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For: Cavalier-Smith T, Chao EE, Lewis R. Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria. Protoplasma 2018;255:1517-1574. [PMID: 29666938 PMCID: PMC6133090 DOI: 10.1007/s00709-018-1241-1] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Accepted: 03/12/2018] [Indexed: 05/18/2023]
Number Cited by Other Article(s)
1
Hale B, Watts C, Conatser M, Brown E, Wijeratne AJ. Fine-scale characterization of the soybean rhizosphere microbiome via synthetic long reads and avidity sequencing. ENVIRONMENTAL MICROBIOME 2024;19:46. [PMID: 38997772 PMCID: PMC11241880 DOI: 10.1186/s40793-024-00590-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Accepted: 07/03/2024] [Indexed: 07/14/2024]
2
Hiltunen Thorén M, Onuț-Brännström I, Alfjorden A, Pecková H, Swords F, Hooper C, Holzer AS, Bass D, Burki F. Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria. BMC Biol 2024;22:103. [PMID: 38702750 PMCID: PMC11069148 DOI: 10.1186/s12915-024-01898-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Accepted: 04/22/2024] [Indexed: 05/06/2024]  Open
3
Shiratori T, Ishida KI. Rhabdamoeba marina is a heterotrophic relative of chlorarachnid algae. J Eukaryot Microbiol 2024;71:e13010. [PMID: 37941507 DOI: 10.1111/jeu.13010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 10/27/2023] [Indexed: 11/10/2023]
4
Bernhard JM, Fisher LA, Murphy Q, Sen L, Yeh HD, Louyakis A, Gomaa F, Reilly M, Batta-Lona PG, Bucklin A, Le Roux V, Visscher PT. Transition from stromatolite to thrombolite fabric: potential role for reticulopodial protists in lake microbialites of a Proterozoic ecosystem analog. Front Microbiol 2023;14:1210781. [PMID: 37965561 PMCID: PMC10642914 DOI: 10.3389/fmicb.2023.1210781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2023] [Accepted: 10/05/2023] [Indexed: 11/16/2023]  Open
5
Shshkin-Skar Y. Reschetnjakaera nom. n. (gen.) pro Schizodiscus Dogiel 1952 non Clarke 1888, nec Kittl 1891, nec Kishinouye 1902 (Polycystina, Birifrangentia, Rhizaria), with the six new combinations and notes on the name Birifrangentia. Zootaxa 2023;5351:497-500. [PMID: 38221470 DOI: 10.11646/zootaxa.5351.4.8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Indexed: 01/16/2024]
6
Garvetto A, Murúa P, Kirchmair M, Salvenmoser W, Hittorf M, Ciaghi S, Harikrishnan SL, Gachon CMM, Burns JA, Neuhauser S. Phagocytosis underpins the biotrophic lifestyle of intracellular parasites in the class Phytomyxea (Rhizaria). THE NEW PHYTOLOGIST 2023;238:2130-2143. [PMID: 36810975 PMCID: PMC10953367 DOI: 10.1111/nph.18828] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 02/06/2023] [Indexed: 05/04/2023]
7
The Status of Molecular Analyses of Isolates of Acanthamoeba Maintained by International Culture Collections. Microorganisms 2023;11:microorganisms11020295. [PMID: 36838260 PMCID: PMC9961329 DOI: 10.3390/microorganisms11020295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 01/04/2023] [Accepted: 01/18/2023] [Indexed: 01/26/2023]  Open
8
Situ J, Xi P, Lin L, Huang W, Song Y, Jiang Z, Kong G. Signal and regulatory mechanisms involved in spore development of Phytophthora and Peronophythora. Front Microbiol 2022;13:984672. [PMID: 36160220 PMCID: PMC9500583 DOI: 10.3389/fmicb.2022.984672] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Accepted: 08/23/2022] [Indexed: 11/13/2022]  Open
9
Gerbracht JV, Harding T, Simpson AGB, Roger AJ, Hess S. Comparative transcriptomics reveals the molecular toolkit used by an algivorous protist for cell wall perforation. Curr Biol 2022;32:3374-3384.e5. [PMID: 35700733 DOI: 10.1016/j.cub.2022.05.049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Revised: 04/11/2022] [Accepted: 05/18/2022] [Indexed: 10/18/2022]
10
Cavalier-Smith T. Ciliary transition zone evolution and the root of the eukaryote tree: implications for opisthokont origin and classification of kingdoms Protozoa, Plantae, and Fungi. PROTOPLASMA 2022;259:487-593. [PMID: 34940909 PMCID: PMC9010356 DOI: 10.1007/s00709-021-01665-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Accepted: 05/03/2021] [Indexed: 05/19/2023]
11
