1
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Spalletta A, Joly N, Martin P. Latest Trends in Lipase-Catalyzed Synthesis of Ester Carbohydrate Surfactants: From Key Parameters to Opportunities and Future Development. Int J Mol Sci 2024; 25:3727. [PMID: 38612540 PMCID: PMC11012184 DOI: 10.3390/ijms25073727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Revised: 03/22/2024] [Accepted: 03/23/2024] [Indexed: 04/14/2024] Open
Abstract
Carbohydrate-based surfactants are amphiphilic compounds containing hydrophilic moieties linked to hydrophobic aglycones. More specifically, carbohydrate esters are biosourced and biocompatible surfactants derived from inexpensive renewable raw materials (sugars and fatty acids). Their unique properties allow them to be used in various areas, such as the cosmetic, food, and medicine industries. These multi-applications have created a worldwide market for biobased surfactants and consequently expectations for their production. Biobased surfactants can be obtained from various processes, such as chemical synthesis or microorganism culture and surfactant purification. In accordance with the need for more sustainable and greener processes, the synthesis of these molecules by enzymatic pathways is an opportunity. This work presents a state-of-the-art lipase action mode, with a focus on the active sites of these proteins, and then on four essential parameters for optimizing the reaction: type of lipase, reaction medium, temperature, and ratio of substrates. Finally, this review discusses the latest trends and recent developments, showing the unlimited potential for optimization of such enzymatic syntheses.
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Affiliation(s)
| | - Nicolas Joly
- Unité Transformations & Agroressources, ULR7519, Université d’Artois-UniLaSalle, F-62408 Béthune, France; (A.S.); (P.M.)
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2
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Yang T, Pan L, Wu W, Pan X, Xu M, Zhang X, Rao Z. N20D/N116E Combined Mutant Downward Shifted the pH Optimum of Bacillus subtilis NADH Oxidase. BIOLOGY 2023; 12:biology12040522. [PMID: 37106723 PMCID: PMC10135872 DOI: 10.3390/biology12040522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 03/24/2023] [Accepted: 03/27/2023] [Indexed: 04/03/2023]
Abstract
Cofactor regeneration is indispensable to avoid the addition of large quantities of cofactor NADH or NAD+ in oxidation-reduction reactions. Water-forming NADH oxidase (Nox) has attracted substantive attention as it can oxidize cytosolic NADH to NAD+ without concomitant accumulation of by-products. However, its applications have some limitations in some oxidation-reduction processes when its optimum pH is different from its coupled enzymes. In this study, to modify the optimum pH of BsNox, fifteen relevant candidates of site-directed mutations were selected based on surface charge rational design. As predicted, the substitution of this asparagine residue with an aspartic acid residue (N22D) or with a glutamic acid residue (N116E) shifts its pH optimum from 9.0 to 7.0. Subsequently, N20D/N116E combined mutant could not only downshift the pH optimum of BsNox but also significantly increase its specific activity, which was about 2.9-fold at pH 7.0, 2.2-fold at pH 8.0 and 1.2-fold at pH 9.0 that of the wild-type. The double mutant N20D/N116E displays a higher activity within a wide range of pH from 6 to 9, which is wider than the wide type. The usability of the BsNox and its variations for NAD+ regeneration in a neutral environment was demonstrated by coupling with a glutamate dehydrogenase for α-ketoglutaric acid (α-KG) production from L-glutamic acid (L-Glu) at pH 7.0. Employing the variation N20D/N116E as an NAD+ regeneration coenzyme could shorten the process duration; 90% of L-Glu were transformed into α-KG within 40 min vs. 70 min with the wild-type BsNox for NAD+ regeneration. The results obtained in this work suggest the promising properties of the BsNox variation N20D/N116E are competent in NAD+ regeneration applications under a neutral environment.
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3
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Schorn F, Essert A, Zhong Y, Abdullayev S, Castiglione K, Haumann M, Joly NY. Measurement of Minute Liquid Volumes of Chiral Molecules Using In-Fiber Polarimetry. Anal Chem 2023; 95:3204-3209. [PMID: 36720470 PMCID: PMC9933876 DOI: 10.1021/acs.analchem.2c03347] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 11/11/2022] [Indexed: 02/02/2023]
Abstract
We report an optofluidic method that enables to efficiently measure the enantiomeric excess of chiral molecules at low concentrations. The approach is to monitor the optical activity induced by a Kagome-lattice hollow-core photonic crystal fiber filled with a sub-μL volume of chiral compounds. The technique also allows monitoring the enzymatic racemization of R-mandelic acid.
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Affiliation(s)
- Florian Schorn
- Interdisciplinary
Center for Nanostructured Films, Max-Planck-Institute
for the Science of Light, and Friedrich-Alexander-University Erlangen-Nürmberg, Erlangen91058, Germany
| | - Arabella Essert
- Lehrstuhl
für Bioverfahrenstechnik (BVT), Friedrich-Alexander-Universität
Erlangen-Nürnberg (FAU), Erlangen91052, Germany
| | - Yu Zhong
- Lehrstuhl
für Chemische Reaktionstechnik (CRT), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Erlangen91058, Germany
| | - Sahib Abdullayev
- Lehrstuhl
für Chemische Reaktionstechnik (CRT), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Erlangen91058, Germany
| | - Kathrin Castiglione
- Lehrstuhl
für Bioverfahrenstechnik (BVT), Friedrich-Alexander-Universität
Erlangen-Nürnberg (FAU), Erlangen91052, Germany
| | - Marco Haumann
- Lehrstuhl
für Chemische Reaktionstechnik (CRT), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Erlangen91058, Germany
- Research
Centre for Synthesis and Catalysis, Department of Chemistry, University of Johannesburg, P.O. Box 524, Auckland Park2006, South Africa
| | - Nicolas Y. Joly
- Interdisciplinary
Center for Nanostructured Films, Max-Planck-Institute
for the Science of Light, and Friedrich-Alexander-University Erlangen-Nürmberg, Erlangen91058, Germany
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4
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Wen Y, Xu J, Pan D, Wang C. Removal of substrate inhibition of Acinetobacter baumannii xanthine oxidase by point mutation at Gln-201 enables efficient reduction of purine content in fish sauce. Food Chem X 2023; 17:100593. [PMID: 36845495 PMCID: PMC9944496 DOI: 10.1016/j.fochx.2023.100593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 02/02/2023] [Accepted: 02/02/2023] [Indexed: 02/09/2023] Open
Abstract
Xanthine oxidase is an oxidase that has a molybdopterin structure with substrate inhibition. Here, we show that a single point mutation (Q201) in the Acinetobacter baumannii xanthine oxidase (AbXOD) obtained mutant Q201E (k cat =799.44 s-1, no inhibition) with high enzyme activity and decrease of substrate inhibition in 5 mmol/L high substrate model, and which cause two loops structure change at active center, characterized by complete loss of substrate inhibition without reduction of enzymatic activity. Molecular docking results showed that the change of flexible loop increased the affinity between substrate and enzyme, and the formation of a π-π bond and two hydrogen bonds made the substrate more stable in the active center. Ultimately, Q201E can still maintain better enzyme activity under high purine content (an approximately 7-fold improvement over the wild-type), indicating a broader application prospect in the manufacture of low-purine food.
