Biological invasions undermine the functional diversity of fish community in a large subtropical river

Divergent temporal responses of native macroinvertebrate communities to biological invasions

Biological invasions pose a major threat to biodiversity, ecosystem functioning, and human well-being. Non-native species can have severe ecological impacts that are transformative, affecting ecosystems across both short-term and long-term timescales. However, few studies have determined the temporal dynamics of impact between these scales, impeding future predictions as invasion rates continue to rise. Our study uses a meta-analytical approach to dissect the changing taxonomic and functional impacts of biological invasions on native macroinvertebrate populations and communities in freshwater ecosystems across Europe, using a recently collated European long-term time series spanning several decades. Our findings reveal a complex temporal pattern: while initial stages of invasions (i.e. five years after the first record of non-native species) often exhibited benign impacts on macroinvertebrate abundance, richness, or functional diversity, the long-term (i.e. the period following the early invasion) effects became predominantly negative. This pattern was consistent between taxonomic and functional metrics for impacts at both the population and species level, with taxonomic metrics initially positively affected by invasions and functional metrics being more stable before also declining. These results suggest that even initially benign or positively perceived impacts could be eventually superseded by negative consequences. Therefore, understanding the magnitude of invasion effects increasingly requires long-term studies spanning several years or decades to offer insights into effective conservation strategies prioritising immediate and future biodiversity protection efforts. These findings also highlight the importance of integrating multiple taxonomic, functional and temporal components to inform adaptive management approaches to mitigate the negative effects of current and future biological invasions.

Assessing the role of non-native species and artificial water bodies on the trophic and functional niche of Mediterranean freshwater fish communities

Habitat alterations and the introduction of non-native species have many ecological impacts, including the loss of biodiversity and a deterioration of ecosystem functioning. The effects of these combined stressors on the community trophic web and functional niche are, however, not completely clear. Here, we investigated how artificial ecosystems (i.e. reservoirs) and non-native species may influence the trophic and functional niche space of freshwater fish communities. To do so, we used carbon and nitrogen stable isotope and abundance data to compute a set of isotopic, trait, and functional metrics for 13 fish communities sampled from 12 distinct ecosystems in Türkiye. We show that in reservoirs, fish were more similar in their trophic niche compared to lakes, where the trophic niche was more variable, due to higher habitat complexity. However, there were no differences in the trait and functional metrics between the two ecosystem types, suggesting a higher prey diversity than assumed in reservoirs. We also found that the number of non-native species did not affect the trophic niche space, nor the trait or functional space occupied by the fish community. This indicates that non-native species tended to overlap their trophic niche with native species, while occupying empty functional niches in the recipient community functional space. Similarly, the proportion of non-native species did not affect any trophic, trait, or functional metric, suggesting that changes in community composition were not reflected in changes in the community niche space. Moreover, we found that trait richness, but not functional richness, was positively related to the isotopic niche width and diversity, indicating that a wider occupied trait niche space corresponded with a wider occupied trophic niche and lesser interspecific similarity. Our findings underscore the complexity of ecological relationships within freshwater ecosystems and highlight the need for comprehensive management strategies to mitigate the impacts of human activities and biological invasions.

Functional diversity does not explain the co-occurrence of non-native species within a flow-modified African river system

Globally, there is growing concern on the occurrence of multiple non-native species within invaded habitats. Proliferation of multiple non-native species together with anthropogenic-driven habitat modifications raise questions on the mechanisms facilitating the co-occurrence of these species and their potential impact within the recipient systems. Using the Great Fish River system (South Africa) which is anthropogenically-modified by inter-basin water transfer (IBWT), as a case study, this research employed trait-based approaches to explore patterns associated with the co-occurrence of multiple non-native fish species. This was achieved by investigating the role of functional diversity of non-native and native fishes in relation to their composition, distribution and environmental relationships. Nineteen functional traits that defined two broad ecological attributes (habitat use and feeding) were determined for 13 fish species that comprised eight native and five non-native fishes. We used these data to, firstly, evaluate functional diversity patterns and to compare functional traits of native and non-native fishes in the Great Fish River system. Secondly, we employed multivariate ordination analyses (factor analysis, RLQ and fourth-corner analyses) to investigate interspecific trait variations and potential species-trait-environmental relationships. From a functional diversity perspective, there were no significant differences in most functional diversity indices between native and non-native species. Despite interspecific variation in body morphology-related traits, we also found no clear separation between native and non-native species based on the ordination analysis of the functional traits. Furthermore, while RLQ ordination showed broad spatial patterns, the fourth-corner analyses revealed no significant relationships among species distribution, functional traits and environmental variables. The weak species-trait-environment relationship observed in this study suggests that environmental filtering was likely a poor determinant of functional trait structure within the Great Fish River. Modification of the natural flow regime may have weakened the relationship between species traits and the environment as has been shown in other systems.