Goleń J, Tyszka J, Godos K, Janse M. A Model of F-actin Organization in Granuloreticulopodia in Foraminifera: Morphogenetic and Evolutionary Implications from Novel Fluorescent and Polarised Light Observations. Protist 2022;173:125886. [DOI: 10.1016/j.protis.2022.125886] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Revised: 04/22/2022] [Accepted: 05/08/2022] [Indexed: 11/29/2022]
12
Biard T. Diversity and ecology of Radiolaria in modern oceans. Environ Microbiol 2022;24:2179-2200. [PMID: 35412019 PMCID: PMC9322464 DOI: 10.1111/1462-2920.16004] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Revised: 04/04/2022] [Accepted: 04/05/2022] [Indexed: 11/30/2022]
13
Dumack K, Gerdzhikov D, Klisarova D. Phylogenetic analysis confirms the taxonomic placement of the marine flagellate Hermesinum adriaticum (Thecofilosea, Cercozoa, Rhizaria). J Eukaryot Microbiol 2022;69:e12905. [PMID: 35303760 DOI: 10.1111/jeu.12905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
14
Struck C, Rüsch S, Strehlow B. Control Strategies of Clubroot Disease Caused by Plasmodiophora brassicae. Microorganisms 2022;10:620. [PMID: 35336194 PMCID: PMC8949847 DOI: 10.3390/microorganisms10030620] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Revised: 02/17/2022] [Accepted: 03/11/2022] [Indexed: 12/04/2022]  Open
15
Autophagy-Related Gene PlATG6a Is Involved in Mycelial Growth, Asexual Reproduction and Tolerance to Salt and Oxidative Stresses in Peronophythora litchii. Int J Mol Sci 2022;23:ijms23031839. [PMID: 35163762 PMCID: PMC8836449 DOI: 10.3390/ijms23031839] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Revised: 12/16/2021] [Accepted: 01/27/2022] [Indexed: 02/05/2023]  Open
16
Dumack K, Siemensma F, Clauß S. Transfer of the thecate amoebae Lecythium spinosum and Pamphagus armatus to Rhizaspis (Thecofilosea, Cercozoa, Rhizaria). Eur J Protistol 2021;83:125843. [PMID: 34920934 DOI: 10.1016/j.ejop.2021.125843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Revised: 08/17/2021] [Accepted: 09/21/2021] [Indexed: 11/03/2022]
17
PhyloFisher: A phylogenomic package for resolving eukaryotic relationships. PLoS Biol 2021;19:e3001365. [PMID: 34358228 PMCID: PMC8345874 DOI: 10.1371/journal.pbio.3001365] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 07/15/2021] [Indexed: 11/19/2022]  Open
18
Correa-Galeote D, Roibás A, Mosquera-Corral A, Juárez-Jiménez B, González-López J, Rodelas B. Salinity is the major driver of the global eukaryotic community structure in fish-canning wastewater treatment plants. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021;290:112623. [PMID: 33901822 DOI: 10.1016/j.jenvman.2021.112623] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2020] [Revised: 04/05/2021] [Accepted: 04/11/2021] [Indexed: 06/12/2023]
19
Walden S, Jauss RT, Feng K, Fiore-Donno AM, Dumack K, Schaffer S, Wolf R, Schlegel M, Bonkowski M. On the phenology of protists: recurrent patterns reveal seasonal variation of protistan (Rhizaria: Cercozoa and Endomyxa) communities in tree canopies. FEMS Microbiol Ecol 2021;97:fiab081. [PMID: 34117748 PMCID: PMC8213970 DOI: 10.1093/femsec/fiab081] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Accepted: 06/10/2021] [Indexed: 11/23/2022]  Open
20
Jauss RT, Nowack A, Walden S, Wolf R, Schaffer S, Schellbach B, Bonkowski M, Schlegel M. To the canopy and beyond: Air dispersal as a mechanism of ubiquitous protistan pathogen assembly in tree canopies. Eur J Protistol 2021;80:125805. [PMID: 34090087 DOI: 10.1016/j.ejop.2021.125805] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Revised: 05/07/2021] [Accepted: 05/11/2021] [Indexed: 01/19/2023]
21
Tria FDK, Brueckner J, Skejo J, Xavier JC, Kapust N, Knopp M, Wimmer JLE, Nagies FSP, Zimorski V, Gould SB, Garg SG, Martin WF. Gene Duplications Trace Mitochondria to the Onset of Eukaryote Complexity. Genome Biol Evol 2021;13:evab055. [PMID: 33739376 PMCID: PMC8175051 DOI: 10.1093/gbe/evab055] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/14/2021] [Indexed: 12/15/2022]  Open
22
Shishkin Y, Drachko D, Zlatogursky VV. The smallest known heliozoans are the Erebor lineage (nom. clad. n.) inside Microheliella maris (Eukaryota, Diaphoretickes), with the amendation of M. maris diagnosis and description of Berkeleyaesol magnus gen. nov., comb. nov. (Eukaryota, incertae sedis). Int J Syst Evol Microbiol 2021;71. [PMID: 33886450 DOI: 10.1099/ijsem.0.004776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
