Successful city dwellers: a comparative study of the ecological characteristics of urban birds in the Western Palearctic

Flight initiation distance and bird tolerance to humans in rural and urban habitats

Urbanization induces homogenization and changes the behavioural patterns of various bird species, thereby facilitating coexistence and prompting adaptations to disturbances in urban environments. However, there is limited research on the influence of how urbanization affects bird tolerance towards humans, especially in developing sub-tropical regions such as Nepal, which is undergoing rapid unplanned urbanization. This study identified the flight initiation distance (FID) as a proxy for assessing bird tolerance. We focused on evaluating the human tolerance levels of 33 bird species using their FIDs in urban and rural habitats within Kathmandu Valley, a rapidly urbanizing city in South Asia. We found higher tolerance in urban birds than in their rural conspecifics, which varies mainly with dietary guild and season. The positive impact on FID was associated with time of the day and body size, while a negative association was observed with flock size, mean population density of humans and interaction between body size and elevation. Our study highlights the increased tolerance level of birds in urban areas, probably owing to habituation, and emphasizes the imperative need to investigate the potential adverse effect on urban bird population owing to this increased tolerance level.

Constitutive innate immune defenses in relation to urbanization and population density in an urban bird, the feral pigeon Columba livia domestica

Urbanization processes modulate the immunological challenges faced by animals. Urban habitat transformations reshape pathogen diversity and abundance, while high population density-common in urban exploiter species-promotes disease transmission. Responses to urbanization may include adaptive adjustments of constitutive innate immune defenses (e.g. complement system and natural antibodies [NAbs]), which serve as first-line protection against infections. Here, we investigated associations of habitat urbanization and host population density with complement and NAbs in an urban bird, the feral pigeon Columba livia domestica. To do so, we employed the hemolysis-hemagglutination assay to analyze nearly 200 plasma samples collected across urbanization and pigeon population density gradients in five major cities in Poland. We found a negative association between urbanization score and hemagglutination (i.e. NAbs activity), but not hemolysis (i.e. complement activity), indicating either immunosuppression or adaptive downregulation of this immune defense in highly transformed urban landscape. Population density was not significantly related to either immune parameter, providing no evidence for density-dependent modulation of immune defenses. At the same time, there was a negative association of hemolysis with condition (scaled mass index), suggesting resource allocation trade-offs or contrasting effects of the urban environment on immune defenses and body condition. The results demonstrate that habitat structure can be an important factor shaping the immune defenses of the feral pigeon, although these associations were not mediated by variation in population density. Our study highlights the complexity of the links between immune defenses in wildlife and urbanization and reinforces the need for comprehensive ecoimmunological studies on urban animals.

Urbanization reduces diversity, simplifies community and filter bird species based on their functional traits in a tropical city

Understanding how organisms are coping with major changes imposed by urban intensification is a complex task. In fact, our understanding of the impacts of urbanization on biodiversity is scarce in the global south compared to the north. In this study, we evaluated how bird communities are affected by impact of urban intensification in a tropical city. Thus, we assessed whether increased urban intensification 1) jeopardizes bird diversity (taking into account taxonomic-TD, phylogenetic-PD, and functional-FD dimensions), 2) drives changes in bird community composition and enables the detection of indicator species of such impact, and 3) leads to changes in bird functional traits linked to reproduction, resource acquisition, and survival. We found that urban intensification has a direct impact on the bird community, reducing all three types of diversity. Communities in areas of greater urban intensity are represented by fewer species, and these species are PD and FD less distinct. In addition, we detected at least ten species of areas of lower urban intensity that proved to be more sensitive to urban intensification. With regard to bird traits, we found no significant responses from reproductive, habitat use and feeding variables. Body weight and tail length were the only variables with significant results, with higher urbanization intensity areas selecting for species with lower weights and longer tails. Given the global biodiversity loss we are observing, this information can guide urban managers and planners in designing urban landscapes to maintain biodiversity in cities.

Smarter in the city? Lizards from urban and semi-natural habitats do not differ in a cognitive task in two syntopic species

Urbanization occurs at a global scale, imposing dramatic and abrupt environmental changes that lead to biodiversity loss. Yet, some animal species can handle these changes, and thrive in such artificial environments. One possible explanation is that urban individuals are equipped with better cognitive abilities, but most studies have focused on birds and mammals and yielded varied results. Reptiles have received much less attention, despite some lizard species being common city dwellers. The Italian wall lizard, Podarcis siculus, and the common wall lizard, Podarcis muralis, are two successful lizards in anthropogenic habitats that thrive in urban locations. To test for differences in a cognitive skill between urban and semi-natural environments, we investigated inhibitory control through a detour task in syntopic populations of the two species, across 249 lizards that were tested in partially artificial field settings. Sophisticated inhibitory control is considered essential for higher degrees of cognitive flexibility and other higher-level cognitive abilities. In this task, we confronted lizards with a transparent barrier, separating them from a desired shelter area that they could only reach by controlling their impulse to go straight and instead detour the barrier. We found no differences between lizards in urban and semi-natural environments, nor between species, but females overall performed better than males. Moreover, 48% of the lizards in our study did not perform a correct trial in any of the 5 trials, hinting at the difficulty of the task for these species. This study is among the first to address lizard cognition, through their inhibitory control, as a potential explanation for success in cities and highlights one should be careful with assuming that urban animals generally have enhanced cognitive performance, as it might be taxa, task, or condition dependent.

Urban rooftops near sports pitches provide a safe haven for a declining shorebird

Urbanisation has contributed to a severe decline in biodiversity worldwide. However, urban ecosystems can also play an important role in the conservation of threatened species, including ground-nesting birds such as the Eurasian Oystercatcher (Haematopus ostralegus). While the coastal populations of this shorebird have declined sharply, there is growing evidence that pairs nesting on urban flat roofs have high reproductive success. However, the reasons for rooftop nesting and the species' habitat use in urban areas remain poorly understood. In this study, we investigate the territory selection and foraging behaviour of the Eurasian Oystercatcher in the city of Münster (NW Germany). All nesting sites were located on flat roofs (N = 24), most of which were covered with gravel. Overall, reproductive success was high. This was mainly because the roofs provided protection from mammalian predators, leading to increased nest and chick survival. Moreover, breeding performance in the study area was favoured by the proximity of sports pitches. According to our observations, they provided a large amount of easily accessible prey throughout the breeding season. Overall, our study highlights that the reproductive success of the Eurasian Oystercatcher in urban environments is highly dependent on both safe nesting sites on flat roofs and the availability of suitable foraging habitats. Although our study suggests that breeding in urban areas can be beneficial for the model organism, the species' strong territory fidelity makes it very sensitive to the rapid environmental changes occurring in cities. The value of urban ecosystems for bird conservation should therefore be better integrated into urban planning and management.

