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Preeyanka N, Zhu Q, Das TK, Naaman R. The Importance of Spin-Polarized Charge Reorganization in the Catalytic Activity of D-Glucose Oxidase. Chemphyschem 2024; 25:e202400033. [PMID: 38411033 DOI: 10.1002/cphc.202400033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Revised: 02/25/2024] [Accepted: 02/26/2024] [Indexed: 02/28/2024]
Abstract
The reaction of D-glucose oxidase (GOx) with D- and L-glucose was investigated using confocal fluorescence microscopy and Hall voltage measurements, after the enzyme was adsorbed as a monolayer. By adsorbing the enzyme on a ferromagnetic substrate, we verified that the reaction is spin dependent. This conclusion was supported by monitoring the reaction when the enzyme is adsorbed on a Hall device that does not contain any magnetic elements. The spin dependence is consistent with the chiral-induced spin selectivity (CISS) effect; it can be explained by the improved fidelity of the electron transfer process through the chiral enzyme due to the coupling of the linear momentum of the electrons and their spin. Since the reaction studied often serve as a model system for enzymatic activity, the results may suggest the general importance of the spin-dependent electron transfer in bio-chemical processes.
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Affiliation(s)
- Naupada Preeyanka
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, 7610001, Israel
| | - Qirong Zhu
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, 7610001, Israel
| | - Tapan Kumar Das
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, 7610001, Israel
| | - Ron Naaman
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, 7610001, Israel
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Huang J, Gao Y, Chang Y, Peng J, Yu Y, Wang B. Machine Learning in Bioelectrocatalysis. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2306583. [PMID: 37946709 PMCID: PMC10787072 DOI: 10.1002/advs.202306583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Indexed: 11/12/2023]
Abstract
At present, the global energy crisis and environmental pollution coexist, and the demand for sustainable clean energy has been highly concerned. Bioelectrocatalysis that combines the benefits of biocatalysis and electrocatalysis produces high-value chemicals, clean biofuel, and biodegradable new materials. It has been applied in biosensors, biofuel cells, and bioelectrosynthesis. However, there are certain flaws in the application process of bioelectrocatalysis, such as low accuracy/efficiency, poor stability, and limited experimental conditions. These issues can possibly be solved using machine learning (ML) in recent reports although the combination of them is still not mature. To summarize the progress of ML in bioelectrocatalysis, this paper first introduces the modeling process of ML, then focuses on the reports of ML in bioelectrocatalysis, and ultimately makes a summary and outlook about current issues and future directions. It is believed that there is plenty of scope for this interdisciplinary research direction.
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Affiliation(s)
- Jiamin Huang
- Department of Environmental Science and Engineering, University of Science and Technology Beijing, Beijing, 100083, China
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, National Center for Nanoscience and Technology, Beijing, 100190, China
| | - Yang Gao
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, National Center for Nanoscience and Technology, Beijing, 100190, China
| | - Yanhong Chang
- Department of Environmental Science and Engineering, University of Science and Technology Beijing, Beijing, 100083, China
| | - Jiajie Peng
- School of Computer Science, Northwestern Polytechnical University, Xi'an, 710072, China
| | - Yadong Yu
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, China
| | - Bin Wang
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, National Center for Nanoscience and Technology, Beijing, 100190, China
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3
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Kong Q, Shi Q, Guo W, Qi X, Zhao Z, Qin M. Synergistic effect of zero-valent iron and static magnetic field on wastewater purification and bioelectricity generation in electroactive constructed wetlands. BIORESOURCE TECHNOLOGY 2023; 385:129417. [PMID: 37390928 DOI: 10.1016/j.biortech.2023.129417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 06/25/2023] [Accepted: 06/27/2023] [Indexed: 07/02/2023]
Abstract
This study investigated the enhancement effect of zero-valent iron and static magnetic field on the pollutant removal and power generation of electroactive constructed wetland. As demonstration, a conventional wetland was systematically modified by introducing zero-valent iron and then a static magnetic field, leading to progressive increases in pollutant (namely NH4+-N and chemical oxygen demand) removal efficiencies. By introducing both zero-valent iron and a static magnetic field, the power density increased four-fold to 9.2 mW/m2 and the internal resistance decreased by 26.7% to 467.4 Ω. Notably, static magnetic field decreased the relative abundance of electrochemically active bacteria (such as Romboutsia), while significantly enhancing species diversity. The permeability of the microbial cell membrane was improved, leading to a reduction in activation loss and internal resistance, thereby enhancing power generation capacity. Results showed that the addition of zero-valent iron and the applied magnetic field were beneficial to the pollutants removal and bioelectricity generation.
