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Yin W, Lu T, Chen Z, Lu T, Ye H, Mao Y, Luo Y, Lu M, Zhu X, Yuan X, Rao Y, Wang Y. Quantitative trait locus mapping and candidate gene analysis for salt tolerance at bud stage in rice. FRONTIERS IN PLANT SCIENCE 2023; 13:1041081. [PMID: 36726666 PMCID: PMC9886062 DOI: 10.3389/fpls.2022.1041081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/10/2022] [Accepted: 12/28/2022] [Indexed: 06/18/2023]
Abstract
Soil salinization has a serious influence on rice yield and quality. How to enhance salt tolerance in rice is a topical issue. In this study, 120 recombinant inbred line populations were generated through nonstop multi-generation selfing using a male indica rice variety Huazhan (Oryza sativa L. subsp. indica cv. 'HZ') and a female variety of Nekken2 (Oryza sativa L. subsp. japonica cv. 'Nekken2') as the parents. Germination under 80 mM NaCl conditions was measured and analyzed, and quantitative trait locus (QTL) mapping was completed using a genetic map. A total of 16 salt-tolerance QTL ranges were detected at bud stage in rice, which were situated on chromosomes 3, 4, 6, 8, 9, 10, 11, and 12. The maximum limit of detection was 4.69. Moreover, the qST12.3 was narrowed to a 192 kb region on chromosome 12 using map-based cloning strategy. Statistical analysis of the expression levels of these candidate genes under different NaCl concentrations by qRT-PCR revealed that qST12.3 (LOC_Os12g25200) was significantly down-regulated with increasing NaCl concentration, and the expression level of the chlorine-transporter-encoding gene LOC_Os12g25200 in HZ was significantly higher than that of Nekken2 under 0 mM NaCl. Sequencing analysis of LOC_Os12g25200 promoter region indicated that the gene expression difference between parents may be due to eight base differences in the promoter region. Through QTL mining and analysis, a plurality of candidate genes related to salt tolerance in rice was obtained, and the results showed that LOC_Os12g25200 might negatively regulate salt tolerance in rice. The results provide the basis for further screening and cultivation of salt-tolerant rice varieties and have laid the foundation for elucidating further molecular regulation mechanisms of salt tolerance in rice.
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Affiliation(s)
- Wenjing Yin
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Tianqi Lu
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Zhengai Chen
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Tao Lu
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Hanfei Ye
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Yijian Mao
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China
| | - Yiting Luo
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Mei Lu
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Xudong Zhu
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China
| | - Xi Yuan
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Yuchun Rao
- College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua, Zhejiang, China
| | - Yuexing Wang
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China
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Kumar P, Singh S, Pranaw K, Kumar S, Singh B, Poria V. Bioinoculants as mitigators of multiple stresses: A ray of hope for agriculture in the darkness of climate change. Heliyon 2022; 8:e11269. [DOI: 10.1016/j.heliyon.2022.e11269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 05/04/2022] [Accepted: 10/21/2022] [Indexed: 11/28/2022] Open
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Li C, Lu C, Zou B, Yang M, Wu G, Wang P, Cheng Q, Wang Y, Zhong Q, Huang S, Huang T, He H, Bian J. Genome-Wide Association Study Reveals a Genetic Mechanism of Salt Tolerance Germinability in Rice ( Oryza sativa L.). FRONTIERS IN PLANT SCIENCE 2022; 13:934515. [PMID: 35909718 PMCID: PMC9335074 DOI: 10.3389/fpls.2022.934515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 06/16/2022] [Indexed: 06/15/2023]
Abstract
Salt stress is one of the factors that limits rice production, and an important task for researchers is to cultivate rice with strong salt tolerance. In this study, 211 rice accessions were used to determine salt tolerance germinability (STG) indices and conduct a genome-wide association study (GWAS) using 36,727 SNPs. The relative germination energy (RGE), relative germination index (RGI), relative vigor index (RVI), relative mean germination time (RMGT), relative shoot length (RSL), and relative root length (RRL) were used to determine the STG indices in rice. A total of 43 QTLs, including 15 for the RGE, 6 for the RGI, 7 for the RVI, 3 for the RMGT, 1 for the RSL, and 11 for the RRL, were identified on nine chromosome regions under 60 and 100 mM NaCl conditions. For these STG-related QTLs, 18 QTLs were co-localized with previous studies, and some characterized salt-tolerance genes, such as OsCOIN, OsHsp17.0, and OsDREB2A, are located in these QTL candidates. Among the 25 novel QTLs, qRGE60-1-2 co-localized with qRGI60-1-1 on chromosome 1, and qRGE60-3-1 and qRVI60-3-1 co-localized on chromosome 3. According to the RNA-seq database, 16 genes, including nine for qRGE60-1-2 (qRGI60-1-1) and seven for qRGE60-3-1 (qRVI60-3-1), were found to show significant differences in their expression levels between the control and salt treatments. Furthermore, the expression patterns of these differentially expressed genes were analyzed, and nine genes (five for qRGE60-1-2 and four for qRGE60-3-1) were highly expressed in embryos at the germination stage. Haplotype analysis of these nine genes showed that the rice varieties with elite haplotypes in the LOC_Os03g13560, LOC_Os03g13840, and LOC_Os03g14180 genes had high STG. GWAS validated the known genes underlying salt tolerance and identified novel loci that could enrich the current gene pool related to salt tolerance. The resources with high STG and significant loci identified in this study are potentially useful in breeding for salt tolerance.
