1
|
Wang H, Xu T, Li Y, Gao R, Tao X, Song J, Li C, Li Q. Comparative transcriptome analysis reveals the potential mechanism of GA 3-induced dormancy release in Suaeda glauca black seeds. FRONTIERS IN PLANT SCIENCE 2024; 15:1354141. [PMID: 38919815 PMCID: PMC11197467 DOI: 10.3389/fpls.2024.1354141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 05/22/2024] [Indexed: 06/27/2024]
Abstract
Suaeda glauca Bunge produces dimorphic seeds on the same plant, with brown seeds displaying non-dormant characteristics and black seeds exhibiting intermediate physiological dormancy traits. Previous studies have shown that black seeds have a very low germination rate under natural conditions, but exogenous GA3 effectively enhanced the germination rate of black seeds. However, the physiological and molecular mechanisms underlying the effects of GA3 on S. glauca black seeds are still unclear. In this study, transcriptomic profiles of seeds at different germination stages with and without GA3 treatment were analyzed and compared, and the TTF, H2O2, O2 -, starch, and soluble sugar contents of the corresponding seed samples were determined. The results indicated that exogenous GA3 treatment significantly increased seed vigor, H2O2, and O2 - contents but decreased starch and soluble sugar contents of S. glauca black seeds during seed dormancy release. RNA-seq results showed that a total of 1136 DEGs were identified in three comparison groups and were involved mainly in plant hormone signal transduction, diterpenoid biosynthesis, flavonoid biosynthesis, phenylpropanoid biosynthesis, and carbohydrate metabolism pathway. Among them, the DEGs related to diterpenoid biosynthesis (SgGA3ox1, SgKAO and SgGA2ox8) and ABA signal transduction (SgPP2Cs) could play important roles during seed dormancy release. Most genes involved in phenylpropanoid biosynthesis were activated under GA3 treatment conditions, especially many SgPER genes encoding peroxidase. In addition, exogenous GA3 treatment also significantly enhanced the expression of genes involved in flavonoid synthesis, which might be beneficial to seed dormancy release. In accordance with the decline in starch and soluble sugar contents, 15 genes involved in carbohydrate metabolism were significantly up-regulated during GA3-induced dormancy release, such as SgBAM, SgHXK2, and SgAGLU, etc. In a word, exogenous GA3 effectively increased the germination rate and seed vigor of S. glauca black seeds by mediating the metabolic process or signal transduction of plant hormones, phenylpropanoid and flavonoid biosynthesis, and carbohydrate metabolism processes. Our results provide novel insights into the transcriptional regulation mechanism of exogenous GA3 on the dormancy release of S. glauca black seeds. The candidate genes identified in this study may be further studied and used to enrich our knowledge of seed dormancy and germination.
Collapse
Affiliation(s)
- Hongfei Wang
- The Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Science, Liaoning Normal University, Dalian, China
| | - Tianjiao Xu
- The Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Science, Liaoning Normal University, Dalian, China
| | - Yongjia Li
- The Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Science, Liaoning Normal University, Dalian, China
| | - Rui Gao
- Dandong Forestry and Grassland Development Service Center, Dandong, China
| | - Xuelin Tao
- The Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Science, Liaoning Normal University, Dalian, China
| | - Jieqiong Song
- The Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Science, Liaoning Normal University, Dalian, China
| | - Changping Li
- The Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Science, Liaoning Normal University, Dalian, China
| | - Qiuli Li
- The Key Laboratory of Plant Biotechnology of Liaoning Province, School of Life Science, Liaoning Normal University, Dalian, China
| |
Collapse
|
2
|
Jang HA, Ku SM, Kim JH, Jung SM, Lee J, Lee YS, Han YS, Jo YH. In silico identification and expression analyses of peroxidases in Tenebrio molitor. Genes Genomics 2024; 46:601-611. [PMID: 38546934 DOI: 10.1007/s13258-024-01498-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Accepted: 01/24/2024] [Indexed: 04/18/2024]
Abstract
Human advancements in agriculture, urbanization, and industrialization have led to various forms of environmental pollution, including heavy metal pollution. Insects, as highly adaptable organisms, can survive under various environmental stresses, which induce oxidative damage and impair antioxidant systems. To investigate the peroxidase (POX) family in Tenebrio molitor, we characterized two POXs, namely TmPOX-iso1 and TmPOX-iso2. The full-length cDNA sequences of TmPox-iso1 and TmPox-iso2 respectively consisted of an open reading frame of 1815 bp encoding 605 amino acids and an open reading frame of 2229 bp encoding 743 amino acids. TmPOX-iso1 and TmPOX-iso2 homologs were found in five distinct insect orders. In the phylogenetic tree analysis, TmPOX-iso1 was clustered with the predicted POX protein of T. castaneum, and TmPOX-iso2 was clustered with the POX precursor protein of T. castaneum. During development, the highest expression level of TmPox-iso1 was observed in the pre-pupal stage, while that of TmPox-iso2 expression were observed in the pre-pupal and 4-day pupal stages. TmPox-iso1 was primarily expressed in the early and late larval gut, while TmPox-iso2 mRNA expression was higher in the fat bodies and Malpighian tubules. In response to cadmium chloride treatment, TmPox-iso1 expression increased at 3 hours and then declined until 24 hours, while in the zinc chloride-treated group, TmPox-iso1 expression peaked 24 hours after the treatment. Both treated groups showed increases in TmPox-iso2 expression 24 hours after the treatments.
Collapse
Affiliation(s)
- Ho Am Jang
- Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea
- Korea Native Animal Resources Utilization Convergence Research Institute (KNAR), Soonchunhyang University, Asan, Chungnam, Republic of Korea
| | - Sung Min Ku
- Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea
| | - Jae Hui Kim
- Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea
| | - Sang Mok Jung
- Research Institute for Basic Science, Soonchunhyang University, Asan, Chungnam, Republic of Korea
| | - Jongdae Lee
- Department of Environmental Health Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea
| | - Yong Seok Lee
- Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea
- Korea Native Animal Resources Utilization Convergence Research Institute (KNAR), Soonchunhyang University, Asan, Chungnam, Republic of Korea
| | - Yeon Soo Han
- Department of Applied Biology, Institute of Environmentally-Friendly Agriculture (IEFA), College of Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea
| | - Yong Hun Jo
- Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea.
