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Mishio M, Sudo E, Ozaki H, Oguchi R, Fujimoto R, Fujii N, Hikosaka K. Heterotic growth of hybrids of Arabidopsis thaliana is enhanced by elevated atmospheric CO 2. AMERICAN JOURNAL OF BOTANY 2024; 111:e16317. [PMID: 38634444 DOI: 10.1002/ajb2.16317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Revised: 02/14/2024] [Accepted: 02/14/2024] [Indexed: 04/19/2024]
Abstract
PREMISE With the global atmospheric CO2 concentration on the rise, developing crops that can thrive in elevated CO2 has become paramount. We investigated the potential of hybridization as a strategy for creating crops with improved growth in predicted elevated atmospheric CO2. METHODS We grew parent accessions and their F1 hybrids of Arabidopsis thaliana in ambient and elevated atmospheric CO2 and analyzed numerous growth traits to assess their productivity and underlying mechanisms. RESULTS The heterotic increase in total dry mass, relative growth rate and leaf net assimilation rate was significantly greater in elevated CO2 than in ambient CO2. The CO2 response of net assimilation rate was positively correlated with the CO2 response of leaf nitrogen productivity and with that of leaf traits such as leaf size and thickness, suggesting that hybridization-induced changes in leaf traits greatly affected the improved performance in elevated CO2. CONCLUSIONS Vegetative growth of hybrids seems to be enhanced in elevated CO2 due to improved photosynthetic nitrogen-use efficiency compared with parents. The results suggest that hybrid crops should be well-suited for future conditions, but hybrid weeds may also be more competitive.
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Affiliation(s)
- Masako Mishio
- Graduate School of Life Sciences, Tohoku University, Aramaki, Aoba, Sendai, 980-8578, Miyagi, Japan
| | - Emi Sudo
- Graduate School of Life Sciences, Tohoku University, Aramaki, Aoba, Sendai, 980-8578, Miyagi, Japan
| | - Hiroshi Ozaki
- Graduate School of Life Sciences, Tohoku University, Aramaki, Aoba, Sendai, 980-8578, Miyagi, Japan
- Translational Research Support Section, National Cancer Center Hospital East, Kashiwa, 277-8577, Chiba, Japan
| | - Riichi Oguchi
- Graduate School of Life Sciences, Tohoku University, Aramaki, Aoba, Sendai, 980-8578, Miyagi, Japan
- Graduate School of Science, Osaka Metropolitan University, 2000, Kisaichi, Katano, 576-0004, Osaka, Japan
| | - Ryo Fujimoto
- Graduate School of Agricultural Science, Kobe University, Nada, Kobe, Hyogo, 657-8501, Japan
| | - Nobuharu Fujii
- Graduate School of Life Sciences, Tohoku University, Katahira, Aoba, Sendai, 980-8577, Miyagi, Japan
| | - Kouki Hikosaka
- Graduate School of Life Sciences, Tohoku University, Aramaki, Aoba, Sendai, 980-8578, Miyagi, Japan
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Oguchi R, Hanada K, Shimizu M, Mishio M, Ozaki H, Hikosaka K. Enhanced growth rate under elevated CO 2 conditions was observed for transgenic lines of genes identified by intraspecific variation analyses in Arabidopsis thaliana. PLANT MOLECULAR BIOLOGY 2022; 110:333-345. [PMID: 35397102 DOI: 10.1007/s11103-022-01265-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Accepted: 03/15/2022] [Indexed: 06/14/2023]
Abstract
Using the whole genome and growth data of Arabidopsis thaliana ecotypes, we identified two genes associated with enhancement of the growth rate in response to elevated CO2 conditions. Improving plant growth under elevated CO2 conditions may contribute to enhanced agricultural yield under future global climate change. In this study, we examined the genes implicated in the enhancement of growth rates under elevated CO2 conditions by analyzing the growth rates of Arabidopsis thaliana ecotypes originating from various latitudes and altitudes throughout the world. We also performed a genome-wide association study and a transcriptome study to identify single nucleic polymorphisms that were correlated with the relative growth rate (RGR) under elevated CO2 conditions or with CO2 response of RGR. We then selected 43 candidate genes and generated their overexpression and/or RNA interference (RNAi) transgenic mutants for screening. After screening, we have found that RNAi lines of AT3G4000 and AT5G50900 showed significantly higher growth rates under the elevated CO2 condition. As per our findings, we conclude that natural variation includes genetic variation associated with the enhancement of plant productivity under elevated CO2 conditions.
