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Gomes PT, Rosse IC, Moraes LÂG, Kalapothakis E, de Azevedo CS, Cardoso DC, Cristiano MP. Genetic diversity and relatedness in captive collared peccaries Dicotyles tajacu (Linnaeus, 1758) (Cetartiodactyla: Tayassuidae) estimated by microsatellite genotyping using high-throughput sequencing: Implications for their conservation and reintroduction. Zoo Biol 2023; 42:789-796. [PMID: 37466265 DOI: 10.1002/zoo.21796] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 05/04/2023] [Accepted: 07/07/2023] [Indexed: 07/20/2023]
Abstract
The global population of Dicotyles tajacu (Linnaeus, 1758) (Cetartiodactyla: Tayassuidae), commonly known as the collared peccary and distributed in the Neotropics, is currently in decline due to anthropogenic pressures. In this study, five microsatellite loci were used to genetically characterize a group of 20 captive-born collared peccaries intended for reintroduction. This study aimed to evaluate the genetic diversity and relatedness of captive individuals using microsatellite markers. The genetic data generated were used to evaluate the viability of the reintroduction and to propose measures for the management and conservation of this species. In this study, we found relatively high genetic diversity indices, indicating that the group was genetically diverse. Inbreeding coefficients with negative values were observed, indicating an excess of alleles in heterozygosis and an absence of inbreeding. One locus showed deviation from Hardy-Weinberg equilibrium, which may have been caused by the mixing of individuals from different origins. Relatedness analysis indicated that some individuals were highly related, with coefficients indicating they may be first-degree relatives. Our findings indicate that the studied group has enough genetic diversity to be released into nature, but the high individual relatedness found would require the adoption of strategies after the release of animals in the wild to ensure their persistence.
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Affiliation(s)
- Paula Teixeira Gomes
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
| | - Izinara Cruz Rosse
- Departamento de Farmácia, Programa de Pós-Graduação em Biotecnologia, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Laboratório Multiusuário de Bioinformática da Universidade Federal de Ouro Preto (UFOP), Núcleo de Pesquisa em Ciências Biológicas (NUPEB), Ouro Preto, Minas Gerais, Brazil
| | - Lauro Ângelo Gonçalves Moraes
- Laboratório Multiusuário de Bioinformática da Universidade Federal de Ouro Preto (UFOP), Núcleo de Pesquisa em Ciências Biológicas (NUPEB), Ouro Preto, Minas Gerais, Brazil
| | - Evanguedes Kalapothakis
- Departamento de Genética, Evolução e Ecologia, Laboratório de Biotecnologia e Marcadores Moleculares, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil
| | - Cristiano Schetini de Azevedo
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Departamento de Biodiversidade Evolução e Meio Ambiente, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
| | - Danon Clemes Cardoso
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Departamento de Biodiversidade Evolução e Meio Ambiente, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
| | - Maykon Passos Cristiano
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Departamento de Biodiversidade Evolução e Meio Ambiente, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
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Miaretsoa L, Torti V, Petroni F, Valente D, De Gregorio C, Ratsimbazafy J, Carosi M, Giacoma C, Gamba M. Behavioural Correlates of Lemur Scent-Marking in Wild Diademed Sifakas ( Propithecus diadema) in the Maromizaha Forest (Madagascar). Animals (Basel) 2023; 13:2848. [PMID: 37760248 PMCID: PMC10525727 DOI: 10.3390/ani13182848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 08/31/2023] [Accepted: 09/05/2023] [Indexed: 09/29/2023] Open
Abstract
Scent-marking through odours from excreta and glandular secretions is widespread in mammals. Among primates, diurnal group-living lemurs show different deployment modalities as part of their strategy to increase signal detection. We studied the diademed sifaka (Propithecus diadema) in the Maromizaha New Protected Area, Eastern Madagascar. We tested whether the scent-marking deposition occurred using a sequential rubbing of different body parts. We also tested if glands (i.e., deposition of glandular secretions) were more frequently rubbed than genital orifices (i.e., deposition of excreta) by comparing different kinds of rubbing behaviour. We then investigated if the depositor's rank and sex affected the sequence of rubbing behaviour, the height at which the scent-marking happened, and the tree part targeted. We found that glandular secretions were often deposited with urine, especially in dominant individuals. The probability of anogenital and chest marking was highest, but chest rubbing most frequently occurred in dominant males. Markings were deposited at similar heights across age and sex, and tree trunks were the most used substrate. Males exhibited long and more complex scent-marking sequences than females. Our results indirectly support the idea that diademed sifakas deploy a sex-dimorphic mixture of glandular secretions and excreta to increase the probability of signal detection by conspecifics.
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Affiliation(s)
- Longondraza Miaretsoa
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy (D.V.)
- Groupe d’Étude et de Recherche sur les Primates de Madagascar (GERP), Fort Duchesne, Antananarivo 101, Madagascar
| | - Valeria Torti
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy (D.V.)
| | - Flavia Petroni
- Department of Sciences, Roma Tre University, 00146 Rome, Italy (M.C.)
| | - Daria Valente
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy (D.V.)
| | - Chiara De Gregorio
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy (D.V.)
| | - Jonah Ratsimbazafy
- Groupe d’Étude et de Recherche sur les Primates de Madagascar (GERP), Fort Duchesne, Antananarivo 101, Madagascar
| | - Monica Carosi
- Department of Sciences, Roma Tre University, 00146 Rome, Italy (M.C.)
| | - Cristina Giacoma
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy (D.V.)
| | - Marco Gamba
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy (D.V.)
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Shao Y, Zhou L, Li F, Zhao L, Zhang BL, Shao F, Chen JW, Chen CY, Bi X, Zhuang XL, Zhu HL, Hu J, Sun Z, Li X, Wang D, Rivas-González I, Wang S, Wang YM, Chen W, Li G, Lu HM, Liu Y, Kuderna LFK, Farh KKH, Fan PF, Yu L, Li M, Liu ZJ, Tiley GP, Yoder AD, Roos C, Hayakawa T, Marques-Bonet T, Rogers J, Stenson PD, Cooper DN, Schierup MH, Yao YG, Zhang YP, Wang W, Qi XG, Zhang G, Wu DD. Phylogenomic analyses provide insights into primate evolution. Science 2023; 380:913-924. [PMID: 37262173 DOI: 10.1126/science.abn6919] [Citation(s) in RCA: 28] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Accepted: 01/26/2023] [Indexed: 06/03/2023]
Abstract
Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate diversity. We present such a study of 50 primate species spanning 38 genera and 14 families, including 27 genomes first reported here, with many from previously less well represented groups, the New World monkeys and the Strepsirrhini. Our analyses reveal heterogeneous rates of genomic rearrangement and gene evolution across primate lineages. Thousands of genes under positive selection in different lineages play roles in the nervous, skeletal, and digestive systems and may have contributed to primate innovations and adaptations. Our study reveals that many key genomic innovations occurred in the Simiiformes ancestral node and may have had an impact on the adaptive radiation of the Simiiformes and human evolution.
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Affiliation(s)
- Yong Shao
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
| | - Long Zhou
- Center of Evolutionary & Organismal Biology, and Women's Hospital at Zhejiang University School of Medicine, Hangzhou 310058, China
| | - Fang Li
- Section for Ecology and Evolution, Department of Biology, University of Copenhagen, DK-2100 Copenhagen, Denmark
- Institute of Animal Sex and Development, ZhejiangWanli University, Ningbo 315100, China
| | - Lan Zhao
- Shaanxi Key Laboratory for Animal Conservation, College of Life Sciences, Northwest University, Xi'an 710069, China
| | - Bao-Lin Zhang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
| | - Feng Shao
- Key Laboratory of Freshwater Fish Reproduction and Development (Ministry of Education), Southwest University School of Life Sciences, Chongqing 400715, China
| | | | - Chun-Yan Chen
- School of Ecology and Environment, Northwestern Polytechnical University, Xi'an 710072, China
| | - Xupeng Bi
- Center of Evolutionary & Organismal Biology, and Women's Hospital at Zhejiang University School of Medicine, Hangzhou 310058, China
| | - Xiao-Lin Zhuang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
- Kunming College of Life Science, University of the Chinese Academy of Sciences, Kunming 650204, China
| | | | - Jiang Hu
- Grandomics Biosciences, Beijing 102206, China
| | - Zongyi Sun
- Grandomics Biosciences, Beijing 102206, China
| | - Xin Li
- Grandomics Biosciences, Beijing 102206, China
| | - Depeng Wang
- Grandomics Biosciences, Beijing 102206, China
| | | | - Sheng Wang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
| | - Yun-Mei Wang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
| | - Wu Chen
- Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou 510070, China
| | - Gang Li
- College of Life Sciences, Shaanxi Normal University, Xi'an 710119, China
| | - Hui-Meng Lu
- School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China
| | - Yang Liu
- College of Life Sciences, Shaanxi Normal University, Xi'an 710119, China
| | - Lukas F K Kuderna
- Institute of Evolutionary Biology (UPF-CSIC), PRBB, 08003 Barcelona, Spain
- Illumina Artificial Intelligence Laboratory, Illumina Inc, San Diego, CA 92122, USA
| | - Kyle Kai-How Farh
- Illumina Artificial Intelligence Laboratory, Illumina Inc, San Diego, CA 92122, USA
| | - Peng-Fei Fan
- School of Life Sciences, Sun Yat-sen University, Guangzhou, Guangdong 510275, China
| | - Li Yu
- State Key Laboratory for Conservation and Utilization of Bio-Resource in Yunnan, School of Life Sciences, Yunnan University, Kunming 650091, China
| | - Ming Li
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Zhi-Jin Liu
- College of Life Sciences, Capital Normal University, Beijing 100048, China
| | - George P Tiley
- Department of Biology, Duke University, Durham, NC 27708, USA
| | - Anne D Yoder
- Department of Biology, Duke University, Durham, NC 27708, USA
| | - Christian Roos
- Gene Bank of Primates and Primate Genetics Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany
| | - Takashi Hayakawa
- Faculty of Environmental Earth Science, Hokkaido University, Sapporo, Hokkaido 060-0810, Japan
- Japan Monkey Centre, Inuyama, Aichi 484-0081, Japan
| | - Tomas Marques-Bonet
- Institute of Evolutionary Biology (UPF-CSIC), PRBB, 08003 Barcelona, Spain
- Catalan Institution of Research and Advanced Studies (ICREA), Passeig de Lluís Companys, 23, 08010 Barcelona, Spain
- CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), 08028 Barcelona, Spain
- Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona, Edifici ICTA-ICP, c/ Columnes s/n, 08193 Cerdanyola del Vallès, Barcelona, Spain
| | - Jeffrey Rogers
- Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Peter D Stenson
- Institute of Medical Genetics, School of Medicine, Cardiff University, Cardiff CF14 4XN, UK
| | - David N Cooper
- Institute of Medical Genetics, School of Medicine, Cardiff University, Cardiff CF14 4XN, UK
| | | | - Yong-Gang Yao
- Kunming College of Life Science, University of the Chinese Academy of Sciences, Kunming 650204, China
- Key Laboratory of Animal Models and Human Disease Mechanisms of Chinese Academy of Sciences & Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
- Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming 650201, China