Whether including exotic species alters conservation prioritization: a case study in the Min River in southeastern China

Conservation practices from the perspective of functional diversity (FD) and conservation prioritization need to account for the impacts of exotic species in freshwater ecosystems. This work first simulated the influence of exotic species on the values of FD in a schemed mechanistic model, and then a practical case study of conservation prioritization was performed in the Min River, the largest river in southeastern China, to discuss whether including exotic species alters prioritization. The mechanistic model revealed that exotic species significantly altered the expected FD if the number of exotic species occupied 2% of the community. Joint species distribution modelling indicated that the highest FD occurred in the west, northwest and north upstreams of the Min River. Values of FD in 64.69% of the basin decreased after the exotic species were removed from calculation. Conservation prioritization with the Zonation software proved that if first the habitats of exotic species were removed during prioritization, 62.75% of the highest prioritized areas were shifted, average species representation of the endemic species was improved and mean conservation efficiency was increased by 7.53%. Existence of exotic species will significantly alter the metrics of biodiversity and the solution for conservation prioritization, and negatively weighting exotic species in the scope of conservation prioritization is suggested to better protect endemic species. This work advocates a thorough estimate of the impacts of exotic species on FD and conservation prioritization, providing complementary evidence for conservation biology and valuable implications for local freshwater fish conservation.

Environmental DNA biomonitoring reveals the human impacts on native and non-native fish communities in subtropical river systems

Subtropical rivers are one of the hotspots of global biodiversity, facing increased risks of fish diversity changes and species extinction. However, until now, human impacts on native and non-native fish communities in subtropical rivers still lack sufficient effort. Here, we used the environmental DNA (eDNA) approach to investigate fish communities in the Dongjiang River of southeast China, a typical subtropical river, and explored the effects of regional land use and local water pollution on fish taxonomic and functional diversity. Our data showed that 90 species or genera of native fish and 15 species or genera of non-native fish were detected by the eDNA approach, and there was over 85% overlap between eDNA datasets and historical records. The taxonomic and functional diversity of all, native and non-native fish communities showed consistent spatial patterns, that is, the upstream of the tributary was significantly higher than that of the mainstream and downstream. Land use and water pollution such as COD and TP were the determinants in shaping the spatial structure of fish communities, and water pollution explained 31.56%, 29.88%, and 27.80% of the structural variation in all, native and non-native fish communities, respectively. The Shannon diversity and functional richness of native fish showed a significant downward trend driven by COD (pShannon = 0.0374; pfunctional = 0.0215) and land use (pShannon = 0.0159; pfunctional = 0.0441), but they did not have significant impacts on non-native fish communities. Overall, this study emphasizes the inconsistent response of native and non-native fish communities to human impacts in subtropical rivers, and managers need to develop strategies tailored to specific fish species to effectively protect water security and rivers.