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Affiliation(s)
- Caijing Li
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Changsheng Lu
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Baoli Zou
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Mengmeng Yang
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Guangliang Wu
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Peng Wang
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Qin Cheng
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Yanning Wang
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Qi Zhong
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Shiying Huang
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Tao Huang
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Haohua He
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
| | - Jianmin Bian
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Nanchang, China
- Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Nanchang, China
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Khan MN, Li Y, Fu C, Hu J, Chen L, Yan J, Khan Z, Wu H, Li Z. CeO 2 Nanoparticles Seed Priming Increases Salicylic Acid Level and ROS Scavenging Ability to Improve Rapeseed Salt Tolerance. GLOBAL CHALLENGES (HOBOKEN, NJ) 2022; 6:2200025. [PMID: 35860396 PMCID: PMC9284644 DOI: 10.1002/gch2.202200025] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 05/10/2022] [Indexed: 05/05/2023]
Abstract
Soil salinity is a major issue limiting efficient crop production. Seed priming with nanomaterials (nanopriming) is a cost-effective technology to improve seed germination under salinity; however, the underlying mechanisms still need to be explored. Here, polyacrylic acid coated nanoceria (cerium oxide nanoparticles) (PNC, 9.2 nm, -38.7 mV) are synthesized and characterized. The results show that under salinity, PNC priming significantly increases rapeseed shoot length (41.5%), root length (93%), and seedling dry weight (78%) compared to the no-nanoparticle (NNP) priming group. Confocal imaging results show that compared with NNP group, PNC priming significantly reduces reactive oxygen species (ROS) level in leaf (94.3% of H2O2, 56.4% of •O2 -) and root (38.4% of H2O2, 41.3% of •O2 -) of salt stressed rapeseed seedlings. Further, the results show that compared with the NNP group, PNC priming not only increases salicylic acid (SA) content in shoot (51.3%) and root (78.4%), but also upregulates the expression of SA biosynthesis related genes in salt stressed rapeseed. Overall, PNC nanopriming improved rapeseed salt tolerance is associated with both the increase of ROS scavenging ability and the increase of salicylic acid. The results add more information to understand the complexity of mechanisms behind nanoceria priming improved plant salt tolerance.
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Affiliation(s)
- Mohammad Nauman Khan
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
| | - Yanhui Li
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
| | - Chengcheng Fu
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
| | - Jin Hu
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
| | - Linlin Chen
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
| | - Jiasen Yan
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
| | - Zaid Khan
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
| | - Honghong Wu
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
- Hongshan LaboratoryWuhanHubei430070China
- College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100083China
| | - Zhaohu Li
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze RiverCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan430070China
- Hongshan LaboratoryWuhanHubei430070China
- College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100083China
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Chattha MU, Hassan MUU, Khan I, Nawaz M, Shah AN, Sattar A, Hashem M, Alamri S, Aslam MT, Alhaithloul HAS, Hassan MU, Qari SH. Hydrogen peroxide priming alleviates salinity induced toxic effect in maize by improving antioxidant defense system, ionic homeostasis, photosynthetic efficiency and hormonal crosstalk. Mol Biol Rep 2022; 49:5611-5624. [PMID: 35618939 DOI: 10.1007/s11033-022-07535-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2022] [Accepted: 04/26/2022] [Indexed: 11/29/2022]
Abstract
BACKGROUND Salinity stress (SS) is a serious detrimental factor for crop growth and productivity and its intensity it is continuously increasing which is posing serious threat to global food security. Hydrogen peroxide (H2O2) priming has emerged as an excellent strategy to mitigate the adverse impacts of SS. However, the role of H2O2 priming in mitigating the salinity induced toxicity is not fully explored. METHODS AND RESULTS Therefore, in this context the present study was conducted in complete randomized design (CRD) in factorial combination to determine the impact of H2O2 priming on germination, growth, physiological and biochemical traits, osmo-regulating compounds, hormonal balance and ionic homeostasis. The experiment was based on different levels of SS; control, 6 and 12 dS m-1 SS and priming treatments, control and H2O2 priming (2%). Salinity stress significantly reduced the growth, leaf water status (- 15.55%), calcium (Ca2+), potassium (K+) and magnesium (Mg2+) accumulation and increased malondialdehyde (MDA: + 29.95%), H2O2 (+ 21.48%) contents, osmo-regulating compounds (proline, soluble sugars), indole acetic acid (IAA), anti-oxidant activities (ascorbate peroxidase: APX, catalase: CAT, peroxidase: POD and ascorbic acid: AsA) and accumulation of sodium (Na+) and chloride (Cl-.). H2O2 priming effectively reduced the effects of SS on germination and growth and strengthen the anti-oxidant activities through reduced MDA (- 12.36%) and H2O2 (- 21.13%) and increasing leaf water status (16.90%), soluble protein (+ 71.32%), free amino acids (+ 26.41%), proline (+ 49.18%), soluble sugars (+ 71.02%), IAA (+ 57.59%) and gibberlic acid (GA) (+ 21.11%). Above all, H2O2 priming reduced the massive entry of noxious ions (Na+ and Cl-) while increased the entry of Ca2+, K+ and Mg2+ thus improved the plant performance under SS. CONCLUSION In conclusion H2O2 priming was proved beneficial for improving maize growth under SS thorough enhanced anti-oxidant activities, photosynthetic pigments, leaf water status, accumulation of osmo-regulating compounds, hormonal balance and ionic homeostasis.