- Korea Native Animal Resources Utilization Convergence Research Institute (KNAR), Soonchunhyang University, Asan, Chungnam, Republic of Korea.
| |
Collapse
|
3
|
Freitas CDT, Costa JH, Germano TA, de O Rocha R, Ramos MV, Bezerra LP. Class III plant peroxidases: From classification to physiological functions. Int J Biol Macromol 2024; 263:130306. [PMID: 38387641 DOI: 10.1016/j.ijbiomac.2024.130306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 02/14/2024] [Accepted: 02/18/2024] [Indexed: 02/24/2024]
Abstract
Peroxidases (EC 1.11.1.7) are involved in a wide range of physiological processes, hence their broad distribution across biological systems. These proteins can be classified as haem or non-haem enzymes. According to the RedOxiBase database, haem peroxidases are approximately 84 % of all known peroxidase enzymes. Class III plant peroxidases are haem-enzymes that share similar three-dimensional structures and a common catalytic mechanism for hydrogen peroxide degradation. They exist as large multigene families and are involved in metabolizing Reactive Oxygen Species (ROS), hormone synthesis and decomposition, fruit growth, defense, and cell wall synthesis and maintenance. As a result, plant peroxidases gained attention in research and became one of the most extensively studied groups of enzymes. This review provides an update on the database, classification, phylogeny, mechanism of action, structure, and physiological functions of class III plant peroxidases.
Collapse
Affiliation(s)
- Cleverson D T Freitas
- Department of Biochemistry and Molecular Biology, Federal University of Ceará, Campus do Pici, Fortaleza, Ceará CEP 60451-970, Brazil.
| | - José H Costa
- Department of Biochemistry and Molecular Biology, Federal University of Ceará, Campus do Pici, Fortaleza, Ceará CEP 60451-970, Brazil
| | - Thais A Germano
- Department of Biochemistry and Molecular Biology, Federal University of Ceará, Campus do Pici, Fortaleza, Ceará CEP 60451-970, Brazil
| | - Raquel de O Rocha
- Department of Plant Pathology and Ecology, The Connecticut Agricultural Experiment Station, New Haven 06511, CT, USA
| | - Márcio V Ramos
- Department of Biochemistry and Molecular Biology, Federal University of Ceará, Campus do Pici, Fortaleza, Ceará CEP 60451-970, Brazil
| | - Leandro P Bezerra
- Department of Biochemistry and Molecular Biology, Federal University of Ceará, Campus do Pici, Fortaleza, Ceará CEP 60451-970, Brazil
| |
Collapse
|
4
|
Setty J, Samant SB, Yadav MK, Manjubala M, Pandurangam V. Beneficial effects of bio-fabricated selenium nanoparticles as seed nanopriming agent on seed germination in rice (Oryza sativa L.). Sci Rep 2023; 13:22349. [PMID: 38102184 PMCID: PMC10724239 DOI: 10.1038/s41598-023-49621-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Accepted: 12/10/2023] [Indexed: 12/17/2023] Open
Abstract
Climate change and increasing population pressure have put the agriculture sector in an arduous situation. With increasing demand for agricultural production overuse of inputs have accentuated the negative impact on environment. Hence, sustainable agriculture is gaining prominence in recent times with an emphasis on judicious and optimum use of resources. The field of nanotechnology can immensely help in achieving sustainability in agriculture at various levels. Use of nutrients and plant protection chemicals in nano-form can increase their efficacy even at reduced doses thus decreasing their pernicious impact. Seed priming is one of the important agronomic practices with widely reported positive impacts on germination, seedling growth and pathogen resistance. In the current study, the effect and efficacy of selenium nanoparticles synthesized using phyto-extracts as a seed priming agent is studied. This nanopriming enhanced the germination, hastened the seedling emergence and growth with an increase in seedling vigour and nutrient status. This eco-friendly and economical method of synthesizing nanoparticles of various nutrient minerals can optimize the resource use thus helping in sustainable agriculture by reducing environment damage without compromising on efficacy.
Collapse
Affiliation(s)
- Jyotsna Setty
- Department of Plant Physiology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, 221005, Uttar Pradesh, India.
| | - Sanjib Bal Samant
- Department of Plant Physiology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, 221005, Uttar Pradesh, India
| | - Mayank Kumar Yadav
- Department of Mechanical and Industrial Engineering, Tallinn University of Technology, Tallinn, Estonia
| | - M Manjubala
- Department of Farm Engineering and Agricultural Statistics, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, 221005, Uttar Pradesh, India
| | - Vijai Pandurangam
- Department of Plant Physiology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, 221005, Uttar Pradesh, India.
| |
Collapse
|
5
|
Ren Y, Shen F, Liu J, Liang W, Zhang C, Lian T, Jiang L. Application of Methionine Increases the Germination Rate of Maize Seeds by Triggering Multiple Phenylpropanoid Biosynthetic Genes at Transcript Levels. PLANTS (BASEL, SWITZERLAND) 2023; 12:3802. [PMID: 38005700 PMCID: PMC10675280 DOI: 10.3390/plants12223802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Revised: 11/01/2023] [Accepted: 11/06/2023] [Indexed: 11/26/2023]
Abstract
Methionine is an essential amino acid that initiates protein synthesis and serves as a substrate for various chemical reactions. Methionine metabolism plays an important role in Arabidopsis seed germination, but how methionine works in seed germination of maize has not been elucidated. We compared the changes in germination rate, the contents of methionine and folates, and transcriptional levels using transcriptome analysis under water or exogenous methionine treatment. The results indicate that the application of methionine increases seed germination rate (95% versus 70%), leading to significant differences in the content of methionine at 36 h, which brought the rapid increase forward by 12 h in the embryo and endosperm. Transcriptome analysis shows that methionine mainly affects the proliferation and differentiation of cells in the embryo, and the degradation of storage substances and signal transduction in the endosperm. In particular, multiple phenylpropanoid biosynthetic genes were triggered upon methionine treatment during germination. These results provide a theoretical foundation for promoting maize seed germination and serve as a valuable theoretical resource for seed priming strategies.