23
A Morpho-molecular Perspective on the Diversity and Evolution of Spumellaria (Radiolaria). Protist 2021;172:125806. [PMID: 34174720 DOI: 10.1016/j.protis.2021.125806] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Revised: 04/01/2021] [Accepted: 04/05/2021] [Indexed: 10/21/2022]
24
Pyrih J, Pánek T, Durante IM, Rašková V, Cimrhanzlová K, Kriegová E, Tsaousis AD, Eliáš M, Lukeš J. Vestiges of the Bacterial Signal Recognition Particle-Based Protein Targeting in Mitochondria. Mol Biol Evol 2021;38:3170-3187. [PMID: 33837778 PMCID: PMC8321541 DOI: 10.1093/molbev/msab090] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Revised: 02/23/2021] [Indexed: 12/22/2022]  Open
25
The Mitogen-Activated Protein Kinase PlMAPK2 Is Involved in Zoosporogenesis and Pathogenicity of Peronophythoralitchii. Int J Mol Sci 2021;22:ijms22073524. [PMID: 33805371 PMCID: PMC8036616 DOI: 10.3390/ijms22073524] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 03/21/2021] [Accepted: 03/24/2021] [Indexed: 11/16/2022]  Open
26
Pyrih J, Žárský V, Fellows JD, Grosche C, Wloga D, Striepen B, Maier UG, Tachezy J. The iron-sulfur scaffold protein HCF101 unveils the complexity of organellar evolution in SAR, Haptista and Cryptista. BMC Ecol Evol 2021;21:46. [PMID: 33740894 PMCID: PMC7980591 DOI: 10.1186/s12862-021-01777-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Accepted: 03/08/2021] [Indexed: 11/22/2022]  Open
27
Wan KY, Jékely G. Origins of eukaryotic excitability. Philos Trans R Soc Lond B Biol Sci 2021;376:20190758. [PMID: 33487111 PMCID: PMC7935092 DOI: 10.1098/rstb.2019.0758] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/10/2020] [Indexed: 12/16/2022]  Open
28
Reyes-Batlle M, Díaz FJ, Sifaoui I, Rodríguez-Expósito R, Rizo-Liendo A, Piñero JE, Lorenzo-Morales J. Free living amoebae isolation in irrigation waters and soils of an insular arid agroecosystem. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021;753:141833. [PMID: 33207478 DOI: 10.1016/j.scitotenv.2020.141833] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Revised: 08/18/2020] [Accepted: 08/18/2020] [Indexed: 06/11/2023]
29
Huang J, Chen J, Fang G, Pang L, Zhou S, Zhou Y, Pan Z, Zhang Q, Sheng Y, Lu Y, Liu Z, Zhang Y, Li G, Shi M, Chen X, Zhan S. Two novel venom proteins underlie divergent parasitic strategies between a generalist and a specialist parasite. Nat Commun 2021;12:234. [PMID: 33431897 PMCID: PMC7801585 DOI: 10.1038/s41467-020-20332-8] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2020] [Accepted: 11/25/2020] [Indexed: 12/23/2022]  Open
30
Dumack K, Duckert C, Meinhardt R, Lara E, Bonkowski M. Description of Phaeobola aeris gen. nov., sp. nov (Rhizaria, Cercozoa, Euglyphida) Sheds Light on Euglyphida's Dark Matter. J Eukaryot Microbiol 2020;68:e12835. [PMID: 33222324 DOI: 10.1111/jeu.12835] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 10/06/2020] [Accepted: 10/26/2020] [Indexed: 11/30/2022]
31
Haplosporosomes, sporoplasmosomes and their putative taxonomic relationships in rhizarians and myxozoans. Parasitology 2020;147:1614-1628. [PMID: 32943127 DOI: 10.1017/s0031182020001717] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
32
Fiore-Donno AM, Richter-Heitmann T, Bonkowski M. Contrasting Responses of Protistan Plant Parasites and Phagotrophs to Ecosystems, Land Management and Soil Properties. Front Microbiol 2020;11:1823. [PMID: 32849427 PMCID: PMC7422690 DOI: 10.3389/fmicb.2020.01823] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Accepted: 07/10/2020] [Indexed: 11/13/2022]  Open
33
Lara E, Dumack K, García-Martín JM, Kudryavtsev A, Kosakyan A. Amoeboid protist systematics: A report on the "Systematics of amoeboid protists" symposium at the VIIIth ECOP/ISOP meeting in Rome, 2019. Eur J Protistol 2020;76:125727. [PMID: 32755801 DOI: 10.1016/j.ejop.2020.125727] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2020] [Revised: 05/22/2020] [Accepted: 06/25/2020] [Indexed: 01/21/2023]
34
Kumler WE, Jorge J, Kim PM, Iftekhar N, Koehl MAR. Does Formation of Multicellular Colonies by Choanoflagellates Affect Their Susceptibility to Capture by Passive Protozoan Predators? J Eukaryot Microbiol 2020;67:555-565. [PMID: 32455487 DOI: 10.1111/jeu.12808] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 04/17/2020] [Accepted: 05/14/2020] [Indexed: 01/20/2023]
