Distribution and accumulation of mercury and copper in mangrove sediments in Shenzhen, the world's most rapid urbanized city

Distribution of microbial taxa and genes degrading halogenated organic pollutants in the mangroves

Anthropogenic activities have led to serious contamination of halogenated organic pollutants (HOPs), such as PCBs, PBDEs, and HBCDs, in the mangrove wetland. Biodegradation of HOPs is generally driven by environmental microorganisms harboring dehalogenase genes. However, little is known if HOPs can affect the distributions of HOPs-degrading bacteria and dehalogenase genes in the mangrove wetlands. Historical data suggested that HOPs contamination has been persistent and even deteriorated in the mangrove wetlands in China. We found that the organohalides-respiring bacteria Dehalococcoidia and reductive dehalogenase genes were more prevalent in the subsurface layer sediments (20-30 cm depth; 1.935-9.876 % relative abundance; 71-286 contigs) than the surface layer (0-5 cm depth; 0.174-2.020 % relative abundance; 7-130 contigs). While the genes of haloacid and haloalkane dehalogenases were more abundant in the surface layer (30-100 and 18-138 contigs) than the subsurface layer (22-56 and 50-101 contigs). The abundance of HOPs-degrading genes of reductive dehalogenase, haloacid dehalogenases, AtzA, AtzB, TrzA, TrzN, PcpB, were determined by GeoChip 5.0. Their total abundance ranged from 444.760 to 880.909. Their distributions were mainly associated with the contamination levels of HOPs and strength of anthropogenic activities around the mangrove wetlands. Therefore, the distribution of bacterial taxa and genes involved in HOPs degradation was related to the depth of sediments and affected by the selective stress from HOPs.

Heavy metal dynamics in riverine mangrove systems: A case study on content, migration, and enrichment in surface sediments, pore water, and plants in Zhanjiang, China

Mangroves serve a crucial role as metal accumulators in tropical and subtropical marine ecosystems, particularly in riverine mangroves, which frequently interact with terrestrial sources. In this study, we focused on the Gaoqiao and Jiuzhou Rivers within the Zhanjiang mangrove forest in Guangdong, China, and collected leaves and surface sediments from the dominant mangrove plant, Aegiceras corniculatum, near the riverbanks. We focused on seven heavy metals (Cr, Cu, Zn, As, Cd, Pb, and Hg) in mangrove leaves, surface sediments, and pore water due to their environmental significance and frequent occurrence in mangrove ecosystems. We employed multivariate statistical methods and pollution indicators to assess the potential sources and risk levels of heavy metals in these sediments. Our results reveal that the concentrations of the seven heavy metals in the sediments of the Gaoqiao and Jiuzhou Rivers varied significantly, ranging from 0.03 mg/kg to 100.00 mg/kg. Cd posed the highest ecological risk, followed by Hg and As. The comprehensive potential ecological risk in the Gaoqiao River was lower than that in the Jiuzhou River, likely due to the distribution of industrial enterprises (such as printing and cement plants) in the upper reaches of the Jiuzhou River. Additionally, the heavy metal content in the leaves of A. corniculatum and in pore water within surface sediments ranged from 0.01 to 51.58 mg/kg and 0.001 to 133.70 μg/L, respectively. A significant correlation was observed between the heavy metal concentrations in the A. corniculatum leaves and those in the pore water. Notably, the leaves of A. corniculatum exhibited a remarkable Hg-enrichment capability, highlighting its potential as a mercury accumulator. Most heavy metals in A. corniculatum leaves, pore water, and sediment were concentrated in the middle and upper reaches of the river, primarily due to anthropogenic terrestrial inputs from residential production activities upstream. Consequently, heavy metal pollution in riverine mangroves is primarily associated with human activities such as aquaculture, agricultural planting, and industrial production.