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Affiliation(s)
- Qiang Kong
- College of Geography and Environment, Shandong Normal University, Jinan 250014, PR China; Dongying Institute, Shandong Normal University, Dongying 257092, Shandong, PR China.
| | - Qiannan Shi
- College of Geography and Environment, Shandong Normal University, Jinan 250014, PR China
| | - Wenhan Guo
- College of Geography and Environment, Shandong Normal University, Jinan 250014, PR China
| | - Xiaoyu Qi
- College of Geography and Environment, Shandong Normal University, Jinan 250014, PR China
| | - Zheng Zhao
- College of Geography and Environment, Shandong Normal University, Jinan 250014, PR China
| | - Mengyu Qin
- College of Geography and Environment, Shandong Normal University, Jinan 250014, PR China
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4
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Wang Y, Gao Y, Hussain A, Lee HS. Optimization of biofilm conductance measurement with two-electrode microbial electrochemical cells (MECs). THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 858:159577. [PMID: 36283518 DOI: 10.1016/j.scitotenv.2022.159577] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 10/14/2022] [Accepted: 10/15/2022] [Indexed: 06/16/2023]
Abstract
This study was conducted to develop a standardized and consistent method for biofilm conductance measurement for an improved comprehension of extracellular electron transfer. Biofilm conductance (2.12 ± 0.25 × 10-4 S) with and without a fixed anode potential did not show significant difference. The conductance showed a sigmoidal relationship with anode potential. The current-voltage profile of the tested biofilm at applied voltage larger than 100 mV showed deviation from Ohm's law. Up to 69% decrease in biofilm conductance and deviation from Ohm's law were observed in the current-voltage profile when the measurement time increased. By choosing the voltage range (0- 100 mV) and step (25 mV), measurement time (100-s at each voltage step), and anode control mode, these operation settings were found more suitable for consistent and accurate biofilm conductance measurement in the 2-Au MEC system. This represents the first study that comprehensively evaluated the environmental and instrumental parameters for biofilm conductance measurement.
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Affiliation(s)
- Yifei Wang
- Department of Civil and Environmental Engineering, University of Waterloo, Waterloo, ON N2L 3G1, Canada
| | - Yaohuan Gao
- School of Human Settlements and Civil Engineering, Xi'an Jiaotong University, Xi'an, Shaanxi, PR China
| | - Abid Hussain
- Department of Civil and Environmental Engineering, Carleton University, Ottawa, ON, Canada
| | - Hyung-Sool Lee
- Department of Civil and Environmental Engineering, University of Waterloo, Waterloo, ON N2L 3G1, Canada; Institute for Environmental and Climate Technology, Korea Institute of Energy Technology, Naju-si, Jeollanam-do, Republic of Korea.