Urbanization alters the song propagation of two human-commensal songbird species

Urban expansion has increased pollution, including both physical (e.g., exhaust, litter) and sensory (e.g., anthropogenic noise) components. Urban avian species tend to increase the frequency and/or amplitude of songs to reduce masking by low-frequency noise. Nevertheless, song propagation to the receiver can also be constrained by the environment. We know relatively little about how this propagation may be altered across species that (1) vary in song complexity and (2) inhabit areas along an urbanization gradient. We investigated differences in song amplitude, attenuation, and active space, or the maximum distance a receiver can detect a signal, in two human-commensal species: the house sparrow (Passer domesticus) and house finch (Haemorhous mexicanus). We described urbanization both discretely and quantitatively to investigate the habitat characteristics most responsible for propagation changes. We found mixed support for our hypothesis of urban-specific degradation of songs. Urban songs propagated with higher amplitude; however, urban song fidelity was species-specific and showed lowered active space for urban house finch songs. Taken together, our results suggest that urban environments may constrain the propagation of vocal signals in species-specific manners. Ultimately, this has implications for the ability of urban birds to communicate with potential mates or kin.

Geographic variations in eco-evolutionary factors governing urban birds: The case of university campuses in China

Urbanization alters natural habitats, restructures biotic communities and serves as a filter for selecting species from regional species pools. However, empirical evidence of the specific traits that allow species to persist in urban areas yields mixed results. More importantly, it remains unclear which traits are widespread for species utilizing urban spaces (urban utilizers) and which are environment-dependent traits. Using 745 bird species from 287 university/institute campuses in 74 cities and their species pools across China, we tested whether species that occur in urban areas are correlated with regards to their biological (body mass, beak shape, flight capacity and clutch size), ecological (diet diversity, niche width and habitat breadth), behavioural (foraging innovation) and evolutionary (diversification rate) attributes. We used Bayesian phylogenetic generalized linear mixed models to disentangle the relative roles of these predictors further, and to determine the extent to which the effects of these predictors varied among different cities. We found that urban birds were more phylogenetically clustered than expected by chance, and were generally characterized by a larger habitat breadth, faster diversification rate, more behavioural innovation and smaller body size. Notably, the relative effects of the attributes in explaining urban bird communities varied with city temperature and elevation, indicating that the filters used to determine urban species were environment dependent. We conclude that, while urban birds are typically small-sized, generalists, innovative and rapidly diversifying, the key traits that allow them to thrive vary spatially, depending on the climatic and topographic conditions of the city. These findings emphasize the importance of studying species communities within specific cities to better understand the contextual dependencies of key traits that are filtered by urban environments.

The effects of urban life on animal immunity: Adaptations and constraints

Land transformation, including urbanization, is a dominant form of anthropogenic change to the global environment at the dawn of the Anthropocene epoch. More and more species are brought into direct contact with humans, being either required to develop broad-scale adaptations to urban environment or filtered out from urbanized areas. While behavioural or physiological adaptations are at the forefront of urban biology research, there is accumulating evidence for divergent pathogen pressure across urbanization gradients, requiring adjustments in host immune function. At the same time, host immunity may be constrained by unfavourable components of an urban environment, such as poor-quality food resources, disturbance, or pollution. Here, I reviewed existing evidence for adaptations and constrains in the immune system of urban animals, focusing on the recent implementation of metabarcoding, genomic, transcriptomic, and epigenomic approaches in urban biology research. I show that spatial variation in pathogen pressure across urban and non-urban landscapes is highly complex and may be context-dependent, but there is solid evidence for pathogen-driven immunostimulation in urban-dwelling animals. I also show that genes coding for molecules directly involved in interactions with pathogens are the prime candidates for immunogenetic adaptations to urban life. Evidence emerging from landscape genomics and transcriptomics show that immune adaptations to urban life may have a polygenic nature, but immune traits may not be among the key biological functions experiencing broad-scale microevolutionary changes in response to urbanization. Finally, I provided recommendations for future research, including i) a better integration of different 'omic' approaches to obtain a more complete picture of immune adaptations to urban life in non-model animal taxa, ii) quantification of fitness landscapes for immune phenotypes and genotypes across urbanization gradient, and iii) much broader taxonomic coverage (including invertebrates) necessary to draw more robust conclusions on how general (or taxa-specific) are immune responses of animals to urbanization.

Smaller Australian raptors have greater urban tolerance

Urbanisation is occurring around the world at a rapid rate and is generally associated with negative impacts on biodiversity at local, regional, and global scales. Examining the behavioural response profiles of wildlife to urbanisation helps differentiate between species that do or do not show adaptive responses to changing landscapes and hence are more or less likely to persist in such environments. Species-specific responses to urbanisation are poorly understood in the Southern Hemisphere compared to the Northern Hemisphere, where most of the published literature is focussed. This is also true for raptors, despite their high diversity and comparably high conservation concern in the Southern Hemisphere, and their critical role within ecosystems as bioindicators of environmental health. Here, we explore this knowledge gap using community science data sourced from eBird to investigate the urban tolerance of 24 Australian raptor species at a continental scale. We integrated eBird data with a global continuous measure of urbanisation, artificial light at night (ALAN), to derive an urban tolerance index, ranking species from positive to negative responses according to their tolerance of urban environments. We then gathered trait data from the published literature to assess whether certain traits (body mass, nest substrate, habitat type, feeding guild, and migratory status) were associated with urban tolerance. Body size was negatively associated with urban tolerance, as smaller raptors had greater urban tolerance than larger raptors. Out of the 24 species analysed, 13 species showed tolerance profiles for urban environments (positive response), and 11 species showed avoidance profiles for urban environments (negative response). The results of this study provide impetus to conserve native habitat and improve urban conditions for larger-bodied raptor species to conserve Australian raptor diversity in an increasingly urbanised world.

Uncovering the Effects of COVID-19 Mask Wearing on Bird Flight Initiation Distance in Urbanized Areas in the Southern Philippines

The COVID-19 pandemic has caused significant changes in public and human activities worldwide, including using masks and reducing human interaction. These changes have also affected wildlife behavior, especially in urban areas. However, there is limited understanding of the impact of COVID-19-related human activities, mainly mask wearing, on the behavior of urban bird species. This case is intriguing in the Philippines, where COVID-19 restrictions and mask wearing have been more prolonged than in other countries. We studied two common urban bird species (Geopelia striata and Passer montanus) in Southcentral Mindanao, Philippines, to assess their response to mask wearing by examining their alert distance (AD) and flight initiation distance (FID). We found that birds had a reduced FID to mask wearing, but only significantly in G. striata (Zebra Doves) and not in P. montanus (Eurasian tree sparrow). The effect of the variables related to urbanization on FID was contrasting. For example, ambient noise increased bird vigilance while proximity to roads reduced bird FID in urbanized areas, but their effects were weaker compared to mask wearing. We conclude that mask wearing during the COVID-19 pandemic is a significant environmental element that alters bird escape responses in urban areas, and the effects may be species-specific.