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Affiliation(s)
| | | | | | - Chenghua Wang
- Corresponding author at: College of Light Industry and Food Engineering, 100 Daxue East Road, Nanning 530004, People’s Republic of China.
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5
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Wang MY, Cai SJ, Lin JC, Ji XJ, Zhang ZG. New Anti-Prelog Stereospecific Whole-Cell Biocatalyst for Asymmetric Reduction of Prochiral Ketones. Molecules 2023; 28:molecules28031422. [PMID: 36771091 PMCID: PMC9921870 DOI: 10.3390/molecules28031422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 01/27/2023] [Accepted: 01/30/2023] [Indexed: 02/05/2023] Open
Abstract
The biocatalytic asymmetric reduction of prochiral ketones for the production of enantiopure alcohols is highly desirable due to its inherent advantages over chemical methods. In this study, a new bacterial strain capable of transforming ketones to corresponding alcohols with high activity and excellent enantioselectivity was discovered in a soil sample. The strain was subsequently identified as Bacillus cereus TQ-2 based on its physiological characteristics and 16S rDNA sequence analysis. Under optimized reaction conditions, the resting cells of B. cereus TQ-2 converted acetophenone to enantioenriched (R)-1-phenylethanol with 99% enantiometric excess following anti-Prelog's rule, which is scarce in biocatalytic ketone reduction. The optimum temperature for the cells was 30 °C, and considerable catalytic activity was observed over a broad pH range from 5.0 to 9.0. The cells showed enhanced catalytic activity in the presence of 15% (v/v) glycerol as a co-substrate. The catalytic activity can also be substantially improved by adding Ca2+ or K+ ions. Moreover, the B. cereus TQ-2 cell was highly active in reducing several structurally diverse ketones and aldehydes to form corresponding alcohols with good to excellent conversion. Our study provides a versatile whole-cell biocatalyst that can be used in the asymmetric reduction of ketones for the production of chiral alcohol, thereby expanding the biocatalytic toolbox for potential practical applications.
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Affiliation(s)
- Min-Yu Wang
- School of Pharmaceutical Sciences, Nanjing Tech University, Nanjing 211800, China
| | - Shun-Ju Cai
- School of Pharmaceutical Sciences, Nanjing Tech University, Nanjing 211800, China
| | - Jia-Chun Lin
- School of Pharmaceutical Sciences, Nanjing Tech University, Nanjing 211800, China
| | - Xiao-Jun Ji
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, China
| | - Zhi-Gang Zhang
- School of Pharmaceutical Sciences, Nanjing Tech University, Nanjing 211800, China
- Correspondence:
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6
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Immobilization of Lathyrus cicera Amine Oxidase on Magnetic Microparticles for Biocatalytic Applications. Int J Mol Sci 2022; 23:ijms23126529. [PMID: 35742969 PMCID: PMC9223840 DOI: 10.3390/ijms23126529] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 06/08/2022] [Accepted: 06/09/2022] [Indexed: 12/19/2022] Open
Abstract
Amine oxidases are enzymes belonging to the class of oxidoreductases that are widespread, from bacteria to humans. The amine oxidase from Lathyrus cicera has recently appeared in the landscape of biocatalysis, showing good potential in the green synthesis of aldehydes. This enzyme catalyzes the oxidative deamination of a wide range of primary amines into the corresponding aldehydes but its use as a biocatalyst is challenging due to the possible inactivation that might occur at high product concentrations. Here, we show that the enzyme’s performance can be greatly improved by immobilization on solid supports. The best results are achieved using amino-functionalized magnetic microparticles: the immobilized enzyme retains its activity, greatly improves its thermostability (4 h at 75 °C), and can be recycled up to 8 times with a set of aromatic ethylamines. After the last reaction cycle, the overall conversion is about 90% for all tested substrates, with an aldehyde production ranging between 100 and 270 mg depending on the substrate used. As a proof concept, one of the aldehydes thus produced was successfully used for the biomimetic synthesis of a non-natural benzylisoquinoline alkaloid.
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7
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Du HJ, Luo W, Appiah B, Zou ZC, Yang ZH, Zeng R, Luo L. Promotion of the Asymmetric Reduction of Prochiral Ketone with Recombinant E. coli Through Strengthening Intracellular NADPH Supply by Modifying EMP and Introducing NAD Kinase. Catal Letters 2021. [DOI: 10.1007/s10562-020-03490-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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8
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Demmel GI, Bordón DL, Vázquez AM, Decarlini MF, Díaz Panero M, Rossi LI, Aimar ML. Whole seeds of Bauhinia variegata L. (Fabaceae) as an efficient biocatalyst for benzyl alcohol preparations from benzaldehydes. BIOCATAL BIOTRANSFOR 2021. [DOI: 10.1080/10242422.2021.1956910] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Gabriel I. Demmel
- Facultad de Ciencias Químicas, Cátedra de Tecnología Química, Universidad Católica de Córdoba, Córdoba, Argentina
| | - Daniela L. Bordón
- Facultad de Ciencias Exactas, Físicas y Naturales, Cátedra de Química Aplicada, Universidad Nacional de Córdoba, Córdoba, Argentina
| | - Ana M. Vázquez
- Facultad de Ciencias Químicas, Cátedra de Tecnología Química, Universidad Católica de Córdoba, Córdoba, Argentina
| | - María F. Decarlini
- Facultad de Ciencias Químicas, Cátedra de Tecnología Química, Universidad Católica de Córdoba, Córdoba, Argentina
| | - Mariángeles Díaz Panero
- Facultad de Ciencias Químicas, Cátedra de Tecnología Química, Universidad Católica de Córdoba, Córdoba, Argentina
| | - Laura I. Rossi
- Facultad de Ciencias Químicas, Departamento de Química Orgánica, Universidad Nacional de Córdoba, Córdoba, Argentina
- Instituto de Investigaciones en Físico-Química de Córdoba (INFIQC-CONICET), Córdoba, Argentina
| | - Mario L. Aimar
- Facultad de Ciencias Exactas, Físicas y Naturales, Cátedra de Química Aplicada, Universidad Nacional de Córdoba, Córdoba, Argentina
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9
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Nikulin M, Švedas V. Prospects of Using Biocatalysis for the Synthesis and Modification of Polymers. Molecules 2021; 26:2750. [PMID: 34067052 PMCID: PMC8124709 DOI: 10.3390/molecules26092750] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2021] [Revised: 04/30/2021] [Accepted: 05/04/2021] [Indexed: 11/16/2022] Open
Abstract
Trends in the dynamically developing application of biocatalysis for the synthesis and modification of polymers over the past 5 years are considered, with an emphasis on the production of biodegradable, biocompatible and functional polymeric materials oriented to medical applications. The possibilities of using enzymes not only as catalysts for polymerization but also for the preparation of monomers for polymerization or oligomers for block copolymerization are considered. Special attention is paid to the prospects and existing limitations of biocatalytic production of new synthetic biopolymers based on natural compounds and monomers from biomass, which can lead to a huge variety of functional biomaterials. The existing experience and perspectives for the integration of bio- and chemocatalysis in this area are discussed.