- National Resource Center for Non-Human Primates, Kunming Primate Research Center, and National Research Facility for Phenotypic & Genetic Analysis of Model Animals (Primate Facility), Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650107, China
| | - Ya-Ping Zhang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
- Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming 650201, China
- National Resource Center for Non-Human Primates, Kunming Primate Research Center, and National Research Facility for Phenotypic & Genetic Analysis of Model Animals (Primate Facility), Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650107, China
| | - Wen Wang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
- School of Ecology and Environment, Northwestern Polytechnical University, Xi'an 710072, China
- Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming 650201, China
| | - Xiao-Guang Qi
- Shaanxi Key Laboratory for Animal Conservation, College of Life Sciences, Northwest University, Xi'an 710069, China
| | - Guojie Zhang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
- Center of Evolutionary & Organismal Biology, and Women's Hospital at Zhejiang University School of Medicine, Hangzhou 310058, China
- Section for Ecology and Evolution, Department of Biology, University of Copenhagen, DK-2100 Copenhagen, Denmark
- Liangzhu Laboratory, Zhejiang University Medical Center, Hangzhou 311121, China
| | - Dong-Dong Wu
- State Key Laboratory of Genetic Resources and Evolution, Kunming Natural History Museum of Zoology, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China
- Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming 650201, China
- National Resource Center for Non-Human Primates, Kunming Primate Research Center, and National Research Facility for Phenotypic & Genetic Analysis of Model Animals (Primate Facility), Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650107, China
- KIZ-CUHK Joint Laboratory of Bioresources and Molecular Research in Common Diseases, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650204, China
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Hiebert K, Gardhouse S, Sarvi J, Herrin B, Miller K, Chelladurai JJ. Identification and treatment of Strongyloides cebus in captive ring-tailed lemurs (Lemur catta) in the midwestern United States. Vet Parasitol Reg Stud Reports 2023; 39:100839. [PMID: 36878624 DOI: 10.1016/j.vprsr.2023.100839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 01/26/2023] [Accepted: 02/03/2023] [Indexed: 02/10/2023]
Abstract
Strongyloides spp. are parasitic enteric nematodes that infect a variety of hosts. While the Strongyloides spp. that affect humans, apes, and Old World primates have been previously identified, this genus has not been as fully investigated in prosimian species such as ring-tailed lemurs (Lemur catta). A high burden (4+) of larvated eggs and larvae were identified in the fecal samples of two captive ring-tailed lemurs during routine intake examination at a zoo in the midwestern United States. Conventional PCR targeting the 18S RNA gene of nematodes was used identified the parasite as Strongyloides cebus. The lemurs were initially treated with 0.2 mg/kg ivermectin orally twice, two weeks apart. Repeat fecal sampling showed persistent, but decreased eggs and larvae from 4+ to 3+. Ivermectin treatment was repeated with the addition of fenbendazole at 50 mg/kg orally once daily for 3 days. No parasite stages were seen on fecal samples one week and six weeks after the last ivermectin indicating successful clearance of the infection.
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Affiliation(s)
- Kara Hiebert
- Departments of Clinical Sciences, College of Veterinary of Medicine, Kansas State University, 1800 S Denison Ave, Manhattan, KS 66506., United States of America.
| | - Sara Gardhouse
- Departments of Clinical Sciences, College of Veterinary of Medicine, Kansas State University, 1800 S Denison Ave, Manhattan, KS 66506., United States of America
| | - Jasmine Sarvi
- Departments of Clinical Sciences, College of Veterinary of Medicine, Kansas State University, 1800 S Denison Ave, Manhattan, KS 66506., United States of America
| | - Brian Herrin
- Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, 1800 S Denison Ave, Manhattan, KS 66506, United States of America
| | - Kamilyah Miller
- Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, 1800 S Denison Ave, Manhattan, KS 66506, United States of America
| | - Jeba Jesudoss Chelladurai
- Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, 1800 S Denison Ave, Manhattan, KS 66506, United States of America
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Bornbusch SL, Greene LK, Rahobilalaina S, Calkins S, Rothman RS, Clarke TA, LaFleur M, Drea CM. Gut microbiota of ring-tailed lemurs (Lemur catta) vary across natural and captive populations and correlate with environmental microbiota. Anim Microbiome 2022; 4:29. [PMID: 35484581 PMCID: PMC9052671 DOI: 10.1186/s42523-022-00176-x] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Accepted: 03/29/2022] [Indexed: 01/12/2023] Open
Abstract
BACKGROUND Inter-population variation in host-associated microbiota reflects differences in the hosts' environments, but this characterization is typically based on studies comparing few populations. The diversity of natural habitats and captivity conditions occupied by any given host species has not been captured in these comparisons. Moreover, intraspecific variation in gut microbiota, generally attributed to diet, may also stem from differential acquisition of environmental microbes-an understudied mechanism by which host microbiomes are directly shaped by environmental microbes. To more comprehensively characterize gut microbiota in an ecologically flexible host, the ring-tailed lemur (Lemur catta; n = 209), while also investigating the role of environmental acquisition, we used 16S rRNA sequencing of lemur gut and soil microbiota sampled from up to 13 settings, eight in the wilderness of Madagascar and five in captivity in Madagascar or the U.S. Based on matched fecal and soil samples, we used microbial source tracking to examine covariation between the two types of consortia. RESULTS The diversity of lemur gut microbes varied markedly within and between settings. Microbial diversity was not consistently greater in wild than in captive lemurs, indicating that this metric is not necessarily an indicator of host habitat or environmental condition. Variation in microbial composition was inconsistent both with a single, representative gut community for wild conspecifics and with a universal 'signal of captivity' that homogenizes the gut consortia of captive animals. Despite the similar, commercial diets of captive lemurs on both continents, lemur gut microbiomes within Madagascar were compositionally most similar, suggesting that non-dietary factors govern some of the variability. In particular, soil microbial communities varied across geographic locations, with the few samples from different continents being the most distinct, and there was significant and context-specific covariation between gut and soil microbiota. CONCLUSIONS As one of the broadest, single-species investigations of primate microbiota, our study highlights that gut consortia are sensitive to multiple scales of environmental differences. This finding begs a reevaluation of the simple 'captive vs. wild' dichotomy. Beyond the important implications for animal care, health, and conservation, our finding that environmental acquisition may mediate aspects of host-associated consortia further expands the framework for how host-associated and environmental microbes interact across different microbial landscapes.
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Affiliation(s)
- Sally L. Bornbusch
- Department of Evolutionary Anthropology, Duke University, Durham, NC USA
| | | | | | - Samantha Calkins
- Department of Psychology, Program in Animal Behavior and Conservation, Hunter College, New York, NY USA
| | - Ryan S. Rothman
- Institute for the Conservation of Tropical Environments, Interdepartmental Doctoral Program in Anthropological Sciences, Stony Brook University, Stony Brook, NY USA
| | - Tara A. Clarke
- Department of Sociology and Anthropology, North Carolina State University, Raleigh, NC USA
| | - Marni LaFleur
- Department of Anthropology, University of San Diego, 5998 Alcala Park, San Diego, CA USA
| | - Christine M. Drea
- Department of Evolutionary Anthropology, Duke University, Durham, NC USA
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Miaretsoa L, Cascella A, Vadàla L, Valente D, De Gregorio C, Torti V, Norscia I, Ratsimbazafy J, Friard O, Giacoma C, Gamba M. Marking Versus Overmarking: Spatial and Behavioral Patterns of Scent Marking in Wild Diademed Sifaka (Propithecus diadema). INT J PRIMATOL 2022. [DOI: 10.1007/s10764-022-00292-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
AbstractIn mammals, olfactory communication plays an essential role in territorial and mating dynamics. Scent depositions in various species, including lemurs, can be placed via marking or overmarking (marking over previous depositions). We focused on the role that marking and overmarking play in territorial defence and intrasexual competition. We investigated these aspects in diademed sifaka (Propithecus diadema) in the primary rainforest of Maromizaha (eastern Madagascar). We collected scent marking data for five groups from April to November 2018 and from May to December 2019. We aimed to understand whether the lemurs deposited scent marks homogeneously across the home range and whether sex, rank, and occurrence of intergroup encounters affected the lemur’s deposition rate. We also asked whether males overmarked adult females more often than other depositions, and the marking and overmarking rates changed between the migration and non-migration seasons. We found that scent marking was performed higher in peripheral and overlapping areas than in the home range central areas. In addition, males had higher scent marking rates, but intergroup encounters did not affect deposition rates. Males showed higher rates of overmarking and primarily targeted dominant females’ depositions, particularly during the “migration” season (including premating and mating seasons). Our findings suggest a border-marking strategy in Propithecus diadema. More frequent scent marking in the “migration” season suggests intrasexual competition in males. Our results suggest that marking is associated with territorial and resource defence, suggesting that it plays a role in monopolizing females using a mate-guarding strategy and may also serve for males’ self-advertisement to females and subordinate depositors.
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Inbreeding is associated with shorter early-life telomere length in a wild passerine. CONSERV GENET 2022. [DOI: 10.1007/s10592-022-01441-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
AbstractInbreeding can have negative effects on survival and reproduction, which may be of conservation concern in small and isolated populations. However, the physiological mechanisms underlying inbreeding depression are not well-known. The length of telomeres, the DNA sequences protecting chromosome ends, has been associated with health or fitness in several species. We investigated effects of inbreeding on early-life telomere length in two small island populations of wild house sparrows (Passer domesticus) known to be affected by inbreeding depression. Using genomic measures of inbreeding we found that inbred nestling house sparrows (n = 371) have significantly shorter telomeres. Using pedigree-based estimates of inbreeding we found a tendency for inbred nestling house sparrows to have shorter telomeres (n = 1195). This negative effect of inbreeding on telomere length may have been complemented by a heterosis effect resulting in longer telomeres in individuals that were less inbred than the population average. Furthermore, we found some evidence of stronger effects of inbreeding on telomere length in males than females. Thus, telomere length may reveal subtle costs of inbreeding in the wild and demonstrate a route by which inbreeding negatively impacts the physiological state of an organism already at early life-history stages.
