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Almeida L, Colmonero-Costeira I, da Silva MJF, Veracini C, Vasconcelos R. Insights into the Geographical Origins of the Cabo Verde Green Monkey. Genes (Basel) 2024; 15:504. [PMID: 38674438 PMCID: PMC11050204 DOI: 10.3390/genes15040504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Revised: 04/10/2024] [Accepted: 04/16/2024] [Indexed: 04/28/2024] Open
Abstract
The green monkey Chlorocebus sabaeus, L. 1766, native to West Africa, was introduced to the Cabo Verde Archipelago in the 16th century. Historical sources suggest that, due to the importance of Cabo Verde as a commercial entrepôt in the Atlantic slave trade, establishing the precise place of origin of this introduced species is challenging. Non-invasive fecal samples were collected from feral and captive green monkey individuals in Cabo Verde. Two mitochondrial fragments, HVRI and cyt b, were used to confirm the taxonomic identification of the species and to tentatively determine the geographic origin of introduction to the archipelago from the African continent. By comparing the new sequences of this study to previously published ones, it was shown that Cabo Verde individuals have unique haplotypes in the HVRI, while also showing affinities to several populations from north-western coastal Africa in the cyt b, suggesting probable multiple sources of introduction and an undetermined most probable origin. The latter is consistent with historical information, but may also have resulted from solely using mtDNA as a genetic marker and the dispersal characteristics of the species. The limitations of the methodology are discussed and future directions of research are suggested.
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Affiliation(s)
- Lara Almeida
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, 4169-007 Porto, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, 4485-661 Vairão, Portugal
| | - Ivo Colmonero-Costeira
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, 4485-661 Vairão, Portugal
- Organisms and Environment Division, School of Biosciences, Sir Martin Evans Building, Museum Avenue, Cardiff CF10 3AX, Wales, UK
- CIAS, Department of Life Sciences, University of Coimbra, 3000-456 Coimbra, Portugal
| | - Maria J. Ferreira da Silva
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, 4485-661 Vairão, Portugal
- Organisms and Environment Division, School of Biosciences, Sir Martin Evans Building, Museum Avenue, Cardiff CF10 3AX, Wales, UK
| | - Cecilia Veracini
- Centre of Public and Political Administration, Institute of Social and Political Sciences, University of Lisbon, 1300-663 Lisboa, Portugal
| | - Raquel Vasconcelos
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, 4485-661 Vairão, Portugal
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2
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Milich KM. Male-philopatric nonhuman primates and their potential role in understanding the evolution of human sociality. Evol Anthropol 2024; 33:e22014. [PMID: 38109039 DOI: 10.1002/evan.22014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Revised: 11/22/2023] [Accepted: 11/28/2023] [Indexed: 12/19/2023]
Abstract
In most primate species, males transfer out of their natal groups, resulting in groups of unrelated males. However, in a few species, including humans, males remain in their groups and form life-long associations with each other. This pattern of male philopatry is linked with cooperative male behaviors, including border patrols and predator defense. Because females in male-philopatric species form weaker kin networks with each other than in female-philopatric species, they are expected to evolve counter-strategies to male sexual coercion that are relatively independent of support from other females. Studies of male-philopatric nonhuman primates can provide insight into the evolutionary basis of prosocial behaviors, cooperation, and group action in humans and offer comparative models for understanding the sociality of other hominin species. This review will discuss patterns of dispersal and philopatry across primates, explore the resulting male and female behaviors, and argue that male-philopatric nonhuman primate species offer insight into the social and sexual dynamics of hominins throughout evolution.
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Affiliation(s)
- Krista M Milich
- Department of Anthropology, Washington University in St. Louis, St. Louis, Missouri, USA
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3
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Grathwol F, Roos C, Zinner D, Hume B, Porcier SM, Berthet D, Cuisin J, Merker S, Ottoni C, Van Neer W, Dominy NJ, Kopp GH. Adulis and the transshipment of baboons during classical antiquity. eLife 2023; 12:e87513. [PMID: 37767965 PMCID: PMC10597581 DOI: 10.7554/elife.87513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Accepted: 09/27/2023] [Indexed: 09/29/2023] Open
Abstract
Adulis, located on the Red Sea coast in present-day Eritrea, was a bustling trading centre between the first and seventh centuries CE. Several classical geographers-Agatharchides of Cnidus, Pliny the Elder, Strabo-noted the value of Adulis to Greco-Roman Egypt, particularly as an emporium for living animals, including baboons (Papio spp.). Though fragmentary, these accounts predict the Adulite origins of mummified baboons in Ptolemaic catacombs, while inviting questions on the geoprovenance of older (Late Period) baboons recovered from Gabbanat el-Qurud ('Valley of the Monkeys'), Egypt. Dated to ca. 800-540 BCE, these animals could extend the antiquity of Egyptian-Adulite trade by as much as five centuries. Previously, Dominy et al. (2020) used stable isotope analysis to show that two New Kingdom specimens of Papio hamadryas originate from the Horn of Africa. Here, we report the complete mitochondrial genomes from a mummified baboon from Gabbanat el-Qurud and 14 museum specimens with known provenance together with published georeferenced mitochondrial sequence data. Phylogenetic assignment connects the mummified baboon to modern populations of P. hamadryas in Eritrea, Ethiopia, and eastern Sudan. This result, assuming geographical stability of phylogenetic clades, corroborates Greco-Roman historiographies by pointing toward present-day Eritrea, and by extension Adulis, as a source of baboons for Late Period Egyptians. It also establishes geographic continuity with baboons from the fabled Land of Punt (Dominy et al., 2020), giving weight to speculation that Punt and Adulis were essentially the same trading centres separated by a thousand years of history.
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Affiliation(s)
| | - Christian Roos
- Gene Bank of Primates and Primate Genetics Laboratory, German Primate Center, Leibniz Institute for Primate ResearchGöttingenGermany
| | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate ResearchGöttingenGermany
- Department of Primate Cognition, Georg-August-University of GöttingenGöttingenGermany
- Leibniz-ScienceCampus Primate CognitionGöttingenGermany
| | - Benjamin Hume
- Department of Biology, University of KonstanzKonstanzGermany
- SequAna – Sequencing Analysis Core Facility, University of KonstanzKonstanzGermany
| | - Stéphanie M Porcier
- Laboratoire CNRS ASM « Archéologie des Sociétés Méditerranéennes » (UMR 5140), Université Paul-Valéry, LabEx ArchimedeMontpellierFrance
| | | | | | - Stefan Merker
- Department of Zoology, State Museum of Natural History StuttgartStuttgartGermany
| | - Claudio Ottoni
- Centre of Molecular Anthropology for Ancient DNA Studies, Department of Biology, University of Rome Tor VergataRomeItaly
| | - Wim Van Neer
- Royal Belgian Institute of Natural SciencesBrusselsBelgium
- Department of Biology, KU LeuvenLeuvenBelgium
| | - Nathaniel J Dominy
- Departments of Anthropology and Biological Sciences, Dartmouth CollegeHanoverUnited States
- Zukunftskolleg, University of KonstanzKonstanzGermany
| | - Gisela H Kopp
- Department of Biology, University of KonstanzKonstanzGermany
- Zukunftskolleg, University of KonstanzKonstanzGermany
- Department of Migration, Max Planck Institute of Animal BehaviorKonstanzGermany
- Centre for the Advanced Study of Collective Behaviour, University of KonstanzKonstanzGermany
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4
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Kopp GH, Sithaldeen R, Trede F, Grathwol F, Roos C, Zinner D. A Comprehensive Overview of Baboon Phylogenetic History. Genes (Basel) 2023; 14:614. [PMID: 36980887 PMCID: PMC10048742 DOI: 10.3390/genes14030614] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2023] [Revised: 02/13/2023] [Accepted: 02/17/2023] [Indexed: 03/05/2023] Open
Abstract
Baboons (genus Papio) are an intriguing study system to investigate complex evolutionary processes and the evolution of social systems. An increasing number of studies over the last 20 years has shown that considerable incongruences exist between phylogenies based on morphology, mitochondrial, and nuclear sequence data of modern baboons, and hybridization and introgression have been suggested as the main drivers of these patterns. Baboons, therefore, present an excellent opportunity to study these phenomena and their impact on speciation. Advances both in geographic and genomic coverage provide increasing details on the complexity of the phylogeography of baboons. Here, we compile the georeferenced genetic data of baboons and review the current knowledge on baboon phylogeny, discuss the evolutionary processes that may have shaped the patterns that we observe today, and propose future avenues for research.