Collapse
Affiliation(s)
- Ying Ren
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China; (Y.R.); (F.S.); (J.L.); (W.L.); (C.Z.)
| | - Fengyuan Shen
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China; (Y.R.); (F.S.); (J.L.); (W.L.); (C.Z.)
| | - Ji’an Liu
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China; (Y.R.); (F.S.); (J.L.); (W.L.); (C.Z.)
| | - Wenguang Liang
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China; (Y.R.); (F.S.); (J.L.); (W.L.); (C.Z.)
| | - Chunyi Zhang
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China; (Y.R.); (F.S.); (J.L.); (W.L.); (C.Z.)
- Sanya Institute, Hainan Academy of Agricultural Sciences, Sanya 572000, China
| | - Tong Lian
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China; (Y.R.); (F.S.); (J.L.); (W.L.); (C.Z.)
- Sanya Institute, Hainan Academy of Agricultural Sciences, Sanya 572000, China
- Hainan Yazhou Bay Seed Laboratory, Sanya 572000, China
| | - Ling Jiang
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China; (Y.R.); (F.S.); (J.L.); (W.L.); (C.Z.)
| |
Collapse
|
6
|
Joshi S, Pandey BR, Rosewarne G. Characterization of field pea ( Pisum sativum) resistance against Peyronellaea pinodes and Didymella pinodella that cause ascochyta blight. FRONTIERS IN PLANT SCIENCE 2022; 13:976375. [PMID: 36352888 PMCID: PMC9637924 DOI: 10.3389/fpls.2022.976375] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Accepted: 09/15/2022] [Indexed: 06/16/2023]
Abstract
Ascochyta blight is one of the most destructive diseases in field pea and is caused by either individual or combined infections by the necrotrophic pathogens Peyronellaea pinodes, Didymella pinodella, Ascochyta pisi and Ascochyta koolunga. Knowledge of disease epidemiology will help in understanding the resistance mechanisms, which, in turn, is beneficial in breeding for disease resistance. A pool of breeding lines and cultivars were inoculated with P. pinodes and D. pinodella to study the resistance responses and to characterize the underlying resistance reactions. In general, phenotypic analysis of controlled environment disease assays showed clear differential responses among genotypes against the two pathogens. The released variety PBA Wharton and the breeding line 11HP302-12HO-1 showed high levels of resistance against both pathogens whereas PBA Twilight and 10HP249-11HO-7 showed differential responses between the two pathogens, showing higher resistance against D. pinodella as compared to P. pinodes. OZP1604 had high infection levels against both pathogens. Histochemical analysis of leaves using diamino benzidine (DAB) showed the more resistant genotypes had lower accumulation of hydrogen peroxide compared to susceptible genotypes. The digital images of DAB staining were analyzed using ImageJ, an image analysis software. The image analysis results showed that quantification of leaf disease infection through image analysis is a useful tool in estimating the level of cell death in biotic stress studies. The qRT-PCR analysis of defense related genes showed that partially resistant genotypes had significantly higher expression of PsOXII and Pshmm6 in the P. pinodes treated plants, whereas expression of PsOXII, PsAPX1, PsCHS3 and PsOPR1 increased in partially resistant plants inoculated with D. pinodella. The differential timing and intensity of expression of a range of genes between resistant lines challenged with the same pathogen, or challenged with different pathogens, suggests that there are multiple pathways that restrict infection in this complex pathogen-host interaction. The combination of phenotypic, histochemical and molecular approaches provide a comprehensive picture of the infection process and resistance mechanism of pea plants against these pathogens.
Collapse
|
7
|
Sun X, Chen J, Fan W, Liu S, Kamruzzaman M. Production of Reactive Oxygen Species via Nanobubble Water Improves Radish Seed Water Absorption and the Expression of Aquaporin Genes. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:11724-11731. [PMID: 36103666 DOI: 10.1021/acs.langmuir.2c01860] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Nanobubbles (NBs) stimulate seed germination; however, the mechanism of the promotion effect of NBs remains unclear. The impact of NBs on seed water absorption was investigated; we subsequently studied the genes associated with the response of radish seeds to NB water and used RNA sequencing to generate their expression profiles, especially those of aquaporin genes. NB water significantly promoted germination. The times at which 50% of the germinating seeds achieved germination (T50) for the submerged radish seeds in NB and control water were 11.6 and 17.4 h, respectively. NB water-germinated radish seeds showed a water uptake rate coefficient that was 15% higher than that of those germinated in control water. Through GO enrichment and cluster analyses, it was evident that NB water significantly increased the level of expression of the genes associated with the following activities: oxidoreductase, peroxidase, and antioxidant. Our results demonstrated that NB water increases the water uptake rate of radish seeds via two mechanisms. The NB water-produced exogenous hydroxyl radical (•OH) increases the seed coat's water permeability and enhances cell wall loosening, and NB water increases the aquaporin gene expression level of radish seeds.