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The use of the electromagnetic field in microbial process bioengineering. ADVANCES IN APPLIED MICROBIOLOGY 2022; 121:27-72. [PMID: 36328731 DOI: 10.1016/bs.aambs.2022.08.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
An electromagnetic field (EMF) has been shown to have various stimulatory or inhibitory effects on microorganisms. Over the years, growing interest in this topic led to numerous discoveries suggesting the potential applicability of EMF in biotechnological processes. Among these observations are stimulative effects of this physical influence resulting in intensified biomass production, modification of metabolic activity, or pigments secretion. In this review, we present the current state of the art and underline the main findings of the application of EMF in bioprocessing and their practical meaning in process engineering using examples selected from studies on bacteria, archaea, microscopic fungi and yeasts, viruses, and microalgae. All biological data are presented concerning the classification of EMF. Furthermore, we aimed to highlight missing parts of contemporary knowledge and indicate weak spots in the approaches found in the literature.
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Mukherjee P, Pichiah S, Packirisamy G, Jang M. Biocatalyst physiology and interplay: a protagonist of MFC operation. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:43217-43233. [PMID: 34165738 DOI: 10.1007/s11356-021-15015-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Accepted: 06/16/2021] [Indexed: 06/13/2023]
Abstract
Microbial fuel cells (MFC) have been foreseen as a sustainable renewable energy resource to meet future energy demand. In the past, several studies have been executed in both benchtop and pilot scale to produce electrical energy from wastewater. The key role players in this technology that leads to the operation are microbes, mainly bacteria. The dominant among them is termed as "exoelectrogens" that have the capability to produce and transport electron by utilizing waste source. The current review focuses on such electrogenic bacteria's involvement for enhanced power generation of MFC. The pathway of electron transfer in their cell along and its conduction to the extracellular environment of the MFC system are critically discussed. The interaction of the microbes in various MFC operational conditions, including the role of substrate and solid electron acceptors, i.e., anode, external resistance, temperature, and pH, was also discussed in depth along with biotechnological advancement and future research perspective.
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Affiliation(s)
- Priya Mukherjee
- Environmental Nanotechnology Laboratory, Department of Environmental Science and Engineering, Indian Institute of Technology (ISM), Dhanbad, Jharkhand, 826004, India
| | - Saravanan Pichiah
- Environmental Nanotechnology Laboratory, Department of Environmental Science and Engineering, Indian Institute of Technology (ISM), Dhanbad, Jharkhand, 826004, India.
| | - Gopinath Packirisamy
- Department of Biotechnology, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, 247667, India
| | - Min Jang
- Department of Environmental Engineering, Kwangwoon University, 447-1, Wolgye-dong Nowon-Gu, Seoul, South Korea
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Tahir K, Miran W, Jang J, Maile N, Shahzad A, Moztahida M, Ghani AA, Kim B, Lee DS. MnCo 2O 4 coated carbon felt anode for enhanced microbial fuel cell performance. CHEMOSPHERE 2021; 265:129098. [PMID: 33272661 DOI: 10.1016/j.chemosphere.2020.129098] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2020] [Revised: 11/22/2020] [Accepted: 11/23/2020] [Indexed: 06/12/2023]
Abstract
A highly efficient anode is very crucial for an improved microbial fuel cell (MFC) performance. In this study, a binder-free manganese cobalt oxide (MnCo2O4@CF) anode was synthesized using a conventional carbon felt (CF) by a facile hydrothermal method. A large electrochemically active and rough electrode surface area of MnCo2O4@CF anode improved the substrate fluxes and microbial adhesion/growth. Furthermore, the electrochemical tests on the synthesized anode confirmed the superior bioelectrochemical activity, reduced ion transfer resistance, and excellent capacitance. This resulted in an improved power density (945 mW/m2), which was 3.8 times higher than that of CF anode. The variable valence state, high stability and biocompatibility of MnCo2O4@CF resulted in continuous current density performance for five MFC cycles. High-throughput biofilm analysis revealed the enrichment of electricity producing phylum of Proteobacteria and Bacteroidetes (∼90.0%), which signified that the modified MnCo2O4 anode accelerated the enrichment of electro-active microbes.