Anthropogenic activities and environmental filtering have reshaped freshwater fish biodiversity patterns in China over the past 120 years

Over the past centuries, freshwater fish introductions and extinctions have been the major environmental and ecological crises in various water bodies in China. However, consequences of such crises on freshwater fish biodiversity in China remain only partially or locally studied. Furthermore, identifications of relatively sensitive areas along with stressors (i.e., environmental and anthropogenic drivers) influencing freshwater fish biodiversity patterns are still pending. Taxonomic, functional, and phylogenetic facets of biodiversity can well describe and evaluate the underlying processes affecting freshwater fish biodiversity patterns under different dimensionalities. Here we thus evaluated temporal changes in these facets of freshwater fish biodiversity as well as a new developed biodiversity index, multifaceted changes in fish biodiversity, for over a century at the basin level throughout China using both alpha and beta diversity approaches. We also identified the drivers influencing the changes in fish biodiversity patterns using random forest models. The results showed that fish assemblages in Northwest and Southwest China (e.g., Ili River basin, Tarim basin, and Erhai Lake basin) experienced extreme temporal and multifaceted changes in the facets of biodiversity compared with other regions, and environmental factors (e.g., net primary productivity, average annual precipitation, and unit area) largely drove these changes. Since fish faunas in over 80% of China's water bodies covering more than 80% of China's surface were currently undergoing taxonomic, functional, and phylogenetic homogenization, targeted conservation and management strategies should be proposed and implemented, especially for the areas with relatively high changes in biodiversity.

Habitat loss predicts the functional extinction of fish from Amazonian streams during the Anthropocene

The evaluation of extinction risk has typically focused on individual species, although a shift to a focus on ecosystem functioning would appear to be an urgent priority for conservation planning, especially considering that a sixth mass extinction event has already begun. In the present study, we investigated how fish extinction driven by habitat loss may modify the functioning of freshwater Amazonian ecosystems. We sampled the fish and environmental conditions of 63 streams in the eastern Amazon and simulated extinction based on the vulnerability of the species to habitat loss, which is the principal threat to tropical biodiversity. The simulated extinction of vulnerable species led to a decrease in both the mean body size of the community and functional rarity and culminated in abrupt losses of ecosystem functions after 5% and 10% of extinction at local and regional scales. Our functional approach demonstrated the progressive loss of ecological functions in Amazon streams, which may collapse altogether following the extinction of functions related to protection against biological invasions, and associated alterations in nutrient cycling and water quality. We provide robust predictions on the modification of the ecosystem following the extinction of fish species, which is a major step toward the development of effective conservation measures that ensure the avoidance of the predicted processes, and help to prevent the loss of biodiversity and the potentially irreversible modifications to ecosystem functioning.

Advancing biological invasion hypothesis testing using functional diversity indices

Pioneering investigations on the effects of introduced populations on community structure, ecosystem functioning and services have focused on the effects of invaders on taxonomic diversity. However, taxonomic-based diversity metrics overlook the heterogeneity of species roles within and among communities. As the homogenizing effects of biological invasions on community and ecosystem processes can be subtle, they may require the use of functional diversity indices to be properly evidenced. Starting from the listing of major functional diversity indices, alongside the presentation of their strengths and limitations, we focus on studies pertaining to the effects of invasive species on native communities and recipient ecosystems using functional diversity indices. By doing so, we reveal that functional diversity of the recipient community may strongly vary at the onset of the invasion process, while it stabilizes at intermediate and high levels of invasion. As functional changes occurring during the lag phase of an invasion have been poorly investigated, we show that it is still unknown whether there are consistent changes in functional diversity metrics that could indicate the end of the lag phase. Thus, we recommend providing information on the invasion stage under consideration when computing functional diversity metrics. For the existing literature, it is also surprising that very few studies explored the functional difference between organisms from the recipient communities and invaders of the same trophic levels, or assessed the effects of non-native organism establishment into a non-analogue versus an analogue community. By providing valuable tools for obtaining in-depth diagnostics of community structure and functioning, functional diversity indices can be applied for timely implementation of restoration plans and improved conservation strategies. To conclude, our work provides a first synthetic guide for their use in hypothesis testing in invasion biology.

Profiling insular vertebrates prone to biological invasions: What makes them vulnerable?