Counter-gradient variation and the expensive tissue hypothesis explain parallel brain size reductions at high elevation in cricetid and murid rodents

To better understand functional morphological adaptations to high elevation (> 3000 m above sea level) life in both North American and African mountain-associated rodents, we used microCT scanning to acquire 3D images and a 3D morphometric approach to calculate endocranial volumes and skull lengths. This was done on 113 crania of low-elevation and high-elevation populations in species of North American cricetid mice (two Peromyscus species, n = 53), and African murid rodents of two tribes, Otomyini (five species, n = 49) and Praomyini (four species, n = 11). We tested two distinct hypotheses for how endocranial volume might vary in high-elevation populations: the expensive tissue hypothesis, which predicts that brain and endocranial volumes will be reduced to lessen the costs of growing and maintaining a large brain; and the brain-swelling hypothesis, which predicts that endocranial volumes will be increased either as a direct phenotypic effect or as an adaptation to accommodate brain swelling and thus minimize pathological symptoms of altitude sickness. After correcting for general allometric variation in cranial size, we found that in both North American Peromyscus mice and African laminate-toothed (Otomys) rats, highland rodents had smaller endocranial volumes than lower-elevation rodents, consistent with the expensive tissue hypothesis. In the former group, Peromyscus mice, crania were obtained not just from wild-caught mice from high and low elevations but also from those bred in common-garden laboratory conditions from parents caught from either high or low elevations. Our results in these mice showed that brain size responses to elevation might have a strong genetic basis, which counters an opposite but weaker environmental effect on brain volume. These results potentially suggest that selection may act to reduce brain volume across small mammals at high elevations but further experiments are needed to assess the generality of this conclusion and the nature of underlying mechanisms.

Traits shaping urban tolerance in birds differ around the world

As human density increases, biodiversity must increasingly co-exist with urbanization or face local extinction. Tolerance of urban areas has been linked to numerous functional traits, yet few globally consistent patterns have emerged to explain variation in urban tolerance, which stymies attempts at a generalizable predictive framework. Here, we calculate an Urban Association Index (UAI) for 3,768 bird species in 137 cities across all permanently inhabited continents. We then assess how this UAI varies as a function of ten species-specific traits and further test whether the strength of trait relationships vary as a function of three city-specific variables. Of the ten species traits, nine were significantly associated with urban tolerance. Urban-associated species tend to be smaller, less territorial, have greater dispersal ability, broader dietary and habitat niches, larger clutch sizes, greater longevity, and lower elevational limits. Only bill shape showed no global association with urban tolerance. Additionally, the strength of several trait relationships varied across cities as a function of latitude and/or human population density. For example, the associations of body mass and diet breadth were more pronounced at higher latitudes, while the associations of territoriality and longevity were reduced in cities with higher population density. Thus, the importance of trait filters in birds varies predictably across cities, indicating biogeographic variation in selection for urban tolerance that could explain prior challenges in the search for global patterns. A globally informed framework that predicts urban tolerance will be integral to conservation as increasing proportions of the world's biodiversity are impacted by urbanization.

Nor S, Mansor MS. Distribution of Six Urban Bird Species in Urban Agglomeration of Central Region of Peninsular Malaysia Using Ebird Database

Developing countries are undergoing rapid urbanisation to fulfil the high demands of incremental population growth, construction, and development. Excessive development has negative impacts on biodiversity by altering or destroying habitats. However, each bird species may respond differently to habitat alteration. Therefore, this study was conducted to determine the distribution of urban bird species in metropolitan cities and nearby areas in Peninsular Malaysia. The main objective of this study was to determine the distribution patterns of six aesthetically valuable urban bird species (Black-naped Oriole [Oriolus chinensis], Yellow-vented Bulbul [Pycnonotus goiavier], White-throated Kingfisher [Halcyon smyrnensis], Pink-necked Green-Pigeon [Treron vernans], Coppersmith Barbet [Psilopogon haemacephalus] and Common Iora [Aegithina tiphia]) in Greater Kuala Lumpur (the Klang Valley region) using observations from a citizen science (eBird) database. We mapped species abundance throughout the focal area using ArcGIS and analysed the data using Minitab. Three urban bird species dominated, with the highest number of observations recorded: Yellow-vented Bulbul (46.59%), Pink-necked Green-Pigeon (19.25%), and Black-naped Oriole (13.00%). While, the Coppersmith Barbet had the lowest recorded observations (2.76%). Species abundance differed significantly across the study region (F=5.12,p<0.05), with the studied species’ occurrence increasing as green spaces increased. Such dynamic mapping is crucial for better understanding the mechanisms of the persistence of urban biodiversity. We suggest creating more green areas and planting roadside trees to provide green corridors within cities to help sustain urban biodiversity.

House Sparrow (Passer domesticus) escape behavior is triggered faster in smaller settlements

A recurrent behavioral trait model to study adaptation to urban environments is the flight initiation distance (FID), measured as the distance at which animals flee from an approaching threat. It has previously been shown that urban birds display shorter FID than their non-urban (rural) counterparts. However, discerning whether this is the result of habituation to human presence and frequentation, or of ecological factors related to the size of the city (considered as "systemic habituation"), has not yet been addressed. In this study, we analyzed House Sparrow (Passer domesticus) FIDs in a network of 26 small towns and villages within the same region in northeastern Spain. Our aim was to relate FID to human population density and settlement size. If the habituation to human presence hypothesis was supported, we should expect FIDs to decrease with the density of the human population across the human settlements, since this type of habituation is related to the rate of human exposure and this is proportional to human density. However, if the systemic habituation hypothesis was supported, FIDs should instead relate to the size of the human settlements, as the abundance of predators, similarly to other ecological variables, is often proportional to the size of towns. Results showed House Sparrows to be bolder in larger human settlements, but not necessarily the ones with a higher density of human population. This supports the idea that the fact that urban birds display shorter FIDs than their rural counterparts is the result of systemic ecological factors rather than the results of a simple habituation to humans.

Snake life history traits and their association with urban habitat use in a tropical city

Urbanisation changes landscapes, often simplifying and homogenising natural ecosystems while introducing novel environments. Although this transformation often adversely impacts native wildlife, generalist species that exhibit broad dietary and habitat requirements can persist and take advantage of urban environments. To understand which life history traits most influence the occurrence of a diverse snake assemblage in an urban environment, we leveraged a dataset of 5102 detection records for 12 snake species in the tropical city of Darwin, Australia. By building ecological niche models, calculating urban niche hypervolume, and compiling life history data, we analysed the diversity of environments occupied by each species and determined which landscape components were most associated with occurrence data. In keeping with our hypothesis that generalist species would be more successful, we found that species with broader habitat and dietary preferences, as well as a penchant for arboreality, were associated with larger urban niche hypervolumes and more frequent human–snake interactions. Additionally, we found that colubrid snakes had significantly larger urban niche hypervolumes than elapid species. These findings contribute to understanding how life history traits aid wildlife persistence in, and adaptation to, urban ecosystems, and have implications for landscape design and conservation management.