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Ning Y, Roberts NJ, Qi J, Peng Z, Long Z, Zhou S, Gu J, Hou Z, Yang E, Ren Y, Lang J, Liang Z, Zhang M, Ma J, Jiang G. Inbreeding status and implications for Amur tigers. Anim Conserv 2021. [DOI: 10.1111/acv.12761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Y. Ning
- College of Life Science Jilin Agricultural University Changchun China
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
| | - N. J. Roberts
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
| | - J. Qi
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
- School of Forestry Northeast Forestry University Harbin China
| | - Z. Peng
- School of Basic Medical Sciences Nanchang University Nanchang China
| | - Z. Long
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
| | - S. Zhou
- Heilongjiang Research Institute of Wildlife Harbin China
| | - J. Gu
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
| | - Z. Hou
- College of Wildlife and Protected Area Northeast Forestry University Harbin China
| | - E. Yang
- Wildlife Conservation Society Hunchun China
| | - Y. Ren
- Wildlife Conservation Society Hunchun China
| | - J. Lang
- Jilin Hunchun Amur Tiger National Nature Reserve Hunchun China
| | - Z. Liang
- Heilongjiang Laoyeling Amur Tiger National Nature Reserve Dongning China
| | - M. Zhang
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
| | - J. Ma
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
| | - G. Jiang
- Feline Research Center of National Forestry and Grassland Administration College of Wildlife and Protected Area Northeast Forestry University Harbin China
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Brothers are better than nothing: first report of incestuous mating and inbreeding depression in a freshwater decapod crustacean. ZOOLOGY 2021; 151:125990. [DOI: 10.1016/j.zool.2021.125990] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Revised: 12/08/2021] [Accepted: 12/20/2021] [Indexed: 11/20/2022]
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10
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Cheng Z, Tian X, Zhong Z, Li P, Sun D, Bai J, Meng Y, Zhang S, Zhang Y, Wang L, Liu D. Reintroduction, distribution, population dynamics and conservation of a species formerly extinct in the wild: A review of thirty-five years of successful Milu (Elaphurus davidianus) reintroduction in China. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01860] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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11
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Linking personality and health to use of space in the gray partridge: perspectives for management. EUR J WILDLIFE RES 2021. [DOI: 10.1007/s10344-021-01526-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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12
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Chandrashekar A, Knierim JA, Khan S, Raboin DL, Venkatesh S, Clarke TA, Cuozzo FP, LaFleur M, Lawler RR, Parga JA, Rasamimanana HR, Reuter KE, Sauther ML, Baden AL. Genetic population structure of endangered ring-tailed lemurs ( Lemur catta) from nine sites in southern Madagascar. Ecol Evol 2020; 10:8030-8043. [PMID: 32788959 PMCID: PMC7417237 DOI: 10.1002/ece3.6337] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 03/31/2020] [Accepted: 04/09/2020] [Indexed: 11/06/2022] Open
Abstract
Madagascar's ring-tailed lemurs (Lemur catta) are experiencing rapid population declines due to ongoing habitat loss and fragmentation, as well as increasing exploitation for bushmeat and the illegal pet trade. Despite being the focus of extensive and ongoing behavioral studies, there is comparatively little known about the genetic population structuring of the species. Here, we present the most comprehensive population genetic analysis of ring-tailed lemurs to date from across their likely remaining geographic range. We assessed levels of genetic diversity and population genetic structure using multilocus genotypes for 106 adult individuals from nine geographically representative localities. Population structure and F ST analyses revealed moderate genetic differentiation with localities being geographically partitioned into northern, southern, western and also potentially central clusters. Overall genetic diversity, in terms of allelic richness and observed heterozygosity, was high in the species (AR = 4.74, H O = 0.811). In fact, it is the highest among all published lemur estimates to date. While these results are encouraging, ring-tailed lemurs are currently affected by ongoing habitat fragmentation and occur at lower densities in poorer quality habitats. The effects of continued isolation and fragmentation, coupled with climate-driven environmental instability, will therefore likely impede the long-term viability of the species.
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Affiliation(s)
- Aparna Chandrashekar
- Department of AnthropologyHunter College of the City University of New YorkNew YorkNYUSA
- Present address:
San Diego Zoo Global Institute for Conservation ResearchSan DiegoCAUSA
| | - Jessica A. Knierim
- Animal Behavior and Conservation ProgramDepartment of PsychologyHunter College of the City University of New YorkNew YorkNYUSA
- Present address:
Wildlife AllianceNew YorkNYUSA
| | - Sohail Khan
- Department of AnthropologyHunter College of the City University of New YorkNew YorkNYUSA
| | - Dominique L. Raboin
- Animal Behavior and Conservation ProgramDepartment of PsychologyHunter College of the City University of New YorkNew YorkNYUSA
- Present address:
Rutgers UniversityNew BrunswickNJUSA
| | - Sateesh Venkatesh
- Animal Behavior and Conservation ProgramDepartment of PsychologyHunter College of the City University of New YorkNew YorkNYUSA
| | - Tara A. Clarke
- Department of Sociology and AnthropologyNorth Carolina State UniversityRaleighNCUSA
| | | | - Marni LaFleur
- Department of AnthropologyUniversity of San DiegoSan DiegoCAUSA
- Lemur Love, Inc.San DiegoCAUSA
| | - Richard R. Lawler
- Department of Sociology and AnthropologyJames Madison UniversityHarrisonburgVAUSA
| | - Joyce A. Parga
- Department of AnthropologyCalifornia State University‐Los AngelesLos AngelesCAUSA
| | | | - Kim E. Reuter
- Pet Lemur SurveyHoused by the University of UtahSalt Lake CityUTUSA
| | | | - Andrea L. Baden
- Department of AnthropologyHunter College of the City University of New YorkNew YorkNYUSA
- Department of AnthropologyThe Graduate Center of the City University of New YorkNew YorkNYUSA
- The New York Consortium in Evolutionary Primatology (NYCEP)New YorkNYUSA
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13
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Ogami T, Yasui H, Yoshimura A, Yamagata Y. Identification of Anther Length QTL and Construction of Chromosome Segment Substitution Lines of Oryza longistaminata. PLANTS 2019; 8:plants8100388. [PMID: 31569590 PMCID: PMC6843423 DOI: 10.3390/plants8100388] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 09/22/2019] [Accepted: 09/29/2019] [Indexed: 02/04/2023]
Abstract
Life histories and breeding systems strongly affect the genetic diversity of seed plants, but the genetic architectures that promote outcrossing in Oryza longistaminata, a perennial wild species in Africa, are not understood. We conducted a genetic analysis of the anther length of O. longistaminata accession W1508 using advanced backcross quantitative trait locus (QTL) analysis and chromosomal segment substitution lines (CSSLs) in the genetic background of O. sativa Taichung 65 (T65), with simple sequence repeat markers. QTL analysis of the BC3F1 population (n = 100) revealed that four main QTL regions on chromosomes 3, 5, and 6 were associated to anther length. We selected a minimum set of BC3F2 plants for the development of CSSLs to cover as much of the W1508 genome as possible. The additional minor QTLs were suggested in the regional QTL analysis, using 21 to 24 plants in each of the selected BC3F2 population. The main QTLs found on chromosomes 3, 5, and 6 were validated and designated qATL3, qATL5, qATL6.1, and qATL6.2, as novel QTLs identified in O. longistaminata in the mapping populations of 94, 88, 70, and 95 BC3F4 plants. qATL3, qATL5, and qATL6.1 likely contributed to anther length by cell elongation, whereas qATL6.2 likely contributed by cell multiplication. The QTLs were confirmed again in an evaluation of the W1508ILs. In several chromosome segment substitution lines without the four validated QTLs, the anthers were also longer than those of T65, suggesting that other QTLs also increase anther length in W1508. The cloning and diversity analyses of genes conferring anther length QTLs promotes utilization of the genetic resources of wild species, and the understanding of haplotype evolution on the differentiation of annuality and perenniality in the genus Oryza.
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Affiliation(s)
- Takayuki Ogami
- Plant Breeding Laboratory, Faculty of Agriculture, Kyushu University. 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Hideshi Yasui
- Plant Breeding Laboratory, Faculty of Agriculture, Kyushu University. 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Atsushi Yoshimura
- Plant Breeding Laboratory, Faculty of Agriculture, Kyushu University. 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Yoshiyuki Yamagata
- Plant Breeding Laboratory, Faculty of Agriculture, Kyushu University. 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
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14
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Grogan KE, Harris RL, Boulet M, Drea CM. Genetic variation at MHC class II loci influences both olfactory signals and scent discrimination in ring-tailed lemurs. BMC Evol Biol 2019; 19:171. [PMID: 31438845 PMCID: PMC6704550 DOI: 10.1186/s12862-019-1486-0] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2018] [Accepted: 07/21/2019] [Indexed: 01/29/2023] Open
Abstract
BACKGROUND Diversity at the Major Histocompatibility Complex (MHC) is critical to health and fitness, such that MHC genotype may predict an individual's quality or compatibility as a competitor, ally, or mate. Moreover, because MHC products can influence the components of bodily secretions, an individual's body odors may signal its MHC composition and influence partner identification or mate choice. Here, we investigated MHC-based signaling and recipient sensitivity by testing for odor-gene covariance and behavioral discrimination of MHC diversity and pairwise dissimilarity in a strepsirrhine primate, the ring-tailed lemur (Lemur catta). METHODS First, we coupled genotyping of the MHC class II gene, DRB, with gas chromatography-mass spectrometry of genital gland secretions to investigate if functional genetic diversity is signaled by the chemical diversity of lemur scent secretions. We also assessed if the chemical similarity between individuals correlated with their MHC-DRB similarity. Next, we assessed if lemurs discriminated this chemically encoded, genetic information in opposite-sex conspecifics. RESULTS We found that both sexes signaled overall MHC-DRB diversity and pairwise MHC-DRB similarity via genital secretions, but in a sex- and season-dependent manner. Additionally, the sexes discriminated absolute and relative MHC-DRB diversity in the genital odors of opposite-sex conspecifics, suggesting that lemur genital odors function to advertise genetic quality. CONCLUSIONS In summary, genital odors of ring-tailed lemurs provide honest information about an individual's absolute and relative MHC quality. Complementing evidence in humans and Old World monkeys, we suggest that reliance on scent signals to communicate MHC quality may be important across the primate lineage.
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Affiliation(s)
- Kathleen E Grogan
- University Program in Ecology, Duke University, Durham, NC, USA.
- Department of Evolutionary Anthropology, Duke University, Durham, NC, USA.