Functional Genes and Transcripts Indicate the Existent and Active Microbial Mercury-Methylating Community in Mangrove Intertidal Sediments of an Urbanized Bay

Mercury (Hg) methylation in mangrove sediments can result in the accumulation of neurotoxic methylmercury (MeHg). Identification of Hg methyltransferase gene hgcA provides the means to directly characterize the microbial Hg-methylating consortia in environments. Hitherto, the microbial Hg-methylating community in mangrove sediments was scarcely investigated. An effort to assess the diversity and abundance of hgcA genes and transcripts and link them to Hg and MeHg contents was made in the mangrove intertidal sediments along the urbanized Shenzhen Bay, China. The hgcA genes and transcripts associated with Thermodesulfobacteria [mainly Geobacteraceae, Syntrophorhabdaceae, Desulfobacterales, and Desulfarculales (these four lineages were previously classified into the Deltaproteobacteria taxon)], as well as Euryarchaeota (mainly Methanomicrobia and Theionarchaea) dominated the hgcA-harboring communities, while Chloroflexota, Nitrospirota, Planctomycetota, and Lentisphaerota-like hgcA sequences accounted for a small proportion. The hgcA genes appeared in greater abundance and diversity than their transcript counterparts in each sampling site. Correlation analysis demonstrated that the MeHg content rather than Hg content significantly correlated with the structure of the existent/active hgcA-harboring community and the abundance of hgcA genes/transcripts. These findings provide better insights into the microbial Hg methylation drivers in mangrove sediments, which could be helpful for understanding the MeHg biotransformation therein.

Mercury contamination is an invisible threat to declining migratory shorebirds along the East Asian-Australasian Flyway

Exposure to pollutants is a potentially crucial but overlooked driver of population declines in shorebirds along the East Asian-Australasian Flyway. We combined knowledge of moult strategy and life history with a standardised sampling protocol to assess mercury (Hg) contamination in 984 individuals across 33 migratory shorebird species on an intercontinental scale. Over one-third of the samples exceeded toxicity benchmarks. Feather Hg was best explained by moulting region, while habitat preference (coastal obligate vs. non-coastal obligate), the proportion of invertebrates in the diet and foraging stratum (foraging mostly on the surface vs. at depth) also contributed, but were less pronounced. Feather Hg was substantially higher in South China (Mai Po and Leizhou), Australia and the Yellow Sea than in temperate and Arctic breeding ranges. Non-coastal obligate species (Tringa genus) frequently encountered in freshwater habitats were at the highest risk. It is important to continue and expand biomonitoring research to assess how other pollutants might impact shorebirds.

Sediment mercury concentration of a subtropical mangrove wetland responded to Hong Kong-Shenzhen industrial development since the 1960s

Mercury (Hg) in coastal wetlands is of great concern due to its acute toxicity. We measured the total Hg content (THg) from a ²¹⁰Pb-dated sediment core obtained from the Futian mangrove wetland in Shenzhen Bay, South China to explore the historical variation and possible sources. Our results extend the sediment THg record back to 1960 and reveal three distinct intervals. Interval I (1960-1974) has low and increasing THg values, averaging 83.0 μg/kg; Interval II (1975-1984) witnesses a remarkably increase, peaking in 1980 (261.6 μg/kg) then remaining elevated; Interval III (1985-2014) shows a steady reduction, averaging 118.4 μg/kg. The good correlation among THg, TOC, and Hg/TOC, and the downstream decrease in monitoring sediment THg consistently suggest that the bulk THg are mainly sourced from the Shenzhen River discharge. The different timing in industrial development attributes the elevated THg concentrations during 1975-1984 to Hong Kong industrial sewage pollution.