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Affiliation(s)
- Khurram Tahir
- Department of Environmental Engineering, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Waheed Miran
- International Center for Materials Nanoarchitectonics, National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
| | - Jiseon Jang
- R&D Institute of Radioactive Wastes, Korea Radioactive Waste Agency, 174 Gajeong-ro, Yuseong-gu, Daejeon, 34129, Republic of Korea
| | - Nagesh Maile
- Department of Environmental Engineering, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Asif Shahzad
- Department of Environmental Engineering, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Mokrema Moztahida
- Department of Environmental Engineering, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Ahsan Adul Ghani
- Department of Environmental Engineering, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Bolam Kim
- Department of Environmental Engineering, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Dae Sung Lee
- Department of Environmental Engineering, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea.
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Wang L, Long F, Liang D, Xiao X, Liu H. Hydrogen production from lignocellulosic hydrolysate in an up-scaled microbial electrolysis cell with stacked bio-electrodes. BIORESOURCE TECHNOLOGY 2021; 320:124314. [PMID: 33147527 DOI: 10.1016/j.biortech.2020.124314] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Revised: 10/16/2020] [Accepted: 10/21/2020] [Indexed: 06/11/2023]
Abstract
Hydrogen production from renewable resources via microbial electrolysis cells (MECs) is a promising approach for sustainable energy production. Yet high hydrogen yield from real feedstocks has not been demonstrated in up-scaled MECs. In this study, a 10-L single chamber MEC with a high electrode surface area to volume ratio (66 m2/m3) was constructed and electroactive cathodic biofilms were enriched for hydrogen evolution reaction. A high hydrogen yield of 91% was achieved using lignocellulosic hydrolysate with a hydrogen production rate of 0.71 L/L/D at an organic loading rate of 0.4 g/D. The anodic and cathodic microbial communities, with Enterococcus spp. as the known electroactive bacteria, were capable of achieving current densities of 13.7 A/m2 and 16.5 A/m2, respectively. A machine learning algorithm was used to investigate the correlation between community data and electrochemical performance, and the critical genera on determining current density were identified.
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Affiliation(s)
- Luguang Wang
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR 97333, USA
| | - Fei Long
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR 97333, USA
| | - Dawei Liang
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR 97333, USA; Beijing Key Laboratory of Bio-inspired Energy Materials and Devices, School of Space and Environment, Beihang University, Beijing 102206, China
| | - Xiang Xiao
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR 97333, USA; Institute of Physical Science and Information Technology, Anhui University, Hefei 230601, China
| | - Hong Liu
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR 97333, USA.
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Gao N, Fan Y, Long F, Qiu Y, Geier W, Liu H. Novel trickling microbial fuel cells for electricity generation from wastewater. CHEMOSPHERE 2020; 248:126058. [PMID: 32045974 DOI: 10.1016/j.chemosphere.2020.126058] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 12/17/2019] [Accepted: 01/28/2020] [Indexed: 06/10/2023]
Abstract
There are two main challenges associated with the scale-up of air-cathode microbial fuel cells (MFCs): performance reduction and cathode leakage/flooding. In this study, a novel 13.4 L reactor that contains 4 tubular MFCs was designed and operated in a trickling mode for 65 days under different conditions. The trickling water flow through the horizontally aligned MFCs alleviated the hydraulic pressure applied to the air-cathodes. With a total cathode working area of over 1700 cm2, this reactor generated power densities up to 1 W/m2 with coulombic efficiencies over 50% using acetate. Using a brewery waste stream as carbon source, an average power density of 0.27 W/m2 was generated with ∼60% COD removal at hydraulic retention time of 1.6 h. The decent performance of this reactor compared with other air-cathode MFCs at the similar scale and the alleviated hydraulic pressure on air-cathodes demonstrate the great potential of this design and operation for future MFC optimization and scaling up.