- Department of Psychology, Emory University, Atlanta, GA, USA.
- Pennsylvania State University, 516 Carpenter Building, University Park, PA, 16802, USA.
| | - Rachel L Harris
- Department of Evolutionary Anthropology, Duke University, Durham, NC, USA
| | - Marylène Boulet
- Department of Biological Sciences, Bishop's University, Sherbrooke, Canada
| | - Christine M Drea
- University Program in Ecology, Duke University, Durham, NC, USA
- Department of Evolutionary Anthropology, Duke University, Durham, NC, USA
- Department of Biology, Duke University, Durham, USA
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15
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Cornec C, Robert A, Rybak F, Hingrat Y. Male vocalizations convey information on kinship and inbreeding in a lekking bird. Ecol Evol 2019; 9:4421-4430. [PMID: 31031916 PMCID: PMC6476769 DOI: 10.1002/ece3.4986] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2018] [Revised: 01/15/2019] [Accepted: 01/21/2019] [Indexed: 01/06/2023] Open
Abstract
Kinship and inbreeding are two major components involved in sexual selection and mating system evolution. However, the mechanisms underlying recognition and discrimination of genetically related or inbred individuals remain unclear. We investigated whether kinship and inbreeding information is related to low-frequency vocalizations, "booms," produced by males during their courtship in the lekking houbara bustard (Chlamydotis undulata undulata). Based on a captive breeding program where the pedigree of all males is known, we investigated the similarity of booms' acoustic parameters among captive males more or less individually inbred and therefore genetically related with each other. In the wild, we investigated the relationship between the spatial distribution of males within leks and the similarity of acoustic parameters of their booms. In the captive population, we found (a) a relationship between the individual inbreeding level of captive males and their vocalization parameters; (b) that kin share similar frequency and temporal characteristics of their vocalizations. In the wild, we found no evidence for spatial structuring of males based on their acoustic parameters, in agreement with previous genetic findings on the absence of kin association within houbara bustard leks. Overall, our results indicate that genetic information potentially related to both the identity and quality of males is contained in their vocalizations.
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Affiliation(s)
- Clément Cornec
- Institut des Neurosciences Paris‐SaclayUniversité Paris‐Sud, CNRS (UMR 9197)OrsayFrance
- Emirates Center for Wildlife PropagationMissourMorocco
| | - Alexandre Robert
- Centre d'Ecologie et des Sciences de la Conservation (CESCO), Muséum national d'Histoire naturelle, Centre National de la Recherche ScientifiqueSorbonne‐UniversitéParisFrance
| | - Fanny Rybak
- Institut des Neurosciences Paris‐SaclayUniversité Paris‐Sud, CNRS (UMR 9197)OrsayFrance
| | - Yves Hingrat
- Reneco International Wildlife Consultants LLCAbu DhabiUAE
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16
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Abstract
Conservation genetics is a branch of conservation biology that uses molecular data to assist in the conservation and management of imperiled populations, subspecies, and species. In this review, I examine conservation action plans (CAPs)—instrumental documents designed to influence conservation policy—for selected primate species. I use the information contained in CAPs as a means to guide this review. The primary genetics-based topics that are mentioned in CAPs are genetic connectivity, inbreeding, and subspecies/species delimitation. I discuss these topics as well as historical demographic inference and hybridization using examples from wild primate species to illustrate the myriad ways in which genetics can assist in conservation efforts. I also discuss some recent technological advances such as genomic capture techniques and the potential to do molecular work in remote locations.
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Affiliation(s)
- Richard R. Lawler
- Department of Sociology and Anthropology, James Madison University, Harrisonburg, Virginia 22807, USA
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17
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Coombes HA, Stockley P, Hurst JL. Female Chemical Signalling Underlying Reproduction in Mammals. J Chem Ecol 2018; 44:851-873. [PMID: 29992368 PMCID: PMC6096499 DOI: 10.1007/s10886-018-0981-x] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Revised: 05/31/2018] [Accepted: 06/25/2018] [Indexed: 12/21/2022]
Abstract
Chemical communication plays many key roles in mammalian reproduction, although attention has focused particularly on male scent signalling. Here, we review evidence that female chemical signals also play important roles in sexual attraction, in mediating reproductive competition and cooperation between females, and in maternal care, all central to female reproductive success. Female odours function not only to advertise sexual receptivity and location, they can also have important physiological priming effects on male development and sperm production. However, the extent to which female scents are used to assess the quality of females as potential mates has received little attention. Female investment in scent signalling is strongly influenced by the social structure and breeding system of the species. Although investment is typically male-biased, high competition between females can lead to a reversed pattern of female- biased investment. As among males, scent marking and counter-marking are often used to advertise territory defence and high social rank. Female odours have been implicated in the reproductive suppression of young or subordinate females across a range of social systems, with females of lower competitive ability potentially benefiting by delaying reproduction until conditions are more favourable. Further, the ability to recognise individuals, group members and kin through scent underpins group cohesion and cooperation in many social species, as well as playing an important role in mother-offspring recognition. However, despite the diversity of female scent signals, chemical communication in female mammals remains relatively understudied and poorly understood. We highlight several key areas of future research that are worthy of further investigation.
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Affiliation(s)
- Holly A Coombes
- Mammalian Behaviour and Evolution Group, Institute of Integrative Biology, University of Liverpool, Leahurst Campus, Chester High Road, Neston, CH64 7TE, UK.
| | - Paula Stockley
- Mammalian Behaviour and Evolution Group, Institute of Integrative Biology, University of Liverpool, Leahurst Campus, Chester High Road, Neston, CH64 7TE, UK
| | - Jane L Hurst
- Mammalian Behaviour and Evolution Group, Institute of Integrative Biology, University of Liverpool, Leahurst Campus, Chester High Road, Neston, CH64 7TE, UK
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18
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Warburton EM, Vonhof MJ. From individual heterogeneity to population-level overdispersion: quantifying the relative roles of host exposure and parasite establishment in driving aggregated helminth distributions. Int J Parasitol 2018; 48:309-318. [DOI: 10.1016/j.ijpara.2017.10.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2017] [Revised: 10/17/2017] [Accepted: 10/21/2017] [Indexed: 01/25/2023]
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19
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Grogan KE, Sauther ML, Cuozzo FP, Drea CM. Genetic wealth, population health: Major histocompatibility complex variation in captive and wild ring-tailed lemurs ( Lemur catta). Ecol Evol 2017; 7:7638-7649. [PMID: 29043021 PMCID: PMC5632616 DOI: 10.1002/ece3.3317] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2017] [Revised: 07/13/2017] [Accepted: 07/18/2017] [Indexed: 12/24/2022] Open
Abstract
Across species, diversity at the major histocompatibility complex (MHC) is critical to individual disease resistance and, hence, to population health; however, MHC diversity can be reduced in small, fragmented, or isolated populations. Given the need for comparative studies of functional genetic diversity, we investigated whether MHC diversity differs between populations which are open, that is experiencing gene flow, versus populations which are closed, that is isolated from other populations. Using the endangered ring-tailed lemur (Lemur catta) as a model, we compared two populations under long-term study: a relatively "open," wild population (n = 180) derived from Bezà Mahafaly Special Reserve, Madagascar (2003-2013) and a "closed," captive population (n = 121) derived from the Duke Lemur Center (DLC, 1980-2013) and from the Indianapolis and Cincinnati Zoos (2012). For all animals, we assessed MHC-DRB diversity and, across populations, we compared the number of unique MHC-DRB alleles and their distributions. Wild individuals possessed more MHC-DRB alleles than did captive individuals, and overall, the wild population had more unique MHC-DRB alleles that were more evenly distributed than did the captive population. Despite management efforts to maintain or increase genetic diversity in the DLC population, MHC diversity remained static from 1980 to 2010. Since 2010, however, captive-breeding efforts resulted in the MHC diversity of offspring increasing to a level commensurate with that found in wild individuals. Therefore, loss of genetic diversity in lemurs, owing to small founder populations or reduced gene flow, can be mitigated by managed breeding efforts. Quantifying MHC diversity within individuals and between populations is the necessary first step to identifying potential improvements to captive management and conservation plans.
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Affiliation(s)
- Kathleen E. Grogan
- University Program in EcologyDuke UniversityDurhamNCUSA
- Department of Evolutionary AnthropologyDuke UniversityDurhamNCUSA
| | | | - Frank P. Cuozzo
- Lajuma Research CentreLouis Trichardt (Makhado)0920South Africa
| | - Christine M. Drea
- University Program in EcologyDuke UniversityDurhamNCUSA
- Department of Evolutionary AnthropologyDuke UniversityDurhamNCUSA
- Department of BiologyDuke UniversityDurhamNCUSA
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20
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Helenbrook WD, Stehman SV, Shields WM, Whipps CM. Association of Anthropogenic Disturbances and Intestinal Parasitism in Ecuadorian Mantled Howler Monkeys, Alouatta palliata aequatorialis. Folia Primatol (Basel) 2017; 88:307-322. [PMID: 28957800 DOI: 10.1159/000479687] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2017] [Accepted: 07/23/2017] [Indexed: 11/19/2022]
Abstract
Forest disturbance and human encroachment have the potential to influence intestinal parasite communities in animal hosts by modifying nutritional health, physiological stress, host densities, contact rates, and ranging patterns. Anthropogenic disturbances also have the ability to affect the ecological landscape of parasitic disease, potentially impacting the health of both wildlife and people. Our research investigated the association of forest disturbance and human encroachment on intestinal parasite communities in mantled howler monkeys, Alouatta palliata aequatorialis. We found that individual parasite species prevalence was associated with group size and forest disturbance. Proximity to people was not a direct factor influencing intestinal parasitism; rather, several human proximity indices were related to group size, which was in turn related to overall species richness and the presence of specific parasite species. These results, coupled with previous findings, suggest that anthropogenic disturbances are likely influencing intestinal parasite communities. Though no single study has definitively explained all relationships between anthropogenic disturbances and intestinal parasitism, we propose that our models are appropriate for meta-analysis testing across other species and environments.