Foraging on anthropogenic food predicts problem-solving skills in a seabird

Species and populations with greater cognitive performance are more successful at adapting to changing habitats. Accordingly, urban species and populations often outperform their rural counterparts on problem-solving tests. Paradoxically, urban foraging also might be detrimental to the development and integrity of animals' brains because anthropogenic foods often lack essential nutrients such as the long-chain omega-3 fatty acids eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA), which are important for cognitive performance in mammals and possibly birds. We tested whether urbanization or consumption of EPA and DHA are associated with problem-solving abilities in ring-billed gulls, a seabird that historically exploited marine environments rich in omega-3 fatty acids but now also thrives in urban centres. Using incubating adults nesting across a range of rural to urban colonies with equal access to the ocean, we tested whether urban gulls preferentially consumed anthropogenic food while rural nesters relied on marine organisms. As we expected individual variation in foraging habits within nesting location, we characterized each captured gulls' diet using stable isotope and fatty acid analyses of their red blood cells. To test their problem-solving abilities, we presented the sampled birds with a horizontal rendition of the string-pull test, a foraging puzzle often used in animal cognitive studies. The isotopic and fatty acid profiles of urban nesters indicated a diet comprising primarily anthropogenic food, whereas the profiles of rural nesters indicated a high reliance on marine organisms. Despite the gulls' degree of access to urban foraging habitat not predicting solving success, birds with biochemical profiles reflecting anthropogenic food (less DHA and a higher carbon-13 ratio in their red blood cells) had a greater probability of solving the string-pull test. These results suggest that experience foraging on anthropogenic food is the main explanatory factor leading to successful problem-solving, while regular consumption of omega-3s during incubation appears inconsequential.

Bird Assemblages in a Peri-Urban Landscape in Eastern India

Urbanization plays an important role in biodiversity loss across the globe due to natural habitat loss in the form of landscape conversion and habitat fragmentation on which species depend. To study the bird diversity in the peri-urban landscape, we surveyed four habitats—residential areas, cropland, water bodies, and sal forest; three seasons—monsoon, winter, and summer in Baripada, Odisha, India. We surveyed from February 2018 to January 2019 using point counts set along line transects; 8 transects were established with a replication of 18 each. During the survey, 6963 individuals of 117 bird species belonged to 48 families and 98 genera in the study area, whereas cropland showed rich avian diversity. Based on the non-parametric multidimensional scale (NMDS) and one-way ANOVA, bird richness and abundance differed significantly among the habitats. Cropland showed higher species richness than other habitats; however, water bodies showed more abundance than others. The similarity of bird assemblage was greater between residential areas and cropland than forest and water bodies based on similarity indices. Among seasons, we observed the highest bird species richness in winter and the highest similarity of species richness in monsoon and summer. In conclusion, our study reported that agricultural and degraded landscapes like cropland play important roles in conserving bird diversity in peri-urban landscapes. Our findings highlighted and identified the problems that affect the local biodiversity (e.g., birds) in the peri-urban landscape. It can assist the local government in urban planning and habitat management without affecting the local biodiversity, including birds.

Anthropogenic habitat modification alters calling phenology of frogs

Anthropogenic habitat modification significantly challenges biodiversity. With its intensification, understanding species' capacity to adapt is critical for conservation planning. However, little is known about whether and how different species are responding, particularly among frogs. We used a continental-scale citizen science dataset of >226,000 audio recordings of 42 Australian frog species to investigate how calling-a proxy for breeding-phenology varied along an anthropogenic modification gradient. Calling started earlier and breeding seasons lengthened with increasing modification intensity. Breeding seasons averaged 22.9 ± 8.25 days (standard error) longer in the most modified compared to the least modified regions, suggesting that frog breeding activity was sensitive to habitat modification. We also examined whether calls varied along a modification gradient by analysing the temporal and spectral properties of advertisement calls from a subset of 441 audio recordings of three broadly distributed frog species. There was no appreciable effect of anthropogenic habitat modification on any of the measured call variables, although there was high variability. With continued habitat modification, species may shift towards earlier and longer breeding seasons, with largely unknown ecological consequences in terms of proximate and ultimate fitness.

Endangered animals and plants are positively or neutrally related to wild boar (Sus scrofa) soil disturbance in urban grasslands

Wild boar is increasingly establishing populations in the outskirts of European cities, with the largest German urban population occurring in Berlin. Related soil disturbance in grasslands is common and often considered as damage to biodiversity. However, it is unknown how animal and plant species in urban grasslands respond to wild boar activity - an important limitation for conservation management. We sampled plants, grasshoppers and sand lizards in 22 dry grasslands and measured wild boar activity. We show that plant diversity decreased with rooting intensity, but not species richness, endangered or specialist species. Relationships with animals were mostly positive. Grasshopper diversity, total richness and richness of endangered and specialist species were positively related to rooting, as was sand lizard abundance. These relationships contrast to mostly negative effects in the wild boar's non-native range. This first multi-taxa study in a large city suggests that soil disturbance by wild boars is not necessarily a threat to biodiversity. An implication for conservation is to consider the context-dependence of biodiversity responses to wild boar activity. For dry grasslands, disturbed patches should be accepted in management plans rather than re-vegetated by seeding.

Compensatory recruitment allows amphibian population persistence in anthropogenic habitats

Habitat anthropization is a major driver of global biodiversity decline. Although most species are negatively affected, some benefit from anthropogenic habitat modifications by showing intriguing life-history responses. For instance, increased recruitment through higher allocation to reproduction or improved performance during early-life stages could compensate for reduced adult survival, corresponding to "compensatory recruitment". To date, evidence of compensatory recruitment in response to habitat modification is restricted to plants, limiting understanding of its importance as a response to global change. We used the yellow-bellied toad (Bombina variegata), an amphibian occupying a broad range of natural and anthropogenic habitats, as a model species to test for and to quantify compensatory recruitment. Using an exceptional capture-recapture dataset composed of 21,714 individuals from 67 populations across Europe, we showed that adult survival was lower, lifespan was shorter, and actuarial senescence was higher in anthropogenic habitats, especially those affected by intense human activities. Increased recruitment in anthropogenic habitats fully offset reductions in adult survival, with the consequence that population growth rate in both habitat types was similar. Our findings indicate that compensatory recruitment allows toad populations to remain viable in human-dominated habitats and might facilitate the persistence of other animal populations in such environments.

Taxonomic and functional components of avian metacommunity structure along an urban gradient

Identifying biological processes that structure natural communities has long interested ecologists. Community structure may be determined by various processes, including differential responses of species to environmental characteristics, regional-level spatial influences such as dispersal, or stochasticity generated from ecological drift. Few studies have used the metacommunity paradigm (interacting communities linked by dispersal) to investigate avian community composition along an urban gradient, yet such a theoretical construct may provide insights into species turnover even in unnatural settings such as rural to urban gradients. We measured the influence of spatial and environmental characteristics on two aspects of avian community structure across a gradient of urbanization: 1) taxonomic composition and 2) functional richness based on diet, foraging strategies, nesting locations and morphology. We also measured the relationship between species traits and environmental variables with an RLQ-fourth corner analysis. Together, environmental and spatial processes were significantly related to taxonomic structure and functional richness, but spatial variables accounted for more variation than environmental variables. Fine spatial scales were positively correlated with insectivorous birds and negatively correlated with body and wing size. Urbanization was positively correlated with birds that forage at the canopy level, while emergent wetlands were negatively correlated with birds that nested in cliffs and frugivorous birds. Functional richness and urbanization were significantly related to fine spatial variables. Spatial and environmental factors played an important role in taxonomic and functional structure in avian metacommunity structure. This study highlights the importance of studying multiple aspects of biodiversity, such as taxonomic and functional dimensions, especially when examining effects of complementary spatial and environmental processes.