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Affiliation(s)
- Riichi Oguchi
- Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8578, Japan
| | - Kousuke Hanada
- Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Fukuoka, 820-8502, Japan
- RIKEN Center for Sustainable Resource Science (CSRS), Yokohama, Kanagawa, 230-0045, Japan
| | - Minami Shimizu
- RIKEN Center for Sustainable Resource Science (CSRS), Yokohama, Kanagawa, 230-0045, Japan
| | - Masako Mishio
- Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8578, Japan
| | - Hiroshi Ozaki
- Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8578, Japan
| | - Kouki Hikosaka
- Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8578, Japan.
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Inoue T, Yamada Y, Noguchi K. Growth temperature affects O 2 consumption rates and plasticity of respiratory flux to support shoot growth at various growth temperatures. PLANT, CELL & ENVIRONMENT 2022; 45:133-146. [PMID: 34719799 DOI: 10.1111/pce.14217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 10/20/2021] [Accepted: 10/22/2021] [Indexed: 06/13/2023]
Abstract
The temperature dependence of respiration rates and their acclimation to growth temperature vary among species/ecotypes, but the details remain unclear. Here, we compared the temperature dependence of shoot O2 consumption rates among Arabidopsis thaliana ecotypes to clarify how the temperature dependence and their acclimation to temperature differ among ecotypes, and how these differences relate to shoot growth. We examined growth analysis, temperature dependence of O2 consumption rates, and protein amounts of the respiratory chain components in shoots of twelve ecotypes of A. thaliana grown at three different temperatures. The temperature dependence of the O2 consumption rates were fitted to the modified Arrhenius model. The dynamic response of activation energy to measurement temperature was different among growth temperatures, suggesting that the plasticity of respiratory flux to temperatures differs among growth temperatures. The similar values of activation energy at growth temperature among ecotypes suggest that a similar process may determine the O2 consumption rates at the growth temperature in any ecotype. These results suggest that the growth temperature affects not only the absolute rate of O2 consumption but also the plasticity of respiratory flux in response to temperature, supporting the acclimation of shoot growth to various temperatures.
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Affiliation(s)
- Tomomi Inoue
- National Institute for Environmental Studies, Ibaraki, Japan
| | - Yusuke Yamada
- School of Life Science, Tokyo University of Pharmacy and Life Sciences, Tokyo, Japan
| | - Ko Noguchi
- School of Life Science, Tokyo University of Pharmacy and Life Sciences, Tokyo, Japan
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Mitochondrial AOX Supports Redox Balance of Photosynthetic Electron Transport, Primary Metabolite Balance, and Growth in Arabidopsis thaliana under High Light. Int J Mol Sci 2019; 20:ijms20123067. [PMID: 31234590 PMCID: PMC6628045 DOI: 10.3390/ijms20123067] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 06/03/2019] [Accepted: 06/20/2019] [Indexed: 12/31/2022] Open
Abstract
When leaves receive excess light energy, excess reductants accumulate in chloroplasts. It is suggested that some of the reductants are oxidized by the mitochondrial respiratory chain. Alternative oxidase (AOX), a non-energy conserving terminal oxidase, was upregulated in the photosynthetic mutant of Arabidopsis thaliana, pgr5, which accumulated reductants in chloroplast stroma. AOX is suggested to have an important role in dissipating reductants under high light (HL) conditions, but its physiological importance and underlying mechanisms are not yet known. Here, we compared wild-type (WT), pgr5, and a double mutant of AOX1a-knockout plant (aox1a) and pgr5 (aox1a/pgr5) grown under high- and low-light conditions, and conducted physiological analyses. The net assimilation rate (NAR) was lower in aox1a/pgr5 than that in the other genotypes at the early growth stage, while the leaf area ratio was higher in aox1a/pgr5. We assessed detailed mechanisms in relation to NAR. In aox1a/pgr5, photosystem II parameters decreased under HL, whereas respiratory O2 uptake rates increased. Some intermediates in the tricarboxylic acid (TCA) cycle and Calvin cycle decreased in aox1a/pgr5, whereas γ-aminobutyric acid (GABA) and N-rich amino acids increased in aox1a/pgr5. Under HL, AOX may have an important role in dissipating excess reductants to prevent the reduction of photosynthetic electron transport and imbalance in primary metabolite levels.