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Mitchell J, Vitikainen EIK, Wells DA, Cant MA, Nichols HJ. Heterozygosity but not inbreeding coefficient predicts parasite burdens in the banded mongoose. J Zool (1987) 2016. [DOI: 10.1111/jzo.12424] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- J. Mitchell
- School of Natural Science and Psychology Liverpool John Moores University Liverpool UK
| | - E. I. K. Vitikainen
- Centre for Ecology and Conservation University of Exeter (Penryn campus) Penryn Cornwall UK
| | - D. A. Wells
- School of Natural Science and Psychology Liverpool John Moores University Liverpool UK
- Department of Animal Behaviour University of Bielefeld Bielefeld Germany
| | - M. A. Cant
- Centre for Ecology and Conservation University of Exeter (Penryn campus) Penryn Cornwall UK
| | - H. J. Nichols
- School of Natural Science and Psychology Liverpool John Moores University Liverpool UK
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22
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Grogan KE, McGinnis GJ, Sauther ML, Cuozzo FP, Drea CM. Next-generation genotyping of hypervariable loci in many individuals of a non-model species: technical and theoretical implications. BMC Genomics 2016; 17:204. [PMID: 26957424 PMCID: PMC4782575 DOI: 10.1186/s12864-016-2503-y] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2015] [Accepted: 02/18/2016] [Indexed: 01/23/2023] Open
Abstract
BACKGROUND Across species, diversity at the Major Histocompatibility Complex (MHC) is critical to disease resistance and population health; however, use of MHC diversity to quantify the genetic health of populations has been hampered by the extreme variation found in MHC genes. Next generation sequencing (NGS) technology generates sufficient data to genotype even the most diverse species, but workflows for distinguishing artifacts from alleles are still under development. We used NGS to evaluate the MHC diversity of over 300 captive and wild ring-tailed lemurs (Lemur catta: Primates: Mammalia). We modified a published workflow to address errors that arise from deep sequencing individuals and tested for evidence of selection at the most diverse MHC genes. RESULTS In addition to evaluating the accuracy of 454 Titanium and Ion Torrent PGM for genotyping large populations at hypervariable genes, we suggested modifications to improve current methods of allele calling. Using these modifications, we genotyped 302 out of 319 individuals, obtaining an average sequencing depth of over 1000 reads per amplicon. We identified 55 MHC-DRB alleles, 51 of which were previously undescribed, and provide the first sequences of five additional MHC genes: DOA, DOB, DPA, DQA, and DRA. The additional five MHC genes had one or two alleles each with little sequence variation; however, the 55 MHC-DRB alleles showed a high dN/dS ratio and trans-species polymorphism, indicating a history of positive selection. Because each individual possessed 1-7 MHC-DRB alleles, we suggest that ring-tailed lemurs have four, putatively functional, MHC-DRB copies. CONCLUSIONS In the future, accurate genotyping methods for NGS data will be critical to assessing genetic variation in non-model species. We recommend that future NGS studies increase the proportion of replicated samples, both within and across platforms, particularly for hypervariable genes like the MHC. Quantifying MHC diversity within non-model species is the first step to assessing the relationship of genetic diversity at functional loci to individual fitness and population viability. Owing to MHC-DRB diversity and copy number, ring-tailed lemurs may serve as an ideal model for estimating the interaction between genetic diversity, fitness, and environment, especially regarding endangered species.
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Affiliation(s)
- Kathleen E Grogan
- University Program in Ecology, Duke University, Durham, NC, USA.
- Department of Evolutionary Anthropology, Duke University, Durham, NC, USA.
- Emory University, Room 2006 O. Wayne Rollins Research Center, 1510 Clifton Rd NE, Atlanta, GA, 30322, USA.
| | | | - Michelle L Sauther
- Department of Anthropology, University of Colorado-Boulder, Boulder, CO, USA
| | - Frank P Cuozzo
- Department of Anthropology, University of North Dakota, Grand Forks, ND, USA
| | - Christine M Drea
- University Program in Ecology, Duke University, Durham, NC, USA
- Department of Evolutionary Anthropology, Duke University, Durham, NC, USA
- Department of Biology, Duke University, Durham, USA
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23
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Pastorini J, Sauther ML, Sussman RW, Gould L, Cuozzo FP, Fernando P, Nievergelt CM, Mundy NI. Comparison of the genetic variation of captive ring-tailed lemurs with a wild population in Madagascar. Zoo Biol 2015; 34:463-72. [PMID: 26032097 DOI: 10.1002/zoo.21225] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2015] [Revised: 04/15/2015] [Accepted: 05/18/2015] [Indexed: 11/10/2022]
Abstract
Genetic variability among captive and wild ring-tailed lemurs (Lemur catta) was assessed using mitochondrial and nuclear DNA data. A 529 bp segment of mtDNA was sequenced and 9 microsatellite loci were genotyped for 286 ring-tailed lemurs. Samples were obtained from the well-studied L. catta population at the Bezà Mahafaly Special Reserve and from captive animals at six institutions worldwide. We found evidence of possible patrilineal contribution but the absence of matrilineal contribution from the Bezà area, and haplotypes not found in Bezà but present in Ambohimahavelona, Andringitra Massif, and other unknown locations, in the sampled captive population, indicating that the founders of the captive population originated from a wide geographic range. Total genetic variation and relatedness in captive L. catta in the six institutions were similar in extent to that of the wild population in Bezà. Based on the diverse origins of the captive population founders our results suggest the erosion of genetic diversity in the captive population. Sampled individuals from the same institution were more closely related to each other than members of a social group in the wild. Individuals housed at different institutions were less closely related than those of different social groups at Bezà, indicating lower genetic exchange between captive institutions than between social groups in a locality in the wild. Our findings underscore the usefulness of genotyping in determining the geographic origin of captive population founders, obtaining pedigree information if paternity is uncertain, and in maximizing preservation of extant genetic diversity in captivity.
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Affiliation(s)
- Jennifer Pastorini
- Anthropologisches Institut, Universität Zürich, Zürich, Switzerland.,Centre for Conservation and Research, Rajagiriya, Sri Lanka
| | | | - Robert W Sussman
- Department of Anthropology, Washington University, St. Louis, USA
| | - Lisa Gould
- Department of Anthropology, University of Victoria, Victoria, Canada
| | - Frank P Cuozzo
- Department of Anthropology, University of North Dakota, Grand Forks, USA
| | | | | | - Nicholas I Mundy
- Department of Zoology, University of Cambridge, Cambridge, United Kingdom
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24
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Annavi G, Newman C, Buesching CD, Macdonald DW, Burke T, Dugdale HL. Heterozygosity-fitness correlations in a wild mammal population: accounting for parental and environmental effects. Ecol Evol 2014; 4:2594-609. [PMID: 25360289 PMCID: PMC4203301 DOI: 10.1002/ece3.1112] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2014] [Accepted: 04/24/2014] [Indexed: 02/02/2023] Open
Abstract
HFCs (heterozygosity–fitness correlations) measure the direct relationship between an individual's genetic diversity and fitness. The effects of parental heterozygosity and the environment on HFCs are currently under-researched. We investigated these in a high-density U.K. population of European badgers (Meles meles), using a multimodel capture–mark–recapture framework and 35 microsatellite loci. We detected interannual variation in first-year, but not adult, survival probability. Adult females had higher annual survival probabilities than adult males. Cubs with more heterozygous fathers had higher first-year survival, but only in wetter summers; there was no relationship with individual or maternal heterozygosity. Moist soil conditions enhance badger food supply (earthworms), improving survival. In dryer years, higher indiscriminate mortality rates appear to mask differential heterozygosity-related survival effects. This paternal interaction was significant in the most supported model; however, the model-averaged estimate had a relative importance of 0.50 and overlapped zero slightly. First-year survival probabilities were not correlated with the inbreeding coefficient (f); however, small sample sizes limited the power to detect inbreeding depression. Correlations between individual heterozygosity and inbreeding were weak, in line with published meta-analyses showing that HFCs tend to be weak. We found support for general rather than local heterozygosity effects on first-year survival probability, and g2 indicated that our markers had power to detect inbreeding. We emphasize the importance of assessing how environmental stressors can influence the magnitude and direction of HFCs and of considering how parental genetic diversity can affect fitness-related traits, which could play an important role in the evolution of mate choice.
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Affiliation(s)
- Geetha Annavi
- Wildlife Conservation Research Unit, Department of Zoology, Recanati-Kaplan Centre, University of Oxford Tubney House, Abingdon Road, Tubney, Abingdon, Oxfordshire, OX13 5QL, U.K ; NERC Biomolecular Analysis Facility, Department of Animal and Plant Sciences, University of Sheffield Sheffield, S10 2TN, U.K ; Faculty of Science, Department of Biology, University of Putra Malaysia UPM 43400, Serdang, Selangor, Malaysia
| | - Christopher Newman
- Wildlife Conservation Research Unit, Department of Zoology, Recanati-Kaplan Centre, University of Oxford Tubney House, Abingdon Road, Tubney, Abingdon, Oxfordshire, OX13 5QL, U.K
| | - Christina D Buesching
- Wildlife Conservation Research Unit, Department of Zoology, Recanati-Kaplan Centre, University of Oxford Tubney House, Abingdon Road, Tubney, Abingdon, Oxfordshire, OX13 5QL, U.K
| | - David W Macdonald
- Wildlife Conservation Research Unit, Department of Zoology, Recanati-Kaplan Centre, University of Oxford Tubney House, Abingdon Road, Tubney, Abingdon, Oxfordshire, OX13 5QL, U.K
| | - Terry Burke
- NERC Biomolecular Analysis Facility, Department of Animal and Plant Sciences, University of Sheffield Sheffield, S10 2TN, U.K
| | - Hannah L Dugdale
- NERC Biomolecular Analysis Facility, Department of Animal and Plant Sciences, University of Sheffield Sheffield, S10 2TN, U.K ; Theoretical Biology, Centre for Ecological and Evolutionary Studies, University of Groningen PO Box 11103, 9700 CC, Groningen, The Netherlands ; Behavioural Ecology and Self-Organization, Centre for Ecological and Evolutionary Studies, University of Groningen PO Box 11103, 9700 CC, Groningen, The Netherlands
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25
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Hieb EE, Nelson DH, Morris AB. Genetic monitoring reveals loss of microsatellite diversity in a breeding population of the endangered Alabama red-bellied turtle. ENDANGER SPECIES RES 2014. [DOI: 10.3354/esr00581] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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26
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Miller JM, Coltman DW. Assessment of identity disequilibrium and its relation to empirical heterozygosity fitness correlations: a meta-analysis. Mol Ecol 2014; 23:1899-909. [DOI: 10.1111/mec.12707] [Citation(s) in RCA: 63] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2013] [Revised: 02/18/2014] [Accepted: 02/21/2014] [Indexed: 01/31/2023]
Affiliation(s)
- Joshua M. Miller
- Department of Biological Sciences; University of Alberta; Edmonton Alberta T6G 2E9 Canada
| | - David W. Coltman
- Department of Biological Sciences; University of Alberta; Edmonton Alberta T6G 2E9 Canada
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Scriber JM. Climate-Driven Reshuffling of Species and Genes: Potential Conservation Roles for Species Translocations and Recombinant Hybrid Genotypes. INSECTS 2013; 5:1-61. [PMID: 26462579 PMCID: PMC4592632 DOI: 10.3390/insects5010001] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2013] [Revised: 12/04/2013] [Accepted: 12/06/2013] [Indexed: 01/11/2023]
Abstract
Comprising 50%-75% of the world's fauna, insects are a prominent part of biodiversity in communities and ecosystems globally. Biodiversity across all levels of biological classifications is fundamentally based on genetic diversity. However, the integration of genomics and phylogenetics into conservation management may not be as rapid as climate change. The genetics of hybrid introgression as a source of novel variation for ecological divergence and evolutionary speciation (and resilience) may generate adaptive potential and diversity fast enough to respond to locally-altered environmental conditions. Major plant and herbivore hybrid zones with associated communities deserve conservation consideration. This review addresses functional genetics across multi-trophic-level interactions including "invasive species" in various ecosystems as they may become disrupted in different ways by rapid climate change. "Invasive genes" (into new species and populations) need to be recognized for their positive creative potential and addressed in conservation programs. "Genetic rescue" via hybrid translocations may provide needed adaptive flexibility for rapid adaptation to environmental change. While concerns persist for some conservationists, this review emphasizes the positive aspects of hybrids and hybridization. Specific implications of natural genetic introgression are addressed with a few examples from butterflies, including transgressive phenotypes and climate-driven homoploid recombinant hybrid speciation. Some specific examples illustrate these points using the swallowtail butterflies (Papilionidae) with their long-term historical data base (phylogeographical diversity changes) and recent (3-decade) climate-driven temporal and genetic divergence in recombinant homoploid hybrids and relatively recent hybrid speciation of Papilio appalachiensis in North America. Climate-induced "reshuffling" (recombinations) of species composition, genotypes, and genomes may become increasingly ecologically and evolutionarily predictable, but future conservation management programs are more likely to remain constrained by human behavior than by lack of academic knowledge.