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Affiliation(s)
- Maksim Nikulin
- Belozersky Institute of Physicochemical Biology, Lomonosov Moscow State University, Lenin Hills 1, bldg. 40, 119991 Moscow, Russia;
| | - Vytas Švedas
- Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Lenin Hills 1, bldg. 73, 119991 Moscow, Russia
- Research Computing Center, Lomonosov Moscow State University, Lenin Hills 1, bldg. 4, 119991 Moscow, Russia
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10
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Li Y, Ma Y, Li P, Zhang X, Ribitsch D, Alcalde M, Hollmann F, Wang Y. Enantioselective Sulfoxidation of Thioanisole by Cascading a Choline Oxidase and a Peroxygenase in the Presence of Natural Deep Eutectic Solvents. Chempluschem 2021; 85:254-257. [PMID: 31951316 DOI: 10.1002/cplu.201900751] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 01/17/2020] [Indexed: 01/31/2023]
Abstract
A bienzymatic cascade for selective sulfoxidation is presented. The evolved recombinant peroxygenase from Agrocybe aegeritra catalyses the enantioselective sulfoxidation of thioanisole whereas the choline oxidase from Arthrobacter nicotianae provides the H2 O2 necessary via reductive activation of ambient oxygen. The reactions are performed in choline chloride-based deep eutectic solvents serving as co-solvent and stoichiometric reductant at the same time. Very promising product concentrations (up to 15 mM enantiopure sulfoxide) and catalyst performances (turnover numbers of 150,000 and 2100 for the peroxygenase and oxidase, respectively) have been achieved.
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Affiliation(s)
- Yongru Li
- School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| | - Yunjian Ma
- School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| | - Peilin Li
- School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| | - Xizhen Zhang
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
| | - Doris Ribitsch
- Austrian Centre for Industrial Biotechnology (ACIB), Konrad Lorenz Straße 22, 3430, Tulln, Austria
| | - Miguel Alcalde
- Department of Biocatalysis, Institute of Catalysis, CSIC, 28049, Madrid, Spain
| | - Frank Hollmann
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629HZ, Delft (The, Netherlands
| | - Yonghua Wang
- School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640, P. R. China
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11
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Ring-Opening of Epoxides with Amines for Synthesis of β-Amino Alcohols in a Continuous-Flow Biocatalysis System. Catalysts 2020. [DOI: 10.3390/catal10121419] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
An efficient method for the preparation of β-amino alcohols catalyzed by lipase TL IM from Thermomyces lanuginosus in a continuous-flow reactor was developed. The eco-friendly biocatalyst combined with continuous-flow reaction technology displayed high efficiency in the synthesis of β-amino alcohols. The benign reaction conditions (35 °C) and short residence time (20 min), together with the use of low cost and readily available starting materials, make this synthetic approach a promising alternative to current β-amino alcohol synthesis.
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12
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Sheng X, Kazemi M, Planas F, Himo F. Modeling Enzymatic Enantioselectivity using Quantum Chemical Methodology. ACS Catal 2020. [DOI: 10.1021/acscatal.0c00983] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Xiang Sheng
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, Stockholm SE-106 91, Sweden
| | - Masoud Kazemi
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, Stockholm SE-106 91, Sweden
| | - Ferran Planas
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, Stockholm SE-106 91, Sweden
| | - Fahmi Himo
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, Stockholm SE-106 91, Sweden
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13
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Continuous-Flow Synthesis of β-Amino Acid Esters by Lipase-Catalyzed Michael Addition of Aromatic Amines. Catalysts 2020. [DOI: 10.3390/catal10040432] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
A continuous-flow procedure for the synthesis of β-amino acid esters has been developed via lipase-catalyzed Michael reaction of various aromatic amines with acrylates. Lipase TL IM from Thermomyces lanuginosus was first used to catalyze Michael addition reaction of aromatic amines. Compared with other methods, the salient features of this work include green reaction conditions (methanol as reaction medium), short residence time (30 min), readily available catalyst and a reaction process that is easy to control. This enzymatic synthesis of β-amino acid esters performed in continuous-flow microreactors is an innovation that provides a new strategy for the fast biotransformation of β-amino acid esters.
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14
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Rao J, Zhang R, Xu G, Li L, Xu Y. Efficient production of (S)-1-phenyl-1,2-ethanediol using xylan as co-substrate by a coupled multi-enzyme Escherichia coli system. Microb Cell Fact 2020; 19:87. [PMID: 32264866 PMCID: PMC7137420 DOI: 10.1186/s12934-020-01344-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Accepted: 03/28/2020] [Indexed: 12/04/2022] Open
Abstract
Background (S)-1-phenyl-1,2-ethanediol is an important chiral intermediate in the synthesis of liquid crystals and chiral biphosphines. (S)-carbonyl reductase II from Candida parapsilosis catalyzes the conversion of 2-hydroxyacetophenone to (S)-1-phenyl-1,2-ethanediol with NADPH as a cofactor. Glucose dehydrogenase with a Ala258Phe mutation is able to catalyze the oxidation of xylose with concomitant reduction of NADP+ to NADPH, while endo-β-1,4-xylanase 2 catalyzes the conversion of xylan to xylose. In the present work, the Ala258Phe glucose dehydrogenase mutant and endo-β-1,4-xylanase 2 were introduced into the (S)-carbonyl reductase II-mediated chiral pathway to strengthen cofactor regeneration by using xylan as a naturally abundant co-substrate. Results We constructed several coupled multi-enzyme systems by introducing (S)-carbonyl reductase II, the A258F glucose dehydrogenase mutant and endo-β-1,4-xylanase 2 into Escherichia coli. Different strains were produced by altering the location of the encoding genes on the plasmid. Only recombinant E. coli/pET-G-S-2 expressed all three enzymes, and this strain produced (S)-1-phenyl-1,2-ethanediol from 2-hydroxyacetophenone as a substrate and xylan as a co-substrate. The optical purity was 100% and the yield was 98.3% (6 g/L 2-HAP) under optimal conditions of 35 °C, pH 6.5 and a 2:1 substrate-co-substrate ratio. The introduction of A258F glucose dehydrogenase and endo-β-1,4-xylanase 2 into the (S)-carbonyl reductase II-mediated chiral pathway caused a 54.6% increase in yield, and simultaneously reduced the reaction time from 48 to 28 h. Conclusions This study demonstrates efficient chiral synthesis using a pentose as a co-substrate to enhance cofactor regeneration. This provides a new approach for enantiomeric catalysis through the inclusion of naturally abundant materials.