Potential for mercury methylation by Asgard archaea in mangrove sediments

Methylmercury (MeHg) is a potent neurotoxin that bioaccumulates along food chains. The conversion of MeHg from mercury (Hg) is mediated by a variety of anaerobic microorganisms carrying hgcAB genes. Mangrove sediments are potential hotspots of microbial Hg methylation; however, the microorganisms responsible for Hg methylation are poorly understood. Here, we conducted metagenomic and metatranscriptomic analyses to investigate the diversity and distribution of putative microbial Hg-methylators in mangrove ecosystems. The highest hgcA abundance and expression occurred in surface sediments in Shenzhen, where the highest MeHg concentration was also observed. We reconstructed 157 metagenome-assembled genomes (MAGs) carrying hgcA and identified several putative novel Hg-methylators, including one Asgard archaea (Lokiarchaeota). Further analysis of MAGs revealed that Deltaproteobacteria, Euryarchaeota, Bacteroidetes, Chloroflexi, and Lokiarchaeota were the most abundant and active Hg-methylating groups, implying their crucial role in MeHg production. By screening publicly available MAGs, 104 additional Asgard MAGs carrying hgcA genes were identified from a wide range of coast, marine, permafrost, and lake sediments. Protein homology modelling predicts that Lokiarchaeota HgcAB proteins contained the highly conserved amino acid sequences and folding structures required for Hg methylation. Phylogenetic tree revealed that hgcA genes from Asgard clustered with fused hgcAB genes, indicating a transitional stage of Asgard hgcA genes. Our findings thus suggest that Asgard archaea are potential novel Hg-methylating microorganisms and play an important role in hgcA evolution.

An eco-sustainable approach towards heavy metals remediation by mangroves from the coastal environment: A critical review

Mangroves provide various ecosystem services, carbon sequestration, biodiversity depository, and livelihoods. They are most abundant in marine and coastal ecosystems and are threatened by toxic contaminants like heavy metals released from various anthropogenic activities. However, they have significant potential to survive in salt-driven environments and accumulate various pollutants. The adverse effects of heavy metals have been extensively studied and recognized as toxic to mangrove species. This study sheds light on the dynamics of heavy metal levels, their absorption, accumulation and transport in the soil environment in a mangrove ecosystem. The article also focuses on the potential of mangrove species to remove heavy metals from marine and coastal environments. This review concludes that mangroves are potential candidates to clean up contaminated water, soil, and sediments through their phytoremediation ability. The accumulation of toxic heavy metals by mangroves is mainly through roots with limited upward translocation. Therefore, promoting the maintenance of biodiversity and stability in the coastal environment is recommended as an environmentally friendly and potentially cost-effective approach.

Geospatial modeling and ecological and human health risk assessments of heavy metals in contaminated mangrove soils

Heavy metal-contaminated wastes can threaten mangrove forests, one of the most biodiverse ecosystems in the world. The study evaluated the geospatial distribution of heavy metals concentrations in soils, the ecological and human health risks, and metal contents in soil fractions and mangrove organisms in the Botafogo estuary, Brazil, one of the most environmentally impacted estuaries in the country. The metal concentrations exceeded by up to 2.6-fold the geochemical background; 91%, 59%, 64%, 31%, and 82% of the soils were contaminated with Cr, Zn, Pb, Cu, and Ni, respectively. Adverse effects to the biota may occur due to Cr, Cu, Ni and Pb exposures. Contents of clay and organic matter were the main factors governing the distribution of metals in soil, contributing to up to 63% of the total variability. However, the geospatial modeling showed that the predictive ability of these variables varied spatially with the metal and location. The ecological and human health risks assessments indicated that the metal concentrations in soils are safe for the environment and human beings. There was a low transfer of metals from the soil to the biota, with values of sediment-biota accumulation factor (SBAF) and biological accumulation coefficients (BAC) lower than 1.0, except for Zn (SBAF = 13.1). The high Zn bioaccumulation by Crassostrea rhizophorae may be associated with the concentrations of Zn in the bioavailable fractions.

Heavy metal pollution and ecological risk assessment in the Maowei sea mangrove, China

The level and ecological impact of heavy metal pollution in the Maowei Sea mangrove are poorly understood. This work first investigated the distribution and ecological risk of Cd, Co, Cr, Cu, Mn, Ni, Pb, and Zn in Maowei Sea mangrove sediments. The results showed that heavy metals were mainly concentrated in the top 10 cm of mangrove stands, declined up to 20 cm deep, and were constant afterwards. Exceptionally, Mn concentration increased significantly with depth in the mudflat. Multiple environmental risk indices indicated that the investigated area was broadly contaminated by heavy metals and that Cd was the dominant contributor to potential ecological risks. However, the biological toxicity posed by these metals was negligible. Multivariate analyses implied that Cd, Co, Cr, Cu, Ni, Pb, and Zn originated mainly from anthropogenic sources, whereas Mn was primarily from natural processes. These findings could provide insightful information for future management of this mangrove.