35
The Basic Leucine Zipper Transcription Factor PlBZP32 Associated with the Oxidative Stress Response Is Critical for Pathogenicity of the Lychee Downy Blight Oomycete Peronophythora litchii. mSphere 2020;5:5/3/e00261-20. [PMID: 32493721 PMCID: PMC7273347 DOI: 10.1128/msphere.00261-20] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
36
Shiratori T, Yabuki A, Ishida KI. Morphology, Ultrastructure, and Phylogeny of Two Novel Species of Ventrifissura (V. oblonga n. sp. and V. velata n. sp., Thecofilosea, Cercozoa). Protist 2020;171:125731. [PMID: 32464531 DOI: 10.1016/j.protis.2020.125731] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2019] [Revised: 02/05/2020] [Accepted: 04/03/2020] [Indexed: 10/24/2022]
37
Cavalier-Smith T, Chao EEY. Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria). PROTOPLASMA 2020. [PMID: 31900730 DOI: 10.1007/s00709-019-01442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
38
Cavalier-Smith T, Chao EEY. Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria). PROTOPLASMA 2020;257:621-753. [PMID: 31900730 PMCID: PMC7203096 DOI: 10.1007/s00709-019-01442-7] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Accepted: 09/19/2019] [Indexed: 05/02/2023]
39
Dumack K, Siemensma F. Shell Colour in Cercozoa; a Simple Trait to Distinguish Thecofilosea from Imbricatea? Protist 2020;171:125718. [DOI: 10.1016/j.protis.2020.125718] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Revised: 01/29/2020] [Accepted: 02/10/2020] [Indexed: 01/29/2023]
40
Siemensma F, Dumack K. SSU rDNA Phylogeny Indicates the Scale-lacking Trivalvulariida ord. nov. as a Sister Group to the Euglyphida (Cercozoa, Rhizaria). Protist 2020;171:125701. [DOI: 10.1016/j.protis.2019.125701] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Revised: 11/13/2019] [Accepted: 11/14/2019] [Indexed: 01/21/2023]
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Dumack K, Fiore‐Donno AM, Bass D, Bonkowski M. Making sense of environmental sequencing data: Ecologically important functional traits of the protistan groups Cercozoa and Endomyxa (Rhizaria). Mol Ecol Resour 2019;20:398-403. [DOI: 10.1111/1755-0998.13112] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2019] [Revised: 10/21/2019] [Accepted: 10/28/2019] [Indexed: 11/26/2022]
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The architecture of the Plasmodiophora brassicae nuclear and mitochondrial genomes. Sci Rep 2019;9:15753. [PMID: 31673019 PMCID: PMC6823432 DOI: 10.1038/s41598-019-52274-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2019] [Accepted: 10/15/2019] [Indexed: 11/09/2022]  Open
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Burki F, Roger AJ, Brown MW, Simpson AGB. The New Tree of Eukaryotes. Trends Ecol Evol 2019;35:43-55. [PMID: 31606140 DOI: 10.1016/j.tree.2019.08.008] [Citation(s) in RCA: 412] [Impact Index Per Article: 82.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2019] [Revised: 08/15/2019] [Accepted: 08/15/2019] [Indexed: 01/01/2023]
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Strassert JFH, Jamy M, Mylnikov AP, Tikhonenkov DV, Burki F. New Phylogenomic Analysis of the Enigmatic Phylum Telonemia Further Resolves the Eukaryote Tree of Life. Mol Biol Evol 2019;36:757-765. [PMID: 30668767 PMCID: PMC6844682 DOI: 10.1093/molbev/msz012] [Citation(s) in RCA: 61] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
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Irwin NA, Tikhonenkov DV, Hehenberger E, Mylnikov AP, Burki F, Keeling PJ. Phylogenomics supports the monophyly of the Cercozoa. Mol Phylogenet Evol 2019;130:416-423. [DOI: 10.1016/j.ympev.2018.09.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2018] [Accepted: 09/06/2018] [Indexed: 01/09/2023]
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Nick P. Ars comparandi: "molecular convergence" versus "functional homology". PROTOPLASMA 2018;255:1263-1265. [PMID: 30120564 DOI: 10.1007/s00709-018-1301-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2018] [Accepted: 08/13/2018] [Indexed: 06/08/2023]
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