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Affiliation(s)
- Junchao Rao
- Key Laboratory of Industrial Biotechnology of Ministry of Education & School of Biotechnology, Jiangnan University, Wuxi, 214122, People's Republic of China
| | - Rongzhen Zhang
- Key Laboratory of Industrial Biotechnology of Ministry of Education & School of Biotechnology, Jiangnan University, Wuxi, 214122, People's Republic of China. .,School of Biotechnology, Jiangnan University, 1800 Lihu Avenue, Wuxi, 214122, China.
| | - Guanyu Xu
- Xuteli School, Beijing Institute of Technology, Beijing, 100081, People's Republic of China
| | - Lihong Li
- Key Laboratory of Industrial Biotechnology of Ministry of Education & School of Biotechnology, Jiangnan University, Wuxi, 214122, People's Republic of China
| | - Yan Xu
- Key Laboratory of Industrial Biotechnology of Ministry of Education & School of Biotechnology, Jiangnan University, Wuxi, 214122, People's Republic of China
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15
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Shang YP, Chen Q, Li AT, Quan S, Xu JH, Yu HL. Attenuated substrate inhibition of a haloketone reductase via structure-guided loop engineering. J Biotechnol 2020; 308:141-147. [PMID: 31866427 DOI: 10.1016/j.jbiotec.2019.12.011] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Revised: 11/26/2019] [Accepted: 12/18/2019] [Indexed: 11/25/2022]
Abstract
Substrate inhibition of enzymes is one of the main obstacles encountered frequently in industrial biocatalysis. Haloketone reductase SsCR was seriously inhibited by substrate 2,2',4'-trichloroacetophenone. In this study, two essential loops were found that have a relationship with substrate binding by conducting X-ray crystal structure analysis. Three key residues were selected from the tips of the loops and substituted with amino acids with lower hydrophobicity to weaken the hydrophobic interactions that bridge the two loops, resulting in a remarkable reduction of substrate inhibition. Among these variants, L211H showed a significant attenuation of substrate inhibition, with a Ki of 16 mM, which was 16 times that of the native enzyme. The kinetic parameter kcat/Km of L211H was 3.1 × 103 s-1 mM-1, showing the comparable catalytic efficiency to that of the wild-type enzyme (WT). At the substrate loading of 100 mM, the space time yield of variant L211H in asymmetric reduction of the haloketone was 3-fold higher than that of the WT.
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Affiliation(s)
- Yue-Peng Shang
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, Shanghai, 200237, China
| | - Qi Chen
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, Shanghai, 200237, China.
| | - Ai-Tao Li
- Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Hubei Key Laboratory of Industrial Biotechnology, College of Life Sciences, Hubei University, 368 Youyi Road, Wuchang, Wuhan, 430062, China
| | - Shu Quan
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, Shanghai, 200237, China
| | - Jian-He Xu
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, Shanghai, 200237, China
| | - Hui-Lei Yu
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, Shanghai, 200237, China.
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16
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Gavin DP, Reen FJ, Rocha-Martin J, Abreu-Castilla I, Woods DF, Foley AM, Sánchez-Murcia PA, Schwarz M, O'Neill P, Maguire AR, O'Gara F. Genome mining and characterisation of a novel transaminase with remote stereoselectivity. Sci Rep 2019; 9:20285. [PMID: 31889089 PMCID: PMC6937235 DOI: 10.1038/s41598-019-56612-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Accepted: 11/20/2019] [Indexed: 01/27/2023] Open
Abstract
Microbial enzymes from pristine niches can potentially deliver disruptive opportunities in synthetic routes to Active Pharmaceutical Ingredients and intermediates in the Pharmaceutical Industry. Advances in green chemistry technologies and the importance of stereochemical control, further underscores the application of enzyme-based solutions in chemical synthesis. The rich tapestry of microbial diversity in the oceanic ecosystem encodes a capacity for novel biotransformations arising from the chemical complexity of this largely unexplored bioactive reservoir. Here we report a novel ω-transaminase discovered in a marine sponge Pseudovibrio sp. isolate. Remote stereoselection using a transaminase has been demonstrated for the first time using this novel protein. Application to the resolution of an intermediate in the synthesis of sertraline highlights the synthetic potential of this novel biocatalyst discovered through genomic mining. Integrated chemico-genomics revealed a unique substrate profile, while molecular modelling provided structural insights into this ‘first in class’ selectivity at a remote chiral centre.
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Affiliation(s)
- D P Gavin
- School of Chemistry; Analytical and Biological Chemistry Research Facility, University College Cork, Cork, Ireland.,Synthesis and Solid State Pharmaceutical Centre, University College Cork, Cork, Ireland
| | - F J Reen
- BIOMERIT Research Centre, School of Microbiology, University College Cork, Cork, Ireland.,School of Microbiology, University College Cork, T12 K8AF, Cork, Ireland
| | - J Rocha-Martin
- BIOMERIT Research Centre, School of Microbiology, University College Cork, Cork, Ireland
| | - I Abreu-Castilla
- BIOMERIT Research Centre, School of Microbiology, University College Cork, Cork, Ireland
| | - D F Woods
- BIOMERIT Research Centre, School of Microbiology, University College Cork, Cork, Ireland
| | - A M Foley
- School of Chemistry, School of Pharmacy, Analytical and Biological Chemistry Research Facility, University College Cork, Cork, Ireland
| | - P A Sánchez-Murcia
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 17, A-1090, Vienna, Austria
| | - M Schwarz
- School of Chemistry; Analytical and Biological Chemistry Research Facility, University College Cork, Cork, Ireland
| | - P O'Neill
- Pfizer Process Development Centre, Loughbeg, Cork, Ireland
| | - A R Maguire
- Synthesis and Solid State Pharmaceutical Centre, University College Cork, Cork, Ireland. .,School of Chemistry, School of Pharmacy, Analytical and Biological Chemistry Research Facility, University College Cork, Cork, Ireland.
| | - F O'Gara
- Synthesis and Solid State Pharmaceutical Centre, University College Cork, Cork, Ireland. .,BIOMERIT Research Centre, School of Microbiology, University College Cork, Cork, Ireland. .,Human Microbiome Programme, School of Pharmacy and Biomedical Sciences, Curtin Health Innovation Research Institute, Curtin University, Perth, WA 6102, Australia and Telethon Kids Institute, Perth, WA, 6008, Australia.
