a binary oscillation of the Fmax elicited during a train of flashes. The oscillations were observed only in the presence of Fe(II) cations or other electron donors (including Mn(II)) but not in the presence of Ca2+. Chelators had no effect on the oscillations. Our results indicate that the oscillations are due to processes on the acceptor side of PSII and to the appearance of "acceptor X" after odd flashes. Acceptor X is reduced by QA- at very high rate (<<2 ms), is not sensitive to DCMU, and is rather stable in the dark (t l/2 approximately 2 min). These properties are similar to those of nonheme Fe(III) (Fe(III)NHI). When Fe(II)NHI was oxidized with ferricyanide (Fe(CN)6), the fluorescence decay kinetics and yield of fluorescence were identical to those observed when the sample was exposed to 1 flash prior to the fluorescence measurement. We suggest that acceptor X is Fe(III)NHI, oxidized by the semiquinone form of QB-. This is similar to the mechanism of "reduction-induced oxidation of Fe(II)NHI" by exogenous quinones reported in the literature. We suggest that involvement of QB- in the oxidation of Fe(II)NHI in PSII(-Mn) membranes is due to the modification of the QB-binding site and increase of its redox potential resulting from extraction of the functional Mn cluster.
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Affiliation(s)
- Boris K Semin
- Chemical and Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado 80401, USA
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Kaminskaya O, Kern J, Shuvalov VA, Renger G. Extinction coefficients of cytochromes b559 and c550 of Thermosynechococcus elongatus and Cyt b559/PS II stoichiometry of higher plants. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2005; 1708:333-41. [PMID: 15950926 DOI: 10.1016/j.bbabio.2005.05.002] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2004] [Revised: 03/21/2005] [Accepted: 05/03/2005] [Indexed: 10/25/2022]
Abstract
"Reduced minus oxidized" difference extinction coefficients Deltavarepsilon in the alpha-bands of Cyt b559 and Cyt c550 were determined by using functionally and structurally well-characterized PS II core complexes from the thermophilic cyanobacterium Thermosynechococcus elongatus. Values of 25.1+/-1.0 mM(-1) cm(-1) and 27.0+/-1.0 mM(-1) cm(-1) were obtained for Cyt b559 and Cyt c550, respectively. Anaerobic redox titrations covering the wide range from -250 up to +450 mV revealed that the heme groups of both Cyt b559 and Cyt c550 exhibit homogenous redox properties in the sample preparation used, with E(m) values at pH 6.5 of 244+/-11 mV and -94+/-21 mV, respectively. No HP form of Cyt b559 could be detected. Experiments performed on PS II membrane fragments of higher plants where the content of the high potential form of Cyt b559 was varied by special treatments (pH, heat) have shown that the alpha-band extinction of Cyt b559 does not depend on the redox form of the heme group. Based on the results of this study the Cyt b559/PSII stoichiometry is inferred to be 1:1 not only in thermophilic cyanobacteria as known from the crystal structure but also in PSII of plants. Possible interrelationships between the structure of the Q(B) site and the microenvironment of the heme group of Cyt b559 are discussed.
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Affiliation(s)
- Olga Kaminskaya
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region 142292, Russia
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Lazár D, Ilík P, Kruk J, Strzałka K, Naus J. A theoretical study on effect of the initial redox state of cytochrome b559 on maximal chlorophyll fluorescence level (F(M)): implications for photoinhibition of photosystem II. J Theor Biol 2004; 233:287-300. [PMID: 15619367 DOI: 10.1016/j.jtbi.2004.10.015] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2004] [Revised: 10/06/2004] [Accepted: 10/08/2004] [Indexed: 10/26/2022]
Abstract
In this work, we extended the reversible radical pair model which describes energy utilization and electron transfer up to the first quinone electron acceptor (Q(A)) in photosystem II (PSII), by redox reactions involving cytochrome (cyt) b559. In the model, cyt b559 accepts electrons from the reduced primary electron acceptor in PSII, pheophytin, and donates electrons to the oxidized primary electron donor in PSII (P680+). Theoretical simulations of chlorophyll fluorescence rise based on the model show that the maximal fluorescence, F(M), increases with an increasing amount of initially reduced cyt b559. In this work we applied, the first to our knowledge, metabolic control analysis (MCA) to a model of reactions in PSII. The MCA was used to determine to what extent the reactions occurring in the model control the F(M) level and how this control depends on the initial redox state of cyt b559. The simulations also revealed that increasing the amount of initially reduced cyt b559 could protect PSII against photoinhibition. Also experimental data, which might be used to validate our theory, are presented and discussed.