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Affiliation(s)
- Gisela H. Kopp
- Zukunftskolleg, University of Konstanz, 78457 Konstanz, Germany
- Department of Biology, University of Konstanz, 78457 Konstanz, Germany
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, 78457 Konstanz, Germany
- Department of Migration, Max Planck Institute of Animal Behavior, 78315 Radolfzell, Germany
| | - Riashna Sithaldeen
- Academic Development Programme, Centre for Higher Education and Development, University of Cape Town, Cape Town 7700, South Africa
| | - Franziska Trede
- Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany
| | - Franziska Grathwol
- Department of Biology, University of Konstanz, 78457 Konstanz, Germany
- Department of Migration, Max Planck Institute of Animal Behavior, 78315 Radolfzell, Germany
| | - Christian Roos
- Gene Bank of Primates and Primate Genetics Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany
| | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany
- Department of Primate Cognition, Georg-August-University, 37073 Göttingen, Germany
- Leibniz-ScienceCampus Primate Cognition, 37077 Göttingen, Germany
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Brito JC, Sow AS, Vale CG, Pizzigalli C, Hamidou D, Gonçalves DV, Martínez-Freiría F, Santarém F, Rebelo H, Campos JC, Pleguezuelos JM, Ferreira da Silva MJ, Naia M, Tarroso P, Godinho R, Silva TL, Macedo T, Boratyński Z, Sidatt ZEA, Álvares F. Diversity, distribution and conservation of land mammals in Mauritania, North-West Africa. PLoS One 2022; 17:e0269870. [PMID: 35913972 PMCID: PMC9342785 DOI: 10.1371/journal.pone.0269870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Accepted: 05/27/2022] [Indexed: 11/18/2022] Open
Abstract
Detailed knowledge about biodiversity distribution is critical for monitoring the biological effects of global change processes. Biodiversity knowledge gaps hamper the monitoring of conservation trends and they are especially evident in the desert biome. Mauritania constitutes a remarkable example on how remoteness and regional insecurity affect current knowledge gaps. Mammals remain one of the least studied groups in this country, without a concerted species checklist, the mapping of regions concentrating mammal diversity, or a national assessment of their conservation status. This work assessed the diversity, distribution, and conservation of land mammals in Mauritania. A total of 6,718 published and original observations were assembled in a spatial database and used to update the occurrence status, distribution area, and conservation status. The updated taxonomic list comprises 107 species, including 93 extant, 12 Regionally Extinct, and 2 Extinct in the Wild. Mapping of species distributions allowed locating concentrations of extant mammal species richness in coastal areas, along the Senegal River valley, and in mountain plateaus. Recent regional extinction of large-sized Artiodactyla and Carnivora has been very high (11% extinct species). From the extant mammals, 11% are threatened, including flagship species (e.g., Addax nasomaculatus and Panthera pardus). Species richness is poorly represented by the current protected areas. Despite the strong advances made, 23% of species categorise as Data Deficient. Persisting systematics and distribution uncertainties require further research. Field surveys in currently unexplored areas (northern and south-eastern regions) are urgently needed to increase knowledge about threatened mammals. The long-term conservation of land mammals in Mauritania is embedded in a complex web of socioeconomic and environmental factors that call for collaborative action and investment in sustainable human development. The current work sets the baseline for the future development of detailed research studies and to address the general challenges faced by mammals and biodiversity in the country.
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Affiliation(s)
- José Carlos Brito
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal
- * E-mail:
| | - Andack Saad Sow
- Green Sahel Expertise: Bureau d’Études Spécialise en Environnement, Nouakchott, R.I. Mauritanie
| | - Cândida Gomes Vale
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
| | - Cristian Pizzigalli
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal
| | - Dieng Hamidou
- Faculté des Sciences et Techniques, Université des Sciences, de Technologie et de Médecine de Nouakchott, Nouakchott, R.I. Mauritanie
| | - Duarte Vasconcelos Gonçalves
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
| | - Fernando Martínez-Freiría
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | - Frederico Santarém
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | - Hugo Rebelo
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | - João Carlos Campos
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | | | - Maria Joana Ferreira da Silva
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | - Marisa Naia
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
| | - Pedro Tarroso
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | - Raquel Godinho
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal
- Department of Zoology, University of Johannesburg, Johannesburg, South Africa
| | - Teresa Luísa Silva
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
| | - Tiago Macedo
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal
| | - Zbyszek Boratyński
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | | | - Francisco Álvares
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
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Santander C, Molinaro L, Mutti G, Martínez FI, Mathe J, Ferreira da Silva MJ, Caldon M, Oteo-Garcia G, Aldeias V, Archer W, Bamford M, Biro D, Bobe R, Braun DR, Hammond P, Lüdecke T, Pinto MJ, Meira Paulo L, Stalmans M, Regala FT, Bertolini F, Moltke I, Raveane A, Pagani L, Carvalho S, Capelli C. Genomic variation in baboons from central Mozambique unveils complex evolutionary relationships with other Papio species. BMC Ecol Evol 2022; 22:44. [PMID: 35410131 PMCID: PMC8996594 DOI: 10.1186/s12862-022-01999-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Accepted: 03/28/2022] [Indexed: 11/11/2022] Open
Abstract
Background Gorongosa National Park in Mozambique hosts a large population of baboons, numbering over 200 troops. Gorongosa baboons have been tentatively identified as part of Papio ursinus on the basis of previous limited morphological analysis and a handful of mitochondrial DNA sequences. However, a recent morphological and morphometric analysis of Gorongosa baboons pinpointed the occurrence of several traits intermediate between P. ursinus and P. cynocephalus, leaving open the possibility of past and/or ongoing gene flow in the baboon population of Gorongosa National Park. In order to investigate the evolutionary history of baboons in Gorongosa, we generated high and low coverage whole genome sequence data of Gorongosa baboons and compared it to available Papio genomes. Results We confirmed that P. ursinus is the species closest to Gorongosa baboons. However, the Gorongosa baboon genomes share more derived alleles with P. cynocephalus than P. ursinus does, but no recent gene flow between P. ursinus and P. cynocephalus was detected when available Papio genomes were analyzed. Our results, based on the analysis of autosomal, mitochondrial and Y chromosome data, suggest complex, possibly male-biased, gene flow between Gorongosa baboons and P. cynocephalus, hinting to direct or indirect contributions from baboons belonging to the “northern” Papio clade, and signal the presence of population structure within P. ursinus. Conclusions The analysis of genome data generated from baboon samples collected in central Mozambique highlighted a complex set of evolutionary relationships with other baboons. Our results provided new insights in the population dynamics that have shaped baboon diversity. Supplementary Information The online version contains supplementary material available at 10.1186/s12862-022-01999-7.