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17
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Musa MM, Hollmann F, Mutti FG. Synthesis of enantiomerically pure alcohols and amines via biocatalytic deracemisation methods. Catal Sci Technol 2019; 9:5487-5503. [PMID: 33628427 PMCID: PMC7116805 DOI: 10.1039/c9cy01539f] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Deracemisation via chemo-enzymatic or multi-enzymatic approaches is the optimum substitute for kinetic resolution, which suffers from the limitation of a theoretical maximum 50% yield albeit high enantiomeric excess is attainable. This review covers the recent progress in various deracemisation approaches applied to the synthesis of enantiomerically pure alcohols and amines, such as (1) dynamic kinetic resolution, (2) cyclic deracemisation, (3) linear deracemisation (including stereoinversion) and (4) enantioconvergent methods.
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Affiliation(s)
- Musa M Musa
- Department of Chemistry, King Fahd University of Petroleum and Minerals, Dhahran 31261, Kingdom of Saudi Arabia
| | - Frank Hollmann
- Department of Biotechnology, Delft University of Technology, van der Maasweg 9, 2629HZDelft, The Netherlands
| | - Francesco G Mutti
- Van't HoffInstitute for Molecular Sciences, HIMS-Biocat, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands
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18
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Yadav P, Khare SK, Sharma S. Kinetics of epoxidation by a
Musa paradisiaca
chloroperoxidase. INT J CHEM KINET 2019. [DOI: 10.1002/kin.21280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Pratibha Yadav
- Centre for Rural Development and TechnologyIndian Institute of Technology Delhi New Delhi India
| | - Sunil K. Khare
- Department of ChemistryIndian Institute of Technology Delhi New Delhi India
| | - Satyawati Sharma
- Centre for Rural Development and TechnologyIndian Institute of Technology Delhi New Delhi India
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19
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Wang X, An Z. Enzyme-initiated reversible addition-fragmentation chain transfer (RAFT) polymerization: Precision polymer synthesis via enzymatic catalysis. Methods Enzymol 2019; 627:291-319. [PMID: 31630745 DOI: 10.1016/bs.mie.2019.05.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Enzyme-initiated reversible addition-fragmentation chain transfer (RAFT) polymerization provides a sustainable strategy for efficient production of well-defined polymers under mild conditions. Horseradish peroxidase (HRP), a heme-containing metalloenzyme, catalyzes oxidation of acetylacetone (ACAC) by hydrogen peroxide (H2O2) to generate ACAC radicals, initiating polymerization of vinyl monomers. This HRP/H2O2/ACAC ternary initiating system is applied to RAFT polymerization of different types of vinyl monomers. Furthermore, to overcome the inherent limitation of necessity for oxygen-free conditions, another enzyme, glucose oxidase (GOx) or pyranose 2-oxidase (P2Ox), with excellent deoxygenation capability, is introduced to consume oxygen by catalyzing oxidation of glucose to generate H2O2. The generated H2O2 is directly supplied to HRP catalysis for radical generation. Both GOx-HRP and P2Ox-HRP cascade catalysis afford RAFT polymerization with oxygen tolerance. In this chapter, we mainly focus on detailed synthetic protocols of RAFT polymerizations initiated by HRP/H2O2/ACAC ternary initiating system and P2Ox-HRP cascade catalysis. The general characterization and analytical methods used in these enzyme-initiated RAFT polymerizations are also included.
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Affiliation(s)
- Xiao Wang
- Institute of Nanochemistry and Nanobiology, College of Environmental and Chemical Engineering, Shanghai University, Shanghai, China
| | - Zesheng An
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, China.
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20
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van der Helm MP, Bracco P, Busch H, Szymańska K, Jarzębski AB, Hanefeld U. Hydroxynitrile lyases covalently immobilized in continuous flow microreactors. Catal Sci Technol 2019. [DOI: 10.1039/c8cy02192a] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Enzymes are supreme catalysts when it comes to high enantiopurities and their immobilization will pave the way for continuous operation.
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Affiliation(s)
| | - Paula Bracco
- Biokatalyse
- Afdeling Biotechnologie
- Technische Universiteit Delft
- 2629HZ Delft
- The Netherlands
| | - Hanna Busch
- Biokatalyse
- Afdeling Biotechnologie
- Technische Universiteit Delft
- 2629HZ Delft
- The Netherlands
| | - Katarzyna Szymańska
- Department of Chemical Engineering and Process Design
- Silesian University of Technology
- 44-100 Gliwice
- Poland
| | - Andrzej B. Jarzębski
- Department of Chemical Engineering and Process Design
- Silesian University of Technology
- 44-100 Gliwice
- Poland
- Institute of Chemical Engineering
| | - Ulf Hanefeld
- Biokatalyse
- Afdeling Biotechnologie
- Technische Universiteit Delft
- 2629HZ Delft
- The Netherlands
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21
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Yao P, Xu Z, Yu S, Wu Q, Zhu D. Imine Reductase‐Catalyzed Enantioselective Reduction of Bulky α,β‐Unsaturated Imines en Route to a Pharmaceutically Important Morphinan Skeleton. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201801326] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Peiyuan Yao
- University of Chinese Academy of Sciences 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes, Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China
- Guangdong Provincial Key Laboratory of Fermentation and Enzyme EngineeringSouth China University of Technology Guangzhou 510006 People's Republic of China
| | - Zefei Xu
- University of Chinese Academy of Sciences 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes, Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China
| | - Shanshan Yu
- National Engineering Laboratory for Industrial Enzymes, Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China
| | - Qiaqing Wu
- University of Chinese Academy of Sciences 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes, Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China
| | - Dunming Zhu
- University of Chinese Academy of Sciences 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes, Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China
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22
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Zhang M, Yao P, Yu S, Zhang T, Wu Q, Zhu D. Efficient selective hydrolysis of terephthalonitrile to 4-cyanobenzoic acid catalyzed by a novel nitrilase from Pantoea sp. Process Biochem 2018. [DOI: 10.1016/j.procbio.2018.09.020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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23
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Coccia F, Tonucci L, Del Boccio P, Caporali S, Hollmann F, d'Alessandro N. Stereoselective Double Reduction of 3-Methyl-2-cyclohexenone, by Use of Palladium and Platinum Nanoparticles, in Tandem with Alcohol Dehydrogenase. NANOMATERIALS (BASEL, SWITZERLAND) 2018; 8:E853. [PMID: 30347698 PMCID: PMC6215098 DOI: 10.3390/nano8100853] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Revised: 10/12/2018] [Accepted: 10/17/2018] [Indexed: 11/25/2022]
Abstract
The combination of metal nanoparticles (Pd or Pt NPs) with NAD-dependent thermostable alcohol dehydrogenase (TADH) resulted in the one-flask catalytic double reduction of 3-methyl-2-cyclohexenone to 3-(1S,3S)-methylcyclohexanol. In this article, some assumptions about the interactions between a chemocatalyst and a biocatalyst have been proposed. It was demonstrated that the size of the NPs was the critical parameter for the mutual inhibition: the bigger the NPs, the more harmful for the enzyme they were, even if the NPs themselves were only moderately inactivated. Conversely, the smaller the NPs, the more minimal the TADH denaturation, although they were dramatically inhibited. Resuming, the chemocatalysts were very sensitive to deactivation, which was not related to the amount of enzyme used, while the inhibition of the biocatalyst can be strongly reduced by minimizing the NPs/TADH ratio used to catalyze the reaction. Among some methods to avoid direct binding of NPs with TADH, we found that using large Pd NPs and protecting their surfaces with a silica shell, the overall yield of 3-(1S,3S)-methylcyclohexanol was maximized (36%).