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Affiliation(s)
| | - Muhammad Uzair Ul Hassan
- Department of Seed Science and Technology, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Imran Khan
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Muhammad Nawaz
- Department of Agricultural Engineering, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan, 64200, Punjab, Pakistan.
| | - Adnan Noor Shah
- Department of Agricultural Engineering, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan, 64200, Punjab, Pakistan.
| | - Abdul Sattar
- College of Agriculture, Bahauddin Zakariya University, Multan Bahadur Sub Campus, Layyah, Punjab, 31200, Pakistan
| | - Mohamed Hashem
- Department of Biology, College of Science, King Khalid University, Abha, 61413, Saudi Arabia.,Faculty of Science, Botany and Microbiology Department, Assiut University, Assiut, 71516, Egypt
| | - Saad Alamri
- Department of Biology, College of Science, King Khalid University, Abha, 61413, Saudi Arabia
| | | | | | - Muhammad Umair Hassan
- Research Center on Ecological Sciences, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Sameer H Qari
- Department of Biology, Al-Jumum University College, Umm Al-Qura University, Mecca, 21955, Saudi Arabia
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Ali AAM, Romdhane WB, Tarroum M, Al-Dakhil M, Al-Doss A, Alsadon AA, Hassairi A. Analysis of Salinity Tolerance in Tomato Introgression Lines Based on Morpho-Physiological and Molecular Traits. PLANTS 2021; 10:plants10122594. [PMID: 34961065 PMCID: PMC8704676 DOI: 10.3390/plants10122594] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 11/16/2021] [Accepted: 11/23/2021] [Indexed: 02/07/2023]
Abstract
The development of salt-tolerant tomato genotypes is a basic requirement to overcome the challenges of tomato production under salinity in the field or soil-free farming. Two groups of eight tomato introgression lines (ILs) each, were evaluated for salinity tolerance. Group-I and the group-II resulted from the following crosses respectively: Solanum lycopersicum cv-6203 × Solanum habrochaites and Solanum lycopersicum M82 × Solanum pennellii. Salt tolerance level was assessed based on a germination percentage under NaCl (0, 75, 100 mM) and in the vegetative stage using a hydroponic growing system (0, 120 mM NaCl). One line from group I (TA1648) and three lines from group II (IL2-1, IL2-3, and IL8-3) were shown to be salt-tolerant since their germination percentages were significantly higher at 75 and 100 mM NaCl than that of their respective cultivated parents cvE6203 and cvM82. Using the hydroponic system, IL TA1648 and IL 2-3 showed the highest value of plant growth traits and chlorophyll concentration. The expression level of eight salt-responsive genes in the leaves and roots of salt-tolerant ILs (TA1648 and IL 2-3) was estimated. Interestingly, SlSOS1, SlNHX2, SlNHX4, and SlERF4 genes were upregulated in leaves of both TA1648 and IL 2-3 genotypes under NaCl stress. While SlHKT1.1, SlNHX2, SlNHX4, and SlERF4 genes were upregulated under salt stress in the roots of both TA1648 and IL 2-3 genotypes. Furthermore, SlSOS2 and SlSOS3 genes were upregulated in TA1648 root and downregulated in IL 2-3. On the contrary, SlSOS1 and SlHKT1.2 genes were upregulated in the IL 2-3 root and downregulated in the TA1648 root. Monitoring of ILs revealed that some of them have inherited salt tolerance from S. habrochaites and S. pennellii genetic background. These ILs can be used in tomato breeding programs to develop salt-tolerant tomatoes or as rootstocks in grafting techniques under saline irrigation conditions.
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Affiliation(s)
- Ahmed Abdelrahim Mohamed Ali
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia; (A.A.M.A.); (W.B.R.); (M.A.-D.); (A.A.-D.); (A.A.A.)
| | - Walid Ben Romdhane
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia; (A.A.M.A.); (W.B.R.); (M.A.-D.); (A.A.-D.); (A.A.A.)
| | - Mohamed Tarroum
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 11451, Riyadh 11451, Saudi Arabia;
| | - Mohammed Al-Dakhil
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia; (A.A.M.A.); (W.B.R.); (M.A.-D.); (A.A.-D.); (A.A.A.)