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Affiliation(s)
- Cindy Santander
- Department of Biology, University of Copenhagen, Copenhagen, Denmark. .,Department of Zoology, University of Oxford, Oxford, UK.
| | - Ludovica Molinaro
- Estonian Biocentre, Institute of Genomics, University of Tartu, Tartu, Estonia
| | - Giacomo Mutti
- Department of Biosciences, University of Milan, Milan, Italy.,Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy
| | - Felipe I Martínez
- Escuela de Antropología, Facultad de Ciencias Sociales, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Jacinto Mathe
- School of Anthropology, University of Oxford, Oxford, UK
| | - Maria Joana Ferreira da Silva
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, Vairão, Portugal.,CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal.,ONE - Organisms and Environment Group, School of Biosciences, Cardiff University, Sir Martin Evans Building, Cardiff, UK
| | - Matteo Caldon
- Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy
| | - Gonzalo Oteo-Garcia
- Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy
| | - Vera Aldeias
- Interdisciplinary Center for Archaeology and Evolution of Human Behavior (ICArEHB), Universidade do Algarve, Faro, Portugal
| | - Will Archer
- Department of Archaeology, National Museum, Bloemfontein, South Africa
| | - Marion Bamford
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa
| | - Dora Biro
- Department of Zoology, University of Oxford, Oxford, UK
| | - René Bobe
- School of Anthropology, University of Oxford, Oxford, UK.,Gorongosa National Park, Sofala, Mozambique
| | - David R Braun
- Center for the Advanced Study of Human Paleobiology, George Washington University, Washington, USA
| | | | - Tina Lüdecke
- School of Anthropology, University of Oxford, Oxford, UK.,Emmy Noether Group for Hominin Meat Consumption, Max Planck Institute for Chemistry, Mainz, Germany
| | - Maria José Pinto
- AESDA - Associação de Estudos Subterrâneos e Defesa do Ambiente, Lisbon, Portugal
| | - Luis Meira Paulo
- AESDA - Associação de Estudos Subterrâneos e Defesa do Ambiente, Lisbon, Portugal
| | - Marc Stalmans
- Department of Scientific Services, Gorongosa National Park, Chitengo, Sofala Province, Mozambique
| | - Frederico Tátá Regala
- Interdisciplinary Center for Archaeology and Evolution of Human Behavior (ICArEHB), Universidade do Algarve, Faro, Portugal
| | - Francesco Bertolini
- Laboratory of Hematology-Oncology, European Institute of Oncology IRCCS, Milan, Italy
| | - Ida Moltke
- Department of Biology, University of Copenhagen, Copenhagen, Denmark
| | - Alessandro Raveane
- Laboratory of Hematology-Oncology, European Institute of Oncology IRCCS, Milan, Italy
| | - Luca Pagani
- Estonian Biocentre, Institute of Genomics, University of Tartu, Tartu, Estonia.,Department of Biology, University of Padua, Padua, Italy
| | - Susana Carvalho
- School of Anthropology, University of Oxford, Oxford, UK. .,Gorongosa National Park, Sofala, Mozambique.
| | - Cristian Capelli
- Department of Zoology, University of Oxford, Oxford, UK. .,Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy.
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7
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Evans BJ, Peter BM, Melnick DJ, Andayani N, Supriatna J, Zhu J, Tosi AJ. Mitonuclear interactions and introgression genomics of macaque monkeys ( Macaca) highlight the influence of behaviour on genome evolution. Proc Biol Sci 2021; 288:20211756. [PMID: 34610767 PMCID: PMC8493204 DOI: 10.1098/rspb.2021.1756] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2021] [Accepted: 09/14/2021] [Indexed: 12/24/2022] Open
Abstract
In most macaques, females are philopatric and males migrate from their natal ranges, which results in pronounced divergence of mitochondrial genomes within and among species. We therefore predicted that some nuclear genes would have to acquire compensatory mutations to preserve compatibility with diverged interaction partners from the mitochondria. We additionally expected that these sex-differences would have distinctive effects on gene flow in the X and autosomes. Using new genomic data from 29 individuals from eight species of Southeast Asian macaque, we identified evidence of natural selection associated with mitonuclear interactions, including extreme outliers of interspecies differentiation and metrics of positive selection, low intraspecies polymorphism and atypically long runs of homozygosity associated with nuclear-encoded genes that interact with mitochondria-encoded genes. In one individual with introgressed mitochondria, we detected a small but significant enrichment of autosomal introgression blocks from the source species of her mitochondria that contained genes which interact with mitochondria-encoded loci. Our analyses also demonstrate that sex-specific demography sculpts genetic exchange across multiple species boundaries. These findings show that behaviour can have profound but indirect effects on genome evolution by influencing how interacting components of different genomic compartments (mitochondria, the autosomes and the sex chromosomes) move through time and space.
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Affiliation(s)
- Ben J. Evans
- Biology Department, Life Sciences Building Room 328, McMaster University, 1280 Main Street West, Hamilton, Ontario, Canada L8S 4K1
| | - Benjamin M. Peter
- Department of Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig Germany
| | - Don J. Melnick
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, 10th floor Schermerhorn Extension, 119th Street and Amsterdam Avenue, New York, NY 10027 USA
| | - Noviar Andayani
- Department of Biology, Universitas Indonesia, Gedung E, Kampus UI Depok, Depok 16424, Indonesia
| | - Jatna Supriatna
- Department of Biology, Universitas Indonesia, Gedung E, Kampus UI Depok, Depok 16424, Indonesia
- Institute for Sustainable Earth and Resources (I-SER), Gedung Laboratorium Multidisiplin, Universitas Indonesia, Gedung E, Kampus UI Depok, Depok 16424, Indonesia
- Research Center for Climate Change (RCCC-UI), Gedung Laboratorium Multidisiplin, Faculty of Mathematics and Natural Sciences, Universitas Indonesia, Gedung E, Kampus UI Depok, Depok 16424, Indonesia
| | - Jianlong Zhu
- Biology Department, Life Sciences Building Room 328, McMaster University, 1280 Main Street West, Hamilton, Ontario, Canada L8S 4K1
| | - Anthony J. Tosi
- Anthropology Department, Kent State University, 238 Lowry Hall, Kent, OH 44242, USA
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8
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Kin bias and male pair-bond status shape male-male relationships in a multilevel primate society. Behav Ecol Sociobiol 2021. [DOI: 10.1007/s00265-020-02960-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
AbstractMale-male social relationships in group-living mammals vary from fierce competition to the formation of opportunistic coalitions or the development of long-lasting bonds. We investigated male-male relationships in Guinea baboons (Papio papio), a species characterized by male-male tolerance and affiliation. Guinea baboons live in a multi-level society, with units of one reproductively active “primary” male, 1–6 females, and offspring at the core level. Together with “bachelor” males, several units form a party, and 2–3 parties constitute a gang. We aimed to clarify to which degree male relationship patterns varied with relatedness and pair-bond status, i.e., whether males had primary or bachelor status. Data were collected from 24 males in two parties of Guinea baboons near Simenti in the Niokolo-Koba National Park in Senegal. Males maintained differentiated and equitable affiliative relationships (“strong bonds”) with other males that were stable over a 4-year period, irrespective of their pair-bond status. Remarkably, most bachelor males maintained strong bonds with multiple primary males, indicating that bachelor males play an important role in the cohesion of the parties. A clear male dominance hierarchy could not be established due to the high degree of uncertainty in individual rank scores, yet bachelor males were more likely to be found at the low end of the dominance hierarchy. Average relatedness was significantly higher between strongly bonded males, suggesting that kin biases contribute to the social preferences of males. Long-term data will be needed to test how male bonds affect male tenure and ultimately reproductive success.Significance statementMales living in social groups may employ different strategies to increase their reproductive success, from fierce fighting to opportunistic alliance formation or the development of long-term bonds. To shed light on the factors that shape male strategies, we investigated male-male social relationships in the multilevel society of Guinea baboons (Papio papio) where “primary” males are associated with a small number of females and their offspring in “units” while other males are “bachelors.” Strong bonds occurred among and between primary and bachelor males and strongly bonded males were, on average, more closely related. Bachelor males typically had multiple bond partners and thus play an important role in the fabric of Guinea baboon societies. Across primate species, neither dispersal patterns nor social organization clearly map onto the presence of strong bonds in males, suggesting multiple routes to the evolution of male bonds.