Depth-related change of sulfate-reducing bacteria community in mangrove sediments: The influence of heavy metal contamination

This study provides new insight towards the effects of heavy metal contamination on sulfate-reducing bacteria (SRB) in mangrove ecosystem. We investigated SRB communities in mangrove sediments (0-30 cm depth) from Futian, Xixiang and Shajing mangrove wetlands in Shenzhen, China, with different heavy metal contamination levels. The results showed that SRB community abundance (1.71 × 10⁷-3.04 × 10⁸ dsrB gene copies g^-1 wet weight sediment) was depth-related and significantly correlated with Cd and Ni concentrations. The α-diversity indices of SRB community (Chao1 = 21.25-84.50, Shannon = 2.31-2.96) were significantly correlated with Cd level in mangrove sediments. Desulfobacteraceae, Desulfobulbaceae and Syntrophobacteraceae acted as major SRB groups in mangrove sediments, and Syntrophobacteraceae was most sensitive to metal contamination. UniFrace clustering analysis revealed that SRB community structure was influenced by the heavy metal concentrations. Moreover, redundancy analysis indicated that Cd and total phosphorus were the major environmental factors affecting the SRB structure in mangrove sediments.

Distribution and assessment of mercury (Hg) in surface sediments of Futian mangrove forest, China

To investigate the distribution of mercury (Hg) in Futian mangrove wetland, surface sediments from land to sea were collected, including Kandelia obovata, Avicennia marina, Sonneratia caseolaris, and mud flat. The ecological risks of Hg in sediments were also assessed. The results showed that mangrove forests acidified sediments and promoted the accumulation of salinity and organic matter in sediments. Hg concentrations in both mangrove forests (154.7-218.4 ng g^-1) and mud flat sediments (226.3-251.9 ng g^-1) surpassed the background level (71.0 ng g^-1). Furthermore, Hg concentrations in sediments decreased gradually from sea to land at all depth. From the bottom to the top layer sediment, Hg concentration decreased gradually in the sediments near land, while it kept vertically stable in the coastal area, indicating its pollution may mainly come from the coastal area rather than the land to some extent. Although the mean values of geo-accumulation indexes revealed uncontaminated to moderately contaminated levels, the mean values of potential ecological risk coefficients revealed considerable ecological risk of Hg to the environment, deserving further attention.

Comparative genomic inference suggests mixotrophic lifestyle for Thorarchaeota

Thorarchaeota are a new archaeal phylum within the Asgard superphylum, whose ancestors have been proposed to play possible ecological roles in cellular evolution. However, little is known about the lifestyles of these uncultured archaea. To provide a better resolution of the ecological roles and metabolic capacity of Thorarchaeota, we obtained Thorarchaeota genomes reconstructed from metagenomes of different depth layers in mangrove and mudflat sediments. These genomes from deep anoxic layers suggest the presence of Thorarchaeota with the potential to degrade organic matter, fix inorganic carbon, reduce sulfur/sulfate and produce acetate. In particular, Thorarchaeota may be involved in ethanol production, nitrogen fixation, nitrite reduction, and arsenic detoxification. Interestingly, these Thorarchaeotal genomes are inferred to contain the tetrahydromethanopterin and tetrahydrofolate Wood-Ljungdahl (WL) pathways for CO₂ reduction, and the latter WL pathway appears to have originated from bacteria. These archaea are predicted to be able to use various inorganic and organic carbon sources, possessing genes inferred to encode ribulose bisphosphate carboxylase-like proteins (normally without RuBisCO activity) and a near-complete Calvin-Benson-Bassham cycle. The existence of eukaryotic selenocysteine insertion sequences and many genes for proteins previously considered eukaryote-specific in Thorarchaeota genomes provide new insights into their evolutionary roles in the origin of eukaryotic cellular complexity. Resolving the metabolic capacities of these enigmatic archaea and their origins will enhance our understanding of the origins of eukaryotes and their roles in ecosystems.