- Natural Resources and Environmental Research Institute, King Abdulaziz City for Science and Technology, Riyadh 11442, Saudi Arabia
| | - Abdullah Al-Doss
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia; (A.A.M.A.); (W.B.R.); (M.A.-D.); (A.A.-D.); (A.A.A.)
| | - Abdullah A. Alsadon
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia; (A.A.M.A.); (W.B.R.); (M.A.-D.); (A.A.-D.); (A.A.A.)
| | - Afif Hassairi
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia; (A.A.M.A.); (W.B.R.); (M.A.-D.); (A.A.-D.); (A.A.A.)
- Centre of Biotechnology of Sfax, University of Sfax, B.P 1177, Sfax 3018, Tunisia
- Correspondence:
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Zeng P, Zhu P, Qian L, Qian X, Mi Y, Lin Z, Dong S, Aronsson H, Zhang H, Cheng J. Identification and fine mapping of qGR6.2, a novel locus controlling rice seed germination under salt stress. BMC PLANT BIOLOGY 2021; 21:36. [PMID: 33422012 PMCID: PMC7797128 DOI: 10.1186/s12870-020-02820-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Accepted: 12/25/2020] [Indexed: 05/20/2023]
Abstract
BACKGROUND Rice growth is frequently affected by salinity. When exposed to high salinity, rice seed germination and seedling establishment are significantly inhibited. With the promotion of direct-seeding in Asia, improving rice seed germination under salt stress is crucial for breeding. RESULTS In this study, an indica landrace Wujiaozhan (WJZ) was identified with high germinability under salt stress. A BC1F2 population derived from the crossing WJZ/Nip (japonica, Nipponbare)//Nip, was used to quantitative trait loci (QTL) mapping for the seed germination rate (GR) and germination index (GI) under H2O and 300 mM NaCl conditions. A total of 13 QTLs were identified, i.e. ten QTLs under H2O conditions and nine QTLs under salt conditions. Six QTLs, qGR6.1, qGR8.1, qGR8.2, qGR10.1, qGR10.2 and qGI10.1 were simultaneously identified under two conditions. Under salt conditions, three QTLs, qGR6.2, qGR10.1 and qGR10.2 for GR were identified at different time points during seed germination, which shared the same chromosomal region with qGI6.2, qGI10.1 and qGI10.2 for GI respectively. The qGR6.2 accounted for more than 20% of phenotypic variation under salt stress, as the major effective QTL. Furthermore, qGR6.2 was verified via the BC2F2 population and narrowed to a 65.9-kb region with eleven candidate genes predicted. Based on the microarray database, five candidate genes were found with high transcript abundances at the seed germination stage, of which LOC_Os06g10650 and LOC_Os06g10710 were differentially expressed after seed imbibition. RT-qPCR results showed the expression of LOC_Os06g10650 was significantly up-regulated in two parents with higher levels in WJZ than Nip during seed germination under salt conditions. Taken together, it suggests that LOC_Os06g10650, encoding tyrosine phosphatase family protein, might be the causal candidate gene for qGR6.2. CONCLUSIONS In this study, we identified 13 QTLs from a landrace WJZ that confer seed germination traits under H2O and salt conditions. A major salt-tolerance-specific QTL qGR6.2 was fine mapped to a 65.9-kb region. Our results provide information on the genetic basis of improving rice seed germination under salt stress by marker-assisted selection (MAS).
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Affiliation(s)
- Peng Zeng
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China
| | - Peiwen Zhu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China
| | - Luofeng Qian
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China
| | - Xumei Qian
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China
| | - Yuxin Mi
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China
| | - Zefeng Lin
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China
| | - Shinan Dong
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China
| | - Henrik Aronsson
- Department of Biological and Environment Sciences, University of Gothenburg, Gothenburg, Sweden
| | - Hongsheng Zhang
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China.
| | - Jinping Cheng
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Cyrus Tang Innovation Center for Crop Seed Industry, Nanjing Agricultural University, Nanjing, China.