Transcriptome analysis revealed the roles of long non-coding RNA and mRNA in the bursa of Fabricius during pigeon (Columba livia) development

The bursa of Fabricius (BF) is the critical humoral immune organ to birds, playing an essential role in B lymphocyte differentiation. However, unlike other poultries, surgical removal of pigeon BF did not limit humoral immune responsiveness. To investigate the expression profiles and the potential role of mRNA and long non-coding RNA (LncRNA) in squab BFs, transcriptome analysis was performed by RNA-Sequencing (RNA-Seq) over three developmental stages (1-day, 13 and 26 days old). We identified 13,072 mRNAs and 19,129 lncRNAs, of which 2,752 mRNAs and 1,515 lncRNAs were differential expressed (DE) in pigeon BFs over three developmental stages. Cluster analysis presented different expression patterns in DE mRNAs and lncRNAs. Functional enrichment analysis revealed that DE lncRNAs and mRNAs with distinct expression patterns might play crucial roles in the immune system process and tissue morphogenesis. In particular, some DE genes and lncRNAs with higher expression levels in 13D or 26D are related to lymphocyte activation and differentiation, adaptive immune response, positive regulation of immune response, leukocyte migration, etc. Protein-protein interaction (PPI) network and Molecular Complex Detection (MCODE) analysis sreened six significant modules containing 37 genes from immune-related DE gene cluster, which is closely linked in B cell activation, lymphocyte differentiation, B cell receptor signaling pathway, etc. Our study characterizes mRNA and lncRNA transcriptomic variability in pigeon BFs over different developmental stages and enhances understanding of the mechanisms underlying physiological functions of pigeon BF.

Population density mediates induced immune response, but not physiological condition in a well-adapted urban bird

Thriving under high population density is considered a major feature of urban exploiter species. Nevertheless, population density appears to be a surprisingly overlooked factor in urban ecology studies. High population numbers observed in urban species might promote pathogen transmission and negatively affect health or condition, thus requiring investments in immunocompetence. The feral pigeon Columba livia domestica is an example of a successful city-dweller, found in great abundance in large cities across the globe. We investigated the effects of population density on induced immune response (phytohaemagglutinin skin test) and body condition (blood haemoglobin concentration and size-corrected body mass) in 120 feral pigeons, captured along population density gradient in Łódź (central Poland). We found that stronger immune response was associated with higher population density, but was not related to physiological condition and physiological stress (heterophil/lymphocyte ratio). Moreover, condition indices were not associated with population density. However, since pigeon population density was highly correlated with the level of habitat urbanization, we cannot exclude that any density-dependent effects may be mediated by habitat variation. Our results indicate that urban environment, via population density, might exert different selective pressures on immunocompetence and body condition in this successful urban exploiter.

Nesting Site and Plumage Color Are the Main Traits Associated with Bird Species Presence in Urban Areas

Simple Summary

Urban areas are expected to grow in the next decades, filtering bird species from the regional pool based on their life history traits. The objective of this study is to determine different bird species responses to urbanization using ordination analysis, and to characterize their life history traits combining information about diet, habitat and plumage color. Species identified as ‘urban exploiters’ tended to nest in buildings and with uniform plumage, whereas those identified as ‘urban avoiders’ tended to be ground nesting species with variable plumage. A third type, ‘urban adapters’, tended to be tree-nesting species with a low diet breadth, intermediate plumage lightness, low presence of plumage sexual dimorphism and high presence of iridescence. The results suggest that nest predation and habitat loss may exclude ground nesting birds from urban areas. The high density of pedestrians in urban centers may favor uniform plumages in birds that enhance camouflage.

Abstract

Urban areas are expected to grow in the next decades, filtering bird species from the regional pool based on their life history traits. Although the impact of urbanization on traits such as diet, habitat and migratory behavior has been analyzed, their joint role with other traits related to plumage color has not yet been analyzed. Urban characteristics such as impervious surfaces, human presence and pollutants may be related to dark and uniform plumages. The objective of this study is to determine different bird species responses to urbanization using ordination analysis, and to characterize their life history traits combining information about diet, habitat and plumage color. Birds were surveyed along urban–rural gradients located in three cities of central Argentina. Species associations with urban characteristics were assessed through principal component analysis. Two axes were obtained: the first related positively to urban exploiters and negatively to urban avoiders, and a second axis related negatively to urban adapters. The scores of each axis were related to species traits through phylogenetic generalized least squares models. Species identified as ‘urban exploiters’ tended to nest in buildings and have uniform plumage, whereas those identified as ‘urban avoiders’ tended to be ground-nesting species with variable plumage. A third type, ‘urban adapters’, tended to be tree-nesting species with a low diet breadth, intermediate plumage lightness, low presence of plumage sexual dimorphism and high presence of iridescence. The results suggest that nest predation and habitat loss may exclude ground nesting birds from urban areas. The high density of pedestrians and domestic animals, such as cats and dogs, in urban centers may favor uniform plumages in birds that enhance camouflage.

Nest architecture is linked with ecological success in songbirds

Nests are essential constructions that determine fitness, yet their structure can vary substantially across bird species. While there is evidence supporting a link between nest architecture and the habitat a species occupies, we still ignore what ecological and evolutionary processes are linked to different nest types. Using information on 3175 species of songbirds, we show that-after controlling for latitude and body size-species that build domed nests (i.e. nests with a roof) have smaller ranges, are less likely to colonise urban environments and have potentially higher extinction rates compared to species with open and cavity nests. Domed nests could be a costly specialisation, and we show that these nests take more time to be built, which could restrict breeding opportunities. These diverse strands of evidence suggest that the transition from domed to open nests in passerines could represent an important evolutionary innovation behind the success of the largest bird radiation.

The Behavioral Responses of the Chiguanco Thrush to Urbanization in a Neotropical City Comes From Preadapted Behavioral Traits

Several animal species can survive within cities by changing their behavior; such changes could be the result of evolutionary adaptation, epigenetic effects, or come from preadapted traits through phenotypic plasticity or non-random dispersal. Exploring whether behavioral preadapted traits are present in non-urbanized populations could improve our understanding of the processes that allow animals to cope with urbanization. We compared the boldness, neophobia, and solving-test skills of adult individuals of the Chiguanco Thrush (Turdus chiguanco) between urban and extra-urban habitats in La Paz (Bolivia), a high-altitude Neotropical city. The urban Chiguanco Thrushes were bolder, less neophobic, and performed better in problem-solving tests. Extra-urban individuals varied significantly more among them in boldness and neophobia, and although a smaller proportion of individuals were able to solve the simplest problem-solving test, they did so in the same way as the urban ones. This evidence suggests that the behavioral responses of the Chiguanco Thrush to urbanization in La Paz come from preadapted traits.