Collapse
Affiliation(s)
- Xiaohong Sun
- Institute of Biotechnology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
| | - Jingrao Chen
- Institute of Biotechnology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
| | - Wenhong Fan
- Department of Environmental Science and Engineering, School of Space and Environment, Beihang University, Beijing 100191, China
| | - Shu Liu
- Department of Environmental Science and Engineering, School of Space and Environment, Beihang University, Beijing 100191, China
| | - Mohammed Kamruzzaman
- Department of Agricultural and Biological Engineering, University of Illinois at Urbana-Champaign, 1304 West Pennsylvania Avenue, Urbana, Illinois 61801, United States
| |
Collapse
|
8
|
Cheng M, Guo Y, Liu Q, Nan S, Xue Y, Wei C, Zhang Y, Luan F, Zhang X, Li H. H2O2 and Ca2+ Signaling Crosstalk Counteracts ABA to Induce Seed Germination. Antioxidants (Basel) 2022; 11:antiox11081594. [PMID: 36009313 PMCID: PMC9404710 DOI: 10.3390/antiox11081594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 08/13/2022] [Accepted: 08/16/2022] [Indexed: 11/16/2022] Open
Abstract
Seed germination is a critical stage and the first step in the plant’s life cycle. H2O2 and Ca2+ act as important signal molecules in regulating plant growth and development and in providing defense against numerous stresses; however, their crosstalk in modulating seed germination remains largely unaddressed. In the current study, we report that H2O2 and Ca2+ counteracted abscisic acid (ABA) to induce seed germination in melon and Arabidopsis by modulating ABA and gibberellic acid (GA3) balance. H2O2 treatment induced a Ca2+ influx in melon seeds accompanied by the upregulation of cyclic nucleotide-gated ion channel (CNGC) 20, which encodes a plasma membrane Ca2+-permeable channel. However, the inhibition of cytoplasmic free Ca2+ elevation in the melon seeds and Arabidopsis mutant atcngc20 compromised H2O2-induced germination under ABA stress. CaCl2 induced H2O2 accumulation accompanied by the upregulation of respiratory burst oxidase homologue (RBOH) D and RBOHF in melon seeds with ABA pretreatment. However, inhibition of H2O2 accumulation in the melon seeds and Arabidopsis mutant atrbohd and atrbohf abolished CaCl2-induced germination under ABA stress. The current study reveals a novel mechanism in which H2O2 and Ca2+ signaling crosstalk offsets ABA to induce seed germination. H2O2 induces Ca2+ influx, which in turn increases H2O2 accumulation, thus forming a reciprocal positive-regulatory loop to maintain a balance between ABA and GA3 and promote seed germination under ABA stress.
Collapse
Affiliation(s)
- Mengjie Cheng
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Yanliang Guo
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Qing Liu
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Sanwa Nan
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Yuxing Xue
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Chunhua Wei
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Yong Zhang
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Feishi Luan
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150000, China
| | - Xian Zhang
- College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Hao Li
- College of Horticulture, Northwest A&F University, Yangling 712100, China
- Correspondence:
| |
Collapse
|
9
|
Enhanced SA and Ca 2+ signaling results in PCD-mediated spontaneous leaf necrosis in wheat mutant wsl. Mol Genet Genomics 2021; 296:1249-1262. [PMID: 34426888 DOI: 10.1007/s00438-021-01811-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Accepted: 08/07/2021] [Indexed: 10/20/2022]
Abstract
Leaf is the major photosynthesis organ and the key source of wheat (Triticum aestivum L.) grain. Spotted leaf (spl) mutant is a kind of leaf lesion mimic mutants (LMMs) in plants, which is an ideal material for studying the mechanisms of leaf development. In this study, we report the leaf abnormal development molecular mechanism of a spl mutant named white stripe leaf (wsl) derived from wheat cultivar Guomai 301 (WT). Histochemical observation indicated that the leaf mesophyll cells of the wsl were destroyed in the necrosis regions. To explore the molecular regulatory network of the leaf development in mutant wsl, we employed transcriptome analysis, histochemistry, quantitative real-time PCR (qRT-PCR), and observations of the key metabolites and photosynthesis parameters. Compared to WT, the expressions of the chlorophyll synthesis and photosynthesis-related homeotic genes were repressed; many genes in the WRKY transcription factor (TF) families were highly expressed; the salicylic acid (SA) and Ca2+ signal transductions were enhanced in wsl. Both the chlorophyll contents and the photosynthesis rate were lower in wsl. The contents of SA and reactive oxygen species (ROS) were significantly higher, and the leaf rust resistance was enhanced in wsl. Based on the experimental data, a primary molecular regulatory model for leaf development in wsl was established. The results indicated that the SA accumulation and enhanced Ca2+ signaling led to programmed cell death (PCD), and ultimately resulted in spontaneous leaf necrosis of wsl. These results laid a solid foundation for further research on the molecular mechanism of leaf development in wheat.
Collapse
|
10
|
Rajkumar MS, Garg R, Jain M. Genome resequencing reveals DNA polymorphisms associated with seed size/weight determination in chickpea. Genomics 2021; 113:1458-1468. [PMID: 33744344 DOI: 10.1016/j.ygeno.2021.03.020] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 02/23/2021] [Accepted: 03/14/2021] [Indexed: 12/14/2022]
Abstract
Crop productivity in legumes is determined by number and size/weight of seeds. To understand the genetic basis of seed size/weight in chickpea, we performed genome resequencing of 13 small- and 5 large-seeded genotypes using Illumina platform. Single nucleotide polymorphisms (SNPs) and insertions/deletions (InDels) differentiating small- and large-seeded genotypes were identified. A total of 17,902 SNPs and 2594 InDels located in promoter and/or coding regions that may contribute to seed size/weight were detected. Of these, 266 SNPs showed significant association with seed size/weight trait. Twenty-three genes including those involved in cell growth/division, encoding transcription factors and located within QTLs associated with seed size/weight harbored SNPs within transcription factor binding motif(s) and/or coding region. The non-synonymous SNPs were found to affect the mutational sensitivity and stability of the encoded proteins. Overall, we provided a high-quality SNP map for large-scale genotyping applications and identified candidate genes that determine seed size/weight in chickpea.