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Zhang G, Zhou J, Peng Y, Tan Z, Li L, Yu L, Jin C, Fang S, Lu S, Guo L, Yao X. Genome-Wide Association Studies of Salt Tolerance at Seed Germination and Seedling Stages in Brassica napus. FRONTIERS IN PLANT SCIENCE 2021; 12:772708. [PMID: 35069628 PMCID: PMC8766642 DOI: 10.3389/fpls.2021.772708] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Accepted: 11/25/2021] [Indexed: 05/19/2023]
Abstract
Most crops are sensitive to salt stress, but their degree of susceptibility varies among species and cultivars. In order to understand the salt stress adaptability of Brassica napus to salt stress, we collected the phenotypic data of 505 B. napus accessions at the germination stage under 150 or 215 mM sodium chloride (NaCl) and at the seedling stage under 215 mM NaCl. Genome-wide association studies (GWAS) of 16 salt tolerance coefficients (STCs) were applied to investigate the genetic basis of salt stress tolerance of B. napus. In this study, we mapped 31 salts stress-related QTLs and identified 177 and 228 candidate genes related to salt stress tolerance were detected at germination and seedling stages, respectively. Overexpression of two candidate genes, BnCKX5 and BnERF3 overexpression, were found to increase the sensitivity to salt and mannitol stresses at the germination stage. This study demonstrated that it is a feasible method to dissect the genetic basis of salt stress tolerance at germination and seedling stages in B. napus by GWAS, which provides valuable loci for improving the salt stress tolerance of B. napus. Moreover, these candidate genes are rich genetic resources for the following exploration of molecular mechanisms in adaptation to salt stress in B. napus.
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Affiliation(s)
- Guofang Zhang
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
| | - Jinzhi Zhou
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
| | - Yan Peng
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
| | - Zengdong Tan
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
| | - Long Li
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
| | - Liangqian Yu
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
| | - Cheng Jin
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
| | - Shuai Fang
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
| | - Shaoping Lu
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
| | - Liang Guo
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
| | - Xuan Yao
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
- Hubei Hongshan Laboratory, Wuhan, China
- *Correspondence: Xuan Yao,
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9
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Uçgun K, Ferreira JFS, Liu X, da Silva Filho JB, Suarez DL, de Lacerda CF, Sandhu D. Germination and Growth of Spinach under Potassium Deficiency and Irrigation with High-Salinity Water. PLANTS 2020; 9:plants9121739. [PMID: 33317110 PMCID: PMC7763614 DOI: 10.3390/plants9121739] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/26/2020] [Revised: 12/02/2020] [Accepted: 12/06/2020] [Indexed: 11/16/2022]
Abstract
Information is scarce on the interaction of mineral deficiency and salinity. We evaluated two salt-tolerant spinach cultivars under potassium (K) doses (0.07, 0.15, 0.3, and 3.0 mmolc L-1) and saline irrigation (5, 30, 60, 120, and 160 mmolc L-1 NaCl) during germination and growth. There was no interaction between salinity and K. Salinity decreased germination percent (GP), not always significantly, and drastically reduced seedling biomass. 'Raccoon' significantly increased GP at 60 mmolc L-1 while 'Gazelle' maintained GP up to 60 or 120 mmolc L-1. After 50 days under saline irrigation, shoot biomass increased significantly at 30 and 60 mmolc L-1 at the lowest K dose but, in general, neither salinity nor K dose affected shoot biomass, suggesting that salinity supported plant growth at the most K-deficient dose. Salinity did not affect shoot N, P, or K but significantly reduced Ca, Mg, and S, although plants had no symptoms of salt toxicity or mineral deficiency. Although spinach seedlings are more sensitive to salt stress, plants adjusted to salinity with time. Potassium requirement for spinach growth was less than the current crop recommendation, allowing its cultivation with waters of moderate to high salinity without considerable reduction in yield, appearance, or mineral composition.
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Affiliation(s)
- Kadir Uçgun
- Department of Plant and Animal Production, Technical Sciences Vocational School, Karamanoğlu Mehmetbey University, Karaman 70200, Turkey;
| | - Jorge F. S. Ferreira
- US Salinity Laboratory (USDA-ARS), 450 W. Big Springs Rd., Riverside, CA 92507, USA; (X.L.); (D.L.S.); (D.S.)
- Correspondence:
| | - Xuan Liu
- US Salinity Laboratory (USDA-ARS), 450 W. Big Springs Rd., Riverside, CA 92507, USA; (X.L.); (D.L.S.); (D.S.)
| | - Jaime Barros da Silva Filho
- Departments of Microbiology and Plant Pathology, University of California Riverside, 900 University Ave., Riverside, CA 92521, USA;
| | - Donald L. Suarez
- US Salinity Laboratory (USDA-ARS), 450 W. Big Springs Rd., Riverside, CA 92507, USA; (X.L.); (D.L.S.); (D.S.)
| | - Claudivan F. de Lacerda
- Department of Agricultural Engineering, Federal University of Ceará, Fortaleza-CE 60450-760, Brazil;
| | - Devinder Sandhu
- US Salinity Laboratory (USDA-ARS), 450 W. Big Springs Rd., Riverside, CA 92507, USA; (X.L.); (D.L.S.); (D.S.)