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Wang QW, Daumal M, Nagano S, Yoshida N, Morinaga SI, Hikosaka K. Plasticity of functional traits and optimality of biomass allocation in elevational ecotypes of Arabidopsis halleri grown at different soil nutrient availabilities. JOURNAL OF PLANT RESEARCH 2019; 132:237-249. [PMID: 30721383 DOI: 10.1007/s10265-019-01088-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2018] [Accepted: 01/07/2019] [Indexed: 06/09/2023]
Abstract
In mountainous areas, plant distribution is constrained by various environmental stresses. Plasticity and constancy in plant functional traits may relate to optimal strategies at respective habitats and to ecotypic differentiation along elevation. Although plant biomass allocation has been extensively studied in relation to adaptation to soil nutrient availability along elevation, its optimality is still poorly understood. We examined soil nutrient availability in the field and conducted growth analysis for two elevational ecotypes of Arabidopsis halleri grown under different nutrient availabilities. We determined plasticity in morphological and physiological traits and evaluated optimal biomass allocation using an optimality model. Our field investigation indicated that soil nitrogen (N) availability increased rather than decreased with increasing elevation. Our growth analysis revealed that lowland ecotype was more plastic in morphological variables and N concentrations, whereas the highland ecotype was more plastic in other physiological variables such as the net assimilation rate (NAR). The leaf mass ratio (LMR) in the lowland ecotype was moderately plastic at the whole range of N availabilities, whereas LMR in the highland ecotype was very plastic at higher N availabilities only. The optimality model indicated that the LMR of the lowland ecotype was nearly optimal throughout the range of studied N availabilities, whereas that of the highland ecotype was suboptimal at low N availability. These results suggest that highland ecotype is adapted only to high N availability, whereas the lowland ecotype is adapted to a relatively wide range of N availabilities as a result of natural selection in their respective habitats. We conclude that an adaptive differentiation has occurred between the two ecotypes and plasticity in the biomass allocation is directly related to its optimization in changing environments.
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Affiliation(s)
- Qing-Wei Wang
- Graduate School of Life Sciences, Tohoku University, Aoba, Sendai, 980-8578, Japan.
- Forestry and Forest Products Research Institute, 1 Matsunosato, Tsukuba, Ibaraki, 305-8687, Japan.
| | - Maya Daumal
- Graduate School of Life Sciences, Tohoku University, Aoba, Sendai, 980-8578, Japan
| | - Soichiro Nagano
- Forest Tree Breeding Center, Forestry and Forest Products Research Institute, 3809-1 Ishi, Juo, Hitachi, Ibaraki, 319-1301, Japan
| | - Naofumi Yoshida
- Faculty of Science, Tohoku University, Aoba, Sendai, 980-8578, Japan
| | - Shin-Ichi Morinaga
- College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa, 252-0880, Japan
| | - Kouki Hikosaka
- Graduate School of Life Sciences, Tohoku University, Aoba, Sendai, 980-8578, Japan
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Xiong G, Zhang A, Fan D, Ge J, Yang D, Xie Z, Zhang W. Functional coordination between leaf traits and biomass allocation and growth of four herbaceous species in a newly established reservoir riparian ecosystem in China. Ecol Evol 2018; 8:11372-11384. [PMID: 30598742 PMCID: PMC6303726 DOI: 10.1002/ece3.4494] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Revised: 06/25/2018] [Accepted: 07/14/2018] [Indexed: 01/21/2023] Open
Abstract
The flood-dry-flood cycle in the reservoir riparian zone (RRZ) of the Three Gorges Dam has dramatically altered the riparian ecosystem structure and composition. Previous field studies have shown that leaf traits varied greatly and were restricted to the lower-investment and faster-return end of the global leaf spectrum, which are typical characteristics of fast-growing species. However, it is unclear as to the mechanism underpinning the growth potential of these species and how it will respond to soil nutrient availability and temperature. Here, we linked the plant functional traits of four representative dominant C4 herbaceous species (Setaria viridis, Echinochloa crusgalli, Cynodon dactylon and Hemarthria altissima) to their relative growth rates (RGR) under ambient and elevated temperatures, with different nitrogen and phosphorus levels, to explore the potential mechanism of species growth in the newly established reservoir riparian ecosystem in the Three Gorges Reservoir Area, China. We grew seedlings of these species in four open-top chambers, with three levels of nutrient supplies under two temperature gradients (ambient temperature and an elevated temperature of 4°C). We found that the responses of the RGR and plant traits to soil N and P supply levels and temperature varied considerably among studied species. E. crusgalli displayed the lowest RGR associated with relatively low specific leaf area (SLA), leaf nitrogen content (LN), stem mass ratio (SMR), and high leaf mass ratio (LMR) and was less affected by soil N and P supply levels and temperature. C. dactylon and H. altissima showed the highest RGR compared to the other two species grown at the substrate of N = 0.4 mg/g, P = 0.2 mg/g at ambient air temperature, associated with a relatively high SMR, low LMR and low plant carbon content (PCC). However, the RGR advantage of the two species was diminished at elevated temperatures, while S. viridis showed the highest RGR compared to the other species. Across all datasets, the RGR had no association with the leaf area ratio (LAR) and SLA. The RGR also showed no significant relationships with the LN and leaf phosphorus content (LP). On the other hand, the RGR was captured adequately by the SMR, which can therefore be considered as a powerful functional marker of species' functioning in this newly established reservoir riparian ecosystem. Our study provides some insight into the underlying mechanisms of species growth in reservoir riparian ecosystems.