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Affiliation(s)
- Ningshengjie Gao
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR, 97331, United States
| | - Yanzhen Fan
- Waste2Watergy LLC, 3830 NW Boxwood Dr., Corvallis, OR, 97330, United States
| | - Fei Long
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR, 97331, United States
| | - Yu Qiu
- Department of Mechanical Engineering, Oregon State University, Corvallis, OR, 97331, United States
| | - Wil Geier
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR, 97331, United States
| | - Hong Liu
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis, OR, 97331, United States.
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Mishra S, Pirbadian S, Mondal AK, El-Naggar MY, Naaman R. Spin-Dependent Electron Transport through Bacterial Cell Surface Multiheme Electron Conduits. J Am Chem Soc 2019; 141:19198-19202. [DOI: 10.1021/jacs.9b09262] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Suryakant Mishra
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Sahand Pirbadian
- Department of Physics and Astronomy, University of Southern California, Los Angeles, California 90089, United States
| | - Amit Kumar Mondal
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Mohamed Y. El-Naggar
- Department of Physics and Astronomy, University of Southern California, Los Angeles, California 90089, United States
- Department of Chemistry, University of Southern California, Los Angeles, California 90089, United States
- Department of Biological Sciences, University of Southern California, Los Angeles, California 91030, United States
| | - Ron Naaman
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot 76100, Israel
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Cai W, Lesnik KL, Wade MJ, Heidrich ES, Wang Y, Liu H. Incorporating microbial community data with machine learning techniques to predict feed substrates in microbial fuel cells. Biosens Bioelectron 2019; 133:64-71. [PMID: 30909014 DOI: 10.1016/j.bios.2019.03.021] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2018] [Revised: 03/11/2019] [Accepted: 03/12/2019] [Indexed: 12/21/2022]
Abstract
The complicated interactions that occur in mixed-species biotechnologies, including biosensors, hinder chemical detection specificity. This lack of specificity limits applications in which biosensors may be deployed, such as those where an unknown feed substrate must be determined. The application of genomic data and well-developed data mining technologies can overcome these limitations and advance engineering development. In the present study, 69 samples with three different substrate types (acetate, carbohydrates and wastewater) collected from various laboratory environments were evaluated to determine the ability to identify feed substrates from the resultant microbial communities. Six machine learning algorithms with four different input variables were trained and evaluated on their ability to predict feed substrate from genomic datasets. The highest accuracies of 93 ± 6% and 92 ± 5% were obtained using NNET trained on datasets classified at the phylum and family taxonomic level, respectively. These accuracies corresponded to kappa values of 0.87 ± 0.10, 0.86 ± 0.09, respectively. Four out of six of the algorithms used maintained accuracies above 80% and kappa values higher than 0.66. Different sequencing method (Roche 454 or Illumina sequencing) did not affect the accuracies of all algorithms, except SVM at the phylum level. All algorithms trained on NMDS-compressed datasets obtained accuracies over 80%, while models trained on PCoA-compressed datasets presented a 10-30% reduction in accuracy. These results suggest that incorporating microbial community data with machine learning algorithms can be used for the prediction of feed substrate and for the potential improvement of MFC-based biosensor signal specificity, providing a new use of machine learning techniques that has substantial practical applications in biotechnological fields.
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Affiliation(s)
- Wenfang Cai
- Department of Environmental Science and Engineering, Xi'an Jiaotong University, Xi'an 710049, China; Department of Biological and Ecological Engineering, Oregon State University, Corvallis OR 97331, USA
| | - Keaton Larson Lesnik
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis OR 97331, USA
| | - Matthew J Wade
- School of Engineering, Newcastle University, Newcastle upon Tyne NE1 7RU, UK; Department of Mathematics & Statistics, McMaster University, Hamilton, Canada L8S 4K1
| | | | - Yunhai Wang
- Department of Environmental Science and Engineering, Xi'an Jiaotong University, Xi'an 710049, China.
| | - Hong Liu
- Department of Biological and Ecological Engineering, Oregon State University, Corvallis OR 97331, USA.
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