Collapse
Affiliation(s)
- Mohan Singh Rajkumar
- School of Computational & Integrative Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Rohini Garg
- Department of Life Sciences, School of Natural Sciences, Shiv Nadar University, Gautam Buddha Nagar, Uttar Pradesh 201314, India
| | - Mukesh Jain
- School of Computational & Integrative Sciences, Jawaharlal Nehru University, New Delhi 110067, India.
| |
Collapse
|
11
|
Farooq MA, Zhang X, Zafar MM, Ma W, Zhao J. Roles of Reactive Oxygen Species and Mitochondria in Seed Germination. FRONTIERS IN PLANT SCIENCE 2021; 12:781734. [PMID: 34956279 PMCID: PMC8695494 DOI: 10.3389/fpls.2021.781734] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Accepted: 11/18/2021] [Indexed: 05/14/2023]
Abstract
Seed germination is crucial for the life cycle of plants and maximum crop production. This critical developmental step is regulated by diverse endogenous [hormones, reactive oxygen species (ROS)] and exogenous (light, temperature) factors. Reactive oxygen species promote the release of seed dormancy by biomolecules oxidation, testa weakening and endosperm decay. Reactive oxygen species modulate metabolic and hormone signaling pathways that induce and maintain seed dormancy and germination. Endosperm provides nutrients and senses environmental signals to regulate the growth of the embryo by secreting timely signals. The growing energy demand of the developing embryo and endosperm is fulfilled by functional mitochondria. Mitochondrial matrix-localized heat shock protein GhHSP24.7 controls seed germination in a temperature-dependent manner. In this review, we summarize comprehensive view of biochemical and molecular mechanisms, which coordinately control seed germination. We also discuss that the accurate and optimized coordination of ROS, mitochondria, heat shock proteins is required to permit testa rupture and subsequent germination.
Collapse
Affiliation(s)
- Muhammad Awais Farooq
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Vegetable Germplasm Innovation and Utilization of Hebei, Collaborative Innovation Center of Vegetable Industry in Hebei, College of Horticulture, Hebei Agricultural University, Baoding, China
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Xiaomeng Zhang
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Vegetable Germplasm Innovation and Utilization of Hebei, Collaborative Innovation Center of Vegetable Industry in Hebei, College of Horticulture, Hebei Agricultural University, Baoding, China
| | | | - Wei Ma
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Vegetable Germplasm Innovation and Utilization of Hebei, Collaborative Innovation Center of Vegetable Industry in Hebei, College of Horticulture, Hebei Agricultural University, Baoding, China
- *Correspondence: Wei Ma,
| | - Jianjun Zhao
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Vegetable Germplasm Innovation and Utilization of Hebei, Collaborative Innovation Center of Vegetable Industry in Hebei, College of Horticulture, Hebei Agricultural University, Baoding, China
- Jianjun Zhao,
| |
Collapse
|
12
|
The signalling role of ROS in the regulation of seed germination and dormancy. Biochem J 2020; 476:3019-3032. [PMID: 31657442 DOI: 10.1042/bcj20190159] [Citation(s) in RCA: 119] [Impact Index Per Article: 29.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Revised: 10/04/2019] [Accepted: 10/04/2019] [Indexed: 12/11/2022]
Abstract
Reactive oxygen species (ROS) are versatile compounds which can have toxic or signalling effects in a wide range living organisms, including seeds. They have been reported to play a pivotal role in the regulation of seed germination and dormancy but their mechanisms of action are still far from being fully understood. In this review, we sum-up the major findings that have been carried out this last decade in this field of research and which altogether shed a new light on the signalling roles of ROS in seed physiology. ROS participate in dormancy release during seed dry storage through the direct oxidation of a subset of biomolecules. During seed imbibition, the controlled generation of ROS is involved in the perception and transduction of environmental conditions that control germination. When these conditions are permissive for germination, ROS levels are maintained at a level which triggers cellular events associated with germination, such as hormone signalling. Here we propose that the spatiotemporal regulation of ROS production acts in concert with hormone signalling to regulate the cellular events involved in cell expansion associated with germination.
Collapse
|
13
|
Jin T, Sun Y, Zhao R, Shan Z, Gai J, Li Y. Overexpression of Peroxidase Gene GsPRX9 Confers Salt Tolerance in Soybean. Int J Mol Sci 2019; 20:E3745. [PMID: 31370221 PMCID: PMC6695911 DOI: 10.3390/ijms20153745] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Revised: 07/20/2019] [Accepted: 07/24/2019] [Indexed: 12/15/2022] Open
Abstract
Peroxidases play prominent roles in antioxidant responses and stress tolerance in plants; however, their functions in soybean tolerance to salt stress remain unclear. Here, we investigated the role of a peroxidase gene from the wild soybean (Glycine soja), GsPRX9, in soybean tolerance to salt stress. GsPRX9 gene expression was induced by salt treatment in the roots of both salt-tolerant and -sensitive soybean varieties, and its relative expression level in the roots of salt-tolerant soybean varieties showed a significantly higher increase than in salt-sensitive varieties after NaCl treatment, suggesting its possible role in soybean response to salt stress. GsPRX9-overexpressing yeast (strains of INVSc1 and G19) grew better than the control under salt and H2O2 stress, and GsPRX9-overexpressing soybean composite plants showed higher shoot fresh weight and leaf relative water content than control plants after NaCl treatment. Moreover, the GsPRX9-overexpressing soybean hairy roots had higher root fresh weight, primary root length, activities of peroxidase and superoxide dismutase, and glutathione level, but lower H2O2 content than those in control roots under salt stress. These findings suggest that the overexpression of the GsPRX9 gene enhanced the salt tolerance and antioxidant response in soybean. This study would provide new insights into the role of peroxidase in plant tolerance to salt stress.