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Roos C, Knauf S, Chuma IS, Maille A, Callou C, Sabin R, Portela Miguez R, Zinner D. New mitogenomic lineages in Papio baboons and their phylogeographic implications. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2020; 174:407-417. [PMID: 33244782 DOI: 10.1002/ajpa.24186] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 10/01/2020] [Accepted: 11/09/2020] [Indexed: 01/20/2023]
Abstract
OBJECTIVES Incomplete and/or biased sampling either on a taxonomic or geographic level can lead to delusive phylogenetic and phylogeographic inferences. However, a complete taxonomic and geographical sampling is often and for various reasons impossible, particularly for widespread taxa such as baboons (Papio spp.). Previous studies on baboon phylogeography identified several sampling gaps, some of which we fill by investigating additional material including samples from museum specimens. MATERIALS AND METHODS We generated 10 new mitochondrial genomes either via conventional PCR and subsequent Sanger sequencing from two blood samples or via high-throughput shotgun sequencing from degraded DNA extracted from eight museum specimens. Phylogenetic relationships and divergence times among baboon lineages were determined using maximum-likelihood and Bayesian inferences. RESULTS We identified new mitochondrial lineages in baboons from Central Africa (Chad, the Central African Republic), from the Mahale, and the Udzungwa Mountains (Tanzania), with the latter likely representing a case of mitochondrial capture from sympatric kipunjis (Rungwecebus kipunji). We also found that the mitochondrial clades of olive baboons found in Ivory Coast and Tanzania extend into Niger and the Democratic Republic of Congo, respectively. Moreover, an olive baboon from Sierra Leone carries a mitochondrial haplotype usually found in Guinea baboons, suggesting gene flow between these two species. DISCUSSION The extension of the geographic sampling by including samples from areas difficult to visit or from populations that are most likely extirpated has improved the geographic and temporal resolution of the mitochondrial phylogeny of baboons considerably. Our study also shows the great value of museum material for genetic analyses even when DNA is highly degraded.
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Affiliation(s)
- Christian Roos
- Primate Genetics Laboratory, German Primate Center (DPZ), Leibniz Institute for Primate Research, Göttingen, Germany.,Gene Bank of Primates, German Primate Center (DPZ), Leibniz Institute for Primate Research, Göttingen, Germany
| | - Sascha Knauf
- Work Group Neglected Tropical Diseases, Infection Biology Unit, German Primate Center (DPZ), Leibniz Institute for Primate Research, Göttingen, Germany.,Department for Animal Sciences, Georg-August-University, Göttingen, Germany
| | - Idrissa S Chuma
- Department of Veterinary Medicine and Public Health, College of Veterinary Medicine and Biomedical Sciences, Sokoine University of Agriculture, Morogoro, Tanzania
| | - Audrey Maille
- Unité Eco-Anthropologie (EA), Muséum National d'Histoire Naturelle, CNRS, Musée de l'Homme, Université de Paris, Paris, France
| | - Cécile Callou
- Archéozoologie, Archéobotanique: Sociétés, Pratiques et Environnements (AASPE), Muséum National d'Histoire Naturelle, CNRS, Paris, France
| | | | | | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center (DPZ), Leibniz Institute for Primate Research, Göttingen, Germany.,Leibniz Science Campus Primate Cognition, Göttingen, Germany.,Department of Primate Cognition, Georg-August-University, Göttingen, Germany
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10
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Philopatry at the frontier: A demographically driven scenario for the evolution of multilevel societies in baboons (Papio). J Hum Evol 2020; 146:102819. [PMID: 32736063 DOI: 10.1016/j.jhevol.2020.102819] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2019] [Revised: 04/25/2020] [Accepted: 04/25/2020] [Indexed: 11/23/2022]
Abstract
The baboons (Papio sp.) exhibit marked interspecies variation in social behavior. The thesis presented here argues, first, that male philopatry is a crucial factor, arguably the crucial factor, underlying the other distinctive features (one-male units, multilevel society) shared by hamadryas and Guinea baboons, but not other species of Papio. The second suggestion is that male philopatry as a population norm was not an adaptation to a particular habitat or set of ecological circumstances but evolved in the common ancestor of hamadryas and Guinea baboons as a response to natural selection in the demographic context peculiar to the frontier of a rapidly expanding population. Other derived features of social structure (male-male tolerance, some facultative female dispersal) subsequently evolved to accommodate male philopatry. The mitochondrial genetic population structure of extant baboons preserves a footprint of the initial expansion of 'modern' Papio. Immediately after the expansion, male-philopatric, multilevel populations with a general physical and behavioral resemblance to Guinea baboons occupied the whole northern hemisphere range of the genus. Behavioral and physical autapomorphies of hamadryas baboons evolved in a subpopulation of this ancestral northern base, in response to a less productive habitat of the Horn of Africa. Subsequently, ancestral olive baboons 'reinvented' male dispersal. They and yellow baboons, another male-dispersing species, then replaced most of the male-philopatric northern populations, by male-driven introgression and nuclear swamping.
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11
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Mathieson I, Abascal F, Vinner L, Skoglund P, Pomilla C, Mitchell P, Arthur C, Gurdasani D, Willerslev E, Sandhu MS, Dewar G. An Ancient Baboon Genome Demonstrates Long-Term Population Continuity in Southern Africa. Genome Biol Evol 2020; 12:407-412. [PMID: 32022848 PMCID: PMC7197492 DOI: 10.1093/gbe/evaa019] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/22/2020] [Indexed: 12/19/2022] Open
Abstract
Baboons are one of the most abundant large nonhuman primates and are widely studied in biomedical, behavioral, and anthropological research. Despite this, our knowledge of their evolutionary and demographic history remains incomplete. Here, we report a 0.9-fold coverage genome sequence from a 5800-year-old baboon from the site of Ha Makotoko in Lesotho. The ancient baboon is closely related to present-day Papio ursinus individuals from southern Africa-indicating a high degree of continuity in the southern African baboon population. This level of population continuity is rare in recent human populations but may provide a good model for the evolution of Homo and other large primates over similar timespans in structured populations throughout Africa.