Invasive alien species (IAS) are a major threat to insular vertebrates, although the ecological characteristics that make insular communities vulnerable to IAS are poorly understood. After describing the ecological strategies of 6015 insular amphibians, birds, lizards, and mammals, we assessed the functional and ecological features of vertebrates exposed to IAS. We found that at least 50% of insular amphibian functional richness was hosted by IAS-threatened amphibians and up to 29% for birds. Moreover, all IAS-threatened groups except birds harbored a higher functional richness than species groups threatened by other threats. Disentangling the ecological strategies threatened by IAS, compared to those associated with other threats, we showed that birds, lizards, and mammals were more likely to be terrestrial foragers and amphibians to have larval development. By contrast, large-bodied species and habitat specialists were universally threatened. By considering the functional aspect of threatened insular diversity, our work improves our understanding of global IAS impacts. This new dimension proves essential for undertaking relevant and effective conservation actions.

Invasion Risk and Potential Impact of Alien Freshwater Fishes on Native Counterparts in Klang Valley, Malaysia

Simple Summary

The mechanisms on how alien species naturally affect the native species in the real aquatic environment are infrequently studied. This study explores the potential effects of alien fishes on the native fish community, well-being, and trophic preferences in selected rivers of Klang Valley, Malaysia. We found that alien fishes benefited from the impacts of anthropogenic activities in their surrounding habitats, while their plasticity in feeding habits might help them to invade, survive, and dominate. This study revealed the natural mechanisms on the establishment of alien fish species and their potential ecological impacts on native fishes in the rivers of Klang Valley, Malaysia.

Abstract

This study explores the potential effects of alien fishes on the native fish community, well-being, and tropic preferences in selected rivers of Klang Valley, Malaysia. Following the Aquatic Species Invasiveness Screening Kit assessment, most of the alien fishes (80%) are invasive. The alien species occurrences correlated positively (p < 0.05) with poor water quality, such as rivers with high ammonia-nitrogen and nitrite, but negatively with phosphate and dissolved oxygen. Anthropogenic characteristics, such as rivers with high pollution levels and ease of accessibility to the fish habitat, are mainly associated positively (p < 0.05) with the occurrences of alien fish species. In general, the results of fish stomach contents analyses and their associated indices, together with stable carbon and nitrogen isotopes, revealed domination by alien fishes or diet overlaps between both alien and native fish species. This finding indicates that alien fishes benefited from the impacts of the anthropogenic activities in their surrounding habitats, while their plasticity in feeding habits might help them to invade, survive, and dominate in the rivers of Klang Valley, Malaysia.

Effects of dam construction and fish invasion on the species, functional and phylogenetic diversity of fish assemblages in the Yellow River Basin

An understanding of the consequences of human-mediated disturbances from multi-facet diversity (i.e. species, functional and phylogenetic) perspectives is of great significance in biodiversity assessment and conservation planning. Most previous studies have concentrated on anthropogenic effects on species diversity in the Yellow River Basin (YRB) in China, but information on anthropogenic effects on phylogenetic and functional facets is still pending. Here, we identified the temporal changes in species, functional, and phylogenetic alpha diversity of fish assemblages in 18 reaches (i.e. 15 mainstream reaches and 3 tributaries) of the YRB under the background of long-term cascade hydropower construction and widespread introduction of non-native fish species. The results showed that native fishes experienced a sharp decline through time, with an average of 25.6 (extirpation rate 46.7%) native species extirpated per sub-region, and 89 of 182 (48.9%) native species extirpated across the whole basin during the period considered. However, the number of non-native fish species substantially increased, with an average increase of 8.6 species (invasion rate 26.9%) per sub-region. Furthermore, the percentage of non-native species showed a significant unimodal relationship with average altitude, with highest invasion rates (ca. 70%) in upstream reaches. The extirpation rate was negatively related to altitude, increasing from upstream to downstream reaches. Interestingly, the functional diversity indices (FE_ve, FD_iv, FD_is, RaoQ) and phylogenetic diversity indices (Δ⁺ and Λ⁺) of the entire fish fauna significantly increased through time, whereas these indices based on native fish fauna only did not change. Such increases in functional and phylogenetic diversities were mainly triggered by introductions of non-native species, which were functionally distinct and phylogenetically distant from native species, and extirpation of congeneric endemic species. In general, the present study revealed anthropogenic impacts on the multi-faceted diversity of fish assemblages in a large river and highlighted the negative effects of cascaded hydropower developments and non-native fish invasions on native fish. Moreover, evaluating the responses of multi-faceted diversity to anthropogenic disturbances is a suitable means to understand assemblage reorganization and to assess how such impacts lead to the decline of biodiversity. The complementary information derived from using the multi-faceted diversity approach indicate functional and phylogenetic diversity measures could be implemented in biodiversity planning in the sediment-laden and ecologically important Yellow River Basin.