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Affiliation(s)
- Francesca Coccia
- Department of Engineering and Geology (INGEO), G. d'Annunzio University of Chieti-Pescara, Viale Pindaro 42, I-66100 Chieti Scalo, Italy.
- Department of Biotechnology, Delft University of Technology, van der Maasweg 9, 2629HZ Delft, The Netherlands.
| | - Lucia Tonucci
- Department of Philosophical, Educational and Economic Sciences, G. d'Annunzio University of Chieti-Pescara, Via dei Vestini 31, I-66100 Chieti Scalo, Italy.
| | - Piero Del Boccio
- Department of Pharmacy, G. d'Annunzio University of Chieti-Pescara, Via dei Vestini 31, I-66100 Chieti Scalo, Italy.
| | - Stefano Caporali
- Department of Chemistry, University of Firenze, Via della Lastruccia 3-13, I-50019 Sesto Fiorentino, Italy.
| | - Frank Hollmann
- Department of Biotechnology, Delft University of Technology, van der Maasweg 9, 2629HZ Delft, The Netherlands.
| | - Nicola d'Alessandro
- Department of Engineering and Geology (INGEO), G. d'Annunzio University of Chieti-Pescara, Viale Pindaro 42, I-66100 Chieti Scalo, Italy.
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24
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Development of Biotransamination Reactions towards the 3,4-Dihydro-2H-1,5-benzoxathiepin-3-amine Enantiomers. Catalysts 2018. [DOI: 10.3390/catal8100470] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
The stereoselective synthesis of chiral amines is an appealing task nowadays. In this context, biocatalysis plays a crucial role due to the straightforward conversion of prochiral and racemic ketones into enantiopure amines by means of a series of enzyme classes such as amine dehydrogenases, imine reductases, reductive aminases and amine transaminases. In particular, the stereoselective synthesis of 1,5-benzoxathiepin-3-amines have attracted particular attention since they possess remarkable biological profiles; however, their access through biocatalytic methods is unexplored. Amine transaminases are applied herein in the biotransamination of 3,4-dihydro-2H-1,5-benzoxathiepin-3-one, finding suitable enzymes for accessing both target amine enantiomers in high conversion and enantiomeric excess values. Biotransamination experiments have been analysed, trying to optimise the reaction conditions in terms of enzyme loading, temperature and reaction times.
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25
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Hen Egg White Lysozyme Catalyzed Efficient Synthesis of 3-Indolyl-3-hydroxy Oxindole in Aqueous Ethanol. Catal Letters 2018. [DOI: 10.1007/s10562-018-2551-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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26
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Zhang Y, Yao P, Cui Y, Wu Q, Zhu D. One‐Pot Enzymatic Synthesis of Cyclic Vicinal Diols from Aliphatic Dialdehydes via Intramolecular C−C Bond Formation and Carbonyl Reduction Using Pyruvate Decarboxylases and Alcohol Dehydrogenases. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201800455] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Yan Zhang
- University of Chinese Academy of Sciences, 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences, 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China Fax: (+86) 22-24828703
| | - Peiyuan Yao
- University of Chinese Academy of Sciences, 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences, 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China Fax: (+86) 22-24828703
| | - Yunfeng Cui
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences, 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China Fax: (+86) 22-24828703
| | - Qiaqing Wu
- University of Chinese Academy of Sciences, 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences, 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China Fax: (+86) 22-24828703
| | - Dunming Zhu
- University of Chinese Academy of Sciences, 19(A) Yuquan Road, Shijingshan District Beijing 100049 People's Republic of China
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial BiotechnologyChinese Academy of Sciences, 32 Xi Qi Dao, Tianjin Airport Economic Area Tianjin 300308 People's Republic of China Fax: (+86) 22-24828703
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27
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Affiliation(s)
- Yujie Liang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Jialiang Wei
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Xu Qiu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
| | - Ning Jiao
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road 38, Beijing 100191, China
- State Key Laboratory of Organometallic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
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28
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Stereoselective Enzymatic Reduction of 1,4-Diaryl-1,4-Diones to the Corresponding Diols Employing Alcohol Dehydrogenases. Catalysts 2018. [DOI: 10.3390/catal8040150] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
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29
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Liu H, Chen BS, de Souza FZR, Liu L. A Comparative Study on Asymmetric Reduction of Ketones Using the Growing and Resting Cells of Marine-Derived Fungi. Mar Drugs 2018; 16:E62. [PMID: 29443943 PMCID: PMC5852490 DOI: 10.3390/md16020062] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Revised: 02/01/2018] [Accepted: 02/03/2018] [Indexed: 01/14/2023] Open
Abstract
Whole-cell biocatalysts offer a highly enantioselective, minimally polluting route to optically active alcohols. Currently, most of the whole-cell catalytic performance involves resting cells rather than growing cell biotransformation, which is one-step process that benefits from the simultaneous growth and biotransformation, eliminating the need for catalysts preparation. In this paper, asymmetric reduction of 14 aromatic ketones to the corresponding enantiomerically pure alcohols was successfully conducted using the growing and resting cells of marine-derived fungi under optimized conditions. Good yields and excellent enantioselectivities were achieved with both methods. Although substrate inhibition might be a limiting factor for growing cell biotransformation, the selected strain can still completely convert 10-mM substrates into the desired products. The resting cell biotransformation showed a capacity to be recycled nine times without a significant decrease in the activity. This is the first study to perform asymmetric reduction of ketones by one-step growing cell biotransformation.
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Affiliation(s)
- Hui Liu
- School of Marine Sciences, Sun Yat-Sen University, Guangzhou 510275, China.
| | - Bi-Shuang Chen
- School of Marine Sciences, Sun Yat-Sen University, Guangzhou 510275, China.