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Affiliation(s)
- Dusan Lazár
- Laboratory of Biophysics, Department of Experimental Physics, Faculty of Science, Palacký University, tr. Svobody 26, 771 46 Olomouc, Czech Republic.
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García-Rubio I, Martínez JI, Picorel R, Yruela I, Alonso PJ. HYSCORE Spectroscopy in the Cytochrome b559 of the Photosystem II Reaction Center. J Am Chem Soc 2003; 125:15846-54. [PMID: 14677976 DOI: 10.1021/ja035364g] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A HYSCORE investigation of the heme center in the cytochrome b(559) is presented. To assign the observed signals to specific nuclei, bis-imidazol coordinated heme compounds that model the iron environment in cytochrome b(559) are also studied. In the model compounds selective isotopic substitution of nitrogen atoms has been performed. The HYSCORE spectra allow us to obtain the hyperfine and quadrupolar coupling tensors of heme and imidazol bonding nitrogen atoms. The results can be interpreted in terms of the structure and the electronic distribution of the active center. The hyperfine tensors indicate that the unpaired electron is confined in a nonbonding iron orbital with a negligible nitrogen p orbital contribution. Quadrupolar coupling tensors suggest that the orientation of the semioccupied orbital is driven by the orientation of the two parallel imidazol rings of the axial histidine side chains. The results are discussed in terms of the structure-function relationship of cytochromes.
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Affiliation(s)
- Inés García-Rubio
- Instituto de Ciencia de Materiales de Aragón, Consejo Superior de Investigaciones Científicas, Universidad de Zaragoza, Plaza S. Francisco s/n, E-50009 Zaragoza, Spain
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Yruela I, Miota F, Torrado E, Seibert M, Picorel R. Cytochrome b559 content in isolated photosystem II reaction center preparations. EUROPEAN JOURNAL OF BIOCHEMISTRY 2003; 270:2268-73. [PMID: 12752446 DOI: 10.1046/j.1432-1033.2003.03597.x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
The cytochrome b559 content was examined in five types of isolated photosystem II D1-D2-cytochrome b559 reaction center preparations containing either five or six chlorophylls per reaction center. The reaction center complexes were obtained following isolation procedures that differed in chromatographic column material, washing buffer composition and detergent concentration. Two different types of cytochrome b559 assays were performed. The absolute heme content in each preparation was obtained using the oxidized-minus-reduced difference extinction coefficient of cytochrome b559 at 559 nm. The relative amount of D1 and cytochrome b559alpha-subunit polypeptide was also calculated for each preparation from immunoblots obtained using antibodies raised against the two polypeptides. The results indicate that the cytochrome b559 heme content in photosystem II reaction center complexes can vary with the isolation procedure, but the variation of the cytochrome b559alpha-subunit/D1 polypeptide ratio was even greater. This variation was not found in the PSII-enriched membrane fragments used as the RC-isolation starting material, as different batches of membranes obtained from spinach harvested at different seasons of the year or those from sugar beets grown in a chamber under controlled environmental conditions lack variation in their alpha-subunit/D1 polypeptide ratio. A precise determination of the ratio using an RC1-control sample calibration curve gave a ratio of 1.25 cytochrome b559alpha-subunit per 1.0 D1 polypeptide in photosystem II membranes. We conclude that the variations found in the reaction center preparations were due to the different procedures used to isolate and purify the different reaction center complexes.