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10
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Diaz-Baena M, Galvez-Valdivieso G, Delgado-Garcia E, Pineda M, Piedras P. Nuclease and ribonuclease activities in response to salt stress: Identification of PvRNS3, a T2/S-like ribonuclease induced in common bean radicles by salt stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 147:235-241. [PMID: 31881432 DOI: 10.1016/j.plaphy.2019.12.016] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Revised: 12/12/2019] [Accepted: 12/13/2019] [Indexed: 05/28/2023]
Abstract
The increase in soil salinization due to global climate change could cause large losses in crop productivity affecting, among other biological processes, to germination and seedling development. We have studied how salt stress affects nucleic acid degrading activities in radicles of common bean during seedling development. In radicles of common bean, a main nuclease of 37 kDa and two ribonucleases of 17 and 19 kDa were detected. Saline stress did not alter these three activities but induced a new ribonuclease of 16 kDa. All three ribonucleases are acidic enzymes that were inhibited by Zn. The 16 and 17 kDa ribonucleases are inhibited by guanilates. In the genome of common bean, we have identified 13 genes belonging to the T2 ribonuclease family and that are grouped in the 3 classes of T2 ribonucleases. The analysis of the expression of the 3 genes belonging to Class I (PvRNS1 to 3) and the unique gene from Class II (PvRNS4) in radicles showed that PvRNS3 is highly induced under salt stress.
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Affiliation(s)
- Mercedes Diaz-Baena
- Departamento de Botánica, Ecología y Fisiología Vegetal, Plants Molecular Physiology and Biotechnology Group, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Gregorio Galvez-Valdivieso
- Departamento de Botánica, Ecología y Fisiología Vegetal, Plants Molecular Physiology and Biotechnology Group, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Elena Delgado-Garcia
- Departamento de Botánica, Ecología y Fisiología Vegetal, Plants Molecular Physiology and Biotechnology Group, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Manuel Pineda
- Departamento de Botánica, Ecología y Fisiología Vegetal, Plants Molecular Physiology and Biotechnology Group, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain
| | - Pedro Piedras
- Departamento de Botánica, Ecología y Fisiología Vegetal, Plants Molecular Physiology and Biotechnology Group, Campus de Rabanales, Edif. Severo Ochoa, Universidad de Córdoba, Córdoba, Spain.
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11
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Tahjib-Ul-Arif M, Roy PR, Al Mamun Sohag A, Afrin S, Rady MM, Hossain MA. Exogenous Calcium Supplementation Improves Salinity Tolerance in BRRI Dhan28; a Salt-Susceptible High-Yielding Oryza Sativa Cultivar. ACTA ACUST UNITED AC 2019. [DOI: 10.1007/s12892-018-0098-0] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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12
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Yu J, Zhao W, Tong W, He Q, Yoon MY, Li FP, Choi B, Heo EB, Kim KW, Park YJ. A Genome-Wide Association Study Reveals Candidate Genes Related to Salt Tolerance in Rice ( Oryza sativa) at the Germination Stage. Int J Mol Sci 2018; 19:ijms19103145. [PMID: 30322083 PMCID: PMC6213974 DOI: 10.3390/ijms19103145] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Revised: 10/09/2018] [Accepted: 10/09/2018] [Indexed: 02/02/2023] Open
Abstract
Salt toxicity is the major factor limiting crop productivity in saline soils. In this paper, 295 accessions including a heuristic core set (137 accessions) and 158 bred varieties were re-sequenced and ~1.65 million SNPs/indels were used to perform a genome-wide association study (GWAS) of salt-tolerance-related phenotypes in rice during the germination stage. A total of 12 associated peaks distributed on seven chromosomes using a compressed mixed linear model were detected. Determined by linkage disequilibrium (LD) blocks analysis, we finally obtained a total of 79 candidate genes. By detecting the highly associated variations located inside the genic region that overlapped with the results of LD block analysis, we characterized 17 genes that may contribute to salt tolerance during the seed germination stage. At the same time, we conducted a haplotype analysis of the genes with functional variations together with phenotypic correlation and orthologous sequence analyses. Among these genes, OsMADS31, which is a MADS-box family transcription factor, had a down-regulated expression under the salt condition and it was predicted to be involved in the salt tolerance at the rice germination stage. Our study revealed some novel candidate genes and their substantial natural variations in the rice genome at the germination stage. The GWAS in rice at the germination stage would provide important resources for molecular breeding and functional analysis of the salt tolerance during rice germination.
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Affiliation(s)
- Jie Yu
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei 230036, China.
| | - Weiguo Zhao
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- School of Biotechnology, Jiangsu University of Science and Technology, Sibaidu, Zhenjiang, Jiangsu 212018, China.
| | - Wei Tong
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei 230036, China.
| | - Qiang He
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- National Key Facility for Crop Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
| | - Min-Young Yoon
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- Leader of Eco. Energy & Bio (LEEBCOR), 190-26 Hwangyeonggongwon-ro, Asan-si, Chungcheongnam-do 31529, Korea.
| | - Feng-Peng Li
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- Suzhou GENEWIZ Biotechnology Co. LTD, C3 218 Xinghu Road Suzhou Industrial Park, Suzhou 215123, China.
| | - Buung Choi
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- Chemical Safety Division, National Institute of Agricultural Sciences (NIAS), Wanju 55365, Korea.
| | - Eun-Beom Heo
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- Breeding & Research Institute, Koregon Co. LTD, Anseong Center 60-34, Gokcheon-gil, Bogae-Myeon, Anseong-Si, Gyeonggi-Do 17509, Korea.
| | - Kyu-Won Kim
- Center of Crop Breeding on Omics and Artificial Intelligence, Kongju National University, Yesan 32439, Korea.
| | - Yong-Jin Park
- Department of Plant Resources, College of Industrial Sciences, Kongju National University, Yesan 32439, Korea.