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Affiliation(s)
- Iain Mathieson
- Department of Genetics, Perelman School of Medicine, University of Pennsylvania
| | | | - Lasse Vinner
- Centre for GeoGenetics, University of Copenhagen, Denmark
| | | | - Cristina Pomilla
- Wellcome Sanger Institute, Hinxton, United Kingdom
- Omnigen Biodata Ltd., Cambridge, United Kingdom
| | - Peter Mitchell
- School of Archaeology, University of Oxford, United Kingdom
- School of Geography, Archaeology and Environmental Studies, University of the Witwatersrand, Braamfontein, South Africa
| | - Charles Arthur
- School of Archaeology, University of Oxford, United Kingdom
| | - Deepti Gurdasani
- William Harvey Research Institute, Queen Mary’s University of London, United Kingdom
| | - Eske Willerslev
- Wellcome Sanger Institute, Hinxton, United Kingdom
- Centre for GeoGenetics, University of Copenhagen, Denmark
- Department of Zoology, University of Cambridge, United Kingdom
- The Danish Institute for Advanced Study, University of Southern Denmark, Odense, Denmark
| | - Manj S Sandhu
- Department of Medicine, University of Cambridge, United Kingdom
| | - Genevieve Dewar
- School of Geography, Archaeology and Environmental Studies, University of the Witwatersrand, Braamfontein, South Africa
- Department of Anthropology, University of Toronto Scarborough, Toronto, Ontario, Canada
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12
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Fischer J, Higham JP, Alberts SC, Barrett L, Beehner JC, Bergman TJ, Carter AJ, Collins A, Elton S, Fagot J, Ferreira da Silva MJ, Hammerschmidt K, Henzi P, Jolly CJ, Knauf S, Kopp GH, Rogers J, Roos C, Ross C, Seyfarth RM, Silk J, Snyder-Mackler N, Staedele V, Swedell L, Wilson ML, Zinner D. Insights into the evolution of social systems and species from baboon studies. eLife 2019; 8:e50989. [PMID: 31711570 PMCID: PMC6850771 DOI: 10.7554/elife.50989] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Accepted: 10/16/2019] [Indexed: 01/03/2023] Open
Abstract
Baboons, members of the genus Papio, comprise six closely related species distributed throughout sub-Saharan Africa and southwest Arabia. The species exhibit more ecological flexibility and a wider range of social systems than many other primates. This article summarizes our current knowledge of the natural history of baboons and highlights directions for future research. We suggest that baboons can serve as a valuable model for complex evolutionary processes, such as speciation and hybridization. The evolution of baboons has been heavily shaped by climatic changes and population expansion and fragmentation in the African savanna environment, similar to the processes that acted during human evolution. With accumulating long-term data, and new data from previously understudied species, baboons are ideally suited for investigating the links between sociality, health, longevity and reproductive success. To achieve these aims, we propose a closer integration of studies at the proximate level, including functional genomics, with behavioral and ecological studies.
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Affiliation(s)
- Julia Fischer
- Cognitive Ethology LaboratoryGerman Primate Center, Leibniz-Institute for Primate ResearchGöttingenGermany
- Department of Primate CognitionGeorg-August-University of GöttingenGöttingenGermany
- Leibniz ScienceCampus for Primate CognitionGöttingenGermany
| | - James P Higham
- Department of AnthropologyNew York UniversityNew YorkUnited States
| | - Susan C Alberts
- Department of BiologyDuke UniversityDurhamUnited States
- Department of Evolutionary AnthropologyDuke UniversityDurhamUnited States
- Institute of Primate ResearchNairobiKenya
| | - Louise Barrett
- Department of PsychologyUniversity of LethbridgeLethbridgeCanada
- Applied Behavioural Ecology and Ecosystems Research UnitUniversity of South AfricaPretoriaSouth Africa
| | - Jacinta C Beehner
- Department of PsychologyUniversity of MichiganAnn ArborUnited States
- Department of AnthropologyUniversity of MichiganAnn ArborUnited States
| | - Thore J Bergman
- Department of PsychologyUniversity of MichiganAnn ArborUnited States
- Department of AnthropologyUniversity of MichiganAnn ArborUnited States
| | - Alecia J Carter
- Institut des Sciences de l’Evolution de MontpellierMontpellierFrance
- Université de Montpellier, CNRS, IRD, EPHEMontpellierFrance
| | - Anthony Collins
- Gombe Stream Research CentreJane Goodall InstituteKigomaUnited Republic of Tanzania
| | - Sarah Elton
- Department of AnthropologyDurham UniversityDurhamUnited Kingdom
| | - Joël Fagot
- Aix Marseille UniversitéMarseilleFrance
- Centre National de la Recherche ScientifiqueMontpellierFrance
| | - Maria Joana Ferreira da Silva
- Organisms and Environment Division, School of BiosciencesCardiff UniversityCardiffUnited Kingdom
- Centro de Investigação em Biodiversidade e Recursos GenéticosUniversidade do PortoPortoPortugal
- Centro de Administração e Políticas Públicas, School of Social and PoliticalSciencesUniversity of LisbonLisbonPortugal
| | - Kurt Hammerschmidt
- Cognitive Ethology LaboratoryGerman Primate Center, Leibniz-Institute for Primate ResearchGöttingenGermany
| | - Peter Henzi
- Applied Behavioural Ecology and Ecosystems Research UnitUniversity of South AfricaPretoriaSouth Africa
| | - Clifford J Jolly
- Department of AnthropologyNew York UniversityNew YorkUnited States
- New York Consortium in Evolutionary PrimatologyNew YorkUnited States
| | - Sascha Knauf
- Work Group Neglected Tropical Diseases, Infection Biology UnitGerman Primate Center, Leibniz-Institute for Primate ResearchGöttingenGermany
- Division of Microbiology and Animal HygieneGeorg-August-UniversityGöttingenGermany
| | - Gisela H Kopp
- ZukunftskollegUniversity of KonstanzKonstanzGermany
- Department of BiologyUniversity of KonstanzKonstanzGermany
- Centre for the Advanced Study of Collective BehaviourUniversity of KonstanzKonstanzGermany
- Department of MigrationMax Planck Institute for Animal BehaviourKonstanzGermany
| | - Jeffrey Rogers
- Human Genome Sequencing CenterHoustonUnited States
- Department of Molecular and Human GeneticsBaylor College of MedicineHoustonUnited States
| | - Christian Roos
- Gene Bank of PrimatesGerman Primate Center, Leibniz-Institute for Primate ResearchGöttingenGermany
- Primate Genetics LaboratoryGerman Primate Center, Leibniz-Institute for Primate ResearchGöttingenGermany
| | - Caroline Ross
- Department of Life SciencesRoehampton UniversityLondonUnited Kingdom
| | - Robert M Seyfarth
- Department of PsychologyUniversity of PennsylvaniaPhiladelphiaUnited States
| | - Joan Silk
- School of Human Evolution and Social ChangeArizona State UniversityTempeUnited States
- Institute for Human OriginsArizona State UniversityTempeUnited States
| | - Noah Snyder-Mackler
- Department of PsychologyUniversity of WashingtonSeattleUnited States
- Center for Studies in Demography and EcologyUniversity of WashingtonSeattleUnited States
- National Primate Research CenteUniversity of WashingtonSeattleUnited States
| | - Veronika Staedele
- Department of BiologyDuke UniversityDurhamUnited States
- Max Planck Institute for Evolutionary AnthropologyLeipzigGermany
| | - Larissa Swedell
- New York Consortium in Evolutionary PrimatologyNew YorkUnited States
- Department of AnthropologyQueens College, City University of New YorkNew YorkUnited States
- Department of ArchaeologyUniversity of Cape TownCape TownSouth Africa
| | - Michael L Wilson
- Department of AnthropologyUniversity of MinnesotaMinneapolisUnited States
- Department of Ecology, Evolution and BehaviorUniversity of MinnesotaMinneapolisUnited States
- Institute on the EnvironmentUniversity of MinnesotaSaint PaulUnited States
| | - Dietmar Zinner
- Cognitive Ethology LaboratoryGerman Primate Center, Leibniz-Institute for Primate ResearchGöttingenGermany
- Leibniz ScienceCampus for Primate CognitionGöttingenGermany
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13
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Swedell L, Plummer T. Social evolution in Plio-Pleistocene hominins: Insights from hamadryas baboons and paleoecology. J Hum Evol 2019; 137:102667. [PMID: 31629289 DOI: 10.1016/j.jhevol.2019.102667] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2019] [Revised: 08/21/2019] [Accepted: 08/23/2019] [Indexed: 11/16/2022]
Abstract
Reconstructions of hominin evolution have long benefited from comparisons with nonhuman primates, especially baboons and chimpanzees. The hamadryas baboon (Papio hamadryas) is arguably one of the best such models, as it exhibits both the male kin bonding and the cross-sex pair bonding thought to have been important in hominin evolution. Here we link processes of behavioral evolution in hamadryas baboons with those in a Plio-Pleistocene hominin, provisionally identified as Homo erectus (sensu lato) - a pivotal species in that its larger body and brain size and wider ranging patterns increased female costs of reproduction, increasing the importance of sociality. The combination of these higher costs of reproduction and shifts in diet and food acquisition have previously been argued to have been alleviated either via strengthening of male-female bonds (involving male provisioning and the evolution of monogamy) or via the assistance of older, post-reproductive females (leading to post-reproductive longevity in females, i.e., the grandmother hypothesis). We suggest that both arrangements could have been present in Plio-Pleistocene hominins if they lived in multilevel societies. Here we expand on our earlier scenario with two sets of recent data in support of it, (1) archaeological data from the 2 million year old Oldowan site of Kanjera South, Kenya and other sites that are suggestive of tool dependent foraging on nutrient dense resources (animal carcasses and plant underground storage organs), cooperation, and food sharing; and (2) a pattern of genetic variation in hamadryas baboons that suggests the operation of kin selection among both males and females at multiple levels of society. Taken together, these two sets of data strengthen our model and support the idea of a complex society linked by male-male, male-female, and female-female bonds at multiple levels of social organization in Plio-Pleistocene hominins.