- Guangdong Provincial Key Laboratory of Marine Resources and Coastal Engineering, Guangzhou 510275, China.
- South China Sea Bio-Resource Exploitation and Utilization Collaborative Innovation Center, Sun Yat-Sen University, Guangzhou 510275, China.
| | | | - Lan Liu
- School of Marine Sciences, Sun Yat-Sen University, Guangzhou 510275, China.
- Guangdong Provincial Key Laboratory of Marine Resources and Coastal Engineering, Guangzhou 510275, China.
- South China Sea Bio-Resource Exploitation and Utilization Collaborative Innovation Center, Sun Yat-Sen University, Guangzhou 510275, China.
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30
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Alcántara AR, García-Junceda E, Gotor V, Plou FJ. Biocatalysis in Spain: A field of success and innovation. BIOCATAL BIOTRANSFOR 2017. [DOI: 10.1080/10242422.2017.1420064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Andrés R. Alcántara
- Departamento de Química en Ciencias Farmacéuticas (QUICIFARM), Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain
| | - Eduardo García-Junceda
- Departamento de Química Bioorgánica, Instituto de Química Orgánica General, CSIC, Madrid, Spain
| | - Vicente Gotor
- Departamento de Química Orgánica e Inorgánica, Facultad de Química, Universidad de Oviedo, Oviedo, Spain
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31
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The use of marine-derived fungi for preparation of enantiomerically pure alcohols. Appl Microbiol Biotechnol 2017; 102:1317-1330. [DOI: 10.1007/s00253-017-8707-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2017] [Revised: 11/27/2017] [Accepted: 12/11/2017] [Indexed: 10/18/2022]
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32
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Enzymatic conversion of CO 2 to CH 3 OH via reverse dehydrogenase cascade biocatalysis: Quantitative comparison of efficiencies of immobilized enzyme systems. Biochem Eng J 2017. [DOI: 10.1016/j.bej.2017.08.011] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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33
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Ranjan P, Pandey A, Binod P. Resolution of enantiopure (S)-1-(1-napthyl) ethanol from racemic mixture by a novel Bacillus cereus isolate. J Basic Microbiol 2017; 57:762-769. [PMID: 28671310 DOI: 10.1002/jobm.201700207] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2017] [Revised: 05/29/2017] [Accepted: 06/06/2017] [Indexed: 11/11/2022]
Abstract
Chiral intermediates have wide application and high demand in pharmaceutical, agricultural, and other biotechnological industries for the preparation of bulk drug substances or fine chemicals. (S)-1-(1-napthyl) ethanol is an important synthetic intermediate of mevinic acid analog and a potential inhibitor of 3-hydroxy methyl glutaryl coenzyme A reductase enzymes which is rate limiting for cholesterol synthesis. The present study focuses on the resolution of (RS)-1-(1-napthyl) ethanol using whole cell biotransformation approach. The screening of microbial strains for the specific conversion were performed by the enrichment techniques using (RS)-1-(1-napthyl) ethanol. Evaluation of resolution, i.e., the enantioselective conversion of (R)-1-(1-napthyl) ethanol into 1-acetonapthone and production of (S)-1-(1-napthyl) ethanol with high purity were carried out. Among the isolates, a novel strain Bacillus cereus WG3 was found to be potent for the resolution and conversion of (S)-1-(1-napthyl) ethanol. This strain showed 86% conversion of (R)-1-(1-napthyl) ethanol and 95% yield of S-1-(1-napthyl) ethanol with 80% ee after 24 h. Further, the optimization of biotransformation reactions was carried out and the optimal parameters were found to be pH 7.0 and temperature 30 °C.
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Affiliation(s)
- Preeti Ranjan
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science & Technology, Thiruvananthapuram, Kerala, India
| | - Ashok Pandey
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science & Technology, Thiruvananthapuram, Kerala, India.,Center of Innovative & Applied Bioprocessing, Mohali, Punjab, India
| | - Parameswaran Binod
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science & Technology, Thiruvananthapuram, Kerala, India
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34
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Abstract
Whole-cell biocatalysts provide unique advantages and have been widely used for the efficient biosynthesis of value-added fine and bulk chemicals, as well as pharmaceutically active ingredients. What is more, advances in synthetic biology and metabolic engineering, together with the rapid development of molecular genetic tools, have brought about a renaissance of whole-cell biocatalysis. These rapid advancements mean that whole-cell biocatalysts can increasingly be rationally designed. Genes of heterologous enzymes or synthetic pathways are increasingly being introduced into microbial hosts, and depending on the complexity of the synthetic pathway or the target products, they can enable the production of value-added chemicals from cheap feedstock. Metabolic engineering and synthetic biology efforts aimed at optimizing the existing microbial cell factories concentrate on improving heterologous pathway flux, precursor supply, and cofactor balance, as well as other aspects of cellular metabolism, to enhance the efficiency of biocatalysts. In the present review, we take a critical look at recent developments in whole-cell biocatalysis, with an emphasis on strategies applied to designing and optimizing the organisms that are increasingly modified for efficient production of chemicals.
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Affiliation(s)
- Baixue Lin
- CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, People's Republic of China.
| | - Yong Tao
- CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, People's Republic of China.
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35
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Burns M, Martinez CA, Vanderplas B, Wisdom R, Yu S, Singer RA. A Chemoenzymatic Route to Chiral Intermediates Used in the Multikilogram Synthesis of a Gamma Secretase Inhibitor. Org Process Res Dev 2017. [DOI: 10.1021/acs.oprd.7b00096] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Michael Burns
- Chemical
Research and Development, Pfizer Inc., Eastern Point Road, Groton, Connecticut 06340, United States
| | - Carlos A. Martinez
- Chemical
Research and Development, Pfizer Inc., Eastern Point Road, Groton, Connecticut 06340, United States
| | - Brian Vanderplas
- Chemical
Research and Development, Pfizer Inc., Eastern Point Road, Groton, Connecticut 06340, United States
| | - Richard Wisdom
- Euticals GmbH, Industriepark Hoechst,
D569, 65926, Frankfurt, Germany
| | - Shu Yu
- Chemical
Research and Development, Pfizer Inc., Eastern Point Road, Groton, Connecticut 06340, United States
| | - Robert A. Singer
- Chemical
Research and Development, Pfizer Inc., Eastern Point Road, Groton, Connecticut 06340, United States
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36
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Nett N, Duewel S, Richter AA, Hoebenreich S. Revealing Additional Stereocomplementary Pairs of Old Yellow Enzymes by Rational Transfer of Engineered Residues. Chembiochem 2017; 18:685-691. [PMID: 28107586 DOI: 10.1002/cbic.201600688] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Indexed: 01/01/2023]
Abstract
Every year numerous protein engineering and directed evolution studies are published, increasing the knowledge that could be used by protein engineers. Here we test a protein engineering strategy that allows quick access to improved biocatalysts with very little screening effort. Conceptually it is assumed that engineered residues previously identified by rational and random methods induce similar improvements when transferred to family members. In an application to ene-reductases from the Old Yellow Enzyme (OYE) family, the newly created variants were tested with three compounds, revealing more stereocomplementary OYE pairs with potent turnover frequencies (up to 660 h-1 ) and excellent stereoselectivities (up to >99 %). Although systematic prediction of absolute enantioselectivity of OYE variants remains a challenge, "scaffold sampling" was confirmed as a promising addition to protein engineers' collection of strategies.