- Center of Crop Breeding on Omics and Artificial Intelligence, Kongju National University, Yesan 32439, Korea.
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13
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Oyiga BC, Sharma RC, Baum M, Ogbonnaya FC, Léon J, Ballvora A. Allelic variations and differential expressions detected at quantitative trait loci for salt stress tolerance in wheat. PLANT, CELL & ENVIRONMENT 2018; 41:919-935. [PMID: 28044314 DOI: 10.1111/pce.12898] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2016] [Revised: 12/23/2016] [Accepted: 12/24/2016] [Indexed: 05/08/2023]
Abstract
The increasing salinization of agricultural lands is a threat to global wheat production. Understanding of the mechanistic basis of salt tolerance (ST) is essential for developing breeding and selection strategies that would allow for increased wheat production under saline conditions to meet the increasing global demand. We used a set that consists of 150 internationally derived winter and facultative wheat cultivars genotyped with a 90K SNP chip and phenotyped for ST across three growth stages and for ionic (leaf K+ and Na+ contents) traits to dissect the genetic architecture regulating ST in wheat. Genome-wide association mapping revealed 187 Single Nucleotide Polymorphism (SNPs) (R2 = 3.00-30.67%), representing 37 quantitative trait loci (QTL), significantly associated with the ST traits. Of these, four QTL on 1BS, 2AL, 2BS and 3AL were associated with ST across the three growth stages and with the ionic traits. Novel QTL were also detected on 1BS and 1DL. Candidate genes linked to these polymorphisms were uncovered, and expression analyses were performed and validated on them under saline and non-saline conditions using transcriptomics and qRT-PCR data. Expressed sequence comparisons in contrasting ST wheat genotypes identified several non-synonymous/missense mutation sites that are contributory to the ST trait variations, indicating the biological relevance of these polymorphisms that can be exploited in breeding for ST in wheat.
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Affiliation(s)
- Benedict C Oyiga
- INRES Pflanzenzuchtung, Rheinische Friedrich-Wilhelms-Universitat, D-53115 Bonn, Germany
- Center for Development Research (ZEF), Rheinische Friedrich-Wilhelms-Universitat, D-53115 Bonn, Germany
| | - Ram C Sharma
- International Center for Agricultural Research in the Dry Areas (ICARDA), 6 Osiyo Street, Tashkent, 100000, Uzbekistan
| | - Michael Baum
- International Centre for Agricultural Research in the Dry Areas (ICARDA), PO Box 6299, Al Irfane, 10112, Rabat, Morocco
| | - Francis C Ogbonnaya
- International Centre for Agricultural Research in the Dry Areas (ICARDA), PO Box 6299, Al Irfane, 10112, Rabat, Morocco
- Grains Research and Development Corporation, PO Box 5367, Kingston, Australian Capital Territory, 2604, Australia
| | - Jens Léon
- INRES Pflanzenzuchtung, Rheinische Friedrich-Wilhelms-Universitat, D-53115 Bonn, Germany
| | - Agim Ballvora
- INRES Pflanzenzuchtung, Rheinische Friedrich-Wilhelms-Universitat, D-53115 Bonn, Germany
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14
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Gadelha CG, Miranda RDS, Alencar NLM, Costa JH, Prisco JT, Gomes-Filho E. Exogenous nitric oxide improves salt tolerance during establishment of Jatropha curcas seedlings by ameliorating oxidative damage and toxic ion accumulation. JOURNAL OF PLANT PHYSIOLOGY 2017; 212:69-79. [PMID: 28278442 DOI: 10.1016/j.jplph.2017.02.005] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2016] [Revised: 02/10/2017] [Accepted: 02/17/2017] [Indexed: 05/19/2023]
Abstract
Jatropha curcas is an oilseed species that is considered an excellent alternative energy source for fossil-based fuels for growing in arid and semiarid regions, where salinity is becoming a stringent problem to crop production. Our working hypothesis was that nitric oxide (NO) priming enhances salt tolerance of J. curcas during early seedling development. Under NaCl stress, seedlings arising from NO-treated seeds showed lower accumulation of Na+ and Cl- than those salinized seedlings only, which was consistent with a better growth for all analyzed time points. Also, although salinity promoted a significant increase in hydrogen peroxide (H2O2) content and membrane damage, the harmful effects were less aggressive in NO-primed seedlings. The lower oxidative damage in NO-primed stressed seedlings was attributed to operation of a powerful antioxidant system, including greater glutathione (GSH) and ascorbate (AsA) contents as well as catalase (CAT) and glutathione reductase (GR) enzyme activities in both endosperm and embryo axis. Priming with NO also was found to rapidly up-regulate the JcCAT1, JcCAT2, JcGR1 and JcGR2 gene expression in embryo axis, suggesting that NO-induced salt responses include functional and transcriptional regulations. Thus, NO almost completely abolished the deleterious salinity effects on reserve mobilization and seedling growth. In conclusion, NO priming improves salt tolerance of J. curcas during seedling establishment by inducing an effective antioxidant system and limiting toxic ion and reactive oxygen species (ROS) accumulation.