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Burda K, Kruk J, Borgstädt R, Stanek J, Strzałka K, Schmid GH, Kruse O. Mössbauer studies of the non-heme iron and cytochrome b559 in a Chlamydomonas reinhardtii PSI- mutant and their interactions with alpha-tocopherol quinone. FEBS Lett 2003; 535:159-65. [PMID: 12560096 DOI: 10.1016/s0014-5793(02)03895-4] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
Spin and valence states of the non-heme iron and the heme iron of cytochrome b559, as well as their interactions with alpha-tocopherol quinone (alpha-TQ) in photosystem II (PSII) thylakoid membranes prepared from the Chlamydomonas reinhardtii PSI- mutant have been studied using Mössbauer spectroscopy. Both of the iron atoms are in low spin ferrous states. The Debye temperature of the non-heme is 194 K and of the heme iron is 182 K. The treatment of alpha-TQ does not change the spin and the valence states of the non-heme iron but enhances the covalence of its bonds. alpha-TQ oxidizes the heme iron into the high spin Fe3+ state. A possible role of the non-heme iron and alpha-TQ in electron flow through the PSII is discussed.
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Affiliation(s)
- Kvetoslava Burda
- Institute of Nuclear Physics, ul. Radzikowskiego 152, 31-342 Cracow, Poland
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Kuroiwa S, Tonaka M, Kawamori A, Akabori K. The position of cytochrome b(559) relative to Q(A) in photosystem II studied by electron-electron double resonance (ELDOR). BIOCHIMICA ET BIOPHYSICA ACTA 2000; 1460:330-7. [PMID: 11106773 DOI: 10.1016/s0005-2728(00)00199-7] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The electron-electron double resonance (ELDOR) method was applied to measure the dipole interaction between cytochrome (Cyt) b(+)(559) and the primary acceptor quinone (Q(-)(A)), observed at g=2.0045 with the peak to peak width of about 9 G, in Photosystem II (PS II) in which the non-heme Fe(2+) was substituted by Zn(2+). The paramagnetic centers of Cyt b(+)(559)Y(D)Q(-)(A) were trapped by illumination at 273 K for 8 min, followed by dark adaptation for 3 min and freezing into 77 K. The distance between the pair Cyt b(+)(559)-Q(-)(A) was estimated from the dipole interaction constant fitted to the observed ELDOR time profile to be 40+/-1 A. In the membrane oriented PS II particles the angle between the vector from Q(A) to Cyt b(559) and the membrane normal was determined to be 80+/-5 degrees. The position of Cyt b(559) relative to Q(A) suggests that the heme plane is located on the stromal side of the thylakoid membrane. ELDOR was not observed for Cyt b(+)(559) Y(D) spin pair, suggesting the distance between them is more than 50 A.
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Affiliation(s)
- S Kuroiwa
- Faculty of Science, Kwansei Gakuin University, Uegahara 1-1-155, Nishinomiya 662-8501, Japan
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Kaminskaya O, Kurreck J, Irrgang KD, Renger G, Shuvalov VA. Redox and spectral properties of cytochrome b559 in different preparations of photosystem II. Biochemistry 1999; 38:16223-35. [PMID: 10587445 DOI: 10.1021/bi991257g] [Citation(s) in RCA: 47] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A detailed analysis of the properties of cytochrome b(559) (Cyt b(559)) in photosystem II (PS II) preparations with different degrees of structural complexity is presented. It reveals that (i) D1-D2-Cyt b(559) complexes either in solubilized form or incorporated into liposomes contain only one type of Cyt b(559) with E(m) values of 60 +/- 5 and 100 +/- 10 mV, respectively, at pH 6.8; (ii) in oxygen-evolving solubilized PS II core complexes Cyt b(559) exists predominantly (>85%) as an LP form with an E(m,7) of 125 +/- 10 mV and a minor fraction with an E(m,7) of -150 +/- 15 mV; (iii) in oxygen-evolving PS II membrane fragments three different redox forms are discernible with E(m) values of 390 +/- 15 mV (HP form), 230 +/- 20 mV (IP form), and 105 +/- 25 mV (LP form) and relative amplitudes of 58, 24, and 18%, respectively, at pH 7.3; (iv) the E(m) values are almost pH-independent between pH 6 and 9.5 in all sample types except D1-D2-Cyt b(559) complexes incorporated into liposomes with a slope of -29 mV/pH unit, when the pH increases from 6 to 9.5 (IP and LP form in PS II membrane fragments possibly within a restricted range from pH 6.5 to 8); (v) at pH >8 the HP Cyt b(559) progressively converts to the IP form with increasing pH; (vi) the reduced-minus-oxidized optical difference spectra of Cyt b(559) are very similar in the lambda range of 360-700 nm for all types except for the HP form which exhibits pronounced differences in the Soret band; and (vii) PS II membrane fragments and core complexes are inferred to contain about two Cyt b(559) hemes per PS II. Possible implications of conformational changes near the heme group and spin state transitions of the iron are discussed.