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Affiliation(s)
- Jon Mark Scriber
- Department of Entomology, Michigan State University, East Lansing, Michigan, MI 48824, USA.
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.
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Thonhauser KE, Thoß M, Musolf K, Klaus T, Penn DJ. Multiple paternity in wild house mice (Mus musculus musculus): effects on offspring genetic diversity and body mass. Ecol Evol 2013; 4:200-9. [PMID: 24558575 PMCID: PMC3925383 DOI: 10.1002/ece3.920] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2013] [Revised: 11/12/2013] [Accepted: 11/14/2013] [Indexed: 11/18/2022] Open
Abstract
Multiple mating is common in many species, but it is unclear whether multiple paternity enhances offspring genetic diversity or fitness. We conducted a survey on wild house mice (Mus musculus musculus), and we found that in 73 pregnant females, 29% of litters had multiple sires, which is remarkably similar to the 23–26% found in feral populations of Mus musculus domesticus in the USA and Australia, respectively. The question is: How has selection maintained multiple mating in these subspecies since the evolutionary divergence, ca. 2800–6000 years ago? We found no evidence that multiple paternity enhanced females’ litter size, contrary to the fertility assurance or genetic benefits hypotheses. Multiple paternity was associated with reduced mean and variance in offspring body mass, which suggests that females allocate fewer resources or that there is increased intrauterine conflict in multiple-versus single-sired litters. We found increased allelic diversity (though not heterozygosity) in multiple-sired litters, as predicted by the genetic diversity hypothesis. Finally, we found that the dams’ heterozygosity was correlated with the mean heterozygosity of their offspring in single-and multiple-sired litters, suggesting that outbred, heterozygous females were more likely to avoid inbreeding than inbred, homozygous females. Future studies are needed to examine how increased genetic diversity of litters and smaller mean (and variance) offspring body mass associated with multiple paternity affect offspring fitness.
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Affiliation(s)
- Kerstin E Thonhauser
- Konrad Lorenz Institute of Ethology Department of Integrative Biology and Evolution, University of Veterinary Medicine Vienna, Austria
| | - Michaela Thoß
- Konrad Lorenz Institute of Ethology Department of Integrative Biology and Evolution, University of Veterinary Medicine Vienna, Austria
| | - Kerstin Musolf
- Konrad Lorenz Institute of Ethology Department of Integrative Biology and Evolution, University of Veterinary Medicine Vienna, Austria ; Department of Biology, Brooklyn College Brooklyn, New York, USA
| | - Teresa Klaus
- Konrad Lorenz Institute of Ethology Department of Integrative Biology and Evolution, University of Veterinary Medicine Vienna, Austria
| | - Dustin J Penn
- Konrad Lorenz Institute of Ethology Department of Integrative Biology and Evolution, University of Veterinary Medicine Vienna, Austria
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Charpentier MJE, Drea CM. Victims of infanticide and conspecific bite wounding in a female-dominant primate: a long-term study. PLoS One 2013; 8:e82830. [PMID: 24367560 PMCID: PMC3867408 DOI: 10.1371/journal.pone.0082830] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2013] [Accepted: 10/28/2013] [Indexed: 11/25/2022] Open
Abstract
The aggression animals receive from conspecifics varies between individuals across their lifetime. As poignantly evidenced by infanticide, for example, aggression can have dramatic fitness consequences. Nevertheless, we understand little about the sources of variation in received aggression, particularly in females. Using a female-dominant species renowned for aggressivity in both sexes, we tested for potential social, demographic, and genetic patterns in the frequency with which animals were wounded by conspecifics. Our study included 243 captive, ring-tailed lemurs (Lemur catta), followed from infancy to adulthood over a 35-year time span. We extracted injury, social, and life-history information from colony records and calculated neutral heterozygosity for a subset of animals, as an estimate of genetic diversity. Focusing on victims rather than aggressors, we used General Linear Models to explain bite-wound patterns at different life stages. In infancy, maternal age best predicted wounds received, as infants born to young mothers were the most frequent infanticide victims. In adulthood, sex best predicted wounds received, as males were three times more likely than females to be seriously injured. No relation emerged between wounds received and the other variables studied. Beyond the generally expected costs of adult male intrasexual aggression, we suggest possible additive costs associated with female-dominant societies - those suffered by young mothers engaged in aggressive disputes and those suffered by adult males aggressively targeted by both sexes. We propose that infanticide in lemurs may be a costly by-product of aggressively mediated, female social dominance. Accordingly, the benefits of female behavioral 'masculinization' accrued to females through priority of access to resources, may be partially offset by early costs in reproductive success. Understanding the factors that influence lifetime patterns of conspecific wounding is critical to evaluating the fitness costs associated with social living; however, these costs may vary substantially between societies.
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Affiliation(s)
- Marie J. E. Charpentier
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina, United States of America
- Department of Biology, Duke University, Durham, North Carolina, United States of America
- CEFE-CNRS, UMR 5175, Montpellier, France
| | - Christine M. Drea
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina, United States of America
- Department of Biology, Duke University, Durham, North Carolina, United States of America
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30
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Elias BA, Shipley LA, McCusker S, Sayler RD, Johnson TR. Effects of genetic management on reproduction, growth, and survival in captive endangered pygmy rabbits ( Brachylagus idahoensis). J Mammal 2013; 94:1282-1292. [PMID: 32287380 PMCID: PMC7108654 DOI: 10.1644/12-mamm-a-224.1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2012] [Accepted: 07/13/2013] [Indexed: 11/19/2022] Open
Abstract
A quarter of all lagomorph species worldwide are threatened with extinction. Captive breeding programs, such as that developed for the Columbia Basin (CB) pygmy rabbit (Brachylagus idahoensis), sometimes are implemented as emergency conservation measures to restore small, genetically distinct populations. However, small source populations also may have low genetic diversity, which may influence attributes related to fitness, including growth, survival, and reproduction. We used mixed-effects regression models to explore the influence of genetic pedigree (% CB) on pairing success, growth, and survival during the 10-year captive breeding program at Washington State University, which included controlled pairings and outbreeding with pygmy rabbits from Idaho. Pairing success, juvenile growth, and juvenile survival declined with increasing CB pedigree of 1 or both parents, suggesting inbreeding depression among the small number of related founders. Demographic variables such as age, sex, and previous pregnancies, and environmental variables such as month and temperature at birth also were associated with production of pygmy rabbits. Our study illustrates the difficulty of retaining a unique genome of a small source population while simultaneously producing enough rabbits for restoration into natural habitat as part of endangered species recovery programs.
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Affiliation(s)
- Becky A Elias
- 115 Johnson Hall, School of the Environment, Washington State University, Pullman, WA 99164-6410, USA
| | - Lisa A Shipley
- 115 Johnson Hall, School of the Environment, Washington State University, Pullman, WA 99164-6410, USA.,Center for Reproductive Biology, Washington State University, Pullman, WA 99164, USA
| | - Sarah McCusker
- 115 Johnson Hall, School of the Environment, Washington State University, Pullman, WA 99164-6410, USA
| | - Rodney D Sayler
- 115 Johnson Hall, School of the Environment, Washington State University, Pullman, WA 99164-6410, USA
| | - Timothy R Johnson
- Department of Statistical Science, 875 Perimeter Drive, University of Idaho, Moscow, ID 83844-1104, USA
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31
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Tennenhouse EM. Inbreeding Avoidance in Male Primates: A Response to Female Mate Choice? Ethology 2013. [DOI: 10.1111/eth.12187] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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32
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Hammerly SC, Morrow ME, Johnson JA. A comparison of pedigree- and DNA-based measures for identifying inbreeding depression in the critically endangered Attwater's Prairie-chicken. Mol Ecol 2013; 22:5313-28. [DOI: 10.1111/mec.12482] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2013] [Revised: 07/19/2013] [Accepted: 07/23/2013] [Indexed: 11/29/2022]
Affiliation(s)
- Susan C. Hammerly
- Department of Biological Sciences; Institute of Applied Sciences; University of North Texas; 1155 Union Circle, #310559 Denton TX 76203 USA
| | - Michael E. Morrow
- United States Fish and Wildlife Service; Attwater Prairie Chicken National Wildlife Refuge; PO Box 519 Eagle Lake TX 77434 USA
| | - Jeff A. Johnson
- Department of Biological Sciences; Institute of Applied Sciences; University of North Texas; 1155 Union Circle, #310559 Denton TX 76203 USA
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Hagell S, Whipple AV, Chambers CL. Population genetic patterns among social groups of the endangered Central American spider monkey (Ateles geoffroyi) in a human-dominated landscape. Ecol Evol 2013; 3:1388-99. [PMID: 23762523 PMCID: PMC3678491 DOI: 10.1002/ece3.547] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2013] [Revised: 03/04/2013] [Accepted: 03/09/2013] [Indexed: 12/04/2022] Open
Abstract
SPIDER MONKEYS (GENUS: Ateles) are a widespread Neotropical primate with a highly plastic socioecological strategy. However, the Central American species, Ateles geoffroyi, was recently re-listed as endangered due to the accelerated loss of forest across the subcontinent. There is inconsistent evidence that spider monkey populations could persist when actively protected, but their long-term viability in unprotected, human-dominated landscapes is not known. We analyzed noninvasive genetic samples from 185 individuals in 14 putative social groups on the Rivas Isthmus in southwestern Nicaragua. We found evidence of weak but significant genetic structure in the mitochondrial control region and in eight nuclear microsatellite loci plus negative spatial autocorrelation in Fst and kinship. The overall pattern suggests strong localized mating and at least historical female-biased dispersal, as is expected for this species. Heterozygosity was significantly lower than expected under random mating and lower than that found in other spider monkey populations, possibly reflecting a recent decline in genetic diversity and a threat from inbreeding. We conclude that despite a long history of human disturbance on this landscape, spider monkeys were until recently successful at maintaining gene flow. We consider the recent decline to be further indication of accelerated anthropogenic disturbance, but also of an opportunity to conserve native biodiversity. Spider monkeys are one of many wildlife species in Central America that is threatened by land cover change, and an apt example of how landscape-scale conservation planning could be used to ensure long-term persistence.