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Affiliation(s)
- Nathalie Nett
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
| | - Sabine Duewel
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
| | - Alexandra Annelis Richter
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
| | - Sabrina Hoebenreich
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
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37
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Börner T, Rämisch S, Reddem ER, Bartsch S, Vogel A, Thunnissen AMWH, Adlercreutz P, Grey C. Explaining Operational Instability of Amine Transaminases: Substrate-Induced Inactivation Mechanism and Influence of Quaternary Structure on Enzyme–Cofactor Intermediate Stability. ACS Catal 2017. [DOI: 10.1021/acscatal.6b02100] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Tim Börner
- Division
of Biotechnology, Department of Chemistry, Lund University, 221 00 Lund, Sweden
| | - Sebastian Rämisch
- Schief
Lab, Department of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, California 92037, United States
| | - Eswar R. Reddem
- Laboratory
of Biophysical Chemistry, Groningen Biomolecular Sciences and Biotechnology
Institute, University of Groningen, 9747 AG Groningen, The Netherlands
| | | | | | - Andy-Mark W. H. Thunnissen
- Laboratory
of Biophysical Chemistry, Groningen Biomolecular Sciences and Biotechnology
Institute, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Patrick Adlercreutz
- Division
of Biotechnology, Department of Chemistry, Lund University, 221 00 Lund, Sweden
| | - Carl Grey
- Division
of Biotechnology, Department of Chemistry, Lund University, 221 00 Lund, Sweden
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38
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Zhao G, Wang F, Lang X, He B, Li J, Li X. Facile one-pot fabrication of cellulose nanocrystals and enzymatic synthesis of its esterified derivative in mixed ionic liquids. RSC Adv 2017. [DOI: 10.1039/c7ra02570j] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
As an important cellulose derivative, esterified cellulose nanocrystals (E-CNCs) could be applied in biomedical and chemical industries.
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Affiliation(s)
- Guanglei Zhao
- State Key Laboratory of Pulp and Paper Engineering
- South China University of Technology
- Guangzhou 510641
- China
| | - Fengli Wang
- State Key Laboratory of Pulp and Paper Engineering
- South China University of Technology
- Guangzhou 510641
- China
| | - Xiongfei Lang
- State Key Laboratory of Pulp and Paper Engineering
- South China University of Technology
- Guangzhou 510641
- China
| | - Beihai He
- State Key Laboratory of Pulp and Paper Engineering
- South China University of Technology
- Guangzhou 510641
- China
| | - Junrong Li
- State Key Laboratory of Pulp and Paper Engineering
- South China University of Technology
- Guangzhou 510641
- China
| | - Xiaofeng Li
- State Key Laboratory of Pulp and Paper Engineering
- South China University of Technology
- Guangzhou 510641
- China
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39
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Brühlmann F, Bosijokovic B. Efficient Biochemical Cascade for Accessing Green Leaf Alcohols. Org Process Res Dev 2016. [DOI: 10.1021/acs.oprd.6b00303] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Fredi Brühlmann
- Firmenich SA, Corporate R&D, Route des Jeunes 1, CH-1211 Geneva 8, Switzerland
| | - Bojan Bosijokovic
- Firmenich SA, Corporate R&D, Route des Jeunes 1, CH-1211 Geneva 8, Switzerland
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40
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41
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Zhang Y, Zhang Y, Xie S, Yan M, Ramström O. Lipase-catalyzed kinetic resolution of 3-phenyloxazolidin-2-one derivatives: Cascade O- and N-alkoxycarbonylations. CATAL COMMUN 2016. [DOI: 10.1016/j.catcom.2016.04.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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42
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Morris P, Rios-Solis L, García-Arrazola R, Lye G, Dalby P. Impact of cofactor-binding loop mutations on thermotolerance and activity of E. coli transketolase. Enzyme Microb Technol 2016; 89:85-91. [DOI: 10.1016/j.enzmictec.2016.04.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2015] [Revised: 03/08/2016] [Accepted: 04/03/2016] [Indexed: 10/22/2022]
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43
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Bezborodov AM, Zagustina NA. Enzymatic biocatalysis in chemical synthesis of pharmaceuticals (Review). APPL BIOCHEM MICRO+ 2016. [DOI: 10.1134/s0003683816030030] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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44
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Efficient Enantioselective Biocatalytic Production of a Chiral Intermediate of Sitagliptin by a Newly Filamentous Fungus Isolate. Appl Biochem Biotechnol 2016; 180:695-706. [DOI: 10.1007/s12010-016-2125-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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45
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Substrate ionization energy influences the epoxidation of m-substituted styrenes catalyzed by chloroperoxidase from Caldariomyces fumago. CATAL COMMUN 2016. [DOI: 10.1016/j.catcom.2016.01.017] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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46
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Biró E, Budugan D, Todea A, Péter F, Klébert S, Feczkó T. Recyclable solid-phase biocatalyst with improved stability by sol–gel entrapment of β-d-galactosidase. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.molcatb.2015.11.006] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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47
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Bolivar JM, Schelch S, Mayr T, Nidetzky B. Mesoporous Silica Materials Labeled for Optical Oxygen Sensing and Their Application to Development of a Silica-Supported Oxidoreductase Biocatalyst. ACS Catal 2015. [DOI: 10.1021/acscatal.5b01601] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Juan M. Bolivar
- Institute
of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, A-8010 Graz, Austria
| | - Sabine Schelch
- Institute
of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, A-8010 Graz, Austria
| | - Torsten Mayr
- Institute
of Analytical Chemistry and Food Chemistry, Graz University of Technology, NAWI Graz, Stremayrgasse 9, A-8010 Graz, Austria
| | - Bernd Nidetzky
- Institute
of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, A-8010 Graz, Austria
- Austrian Centre
of Industrial Biotechnology (acib), Petersgasse 14, A-8010 Graz, Austria
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48
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49
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Kara S, Schrittwieser JH, Gargiulo S, Ni Y, Yanase H, Opperman DJ, van Berkel WJH, Hollmann F. Complete Enzymatic Oxidation of Methanol to Carbon Dioxide: Towards More Eco-Efficient Regeneration Systems for Reduced Nicotinamide Cofactors. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500173] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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