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Affiliation(s)
- O Kaminskaya
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region.
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Lavoie H, Gallant J, Grandbois M, Blaudez D, Desbat B, Boucher F, Salesse C. The behavior of membrane proteins in monolayers at the gas–water interface: comparison between photosystem II, rhodopsin and bacteriorhodopsin. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 1999. [DOI: 10.1016/s0928-4931(99)00124-1] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Gadjieva R, Mamedov F, Renger G, Styring S. Interconversion of low- and high-potential forms of cytochrome b(559) in Tris-washed photosystem II membranes under aerobic and anaerobic conditions. Biochemistry 1999; 38:10578-84. [PMID: 10441155 DOI: 10.1021/bi9904656] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In this study, the reversible conversion between the high- (HP) and low-potential (LP) forms of Cytb(559) has been analyzed in Tris-washed photosystem II (PSII) enriched membranes. These samples are deprived of the Mn cluster of the water-oxidizing complex (WOC) and the extrinsic regulatory proteins. The results obtained by application of optical and EPR spectroscopy reveal that (i) under aerobic conditions, the vast majority of Cytb(559) exhibits a low midpoint potential, (ii) after removal of O(2) in the dark, a fraction of Cytb(559) is converted to the high-potential form which reaches level of about 25% of the total Cytb(559), (iii) a similar dark transformation of LP --> HP Cytb(559) occurs under reducing conditions (8 mM hydroquinone), (iv) under anaerobic conditions and in the presence of 8 mM hydroquinone, about 60% of the Cytb(559) attains the HP form, (v) the interconversion is reversible with the re-establishment of aerobic conditions, and (vi) aerobic and oxidizing conditions (2 mM ferricyanide or 0.5 mM potassium iridate) induce a decrease of the amount of the HP form, also showing that the conversion is reversible. This reversible interconversion between LP and HP Cytb(559) is not observed in PSII membrane fragments with an intact WOC. On the basis of these findings, the possibility is discussed that the O(2)-dependent conversion of Cytb(559) in PSII complexes lacking a functionally competent WOC is related to a protective role of Cytb(559) in photoinhibition and/or that it is involved in the regulation of the assembly of a competent water-oxidizing complex in PSII.
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Affiliation(s)
- R Gadjieva
- Department of Biochemistry, Center for Chemistry and Chemical Engineering, University of Lund, P.O. Box 124, S-22100 Lund, Sweden
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Gallant J, Desbat B, Vaknin D, Salesse C. Polarization-modulated infrared spectroscopy and x-ray reflectivity of photosystem II core complex at the gas-water interface. Biophys J 1998; 75:2888-99. [PMID: 9826610 PMCID: PMC1299961 DOI: 10.1016/s0006-3495(98)77731-8] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The state of photosystem II core complex (PS II CC) in monolayer at the gas-water interface was investigated using in situ polarization-modulated infrared reflection absorption spectroscopy and x-ray reflectivity techniques. Two approaches for preparing and manipulating the monolayers were examined and compared. In the first, PS II CC was compressed immediately after spreading at an initial surface pressure of 5.7 mN/m, whereas in the second, the monolayer was incubated for 30 min at an initial surface pressure of 0.6 mN/m before compression. In the first approach, the protein complex maintained its native alpha-helical conformation upon compression, and the secondary structure of PS II CC was found to be stable for 2 h. The second approach resulted in films showing stable surface pressure below 30 mN/m and the presence of large amounts of beta-sheets, which indicated denaturation of PS II CC. Above 30 mN/m, those films suffered surface pressure instability, which had to be compensated by continuous compression. This instability was correlated with the formation of new alpha-helices in the film. Measurements at 4 degreesC strongly reduced denaturation of PS II CC. The x-ray reflectivity studies indicated that the spread film consists of a single protein layer at the gas-water interface. Altogether, this study provides direct structural and molecular information on membrane proteins when spread in monolayers at the gas-water interface.