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Affiliation(s)
- Suzanne Hagell
- School of Forestry, Northern Arizona UniversityFlagstaff, Arizona, 86011
| | - Amy V Whipple
- Merriam Powell Center for Environmental Research and Department of Biological Sciences, Northern Arizona UniversityFlagstaff, Arizona, 86011
| | - Carol L Chambers
- School of Forestry, Northern Arizona UniversityFlagstaff, Arizona, 86011
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34
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Cuterebrid myiasis (Diptera: Oestridae) in captive ring-tailed lemurs (Lemur catta) at a South Carolina zoo. J Zoo Wildl Med 2012; 42:504-7. [PMID: 22950327 DOI: 10.1638/2010-0179.1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
In September 2008, two ring-tailed lemurs (Lemur catta), comprising a mother-daughter pair, at the Greenville Zoo, Greenville, South Carolina, USA, were diagnosed with cuterebrid myiasis (Diptera: Oestridae) subsequent to sudden death of the adult lemur. On necropsy, a single bot warble was discovered in the subcutis of the axillary region. Histopathology revealed a severe eosinophilic bronchopneumonia. The juvenile lemur was inspected and found to have warbles on three separate dates in late September. One representative bot fly larva was identified as a Cuterebra sp. that normally infests lagomorphs in the southeastern United States. Cuterebrid myiasis is rarely reported in lemurs and has not been previously associated with pneumonia or death in these animals.
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35
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Reed DH, Fox CW, Enders LS, Kristensen TN. Inbreeding-stress interactions: evolutionary and conservation consequences. Ann N Y Acad Sci 2012; 1256:33-48. [PMID: 22583046 DOI: 10.1111/j.1749-6632.2012.06548.x] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
The effect of environmental stress on the magnitude of inbreeding depression has a long history of intensive study. Inbreeding-stress interactions are of great importance to the viability of populations of conservation concern and have numerous evolutionary ramifications. However, such interactions are controversial. Several meta-analyses over the last decade, combined with omic studies, have provided considerable insight into the generality of inbreeding-stress interactions, its physiological basis, and have provided the foundation for future studies. In this review, we examine the genetic and physiological mechanisms proposed to explain why inbreeding-stress interactions occur. We specifically examine whether the increase in inbreeding depression with increasing stress could be due to a concomitant increase in phenotypic variation, using a larger data set than any previous study. Phenotypic variation does usually increase with stress, and this increase can explain some of the inbreeding-stress interaction, but it cannot explain all of it. Overall, research suggests that inbreeding-stress interactions can occur via multiple independent channels, though the relative contribution of each of the mechanisms is unknown. To better understand the causes and consequences of inbreeding-stress interactions in natural populations, future research should focus on elucidating the genetic architecture of such interactions and quantifying naturally occurring levels of stress in the wild.
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Affiliation(s)
- David H Reed
- Department of Biology, University of Louisville, Louisville, Kentucky, USA
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Parga JA, Sauther ML, Cuozzo FP, Jacky IAY, Lawler RR. Evaluating ring-tailed lemurs (Lemur catta) from southwestern Madagascar for a genetic population bottleneck. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2011; 147:21-9. [PMID: 22052208 DOI: 10.1002/ajpa.21603] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2010] [Accepted: 07/19/2011] [Indexed: 11/07/2022]
Abstract
In light of historical and recent anthropogenic influences on Malagasy primate populations, in this study ring-tailed lemur (Lemur catta) samples from two sites in southwestern Madagascar, Beza Mahafaly Special Reserve (BMSR) and Tsimanampetsotsa National Park (TNP), were evaluated for the genetic signature of a population bottleneck. A total of 45 individuals (20 from BMSR and 25 from TNP) were genotyped at seven microsatellite loci. Three methods were used to evaluate these populations for evidence of a historical bottleneck: M-ratio, mode-shift, and heterozygosity excess tests. Three mutation models were used for heterozygosity excess tests: the stepwise mutation model (SMM), two-phase model (TPM), and infinite allele model (IAM). M-ratio estimations indicated a potential bottleneck in both populations under some conditions. Although mode-shift tests did not strongly indicate a population bottleneck in the recent historical past when samples from all individuals were included, a female-only analysis indicated a potential bottleneck in TNP. Heterozygosity excess was indicated under two of the three mutation models (IAM and TPM), with TNP showing stronger evidence of heterozygosity excess than BMSR. Taken together, these results suggest that a bottleneck may have occurred among L. catta in southwestern Madagascar in the recent past. Given knowledge of how current major stochastic climatic events and human-induced change can negatively impact extant lemur populations, it is reasonable that comparable events in the historical past could have caused a population bottleneck. This evaluation additionally functions to highlight the continuing environmental and anthropogenic challenges faced by lemurs in southwestern Madagascar.
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Affiliation(s)
- Joyce A Parga
- Department of Social Sciences, University of Toronto at Scarborough, ON, Canada.
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Olano-Marin J, Mueller JC, Kempenaers B. CORRELATIONS BETWEEN HETEROZYGOSITY AND REPRODUCTIVE SUCCESS IN THE BLUE TIT (CYANISTES CAERULEUS): AN ANALYSIS OF INBREEDING AND SINGLE LOCUS EFFECTS. Evolution 2011; 65:3175-94. [DOI: 10.1111/j.1558-5646.2011.01369.x] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Thoss M, Ilmonen P, Musolf K, Penn DJ. Major histocompatibility complex heterozygosity enhances reproductive success. Mol Ecol 2011; 20:1546-57. [PMID: 21291500 DOI: 10.1111/j.1365-294x.2011.05009.x] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
We investigated how heterozygosity at the major histocompatibility complex (MHC) affects fitness in wild-derived (F2) house mice (Mus musculus musculus). To compare and control for potential confounding effects from close inbreeding and genome-wide heterozygosity, we used mice that were systematically outbred. We assessed how heterozygosity at MHC and background loci (using 15 microsatellite markers on 11 different chromosomes) affects individual survival and reproductive success (RS) in large, semi-natural population enclosures. We found that overall heterozygosity significantly increased RS, and this correlation was entirely explained by heterozygosity at two MHC loci. Moreover, we found that the effects of MHC heterozygosity depend on the level of background heterozygosity, and the benefits of maximal MHC heterozygosity show a curvilinear effect with increasing background heterozygosity. The enhanced RS from MHC heterozygosity was not because of increased survival, and although MHC heterozygosity was correlated with body mass, body mass did not correlate with RS when heterozygosity is controlled. Breeders were more MHC heterozygous than nonbreeders for both sexes, indicating that MHC heterozygosity enhanced fecundity, mating success or both. Our results show that (i) MHC heterozygosity enhances fitness among wild, outbred as well as congenic laboratory mice; (ii) heterozygosity-fitness correlations can potentially be explained by a few loci, such as MHC; (iii) MHC heterozygosity can increase fitness, even without affecting survival, by increasing mating and RS; and (iv) MHC effects depend on background genes, and maximal MHC heterozygosity is most beneficial at intermediate or optimal levels of background heterozygosity.
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Affiliation(s)
- M Thoss
- Konrad Lorenz Institute for Ethology, Austrian Academy of Sciences, Savoyenstrasse 1a, Vienna, Austria
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40
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Spiering PA, Szykman Gunther M, Somers MJ, Wildt DE, Walters M, Wilson AS, Maldonado JE. Inbreeding, heterozygosity and fitness in a reintroduced population of endangered African wild dogs (Lycaon pictus). CONSERV GENET 2010. [DOI: 10.1007/s10592-010-0147-z] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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Crawford JC, Boulet M, Drea CM. Smelling wrong: hormonal contraception in lemurs alters critical female odour cues. Proc Biol Sci 2010; 278:122-30. [PMID: 20667870 DOI: 10.1098/rspb.2010.1203] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
Animals, including humans, use olfaction to assess potential social and sexual partners. Although hormones modulate olfactory cues, we know little about whether contraception affects semiochemical signals and, ultimately, mate choice. We examined the effects of a common contraceptive, medroxyprogesterone acetate (MPA), on the olfactory cues of female ring-tailed lemurs (Lemur catta), and the behavioural response these cues generated in male conspecifics. The genital odorants of contracepted females were dramatically altered, falling well outside the range of normal female variation: MPA decreased the richness and modified the relative abundances of volatile chemicals expressed in labial secretions. Comparisons between treatment groups revealed several indicator compounds that could reliably signal female reproductive status to conspecifics. MPA also changed a female's individual chemical 'signature', while minimizing her chemical distinctiveness relative to other contracepted females. Most remarkably, MPA degraded the chemical patterns that encode honest information about genetic constitution, including individual diversity (heterozygosity) and pairwise relatedness to conspecifics. Lastly, males preferentially investigated the odorants of intact over contracepted females, clearly distinguishing those with immediate reproductive potential. By altering the olfactory cues that signal fertility, individuality, genetic quality and relatedness, contraceptives may disrupt intraspecific interactions in primates, including those relevant to kin recognition and mate choice.