How Do Biological and Functional Diversity Change in Invaded Tropical Marine Rocky Reef Communities?

Evidence so far shows that most alien species (AS) have negative impacts on native biodiversity and are changing biodiversity in almost all environments. Here, we study eight rocky shores at four sites containing reefs with invaded communities and other not-invaded (control) communities, to evaluate the effects of four marine invasive species on biological and functional diversity. We used the adjustment and selection approach of species abundance distribution models (SAD), taxonomic diversity indices and functional diversity indices based on hierarchical grouping matrices (FD—Functional Diversity). In addition to comparing invaded and not-invaded communities, we also performed the same analysis, but removed the invaders (AS removed) from the matrices. The geometric-series model was best adjusted to the majority of communities. The diversity indices suggest that the taxonomic diversity is lower in invaded communities, while the functional diversity indices suggest a change in the functional space of invaded and not-invaded communities, with a greater amount of functional space filled by species in the not-invaded communities. Taxonomic and functional diversity indices were successful in identifying processes that determine the biological diversity of invaded communities, as they seem to obey a pattern that reflects the reduced diversity of invaded communities.

Functional response of fish communities in a multistressed freshwater world

Freshwater fish communities are impacted by multiple pressures, determining loss of functional diversity and redundancy. Our aim was to disentangle the roles and relevancies of different pressures in shaping fish communities in small streams of the Po plain (North Italy). Long term trend (1998-2018) of functional diversity of 31 fish communities was assessed and modeled in respect to three potential pressures: temperature increase, intensity of exotic fish invasion, and habitat quality degradation. Ecological traits mostly influenced by the pressures were also identified. Reduction of functional richness mostly due to local extinction or contraction of cold adapted predators, such as salmonids, was linked to increasing temperatures. Warming probably also led to a shift of generalist and dominant species, which became more abundant in streams hosting mixed communities of salmonids and cyprinids, and determined the increase of functional dispersion and uniqueness. Reduction of functional redundancy and increasing functional dispersion were both also related to the introduction of new ecological traits brought by expanding exotic species. Low functional overlap was found among native and exotic species, indicating that the invasion process was mainly controlled by competitive interactions and/or resource opportunism. Functional response to habitat quality was not clearly evident. In conclusion, the impact of temperature increase and exotic species on fish functional diversity was effective, idiosyncratic and mediated by the scale of analysis and by the intensity of pressures.

The role of species introduction in modifying the functional diversity of native communities

Although one of the most evident effects of biological invasions is the loss of native taxonomic diversity, contrasting views exist on the consequences of biological invasions on native functional diversity. We investigated this topic using Mediterranean stream, river and canal fish communities as a test case, at 3734 sites in Italy, and distinguishing between exotic and translocated species invasion in three different faunal districts. Our results clearly confirmed that introduced species were widespread and in many cases the invasion was severe (130 communities were completely composed by introduced species). Exotic and translocated fish species had substantially different geographical distribution patterns, perhaps arising from their differences in introduction timing, spread and invasion mechanisms. We also found a clear decreasing trend of functional dispersion along an invasion gradient, confirming our hypothesis that the invasion process can diminish the relative diversity of ecofunctional traits of host fish communities. Furthermore, our results suggested that exotic species might have a greater negative effect than translocated species on the relative diversity of ecofunctional traits of fish communities. This could also be linked to the fact that translocated species are more ecofunctionally similar to native ones, compared to the exotics. Our multivariate analysis of site-specific combinations of ecofunctional traits highlighted some traits characteristic of all invaded communities, while our discriminant analysis underlined how there was a substantial ecofunctional overlap between native, exotic and translocated species groups in most areas.