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Affiliation(s)
- J Gallant
- GREIB, Département de Chimie-Biologie, Université du Québec à Trois-Rivières, Trois-Rivières, Québec, Canada
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Affiliation(s)
- D H Stewart
- Department of Chemistry, Yale University, New Haven, CT 06520-8107, USA
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McNamara VP, Sutterwala FS, Pakrasi HB, Whitmarsh J. Structural model of cytochrome b559 in photosystem II based on a mutant with genetically fused subunits. Proc Natl Acad Sci U S A 1997; 94:14173-8. [PMID: 9391172 PMCID: PMC28452 DOI: 10.1073/pnas.94.25.14173] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
Photosystem II is a reaction center protein complex located in photosynthetic membranes of plants, algae, and cyanobacteria. Using light energy, photosystem II catalyzes the oxidation of water and the reduction of plastoquinone, resulting in the release of molecular oxygen. A key component of photosystem II is cytochrome b559, a membrane-embedded heme protein with an unknown function. The cytochrome is unusual in that a heme links two separate polypeptide subunits, alpha and beta, either as a heterodimer (alphabeta) or as two homodimers (alpha2 and beta2). To determine the structural organization of cytochrome b559 in the membrane, we used site-directed mutagenesis to fuse the coding regions of the two respective genes in the cyanobacterium Synechocystis sp. PCC 6803. In this construction, the C terminus of the alpha subunit (9 kDa) is attached to the N terminus of the beta subunit (5 kDa) to form a 14-kDa alphabeta fusion protein that is predicted to have two membrane-spanning alpha-helices with antiparallel orientations. Cells containing the alphabeta fusion protein grow photoautotrophically and assemble functional photosystem II complexes. Optical spectroscopy shows that the alphabeta fusion protein binds heme and is incorporated into photosystem II. These data support a structural model of cytochrome b559 in which one heme is coordinated to an alpha2 homodimer and a second heme is coordinated to a beta2 homodimer. In this model, each photosystem II complex contains two cytochrome b559 hemes, with the alpha2 heme located near the stromal side of the membrane and the beta2 heme located near the lumenal side.
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Affiliation(s)
- V P McNamara
- Department of Plant Biology, U.S. Department of Agriculture/Agricultural Research Service, University of Illinois, Urbana, IL 61801, USA
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Fiege R, Schreiber U, Renger G, Lubitz W, Shuvalov VA. Study of heme Fe(III) ligated by OH- in cytochrome b-559 and its low temperature photochemistry in intact chloroplasts. FEBS Lett 1995; 377:325-9. [PMID: 8549748 DOI: 10.1016/0014-5793(95)01363-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
EPR properties of Cyt b-559 have been investigated in intact chloroplasts that are functionally competent in O2 evolution and in CO2 fixation. After chemical oxidation of Cyt b-559 by 10 mM 2,3-dicyano, 4,5-dichloro-p-benzoquinone (DDQ) the major part of Cyt b-559 is found to be present in the high spin Fe(III) form. Only a small fraction of low spin heme Fe(III) (less than 5%) was formed by chemical or light-induced oxidation. This fraction increased during aging of intact chloroplasts. A comparison with the EPR signal of Fe(III) in myoglobin (Mb) reveals that the structure of the high spin signal in intact chloroplasts is indicative for the presence of an axial OH- ligand at the heme Fe(III). This type of ligation comprised a considerable part (approximately 40%) of the total Cyt b-559 content. Removal of the Mn-cluster caused a change of the EPR parameters of OH- ligation. When in intact chloroplasts the heme Fe is chemically oxidized to Fe(III) ligated by OH-, this OH- ligation disappeared after a subsequent illumination at 80K by red light. Upon illumination at 140K this disappearance was accompanied by the formation of a high spin Fe(III) that is not ligated by OH-. These results are discussed in terms of removal of OH- from Fe(III) caused by structural changes or photooxidation at a complex of Cyt b-559 that could possibly also comprise the Mn-cluster. This photooxidation is assumed to be accompanied by the formation of a bound OH. radical. The possibility is discussed that this process is related to photosynthetic water oxidation.
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Affiliation(s)
- R Fiege
- Max-Volmer-Institut für Biophysikalische und Physikalische Chemie, Technische Universität Berlin, Germany
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