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Affiliation(s)
- Jeremy Chase Crawford
- Department of Evolutionary Anthropology, Box 90383, Duke University, Durham, NC, USA
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42
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Charpentier MJ, Crawford JC, Boulet M, Drea CM. Message ‘scent’: lemurs detect the genetic relatedness and quality of conspecifics via olfactory cues. Anim Behav 2010. [DOI: 10.1016/j.anbehav.2010.04.005] [Citation(s) in RCA: 82] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Hofer M, Pospísil M, Dusek L, Holá J, Hoferová Z, Weiterová L. Basal and induced granulopoiesis in outbred, F1 hybrid and inbred mice: can inbreeding depression influence the experimental practice? Exp Biol Med (Maywood) 2010; 235:928-31. [PMID: 20660092 DOI: 10.1258/ebm.2010.010032] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
In this study we examined differences in selected indices of granulopoiesis in outbred, F(1) hybrid and inbred mouse strains. Specifically, serum granulocyte colony-stimulating factor (G-CSF) levels, numbers of marrow granulocyte-macrophage progenitor cells and morphologically recognizable proliferative marrow granulocytic precursor cells were evaluated. These parameters were determined in untreated controls, and in mice exposed either to a non-specific stimulus (injection of saline) or to a granulopoiesis-enhancing stimulus (administration of a cyclooxygenase-2 inhibitor, meloxicam). Lower levels of G-CSF were detectable in the outbred ICR mice, which also demonstrated an enhanced response to both types of the stimuli. Considering the fact that outbred mice are closer to natural mammalian populations, including human ones, the possibility of using outbred mice, instead of the often used inbred strains, for experiments evaluating the effects of pharmacological interventions on hematopoiesis should be investigated.
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Affiliation(s)
- Michal Hofer
- Institute of Biophysics, Academy of Sciences of the Czech Republic, Brno, Czech Republic.
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Boulet M, Crawford JC, Charpentier MJE, Drea CM. Honest olfactory ornamentation in a female-dominant primate. J Evol Biol 2010; 23:1558-63. [PMID: 20492092 DOI: 10.1111/j.1420-9101.2010.02007.x] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Sexual selection theory predicts that potential mates or competitors signal their quality to conspecifics. Whereas evidence of honest visual or vocal signals in males abounds, evidence of honest signalling via scent or by females is scarce. We previously showed that scent marks in male lemurs seasonally encode information about individual heterozygosity - a reliable predictor of immunocompetence and survivorship. As female lemurs dominate males, compete over resources, and produce sexually differentiated scent marks that likely evolved via direct selection, here we tested whether females also advertise genetic quality via olfactory cues. During the breeding season specifically, individual heterozygosity correlated negatively with the diversity of fatty acids (FAs) expressed in labial secretions and positively with the diversity of heavy FA esters. As odour-gene relationships predictive of health and survivorship emerged during a period critical to mate choice and female competition, we posit that genital scent marks function as honest olfactory ornaments in females.
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Affiliation(s)
- M Boulet
- Department of Evolutionary Anthropology, Duke University, Durham, NC 27708-0383, USA
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Townsend AK, Clark AB, McGowan KJ, Miller AD, Buckles EL. Condition, innate immunity and disease mortality of inbred crows. Proc Biol Sci 2010; 277:2875-83. [PMID: 20444716 DOI: 10.1098/rspb.2010.0480] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Cooperatively breeding American crows (Corvus brachyrhynchos) suffer a severe disease-mediated survival cost from inbreeding, but the proximate mechanisms linking inbreeding to disease are unknown. Here, we examine indices of nestling body condition and innate immunocompetence in relationship to inbreeding and disease mortality. Using an estimate of microsatellite heterozygosity that predicts inbreeding in this population, we show that inbred crows were in relatively poor condition as nestlings, and that body condition index measured in the first 2-33 days after hatching, in addition to inbreeding index, predicted disease probability in the first 34 months of life. Inbred nestlings also mounted a weaker response along one axis of innate immunity: the proportion of bacteria killed in a microbiocidal assay increased as heterozygosity index increased. Relatively poor body condition and low innate immunocompetence are two mechanisms that might predispose inbred crows to ultimate disease mortality. A better understanding of condition-mediated inbreeding depression can guide efforts to minimize disease costs of inbreeding in small populations.
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Affiliation(s)
- Andrea K Townsend
- Fuller Evolutionary Biology Program, Cornell Laboratory of Ornithology, , 159 Sapsucker Woods Road, Ithaca, NY 14850, USA.
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Starling AP, Charpentier MJE, Fitzpatrick C, Scordato ES, Drea CM. Seasonality, sociality, and reproduction: Long-term stressors of ring-tailed lemurs (Lemur catta). Horm Behav 2010; 57:76-85. [PMID: 19804779 DOI: 10.1016/j.yhbeh.2009.09.016] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/24/2009] [Revised: 08/31/2009] [Accepted: 09/27/2009] [Indexed: 11/28/2022]
Abstract
Fecal glucocorticoid (fGC) concentrations are reliable, non-invasive indices of physiological stress that provide insight into an animal's energetic and social demands. To better characterize the long-term stressors in adult members of a female-dominant, seasonally breeding species - the ring-tailed lemur (Lemur catta) - we first validated fecal samples against serum samples and then examined the relationship between fGC concentrations and seasonal, social, demographic, genetic, and reproductive variables. Between 1999 and 2006, we collected 1386 fecal samples from 32 adult, semi-free-ranging animals of both sexes. In males and non-pregnant, non-lactating females, fGC concentrations were significantly elevated during the breeding season, specifically during periods surrounding known conceptions. Moreover, group composition (e.g., multi-male versus one-male) significantly predicted the fGC concentrations of males and females in all reproductive states. In particular, the social instability introduced by intra-male competition likely created a stressor for all animals. We found no relationship, however, between fGC and the sex, age, or heterozygosity of animals. In reproducing females, fGC concentrations were significantly greater during lactation than during the pre-breeding period. During pregnancy, fGC concentrations were elevated in mid-ranking dams, relative to dominant or subordinate dams, and significantly greater during the third trimester than during the first or second trimesters. Thus, in the absence of nutritional stressors, social dominance was a relatively poor predictor of fGC in this female-dominant species. Instead, the animals were maximally challenged by their social circumstances and reproductive events-males by competition for mating opportunities and females by late-term gestation and lactation.
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Affiliation(s)
- Anne P Starling
- Department of Evolutionary Anthropology, Duke University, Durham, NC 27708-0383, USA
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Boulet M, Charpentier MJE, Drea CM. Decoding an olfactory mechanism of kin recognition and inbreeding avoidance in a primate. BMC Evol Biol 2009; 9:281. [PMID: 19958525 PMCID: PMC2799416 DOI: 10.1186/1471-2148-9-281] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2009] [Accepted: 12/03/2009] [Indexed: 01/18/2023] Open
Abstract
BACKGROUND Like other vertebrates, primates recognize their relatives, primarily to minimize inbreeding, but also to facilitate nepotism. Although associative, social learning is typically credited for discrimination of familiar kin, discrimination of unfamiliar kin remains unexplained. As sex-biased dispersal in long-lived species cannot consistently prevent encounters between unfamiliar kin, inbreeding remains a threat and mechanisms to avoid it beg explanation. Using a molecular approach that combined analyses of biochemical and microsatellite markers in 17 female and 19 male ring-tailed lemurs (Lemur catta), we describe odor-gene covariance to establish the feasibility of olfactory-mediated kin recognition. RESULTS Despite derivation from different genital glands, labial and scrotal secretions shared about 170 of their respective 338 and 203 semiochemicals. In addition, these semiochemicals encoded information about genetic relatedness within and between the sexes. Although the sexes showed opposite seasonal patterns in signal complexity, the odor profiles of related individuals (whether same-sex or mixed-sex dyads) converged most strongly in the competitive breeding season. Thus, a strong, mutual olfactory signal of genetic relatedness appeared specifically when such information would be crucial for preventing inbreeding. That weaker signals of genetic relatedness might exist year round could provide a mechanism to explain nepotism between unfamiliar kin. CONCLUSION We suggest that signal convergence between the sexes may reflect strong selective pressures on kin recognition, whereas signal convergence within the sexes may arise as its by-product or function independently to prevent competition between unfamiliar relatives. The link between an individual's genome and its olfactory signals could be mediated by biosynthetic pathways producing polymorphic semiochemicals or by carrier proteins modifying the individual bouquet of olfactory cues. In conclusion, we unveil a possible olfactory mechanism of kin recognition that has specific relevance to understanding inbreeding avoidance and nepotistic behavior observed in free-ranging primates, and broader relevance to understanding the mechanisms of vertebrate olfactory communication.
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Affiliation(s)
- Marylène Boulet
- Department of Evolutionary Anthropology, 108 BioSci BLDG, Box 90383, Duke University, Durham, North Carolina, 27708, USA
- Department of Biology, Bishop's University, 2600 College Street, Sherbrooke, Québec, J1M 1Z7, Canada
| | - Marie JE Charpentier
- Department of Evolutionary Anthropology, 108 BioSci BLDG, Box 90383, Duke University, Durham, North Carolina, 27708, USA
- CEFE-CNRS, 1919 Route de Mende, 34293 Montpellier Cedex 5, France
| | - Christine M Drea
- Department of Evolutionary Anthropology, 108 BioSci BLDG, Box 90383, Duke University, Durham, North Carolina, 27708, USA
- Department of Biology, 108 BioSci BLDG, Box 90383, Duke University, Durham, North Carolina, 27708, USA
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Abstract
Genetic diversity, especially at genes important for immune functioning within the Major Histocompatibility Complex (MHC), has been associated with fitness-related traits, including disease resistance, in many species. Recently, genetic diversity has been associated with mate preferences in humans. Here we asked whether these preferences are adaptive in terms of obtaining healthier mates. We investigated whether genetic diversity (heterozygosity and standardized mean d2) at MHC and nonMHC microsatellite loci, predicted health in 153 individuals. Individuals with greater allelic diversity (d2) at nonMHC loci and at one MHC locus, linked to HLA-DRB1, reported fewer symptoms over a four-month period than individuals with lower d2. In contrast, there were no associations between MHC or nonMHC heterozygosity and health. NonMHC-d2 has previously been found to predict male preferences for female faces. Thus, the current findings suggest that nonMHC diversity may play a role in both natural and sexual selection acting on human populations.
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CHARPENTIER MARIEJE, BOULET MARYLÈNE, DREA CHRISTINEM. Smelling right: the scent of male lemurs advertises genetic quality and relatedness. Mol Ecol 2008; 17:3225-33. [DOI: 10.1111/j.1365-294x.2008.03831.x] [Citation(s) in RCA: 110] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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