Collapse
Affiliation(s)
- Ting Jin
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybeans (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China
| | - Yangyang Sun
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybeans (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China
| | - Ranran Zhao
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybeans (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China
| | - Zhong Shan
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybeans (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China
| | - Junyi Gai
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybeans (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China
| | - Yan Li
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Key Laboratory for Biology and Genetic Improvement of Soybeans (General, Ministry of Agriculture), Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China.
| |
Collapse
|
14
|
De Bont L, Naim E, Arbelet-Bonnin D, Xia Q, Palm E, Meimoun P, Mancuso S, El-Maarouf-Bouteau H, Bouteau F. Activation of plasma membrane H +-ATPases participates in dormancy alleviation in sunflower seeds. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 280:408-415. [PMID: 30824019 DOI: 10.1016/j.plantsci.2018.12.015] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2018] [Revised: 11/19/2018] [Accepted: 12/14/2018] [Indexed: 06/09/2023]
Abstract
Using various inhibitors and scavengers we took advantage of the size of sunflower (Helianthus annuus) seeds to investigate in vivo the effects of hormones, namely abscisic acid (ABA) and ethylene (ET), and reactive oxygen species (ROS) on the polarization of dormant (D) and non-dormant (ND) embryonic seed cells using microelectrodes. Our data show that D and ND seed cells present different polarization likely due to the regulation of plasma membrane (PM) H+-ATPase activity. The data obtained after addition of hormones or ROS scavengers further suggest that ABA dependent inhibition of PM H+-ATPases could participate in dormancy maintenance and that ET-and ROS-dependent PM H+-ATPase stimulation could participate in dormancy release in sunflower seeds.
Collapse
Affiliation(s)
| | - Elissa Naim
- Sorbonne Université, UMR7622-IBPS, Paris, France
| | - Delphine Arbelet-Bonnin
- Univ Paris Diderot, Laboratoire Interdisciplinaire des Energies de Demain (LIED), Paris, France
| | - Qiong Xia
- Sorbonne Université, UMR7622-IBPS, Paris, France
| | - Emily Palm
- LINV-DiSPAA, Department of Agri-Food and Environmental Science, University of Florence, Sesto Fiorentino, FI, Italy
| | - Patrice Meimoun
- Sorbonne Université, UMR7622-IBPS, Paris, France; Univ Paris Diderot, Laboratoire Interdisciplinaire des Energies de Demain (LIED), Paris, France
| | - Stefano Mancuso
- LINV-DiSPAA, Department of Agri-Food and Environmental Science, University of Florence, Sesto Fiorentino, FI, Italy; Univ Paris Diderot, Paris Interdisciplinary Energy Research Institute (PIERI), Paris, France
| | | | - François Bouteau
- Univ Paris Diderot, Laboratoire Interdisciplinaire des Energies de Demain (LIED), Paris, France; LINV-DiSPAA, Department of Agri-Food and Environmental Science, University of Florence, Sesto Fiorentino, FI, Italy.
| |
Collapse
|
15
|
Majumdar A, Kar RK. Orchestration of Cu-Zn SOD and class III peroxidase with upstream interplay between NADPH oxidase and PM H +-ATPase mediates root growth in Vigna radiata (L.) Wilczek. JOURNAL OF PLANT PHYSIOLOGY 2019; 232:248-256. [PMID: 30537611 DOI: 10.1016/j.jplph.2018.11.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Revised: 11/01/2018] [Accepted: 11/02/2018] [Indexed: 06/09/2023]
Abstract
Post-germination plant growth depends on the regulation of reactive oxygen species (ROS) metabolism, spatiotemporal pH changes and Ca+2 homeostasis, whose potential integration has been studied during Vigna radiata (L.) Wilczek root growth. The dissipation of proton (H+) gradients across plasma membrane (PM) by CCCP (protonophore) and the inhibition of PM H+-ATPase by sodium orthovanadate repressed SOD (superoxide dismutase; EC 1.15.1.1) activity as revealed by spectrophotometric and native PAGE assay results. Similar results derived from treatment with DPI (NADPH oxidase inhibitor) and Tiron (O2- scavenger) denote a functional synchronization of SOD, PM H+-ATPase and NOX, as the latter two enzymes are substrate sources for SOD (H+ and O2-, respectively) and are involved in a feed-forward loop. After SOD inactivation, a decline in apoplastic H2O2 content was observed in each treatment group, emerging as a possible cause of the diminution of class III peroxidase (Prx; EC 1.11.1.7), which utilizes H2O2 as a substrate. In agreement with the pivotal role of Ca+2 in PM H+-ATPase and NOX activation, Ca+2 homeostasis antagonists, i.e., LaCl3 (Ca+2 channel inhibitor), EGTA (Ca+2 chelator) and LiCl (endosomal Ca+2 release blocker), inhibited both SOD and Prx. Finally, a drastic reduction in apoplastic OH (hydroxyl radical) concentrations (induced by each treatment, leading to Prx inhibition) was observed via fluorometric analysis. A consequential inhibition of root growth observed under each treatment denotes the importance of the orchestrated functioning of PM H+-ATPase, NOX, Cu-Zn SOD and Prx during root growth. A working model demonstrating postulated enzymatic synchronization with an intervening role of Ca+2 is proposed.
Collapse
Affiliation(s)
- Arkajo Majumdar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, 731235, West Bengal, India; Department of Botany, City College, 102/1 Raja Rammohan Sarani, Kolkata, 700009, West Bengal, India
| | - Rup Kumar Kar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, 731235, West Bengal, India.