First study of food webs in a large glacial river: the trophic role of invasive trout

Abstract The aim of this study was to determine the food webs structure of a large Patagonian river in two river sections (Upstream and Midstream) and to evaluate isotopic overlap between native and introduced species. We used stable isotope analyses of δ15N and δ13C and stomach content. The Upstream section had a more complex food webs structure with a greater richness of macroinvertebrates and fish species than Midstream. Upstream basal resources were dominated by filamentous algae. Lake Trout were found to have a higher trophic position than all other fish species in that area although, the most abundant fish species, were Rainbow Trout. Depending on the life stage, Rainbow Trout shifted from prey to competitor/predator. In the Midstream section, the base of the food webs was dominated by coarse particulate organic matter, and adult Rainbow Trout had the highest trophic level. Isotopic values changed among macroinvertebrates and fish for both areas. The two most abundant native and invasive species — Puyen and Rainbow Trout — showed an isotopic separation in Midstream but did not in Upstream areas. The presence of invasive fish that occupy top trophic levels can have a significant impact on native fish populations that have great ecological importance in the region.

Exotic species invasions undermine regional functional diversity of freshwater fish

Exotic species invasions often result in native biodiversity loss, i.e. a lower taxonomic diversity, but current knowledge on invasions effects underlined a potential increase of functional diversity. We thus explored the connections between functional diversity and exotic species invasions, while accounting for their environmental drivers, using a fine-resolution large dataset of Mediterranean stream fish communities. While functional diversity of native and exotic species responded similarly to most environmental constraints, we found significant differences in the effects of altitude and in the different ranking of constraints. These differences suggest that invasion dynamics could play a role in overriding some major environmental drivers. Our results also showed that a lower diversity of ecological traits in communities (about half of less disturbed communities) corresponded to a high invasion degree, and that the exotic component of communities had typically less diverse ecological traits than the native one, even when accounting for stream order and species richness. Overall, our results suggest that possible outcomes of severe exotic species invasions could include a reduced functional diversity of invaded communities, but analyzing data with finer ecological, temporal and spatial resolutions would be needed to pinpoint the causal relationship between invasions and functional diversity.

Impacts of non-native fishes under a seasonal temperature gradient are forecasted using functional responses and abundances

Developing predictive methods to forecast the impacts of existing and emerging invasive species is of critical importance to biodiversity conservation. However, invader impacts are context-dependent, making reliable and robust predictions challenging. In particular, it is unclear how temporal variabilities in relation to temperature regime shifts influence invader ecological impacts. In the present study, we quantify the functional responses of three coexisting freshwater fishes: the native freshwater River Goby Glossogobiuscallidus, and the non-native Mozambique Tilapia Oreochromismossambicus and Western Mosquitofish Gambusiaaffinis, under two temperature treatments using chironomid larvae as prey. This was used along with fish abundance data to determine temporal differences in ecological impacts of each fish species between seasons (i.e. at two corresponding temperatures). All three fish species exhibited potentially population-destabilizing Type II functional responses. Their maximum feeding rates were consistently higher in the warm temperature treatment, whereas attack rates tended to be reduced. Non-native Mozambique Tilapia had the highest maximum feeding rate under both temperature treatments (18 °C and 25 °C), followed by the non-native Western Mosquitofish and lastly the native River Goby, suggesting greater per capita impacts on native prey by non-native fishes. The predatory fish abundances differed significantly according to season, with native River Goby and non-native Mozambique Tilapia generally more abundant than non-native Western Mosquitofish. By multiplying functional response maximum feeding rates with abundances of each fish species across the seasonal gradient, the relative impact potential of non-native Mozambique Tilapia was consistently higher compared to that of native gobies. Western Mosquitofish impacts were less apparent, owing to their low abundances. We demonstrate how seasonal temperature fluctuations affect the relative impact capacities of introduced species and the utility of consumer functional response and the relative impact potential metric in impact forecasting.