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Affiliation(s)
- Larissa Swedell
- Dept of Anthropology, Queens College, City University of New York, Flushing, NY 11367-1597, USA; New York Consortium in Evolutionary Primatology, New York, NY, USA; Anthropology Program, CUNY Graduate Center, 365 Fifth Avenue, New York, NY 10016, USA; Biology and Psychology Programs, CUNY Graduate Center, 365 Fifth Avenue, New York, NY 10016, USA; Dept of Archaeology, University of Cape Town, Rondebosch 7701, Cape Town, South Africa.
| | - Thomas Plummer
- Dept of Anthropology, Queens College, City University of New York, Flushing, NY 11367-1597, USA; New York Consortium in Evolutionary Primatology, New York, NY, USA; Anthropology Program, CUNY Graduate Center, 365 Fifth Avenue, New York, NY 10016, USA.
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14
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Martinez FI, Capelli C, Ferreira da Silva MJ, Aldeias V, Alemseged Z, Archer W, Bamford M, Biro D, Bobe R, Braun DR, Habermann JM, Lüdecke T, Madiquida H, Mathe J, Negash E, Paulo LM, Pinto M, Stalmans M, Tátá F, Carvalho S. A missing piece of the Papio puzzle: Gorongosa baboon phenostructure and intrageneric relationships. J Hum Evol 2019; 130:1-20. [PMID: 31010537 DOI: 10.1016/j.jhevol.2019.01.007] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Revised: 12/21/2018] [Accepted: 01/17/2019] [Indexed: 12/13/2022]
Abstract
Most authors recognize six baboon species: hamadryas (Papio hamadryas), Guinea (Papio papio), olive (Papio anubis), yellow (Papio cynocephalus), chacma (Papio ursinus), and Kinda (Papio kindae). However, there is still debate regarding the taxonomic status, phylogenetic relationships, and the amount of gene flow occurring between species. Here, we present ongoing research on baboon morphological diversity in Gorongosa National Park (GNP), located in central Mozambique, south of the Zambezi River, at the southern end of the East African Rift System. The park exhibits outstanding ecological diversity and hosts more than 200 baboon troops. Gorongosa National Park baboons have previously been classified as chacma baboons (P. ursinus). In accordance with this, two mtDNA samples from the park have been placed in the same mtDNA clade as the northern chacma baboons. However, GNP baboons exhibit morphological features common in yellow baboons (e.g., yellow fur color), suggesting that parapatric gene flow between chacma and yellow baboons might have occurred in the past or could be ongoing. We investigated the phenostructure of the Gorongosa baboons using two approaches: 1) description of external phenotypic features, such as coloration and body size, and 2) 3D geometric morphometric analysis of 43 craniofacial landmarks on 11 specimens from Gorongosa compared to a pan-African sample of 352 baboons. The results show that Gorongosa baboons exhibit a mosaic of features shared with southern P. cynocephalus and P. ursinus griseipes. The GNP baboon phenotype fits within a geographic clinal pattern of replacing allotaxa. We put forward the hypothesis of either past and/or ongoing hybridization between the gray-footed chacma and southern yellow baboons in Gorongosa or an isolation-by-distance scenario in which the GNP baboons are geographically and morphologically intermediate. These two scenarios are not mutually exclusive. We highlight the potential of baboons as a useful model to understand speciation and hybridization in early human evolution.
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Affiliation(s)
- Felipe I Martinez
- Pontificia Universidad Católica de Chile, Facultad de Ciencias Sociales, Programa de Antropología, Av. Vicuña Mackenna 4860, Macul, Santiago 7820436, Chile.