Variation in Hematological Indices, Oxidative Stress, and Immune Function Among Male Song Sparrows From Rural and Low-Density Urban Habitats

A central theme in the field of ecology is understanding how environmental variables influence a species’ distribution. In the last 20 years, there has been particular attention given to understanding adaptive physiological traits that allow some species to persist in urban environments. However, there is no clear consensus on how urbanization influences physiology, and it is unclear whether physiological differences in urban birds are directly linked to adverse outcomes or are representative of urban birds adaptively responding to novel environmental variables. Moreover, though low-density suburban development is the fastest advancing form of urbanization, most studies have focused on animals inhabiting high intensity urban habitats. In this study, we measured a suite of physiological variables that reflect condition and immune function in male song sparrows (Melospiza melodia) from rural and suburban habitats. Specifically, we measured hematological indices [packed cell volume (PCV), hemoglobin concentration, mean corpuscular hemoglobin concentration (MCHC)], circulating glutathione (total, reduced, and oxidized), oxidative damage (d-ROM concentration), antioxidant capacity, and components of the innate immune system [bacteria killing ability (BKA), white blood cell counts]. We also measured whole-animal indices of health, including body condition (scaled mass index length) and furcular fat. Song sparrows inhabiting suburban environments exhibited lower hemoglobin and MCHC, but higher body condition and furcular fat scores. Additionally, suburban birds had higher heterophil counts and lower lymphocyte counts, but there were no differences in heterophil:lymphocyte ratio or BKA between suburban and rural birds. PCV, glutathione concentrations, and oxidative damage did not differ between suburban and rural sparrows. Overall, suburban birds did not exhibit physiological responses suggestive of adverse outcomes. Rather, there is some evidence that sparrows from rural and suburban habitats exhibit phenotypic differences in energy storage and metabolic demand, which may be related to behavioral differences previously observed in sparrows from these populations. Furthermore, this study highlights the need for measuring multiple markers of physiology across different types of urban development to accurately assess the effects of urbanization on wildlife.

Does the Urban Environment Act as a Filter on the Individual Quality of Birds?

Phenotypic divergences of birds are common between urban and natural habitats and can result from different selective pressures between habitats or maladaptation to the city. No uniform patterns were observed, especially concerning markers of bird health, such as, for example, telomere length. Telomeres are involved in maintaining genome integrity and naturally shorten with age, but environmental stressors can accelerate their attrition. Thus, telomere length can be an indicator of individual quality. Some studies showed that urban breeders had longer telomeres than forest individuals. Two hypotheses can explain this result: (1) urban breeders are younger than forests breeders, and (2) cities act as a filter on individuals and only high-quality birds can successfully reproduce. In this context, we compared the age category (molting pattern) and morphological and physiological characteristics of urban and forest Great Tits before and during breeding. No differences in age or body condition were observed. However, urban breeders were smaller and had shorter telomeres than birds captured in winter. Urban birds had longer telomeres than forest birds, only in winter. These results highlight that urban habitats potentially favor smaller birds. However, the decrease in telomere length between winter and reproduction only in the city suggest a higher cost of reproduction in the city compared to the forest.

Wintering Town: Individual Quality of Migratory Warblers Using Green Urban Areas in a Neotropical City

Migratory birds can be familiar winter visitors of Neotropical cities. However, of the regional migrant species bird pool, only a few species are abundant in urban areas. Their presence inside cities has been positively related to green urban areas with high tree cover. However, urban elements like artificial lights can also attract them to cities. Habitat quality that enables energetic refueling for migrant birds is crucial in all their annual migratory stages. While some Nearctic cities offer a high-quality refueling habitat for migrant birds, we lack this information for Neotropical cities where migratory birds winter. In this study, we evaluate whether the urban green areas of a Neotropical city act as high-quality habitats for two abundant species of migratory warblers: Setophaga coronata and Leiothlypis ruficapilla. We assessed this by capturing birds inside three urban green areas and comparing their abundances, population structure, and individual quality (scaled-mass index—SMI) with individuals spending winter in natural vegetation habitats outside the city. We found that both species do not show differences in SMI between urban and non-urban sites. We also found that Setophaga coronata had a higher capture rate in urban than non-urban sites, while Leiothlypis ruficapilla had similar capture rates in both habitats. Our findings indicate that the urban green areas of cities can act as suitable quality habitat during winter for two abundant migrant birds. Our results indicate that cities can have a higher conservation potential for a declining and sensitive group such as the Nearctic-Neotropical migratory birds than previously thought. We also point out the need to acknowledge that migratory species can be urban dwellers.

Context-dependent variation in innovation as a function of urbanization in a songbird

Recent human-induced transformations to the environment are significantly impacting wild animal populations. Whereas some animals thrive due to these changes, others are being extinguished. Many studies have attempted to identify behavioural traits (e.g. personality, diet versatility, cognition) that allow some animals to succeed in human-dominated landscapes, but few have studied multiple traits or environmental contexts concurrently, despite the fact that different environments may require different types of behavioural performance. We presented house finches (Haemorhous mexicanus) captured from urban, suburban, and rural sites with two different environmental problems to solve (escaping from a confinement and finding food in multiple feeding structures) and measured the success and speed of solving the challenge as well as activity levels and stress behaviours of the birds. We found that urban birds were better at solving the escape challenge, but there was no difference in finding a hidden food source. In addition, we found that birds who solved the escape challenge were more active than those who did not solve this problem, although we observed no such behavioural difference in the food challenge. These results indicate that, because problem-solving challenges can vary across environments, certain types of innovation may be prioritized over others in urban-dwelling species.

Genetic adaptation to urban living: molecular DNA analyses of wild boar populations in Budapest and surrounding area

Studies of wild boar, Sus scrofa Linnaeus 1758, in urban and suburban areas of Budapest, Hungary, have indicated that these populations do not have continuous contact. Based on the assumption that the city has a discrete population, we hypothesized that the urban wild boar would differ genetically from those in suburban areas. Analysis of single-nucleotide polymorphism (SNP) data using the GeneSeek Genomic Profiler (GGP) Porcine 50 K system (Neogen, Scotland, UK) differentiated three populations: Buda (B) from the Western bank of the Danube; Buda Surrounding (BS); and Valkó (V) from the Eastern bank of the Danube. The coefficient of genetic differentiation (FST) for the B and BS populations was low. The inbreeding coefficients of the populations BS and V were close to zero, while population B had a high positive value reflecting the influence of founders and the inbreeding of the continuous urban population. The genome regions that were most differentiated between the B and BS populations were analyzed based on the FST values of the SNP markers using a mixed linear multi-locus model and BayeScan software. The most differentiated marker, WU_10.2_18_56278226, was found on chromosome 18. The surrounding region contained several candidate genes that could play important roles in adaptations related to human-induced stress. Two of these, encoding the adenylate cyclase 1 (ADCY1) and inhibin beta A chain precursor (INHBA) genes, were sequenced. While IHBA gene did not display variation, the allele distribution of the ADCY1 gene in the B population was significantly different from that of the BS population supporting the parapatric differentiation of wild boar.