| |
Collapse
|
16
|
Majumdar A, Kar RK. Congruence between PM H +-ATPase and NADPH oxidase during root growth: a necessary probability. PROTOPLASMA 2018; 255:1129-1137. [PMID: 29435645 DOI: 10.1007/s00709-018-1217-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2017] [Accepted: 01/26/2018] [Indexed: 05/12/2023]
Abstract
Plasma membrane (PM) H+-ATPase and NADPH oxidase (NOX) are two key enzymes responsible for cell wall relaxation during elongation growth through apoplastic acidification and production of ˙OH radical via O2˙-, respectively. Our experiments revealed a putative feed-forward loop between these enzymes in growing roots of Vigna radiata (L.) Wilczek seedlings. Thus, NOX activity was found to be dependent on proton gradient generated across PM by H+-ATPase as evident from pharmacological experiments using carbonyl cyanide m-chlorophenylhydrazone (CCCP; protonophore) and sodium ortho-vanadate (PM H+-ATPase inhibitor). Conversely, H+-ATPase activity retarded in response to different ROS scavengers [CuCl2, N, N' -dimethylthiourea (DMTU) and catalase] and NOX inhibitors [ZnCl2 and diphenyleneiodonium (DPI)], while H2O2 promoted PM H+-ATPase activity at lower concentrations. Repressing effects of Ca+2 antagonists (La+3 and EGTA) on the activity of both the enzymes indicate its possible mediation. Since, unlike animal NOX, the plant versions do not possess proton channel activity, harmonized functioning of PM H+-ATPase and NOX appears to be justified. Plasma membrane NADPH oxidase and H+-ATPase are functionally synchronized and they work cooperatively to maintain the membrane electrical balance while mediating plant cell growth through wall relaxation.
Collapse
Affiliation(s)
- Arkajo Majumdar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, West Bengal, 731235, India
- Department of Botany, City College, 102/1 Raja Rammohan Sarani, Kolkata, West Bengal, 700009, India
| | - Rup Kumar Kar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, West Bengal, 731235, India.
| |
Collapse
|
17
|
Das S, Kar RK. Abscisic acid mediated differential growth responses of root and shoot of Vigna radiata (L.) Wilczek seedlings under water stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018; 123:213-221. [PMID: 29248679 DOI: 10.1016/j.plaphy.2017.12.016] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2017] [Revised: 11/30/2017] [Accepted: 12/07/2017] [Indexed: 06/07/2023]
Abstract
Water stress is a common problem in Indian agriculture and recent global climate change has aggravated this problem further. Plants have an adaptive response to water scarcity as reflected in differential root and shoot growth. In case of Vigna radiata seedlings we have observed earlier promotion of root growth while inhibition of shoot (hypocotyl) growth under mild water stress, which is probably mediated by ABA. However, the exact mechanism of ABA action is far from clear. The present study attempts to elucidate the action of ABA through apoplastic reactive oxygen species (ROS) and its impact upon antioxidant defence system during the growth of root and shoot under water stress. Thus promotion of root growth by application of exogenous ABA (10 μM) and mild water stress (ψ -0.5 MPa) may be correlated with enhanced apoplastic ROS production possibly by activating plasma membrane located NADPH oxidase (NOX) enzyme. On the contrary, in hypocotyls where growth was rather inhibited by application of water stress or ABA, neither NOX activity nor ROS accumulation was significantly detected upon these treatments. Overall activity of antioxidant enzymes [superoxide dismutase (SOD, EC 1.15.1.1), peroxidase (POX, EC 1.11.1.7), ascorbate peroxidase (APX, EC 1.11.1.1) and catalase (CAT, EC 1.11.1.6)] was high and somewhat promoted by ABA and water stress treatment in roots compared to hypocotyls. A possible ROS-mediated role of ABA in promoting growth and antioxidant activity in roots under water stress has been proposed.
Collapse
Affiliation(s)
- Satyajit Das
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan 731 235, West Bengal, India
| | - Rup Kumar Kar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan 731 235, West Bengal, India.
| |
Collapse
|
18
|
Liu S, Oshita S, Kawabata S, Thuyet DQ. Nanobubble Water's Promotion Effect of Barley (Hordeum vulgare L.) Sprouts Supported by RNA-Seq Analysis. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2017; 33:12478-12486. [PMID: 28965413 DOI: 10.1021/acs.langmuir.7b02290] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The physiological promotion effect of nanobubble (NB) water on living organisms is still a poorly understood phenomenon which was discovered 1 decade ago. Here, we analyzed the barley (Hordeum vulgare L.) embryo transcriptome following the exposure to NB water and low-concentration hydrogen peroxide (H2O2) using RNA-Seq. We found that 349 genes were differentially expressed after 24 h exposure to NB water and 97 genes were differentially expressed after exposure to H2O2 solution. Gene ontology enrichment and cluster analyses revealed that NB water induced expression of genes related to cell division and cell wall loosening. RNA-Seq, quantitative real-time polymerase chain reaction, and enzyme activity measurements all pointed to gene-encoding peroxidases as a major factor responsible for the effects of physiological enhancement due to NB water. The exogenous hydroxyl radical (•OH) produced by NB water significantly increased the expression of genes related to peroxidase and NADPH, thus leading to an increased endogenous superoxide anion (O2•-) inside the barley seed. Appropriately, low concentrations of exogenously added reactive oxygen species (ROS) and endogenous ROS played important roles in plant growth and development. When ROS levels were low, the endogenous ROS was eliminated by ascorbate peroxidase and other peroxidases instead of activating the catalase and superoxidase dismutase. This data set will serve as the foundation for a system biology approach to understand physiological promotion effects of NB water on living organisms.