| | | | - Maria J Ferreira da Silva
- Organisms and Environment Division, School of Biosciences, Cardiff University, Biomedical Sciences Building, Room C/5.15, Museum Avenue, Cardiff CF10 3AX, Wales, UK; CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Portugal
| | - Vera Aldeias
- ICArEHB - Interdisciplinary Center for Archaeology and Evolution of Human Behaviour, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal; Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | | | - William Archer
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany; Department of Archaeology, University of Cape Town, Cape Town, South Africa
| | - Marion Bamford
- Evolutionary Studies Institute, University of the Witwatersrand, South Africa
| | - Dora Biro
- Department of Zoology, University of Oxford, UK
| | - René Bobe
- ICArEHB - Interdisciplinary Center for Archaeology and Evolution of Human Behaviour, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal; Primate Models for Behavioural Evolution Lab, Institute of Cognitive and Evolutionary Anthropology, School of Anthropology and Museum Ethnography, University of Oxford, UK; Gorongosa National Park, Sofala, Mozambique
| | - David R Braun
- Center for the Advanced Study of Human Paleobiology, George Washington University, 800 22nd Street NW, Washington DC 20052, USA
| | - Jörg M Habermann
- ICArEHB - Interdisciplinary Center for Archaeology and Evolution of Human Behaviour, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal; Primate Models for Behavioural Evolution Lab, Institute of Cognitive and Evolutionary Anthropology, School of Anthropology and Museum Ethnography, University of Oxford, UK; GeoZentrumNordbayern, Friedrich-Alexander-Universität Erlangen-Nürnberg, Germany
| | - Tina Lüdecke
- Primate Models for Behavioural Evolution Lab, Institute of Cognitive and Evolutionary Anthropology, School of Anthropology and Museum Ethnography, University of Oxford, UK; Senckenberg Biodiversity and Climate Research Centre, Germany
| | | | | | - Enquye Negash
- Center for the Advanced Study of Human Paleobiology, George Washington University, 800 22nd Street NW, Washington DC 20052, USA
| | - Luis M Paulo
- AESDA - Associação de Estudos Subterrâneos e Defesado Ambiente, Portugal
| | - Maria Pinto
- AESDA - Associação de Estudos Subterrâneos e Defesado Ambiente, Portugal
| | | | - Frederico Tátá
- ICArEHB - Interdisciplinary Center for Archaeology and Evolution of Human Behaviour, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal; AESDA - Associação de Estudos Subterrâneos e Defesado Ambiente, Portugal
| | - Susana Carvalho
- ICArEHB - Interdisciplinary Center for Archaeology and Evolution of Human Behaviour, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal; Primate Models for Behavioural Evolution Lab, Institute of Cognitive and Evolutionary Anthropology, School of Anthropology and Museum Ethnography, University of Oxford, UK; Gorongosa National Park, Sofala, Mozambique; Centre for Functional Ecology, Coimbra University, Portugal
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15
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Bonnell TR, Henzi SP, Barrett L. Functional social structure in baboons: Modeling interactions between social and environmental structure in group-level foraging. J Hum Evol 2019; 126:14-23. [DOI: 10.1016/j.jhevol.2018.10.011] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2018] [Revised: 10/28/2018] [Accepted: 10/29/2018] [Indexed: 10/27/2022]
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16
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Baboon vocal repertoires and the evolution of primate vocal diversity. J Hum Evol 2018; 126:1-13. [PMID: 30583838 DOI: 10.1016/j.jhevol.2018.10.010] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Revised: 10/18/2018] [Accepted: 10/25/2018] [Indexed: 11/23/2022]
Abstract
A remarkable and derived trait of humans is the faculty for language, and considerable research effort has been devoted to understanding the evolution of speech. In contrast to spoken language, which constitutes a (learned) symbolic communication system, the acoustic structure of nonhuman primate vocalizations is largely genetically fixed. Yet, appreciable differences between different genera and species may exist. Environmental conditions, sexual selection, and characteristics of the social system have been invoked to explain these differences. Here, we studied the acoustic variation of call types and vocal repertoires in the genus Papio. Because the genus comprises both stable groups as well as multi-level societies, and reveals striking variation in the degree of aggressiveness from south to north, it constitutes a promising model to assess the link between social system characteristics and vocal communication. We found that, the vocal repertoires of the different species were composed of the same general call types. A quantitative analysis of the acoustic features of the grunts and loud calls of chacma (Papio ursinus), olive (P. anubis), and Guinea (P. papio) baboons showed subtle acoustic differences within call types, however. Social system characteristics did not map onto acoustic variation. We found no correlation between the structure of grunts and geographic distance; the same was true for female loud calls. Only for male loud calls from three populations, call structure varied with geographic distance. Our findings corroborate the view that the structure of nonhuman primate vocalizations is highly conserved, despite the differences in social systems. Apparently, variation in rate and intensity of occurrence of signals, probably due to different behavioral dispositions in species, are sufficient to allow for plasticity at the level of the social relationships, mating patterns, and social organization.
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17
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Matsudaira K, Ishida T, Malaivijitnond S, Reichard UH. Short dispersal distance of males in a wild white-handed gibbon (Hylobates lar
) population. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2018; 167:61-71. [DOI: 10.1002/ajpa.23603] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2017] [Revised: 04/14/2018] [Accepted: 04/16/2018] [Indexed: 11/06/2022]
Affiliation(s)
- Kazunari Matsudaira
- Unit of Human Biology and Genetics, Department of Biological Sciences, Graduate School of Science; The University of Tokyo; Tokyo Japan
- Department of Biology, Faculty of Science; Chulalongkorn University; Bangkok Thailand
| | - Takafumi Ishida
- Unit of Human Biology and Genetics, Department of Biological Sciences, Graduate School of Science; The University of Tokyo; Tokyo Japan
| | - Suchinda Malaivijitnond
- Department of Biology, Faculty of Science; Chulalongkorn University; Bangkok Thailand
- National Primate Research Center of Thailand, Chulalongkorn University; Saraburi Thailand
| | - Ulrich H. Reichard
- Department of Anthropology and Center for Ecology; Southern Illinois University Carbondale; Carbondale Illinois
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18
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Ferreira da Silva MJ, Kopp GH, Casanova C, Godinho R, Minhós T, Sá R, Zinner D, Bruford MW. Disrupted dispersal and its genetic consequences: Comparing protected and threatened baboon populations (Papio papio) in West Africa. PLoS One 2018; 13:e0194189. [PMID: 29614097 PMCID: PMC5882123 DOI: 10.1371/journal.pone.0194189] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2016] [Accepted: 02/27/2018] [Indexed: 12/04/2022] Open
Abstract
Dispersal is a demographic process that can potentially counterbalance the negative impacts of anthropogenic habitat fragmentation. However, mechanisms of dispersal may become modified in populations living in human-dominated habitats. Here, we investigated dispersal in Guinea baboons (Papio papio) in areas with contrasting levels of anthropogenic fragmentation, as a case study. Using molecular data, we compared the direction and extent of sex-biased gene flow in two baboon populations: from Guinea-Bissau (GB, fragmented distribution, human-dominated habitat) and Senegal (SEN, continuous distribution, protected area). Individual-based Bayesian clustering, spatial autocorrelation, assignment tests and migrant identification suggested female-mediated gene flow at a large spatial scale for GB with evidence of contact between genetically differentiated males at one locality, which could be interpreted as male-mediated gene flow in southern GB. Gene flow was also found to be female-biased in SEN for a smaller scale. However, in the southwest coastal part of GB, at the same geographic scale as SEN, no sex-biased dispersal was detected and a modest or recent restriction in GB female dispersal seems to have occurred. This population-specific variation in dispersal is attributed to behavioural responses to human activity in GB. Our study highlights the importance of considering the genetic consequences of disrupted dispersal patterns as an additional impact of anthropogenic habitat fragmentation and is potentially relevant to the conservation of many species inhabiting human-dominated environments.