Cross-Context Responses to Novelty in Rural and Urban Small Mammals

The Anthropocene is the era of urbanization. The accelerating expansion of cities occurs at the expense of natural reservoirs of biodiversity and presents animals with challenges for which their evolutionary past might not have prepared them. Cognitive and behavioral adjustments to novelty could promote animals’ persistence under these altered conditions. We investigated the structure of, and covariance between, different aspects of responses to novelty in rural and urban small mammals of two non-commensal rodent species. We ran replicated experiments testing responses to three novelty types (object, food, or space) of 47 individual common voles (Microtus arvalis) and 41 individual striped field mice (Apodemus agrarius). We found partial support for the hypothesis that responses to novelty are structured, clustering (i) speed of responses, (ii) intensity of responses, and (iii) responses to food into separate dimensions. Rural and urban small mammals did not differ in most responses to novelty, suggesting that urban habitats do not reduce neophobia in these species. Further studies investigating whether comparable response patters are found throughout different stages of colonization, and along synurbanization processes of different duration, will help illuminate the dynamics of animals’ cognitive adjustments to urban life.

Urbanisation weakens selection on the timing of breeding and clutch size in blue tits but not in great tits

Abstract

Urbanisation is a globally occurring phenomenon and is predicted to continue increasing rapidly. Urban ecosystems present novel environments and challenges which species must acclimate or adapt to. These novel challenges alter existing or create new selection pressures on behaviours which provide an opportunity to investigate eco-evolutionary responses to contemporary environmental change. We used 7 years of breeding data from urban and forest populations of blue and great tits to understand whether selection for timing of breeding or clutch size differed between the two habitats and species. We found that urban great tits laid eggs earlier than their forest counterparts, but there was no evidence of a difference in selection for earlier breeding. Blue tits, however, did not differ in timing of egg laying between the two habitats, but selection for earlier laying was weaker in the urban environment. Both species laid smaller clutches in the urban site and had positive selection for larger clutch sizes which did not differ in strength for the great tits but did for blue tits, with weaker selection in the urban population. Our results suggest that food availability for nestlings may be constraining urban birds, and that the temporal cues females use to time breeding correctly, such as tree budburst and food availability, may be absent or reduced in urban areas due to lower caterpillar availability. These results have implications for our understanding of the adaptation of wild animals to city life.

Significance statement

Urbanisation is expanding rapidly and changing the environment many species live in. A key challenge is to understand how species adapt to the urban environment, why some species can adapt, why others cannot and what we can do to ensure that cities are ecologically sustainable and biodiversity rich. Here we show that the strength of natural selection for early breeding and larger clutch size is weaker in urban than non-urban blue tits, likely due to reduced and irregular availability of natural insect food in urban areas. This effect was not found in great tits. Thus, urbanisation can alter the selection pressures wild animals are exposed to, but this effect may differ between species, even when closely related. This has implications for our understanding of how species adapt to urban life.

High-resolution prediction of American red squirrel in Interior Alaska: a role model for conservation using open access data, machine learning, GIS and LIDAR

American red squirrels (Tamiasciurus hudsonicus) are small mammals that are abundantly distributed throughout North America. Urbanization in the Anthropocene is now a global process, and squirrels live in affected landscapes. This leads to squirrels adjusting to human developments. Not much is known about the distribution of squirrels and squirrel middens near humans, especially not in the subarctic and sub-urbanized regions. Although this species is hunted, there are no real publicly available distribution and abundance estimates nor management plans and bag limits for squirrels in Alaska or in the United States known by us, except the endangered Mt. Graham squirrel. In general, insufficient squirrel conservation research is carried out; they are underrepresented in research and its literature. To further the science-based management for such species, this study aims to generate the first digital open access workflow as a generic research template for small mammal work including the latest machine learning of open source and high-resolution LIDAR data in an Open Source Geographic Information System (QGIS) and ArcGIS. Machine learning has proven to be less modeler biased and improve accuracy of the analysis outcome, therefore it is the preferred approach. This template is designed to be rapid, simple, robust, generic and effective for being used by a global audience. As a unique showcase, here a squirrel midden survey was carried out for two years (2016 and 2017). These squirrel middens were detected in a research area of 45,5 hectares (0,455 km²) in downtown Fairbanks, interior boreal forest of Alaska, U.S. Transect distances were geo-referenced with a GPS and adjusted to the visual conditions to count all squirrel middens within the survey area. Different layers of proximity to humans and habitat characteristics were assembled using aerial imagery and LIDAR data (3D data needed for an arboreal species like the red squirrels) consisting of a 3 × 3 m resolution. The layer data was used to train a predictive distribution model for red squirrel middens with machine learning. The model showed the relative index of occurrence (RIO) in a map and identified canopy height, distance to trails, canopy density and the distance to a lake, together, as the strongest predictors for squirrel midden distribution whereas open landscape and disturbed areas are avoided. It is concluded that squirrels select for high and dense forests for middens while avoiding human disturbance. This study is able to present a machine learning template to easily and rapidly produce an accurate abundance prediction which can be used for management implications.

What do we know (and need to know) about the role of urban habitats as ecological traps? Systematic review and meta-analysis

Urban areas represent a spectrum that goes from being safe habitats for biodiversity (i.e., habitats more or equally preferred, without costs to fitness) to being ecological traps (i.e., habitats more or equally preferred, but with costs to fitness). Given the imminent urban expansion, it is valuable to assess how biodiversity is responding to urbanization and thus generate timely conservation strategies. We systematically review the urban ecology literature to analyze how much do we know about the role of urban areas as ecological traps. Using a formal meta-analytical approach, we test whether urban areas are functioning as ecological traps or as safe habitats for different taxonomic groups. We generated a data set of 646 effect sizes of different measures of habitat preferences and fitness from 38 papers published between 1985 and 2020. The data set covered 15 countries and 47 urban areas from four continents, including 29 animal species. Studies from North America and Europe were best represented, and birds were the most studied taxa. Overall, the meta-analysis suggests that urbanized habitats are functioning more as safe sites than as ecological traps, mainly for certain species with characteristics that have allowed them to adapt well to urban areas. That is, many of the studied species prefer more urbanized habitats over other less urbanized sites, and their fitness is not modified, or it is even increased. However, there was high heterogeneity among studies. We also performed meta-regressions to identify variables accounting for this heterogeneity across studies and we demonstrate that outcomes may depend on methodological aspects of studies, such as study design or the approach used to measure habitat preference and fitness. More research is needed for poorly studied regions and on a wider range of species before generalizations can be made on the role of urban areas for biodiversity conservation.

Urban Pit-Building Insects Are Attracted to Walls for Multiple Reasons

Simple Summary

Wormlions are small fly larvae that dig pit-traps in loose soil to hunt ants and other prey. Their natural habitat is caves, but they are also abundant in Mediterranean cities below man-made shelters, even in thin layers of soil. They are especially common next to building walls. First, we show that wormlions are indeed closer to walls than expected by chance. Next, we tested several explanations for this observation: the possible effect of soil depth, soil particle size, shade, and prey abundance. We could not find a single explanation for the wormlion’s proximity to walls, and in each site, a different set of explanations held true. The final step was to conduct an experiment. We placed wormlions on clear sand either in the center or next to the wall and observed whether they moved after a day. Those placed in the center moved over longer distances, and we interpret this result to indicate that those adjacent to the wall are more satisfied with their location. Our study provides an example for how animals take advantage of human-made changes in the habitat and prosper in urban habitats.