Collapse
Affiliation(s)
- Shu Liu
- Department of Environmental Science and Engineering, School of Space and Environment, Beihang University , Beijing 10191, China
- Graduate School of Agricultural & Life Sciences, The University of Tokyo , Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan
| | - Seiichi Oshita
- Graduate School of Agricultural & Life Sciences, The University of Tokyo , Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan
| | - Saneyuki Kawabata
- Graduate School of Agricultural & Life Sciences, The University of Tokyo , Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan
| | - Dang Quoc Thuyet
- Graduate School of Agricultural & Life Sciences, The University of Tokyo , Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan
| |
Collapse
|
19
|
Singh KL, Mukherjee A, Kar RK. Early axis growth during seed germination is gravitropic and mediated by ROS and calcium. JOURNAL OF PLANT PHYSIOLOGY 2017; 216:181-187. [PMID: 28704703 DOI: 10.1016/j.jplph.2017.07.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2017] [Revised: 06/28/2017] [Accepted: 07/02/2017] [Indexed: 06/07/2023]
Abstract
In plant establishment, seed germination is characterized by the emergence of a radicle for secured anchorage to the soil and nutrient and water uptake. Early growth of germinating axes appears to be gravisensitive, and the regulation of this process is largely uncharacterized, particularly in case of epigeally germinating species. Our previous work on the germination of Vigna radiata seeds demonstrated the role of apoplastic reactive oxygen species (ROS) in germination-associated axis growth. This study attempts to explore a possibly similar role of ROS in the gravitropic bending of germinating axes. Pharmacological and histological studies correlated the curvature growth of the axis (due to cell elongation in the cortical region of the upper side) with apoplastic superoxide accumulation. The superoxide was produced by diphenylene iodonium chloride (DPI)-insensitive NADH oxidase, which was different from the DPI-sensitive NADPH oxidase active in the apical elongation zone of the radicle. This NADH oxidase was differentially controlled by IAA, and its activation required influx of apoplastic Ca2+. This study shows that the early axis growth in germinating seeds is gravisensitive, which is distinct spatially as well as temporally from the elongation growth of the axis (radicle) and controlled by auxin and cytosolic Ca2+ through NADH oxidase-dependent ROS production.
Collapse
Affiliation(s)
- Khangembam Lenin Singh
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan 731235, West Bengal, India
| | - Anindita Mukherjee
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan 731235, West Bengal, India
| | - Rup Kumar Kar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan 731235, West Bengal, India.
| |
Collapse
|
20
|
Zhang X, Liu X, Zhang D, Tang H, Sun B, Li C, Hao L, Liu C, Li Y, Shi Y, Xie X, Song Y, Wang T, Li Y. Genome-wide identification of gene expression in contrasting maize inbred lines under field drought conditions reveals the significance of transcription factors in drought tolerance. PLoS One 2017; 12:e0179477. [PMID: 28700592 PMCID: PMC5507481 DOI: 10.1371/journal.pone.0179477] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Accepted: 05/31/2017] [Indexed: 11/19/2022] Open
Abstract
Drought is a major threat to maize growth and production. Understanding the molecular regulation network of drought tolerance in maize is of great importance. In this study, two maize inbred lines with contrasting drought tolerance were tested in the field under natural soil drought and well-watered conditions. In addition, the transcriptomes of their leaves was analyzed by RNA-Seq. In total, 555 and 2,558 genes were detected to specifically respond to drought in the tolerant and the sensitive line, respectively, with a more positive regulation tendency in the tolerant genotype. Furthermore, 4,700, 4,748, 4,403 and 4,288 genes showed differential expression between the two lines under moderate drought, severe drought and their well-watered controls, respectively. Transcription factors were enriched in both genotypic differentially expressed genes and specifically responsive genes of the tolerant line. It was speculated that the genotype-specific response of 20 transcription factors in the tolerance line and the sustained genotypically differential expression of 22 transcription factors might enhance tolerance to drought in maize. Our results provide new insight into maize drought tolerance-related regulation systems and provide gene resources for subsequent studies and drought tolerance improvement.
Collapse
Affiliation(s)
- Xiaojing Zhang
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xuyang Liu
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Dengfeng Zhang
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Huaijun Tang
- Institute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China
| | - Baocheng Sun
- Institute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China
| | - Chunhui Li
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Luyang Hao
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Cheng Liu
- Institute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China
| | - Yongxiang Li
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yunsu Shi
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xiaoqing Xie
- Institute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China
| | - Yanchun Song
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Tianyu Wang
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yu Li
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| |
Collapse
|
21
|
Majumdar A, Kar RK. Integrated role of ROS and Ca +2 in blue light-induced chloroplast avoidance movement in leaves of Hydrilla verticillata (L.f.) Royle. PROTOPLASMA 2016; 253:1529-1539. [PMID: 26573536 DOI: 10.1007/s00709-015-0911-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2015] [Accepted: 11/11/2015] [Indexed: 06/05/2023]
Abstract
Directional chloroplast photorelocation is a major physio-biochemical mechanism that allows these organelles to realign themselves intracellularly in response to the intensity of the incident light as an adaptive response. Signaling processes involved in blue light (BL)-dependent chloroplast movements were investigated in Hydrilla verticillata (L.f.) Royle leaves. Treatments with antagonists of actin filaments [2,3,5-triiodobenzoic acid (TIBA)] and microtubules (oryzalin) revealed that actin filaments, but not microtubules, play a pivotal role in chloroplast movement. Involvement of reactive oxygen species (ROS) in controlling chloroplast avoidance movement has been demonstrated, as exogenous H2O2 not only accelerated chloroplast avoidance but also could induce chloroplast avoidance even in weak blue light (WBL). Further support came from experiments with different ROS scavengers, i.e., dimethylthiourea (DMTU), KI, and CuCl2, which inhibited chloroplast avoidance, and from ROS localization using specific stains. Such avoidance was also partially inhibited by ZnCl2, an inhibitor of NADPH oxidase (NOX) as well as 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), a photosynthetic electron transport chain (ETC) inhibitor at PS II. However, methyl viologen (MV), a PS I ETC inhibitor, rather accelerated avoidance response. Exogenous calcium (Ca+2) induced avoidance even in WBL while inhibited chloroplast accumulation partially. On the other hand, chloroplast movements (both accumulation and avoidance) were blocked by Ca+2 antagonists, La3+ (inhibitor of plasma membrane Ca+2 channel) and ethylene glycol-bis(2-aminoethylether)-N,N,N',N'-tetraacetic acid (EGTA, Ca+2 chelator) while LiCl that affects Ca+2 release from endosomal compartments did not show any effect. A model on integrated role of ROS and Ca+2 (influx from apolastic space) in actin-mediated chloroplast avoidance has been proposed.
Collapse
Affiliation(s)
- Arkajo Majumdar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, 731235, West Bengal, India
| | - Rup Kumar Kar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, 731235, West Bengal, India.
| |
Collapse
|