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Affiliation(s)
- Cibelle Gomes Gadelha
- Departamento de Bioquímica e Biologia Molecular and Instituto Nacional de Ciência e Tecnologia em Salinidade (INCTSal)/CNPq, Universidade Federal do Ceará, 60440-970, Fortaleza, Ceará, Brazil.
| | - Rafael de Souza Miranda
- Departamento de Bioquímica e Biologia Molecular and Instituto Nacional de Ciência e Tecnologia em Salinidade (INCTSal)/CNPq, Universidade Federal do Ceará, 60440-970, Fortaleza, Ceará, Brazil.
| | - Nara Lídia M Alencar
- Instituto Federal de Educação, Ciência e Tecnologia do Ceará, Crateús, Ce, Brazil.
| | - José Hélio Costa
- Departamento de Bioquímica e Biologia Molecular and Instituto Nacional de Ciência e Tecnologia em Salinidade (INCTSal)/CNPq, Universidade Federal do Ceará, 60440-970, Fortaleza, Ceará, Brazil.
| | - José Tarquinio Prisco
- Departamento de Bioquímica e Biologia Molecular and Instituto Nacional de Ciência e Tecnologia em Salinidade (INCTSal)/CNPq, Universidade Federal do Ceará, 60440-970, Fortaleza, Ceará, Brazil.
| | - Enéas Gomes-Filho
- Departamento de Bioquímica e Biologia Molecular and Instituto Nacional de Ciência e Tecnologia em Salinidade (INCTSal)/CNPq, Universidade Federal do Ceará, 60440-970, Fortaleza, Ceará, Brazil.
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15
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Parihar P, Singh S, Singh R, Singh VP, Prasad SM. Effect of salinity stress on plants and its tolerance strategies: a review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:4056-75. [PMID: 25398215 DOI: 10.1007/s11356-014-3739-1] [Citation(s) in RCA: 381] [Impact Index Per Article: 42.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2014] [Accepted: 10/17/2014] [Indexed: 04/16/2023]
Abstract
The environmental stress is a major area of scientific concern because it constraints plant as well as crop productivity. This situation has been further worsened by anthropogenic activities. Therefore, there is a much scientific saddle on researchers to enhance crop productivity under environmental stress in order to cope with the increasing food demands. The abiotic stresses such as salinity, drought, cold, and heat negatively influence the survival, biomass production and yield of staple food crops. According to an estimate of FAO, over 6% of the world's land is affected by salinity. Thus, salinity stress appears to be a major constraint to plant and crop productivity. Here, we review our understanding of salinity impact on various aspects of plant metabolism and its tolerance strategies in plants.
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Affiliation(s)
- Parul Parihar
- Ranjan Plant Physiology and Biochemistry Laboratory, Department of Botany, University of Allahabad, Allahabad, 211002, India
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16
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Lee OR, Pulla RK, Kim YJ, Balusamy SRD, Yang DC. Expression and stress tolerance of PR10 genes from Panax ginseng C. A. Meyer. Mol Biol Rep 2011; 39:2365-74. [PMID: 21667108 DOI: 10.1007/s11033-011-0987-8] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2011] [Accepted: 05/27/2011] [Indexed: 11/25/2022]
Abstract
Pathogenesis-related 10 protein families (PgPR10 proteins) from ginseng are reported to have ribonuclease activity, conferring defense-related resistance against various stresses. Homology-based PCR using PgPR10-2 specific primers allowed for the isolation of two additional PgPR10 genes. PgPR10-1 is identical to the previously reported ribonuclease 1, while PgPR10-3 is a newly-discovered protein, suggesting that the PgPR10s are a multi-gene family. Differential organ-specific transcripts of PgPR10-1 and PgPR10-2 in the flower bud and root, respectively, indicate that there are tissue-specific functional roles for this gene family. Overexpression of PgPR10-2 in Arabidopsis conferred longer root length and a tolerant growth phenotype on NaCl-supplemented media. Further changes in transcriptional levels against sets of abiotic stressors suggest similar functional roles of PgPR10-1 in the root and predominantly in the flower organ based on its higher expression levels. Overall, this suggests that the manipulation of PgPR10 genes in plants can be used as valuable tool to enhance its physiological status.
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Affiliation(s)
- Ok Ran Lee
- Department of Oriental Medicinal Materials and Processing, College of Life Science, Kyung Hee University, Suwon 449-701, Korea.
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