Abstract

Whereas most animals find urban habitats to be inferior to natural habitats, some “urban specialist” species thrive there. Wormlions present such an example. Common in Mediterranean cities, they cluster in thin layers of loose soil below man-made shelters. Wormlions are fly larvae that dig pit-traps in loose soil and hunt small arthropods. Our first aim was to determine whether wormlion pits accumulate next to walls. Wormlion pits were indeed closer to walls than expected by chance at most of the study sites. We examined possible factors behind this apparent preference, combining field observations and experiments, laboratory work, and theoretical analysis. We examined the effect of soil depth, particle size, shade, and prey abundance. Each factor provided a partial explanation for the wormlions’ proximity to walls, but none provided an overall explanation. We developed a spatially explicit simulation model, demonstrating under which conditions wall-adjacent positions are favored. Finally, we created artificial microhabitats, and placed wormlions either in the center or next to the wall. The wormlions in the center moved over longer distances than those next to the wall and did so more in the wall’s direction. The abundance of walls may help to explain the success of wormlions in urban habitats.

Species' traits drive amphibian tolerance to anthropogenic habitat modification

Anthropogenic habitat modification is accelerating, threatening the world's biodiversity. Understanding species' responses to anthropogenic modification is vital for halting species' declines. However, this information is lacking for globally threatened amphibians, informed primarily by small community-level studies. We integrated >126,000 verified citizen science observations of frogs, with a global continuous measure of anthropogenic habitat modification for a continental scale analysis of the effects of habitat modification on frogs. We derived a modification tolerance index-accounting for anthropogenic stressors such as human habitation, agriculture, transport and energy production-for 87 species (36% of all Australian frog species). We used this index to quantify and rank each species' tolerance of anthropogenic habitat modification, then compiled traits of all the frog species and assessed how well these equipped species to tolerate modified habitats. Most of Australia's frog species examined were adversely affected by habitat modification. Habitat specialists and species with large geographic range sizes were the least tolerant of habitat modification. Call dominant frequency, body size, clutch type and calling position (i.e. from vegetation) were also related to tolerance of habitat modification. There is an urgent need for improved consideration of anthropogenic impacts and improved conservation measures to ensure the long-term persistence of frog populations, particularly focused on specialists and species identified as intolerant of modified habitats.

Avian corticosteroid-binding globulin: biological function and regulatory mechanisms in physiological stress responses

Corticosteroid-binding globulin (CBG) is a high-affinity plasma protein that binds glucocorticoids (GCs) and regulates their biological activities. The structural and functional properties of CBG are crucial to understanding the biological actions of GCs in mediating stress responses and the underlying mechanisms. In response to stress, avian CBGs modulate the free and bound fractions of plasma corticosterone (CORT, the main GC), enabling them to mediate the physiological and behavioral responses that are fundamental for balancing the trade-off of energetic investment in reproduction, immunity, growth, metabolism and survival, including adaptations to extreme high-elevation or high-latitude environments. Unlike other vertebrates, avian CBGs substitute for sex hormone-binding globulin (SHBG) in transporting androgens and regulating their bioavailability, since birds lack an Shbg gene. The three-dimensional structures of avian and mammalian CBGs are highly conserved, but the steroid-binding site topographies and their modes of binding steroids differ. Given that CBG serves as the primary transporter of both GCs and reproductive hormones in birds, we aim to review the biological properties of avian CBGs in the context of steroid hormone transportation, stress responses and adaptation to harsh environments, and to provide insight into evolutionary adaptations in CBG functions occurred to accommodate physiological and endocrine changes in birds compared with mammals.

Characteristics of urban environments and novel problem-solving performance in Eurasian red squirrels

Urban environments can be deemed 'harsh' for some wildlife species, but individuals frequently show behavioural flexibility to cope with challenges and demands posed by life in the city. For example, urban animals often show better performance in solving novel problems than rural conspecifics, which helps when using novel resources under human-modified environments. However, which characteristics of urban environments fine-tune novel problem-solving performance, and their relative importance, remain unclear. Here, we examined how four urban environmental characteristics (direct human disturbance, indirect human disturbance, size of green coverage and squirrel population size) may potentially influence novel problem-solving performance of a successful 'urban dweller', the Eurasian red squirrel, by presenting them with a novel food-extraction problem. We found that increased direct human disturbance, indirect human disturbance and a higher squirrel population size decreased the proportion of solving success at the population level. At the individual level, an increase in squirrel population size decreased the latency to successfully solve the novel problem the first time. More importantly, increased direct human disturbance, squirrel population size and experience with the novel problem decreased problem-solving time over time. These findings highlight that some urban environmental characteristics shape two phenotypic extremes in the behaviour-flexibility spectrum: individuals either demonstrated enhanced learning or they failed to solve the novel problem.

Cool birds: facultative use by an introduced species of mechanical air conditioning systems during extremely hot outdoor conditions

Rapid climate change across the globe is having dramatic effects on wildlife. Responses of organisms to shifting thermal conditions often include physiological and behavioural accommodations, but to date these have been largely viewed and studied as naturally evolved phenomena (e.g. heat avoidance, sweating, panting) and not necessarily as strategies where animals exploit other anthropogenic conditions or resources. Moreover, the degree to which native versus introduced species show thermal plasticity has generated much conservation and ecological interest. We previously have observed introduced rosy-faced lovebirds (Agapornis roseicollis) perching in the relief-air vents on building faces in the Phoenix, Arizona, USA, metropolitan area, but doing so only during summer. Here, we show that such vent-perching events are significantly associated with extreme outdoor summer temperatures (when daily local highs routinely exceed 40°C). In fact, the temperature threshold at which we detected lovebirds starting to perch in cool air vents mirrors the upper range of the thermoneutral zone for this species. These results implicate novel, facultative use of an anthropogenic resource-industrial air-conditioning systems-by a recently introduced species (within the last 35 years) to cool down and survive extremely hot conditions in this urban 'heat-island' environment.

The effect of urbanization on innovation in spotted hyenas

Urbanization represents a dramatic form of evolutionary novelty in the landscapes inhabited by many extant animals. The Cognitive Buffer Hypothesis suggests that innovation, the process by which animals solve novel problems or use novel behaviors, may be key for many animals when adapting to novel environments. If innovation is especially beneficial in urban environments, then we would expect urban animals to be more innovative than their non-urban counterparts. However, studies comparing innovative problem-solving between urban and rural habitats have produced mixed results. Here, we hypothesized that these findings result from comparing only two levels of urbanization when related research suggests that the stage of invasion of urban habitats likely has a strong effect on demand for innovation, with demand being highest during early establishment in a novel environment. To test this hypothesis, we assessed innovation in three locations where spotted hyenas experienced varying degrees of urbanization. Spotted hyenas are relatively innovative compared to other carnivores and, although many large carnivores in Africa are endangered, spotted hyenas remain abundant both inside and outside protected areas. We measured innovation with a multi-access puzzle box with four different doors through which hyenas could obtain a food reward. We predicted that hyenas in a transitional, rapidly urbanizing habitat would be more innovative, measured by the number of unique doors opened, than those in rural or fully urban habitats. Contrary to our predictions, hyenas in the rural habitat were the most innovative. These results challenge the idea that the evolutionary novelty associated with urbanization favors greater innovativeness.