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Affiliation(s)
- Gaoming Xiong
- The Key Laboratory of Oasis Eco‐agricultureXinjiang Production and Construction CorpsShihezi UniversityShiheziChina
- State Key Laboratory of Vegetation and Environmental ChangeInstitute of BotanyChinese Academy of SciencesXiangshan, BeijingChina
| | - Aiying Zhang
- State Key Laboratory of Vegetation and Environmental ChangeInstitute of BotanyChinese Academy of SciencesXiangshan, BeijingChina
| | - Dayong Fan
- State Key Laboratory of Vegetation and Environmental ChangeInstitute of BotanyChinese Academy of SciencesXiangshan, BeijingChina
| | - Jielin Ge
- State Key Laboratory of Vegetation and Environmental ChangeInstitute of BotanyChinese Academy of SciencesXiangshan, BeijingChina
| | - Dan Yang
- State Key Laboratory of Vegetation and Environmental ChangeInstitute of BotanyChinese Academy of SciencesXiangshan, BeijingChina
| | - Zongqiang Xie
- State Key Laboratory of Vegetation and Environmental ChangeInstitute of BotanyChinese Academy of SciencesXiangshan, BeijingChina
| | - Wangfeng Zhang
- The Key Laboratory of Oasis Eco‐agricultureXinjiang Production and Construction CorpsShihezi UniversityShiheziChina
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Ozaki H, Oguchi R, Hikosaka K. Dependence of functional traits related to growth rates and their CO 2 response on multiple habitat climate factors across Arabidopsis thaliana populations. JOURNAL OF PLANT RESEARCH 2018; 131:987-999. [PMID: 30046937 DOI: 10.1007/s10265-018-1058-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Accepted: 07/06/2018] [Indexed: 06/08/2023]
Abstract
The values of many plant traits are often different even within a species as a result of local adaptation. Here, we studied how multiple climate variables influence trait values in Arabidopsis thaliana grown under common conditions. We examined 9 climate variables and 29 traits related to vegetative growth rate in 44 global A. thaliana accessions grown at ambient or elevated CO2 concentration ([CO2]) and applied a multiple regression analysis. We found that genetic variations in the traits related to growth rates were associated with various climate variables. At ambient [CO2], plant size was positively correlated with precipitation in the original habitat. This may be a result of larger biomass investment in roots at the initial stage in plants adapting to a lower precipitation. Stomatal conductance and photosynthetic nitrogen use efficiency were negatively correlated with vapor pressure deficit, probably as a result of the trade-off between photosynthetic water- and nitrogen-use efficiency. These results suggest that precipitation and air humidity influence belowground and aboveground traits, respectively. Elevated [CO2] altered climate dependences in some of the studied traits. The CO2 response of relative growth rate was negatively correlated with altitude, indicating that plants inhabiting a higher altitude have less plasticity to changing [CO2]. These results are useful not only for understanding evolutionary process but also to predict the plant species that are favored under future global change.
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Affiliation(s)
- Hiroshi Ozaki
- Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8578, Japan.
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
| | - Riichi Oguchi
- Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8578, Japan
| | - Kouki Hikosaka
- Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, 980-8578, Japan
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