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Affiliation(s)
- Maria Joana Ferreira da Silva
- Organisms and Environment Division, School of Biosciences, Cardiff University, Cardiff, Wales, United Kingdom
- CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus Agrário de Vairão, Vairão, Portugal
- CAPP, School of Social and Political Sciences, University of Lisbon, Rua Almerindo Lessa, Lisboa, Portugal
- * E-mail:
| | - Gisela H. Kopp
- Cognitive Ethology Laboratory, German Primate Center, Göttingen, Germany
| | - Catarina Casanova
- CAPP, School of Social and Political Sciences, University of Lisbon, Rua Almerindo Lessa, Lisboa, Portugal
| | - Raquel Godinho
- CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus Agrário de Vairão, Vairão, Portugal
- Departamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, Porto, Portugal
- Department of Zoology, Faculty of Sciences, University of Johannesburg, Auckland Park, South Africa
| | - Tânia Minhós
- Departamento de Antropologia, Faculdade de Ciências Sociais e Humanas, Universidade Nova de Lisboa, Lisboa, Portugal
- Centre for Research in Anthropology (CRIA), Instituto Universitário de Lisboa, Lisboa, Portugal
- IGC, Instituto Gulbenkian de Ciência, Rua da Quinta Grande, Oeiras, Portugal
| | - Rui Sá
- Departamento de Ciências Ambientais, Universidade Lusófona da Guiné, Rua Vitorino Costa, Bissau, Guiné-Bissau
- Research Centre for Anthropology and Health, Universidade de Coimbra, Calçada Martim de Freitas, Coimbra, Portugal
| | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center, Göttingen, Germany
| | - Michael W. Bruford
- Organisms and Environment Division, School of Biosciences, Cardiff University, Cardiff, Wales, United Kingdom
- Sustainable Places Research Institute, Cardiff University, Cardiff, Wales, United Kingdom
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Lynch EC, Di Fiore A, Lynch RF, Palombit RA. Fathers enhance social bonds among paternal half-siblings in immature olive baboons (Papio hamadryas anubis). Behav Ecol Sociobiol 2017. [DOI: 10.1007/s00265-017-2336-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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20
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Walker JA, Jordan VE, Steely CJ, Beckstrom TO, McDaniel CL, St. Romain CP, Bennett EC, Robichaux A, Clement BN, Konkel MK, Batzer MA. Papio Baboon Species Indicative Alu Elements. Genome Biol Evol 2017; 9:1788-1796. [PMID: 28854642 PMCID: PMC5569700 DOI: 10.1093/gbe/evx130] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/11/2017] [Indexed: 11/25/2022] Open
Abstract
The genus of Papio (baboon) has six recognized species separated into Northern and Southern clades, each comprised of three species distributed across the African continent. Geographic origin and phenotypic variants such as coat color and body size have commonly been used to identify different species. The existence of multiple hybrid zones, both ancient and current, have complicated efforts to characterize the phylogeny of Papio baboons. More recently, mitochondrial DNA (mtDNA) and Y-chromosome genetic markers have been utilized for species identification with particular focus on the hybrid zones. Alu elements accumulate in a random manner and are a novel source of identical by descent variation with known ancestral states for inferring population genetic and phylogenetic relationships. As part of the Baboon Genome Analysis Consortium, we assembled an Alu insertion polymorphism database of nearly 500 Papio-lineage specific insertions representing all six species and performed population structure and phylogenetic analyses. In this study, we have selected a subset of 48 species indicative Alu insertions and demonstrate their utility as genetic systems for the identification of baboon species within Papio. Individual elements from the panel are easy to genotype and can be used in a hierarchical fashion based on the original level of uncertainty. This Alu-48 panel should serve as a valuable tool during the maintenance of pedigree records in captive populations and assist in the forensic identification of fossils and potential hybrids in the wild.
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Affiliation(s)
| | | | - Cody J. Steely
- Department of Biological Sciences, Louisiana State University
| | | | | | | | | | - Arianna Robichaux
- Department of Biological Sciences, Louisiana State University
- Department of Biological and Physical Sciences, Northwestern State University of Louisiana
| | - Brooke N. Clement
- Department of Biological Sciences, Louisiana State University
- School of Veterinary Medicine, Louisiana State University
| | | | | | - Mark A. Batzer
- Department of Biological Sciences, Louisiana State University
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Morinha F, Dávila JA, Bastos E, Cabral JA, Frías Ó, González JL, Travassos P, Carvalho D, Milá B, Blanco G. Extreme genetic structure in a social bird species despite high dispersal capacity. Mol Ecol 2017; 26:2812-2825. [PMID: 28222237 DOI: 10.1111/mec.14069] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2016] [Revised: 02/08/2017] [Accepted: 02/09/2017] [Indexed: 01/01/2023]
Abstract
Social barriers have been shown to reduce gene flow and contribute to genetic structure among populations in species with high cognitive capacity and complex societies, such as cetaceans, apes and humans. In birds, high dispersal capacity is thought to prevent population divergence unless major geographical or habitat barriers induce isolation patterns by dispersal, colonization or adaptation limitation. We report that Iberian populations of the red-billed chough, a social, gregarious corvid with high dispersal capacity, show a striking degree of genetic structure composed of at least 15 distinct genetic units. Monitoring of marked individuals over 30 years revealed that long-distance movements over hundreds of kilometres are common, yet recruitment into breeding populations is infrequent and highly philopatric. Genetic differentiation is weakly related to geographical distance, and habitat types used are overall qualitatively similar among regions and regularly shared by individuals of different populations, so that genetic structure is unlikely to be due solely to isolation by distance or isolation by adaptation. Moreover, most population nuclei showed relatively high levels of genetic diversity, suggesting a limited role for genetic drift in significantly differentiating populations. We propose that social mechanisms may underlie this unprecedented level of genetic structure in birds through a pattern of isolation by social barriers not yet described, which may have driven this remarkable population divergence in the absence of geographical and environmental barriers.
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Affiliation(s)
- Francisco Morinha
- Laboratory of Applied Ecology, Centre for Research and Technology of Agro-Environment and Biological Sciences (CITAB), University of Trás-os-Montes and Alto Douro (UTAD), Quinta de Prados, 5000-801, Vila Real, Portugal.,Morinha Lab - Laboratory of Biodiversity and Molecular Genetics, Rua Dr. José Figueiredo, lote L-2, Lj B5, 5000-562, Vila Real, Portugal
| | - José A Dávila
- Instituto de Investigación en Recursos Cinegéticos, IREC (CSIC, UCLM, JCCM), Ciudad Real, Spain
| | - Estela Bastos
- Laboratory of Applied Ecology, Centre for Research and Technology of Agro-Environment and Biological Sciences (CITAB), University of Trás-os-Montes and Alto Douro (UTAD), Quinta de Prados, 5000-801, Vila Real, Portugal.,Department of Genetics and Biotechnology, School of Life and Environmental Sciences, University of Trás-os-Montes and Alto Douro (UTAD), Quinta de Prados, 5000-801, Vila Real, Portugal
| | - João A Cabral
- Laboratory of Applied Ecology, Centre for Research and Technology of Agro-Environment and Biological Sciences (CITAB), University of Trás-os-Montes and Alto Douro (UTAD), Quinta de Prados, 5000-801, Vila Real, Portugal
| | - Óscar Frías
- National Museum of Natural Sciences (MNCN), Spanish National Research Council (CSIC), Madrid, 28006, Spain
| | - José L González
- National Museum of Natural Sciences (MNCN), Spanish National Research Council (CSIC), Madrid, 28006, Spain
| | - Paulo Travassos
- Laboratory of Applied Ecology, Centre for Research and Technology of Agro-Environment and Biological Sciences (CITAB), University of Trás-os-Montes and Alto Douro (UTAD), Quinta de Prados, 5000-801, Vila Real, Portugal
| | - Diogo Carvalho
- Laboratory of Applied Ecology, Centre for Research and Technology of Agro-Environment and Biological Sciences (CITAB), University of Trás-os-Montes and Alto Douro (UTAD), Quinta de Prados, 5000-801, Vila Real, Portugal
| | - Borja Milá
- National Museum of Natural Sciences (MNCN), Spanish National Research Council (CSIC), Madrid, 28006, Spain
| | - Guillermo Blanco
- National Museum of Natural Sciences (MNCN), Spanish National Research Council (CSIC), Madrid, 28006, Spain
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Fischer J, Kopp GH, Dal Pesco F, Goffe A, Hammerschmidt K, Kalbitzer U, Klapproth M, Maciej P, Ndao I, Patzelt A, Zinner D. Charting the neglected West: The social system of Guinea baboons. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2017; 162 Suppl 63:15-31. [PMID: 28105722 PMCID: PMC6586040 DOI: 10.1002/ajpa.23144] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/11/2016] [Revised: 10/18/2016] [Accepted: 10/21/2016] [Indexed: 11/22/2022]
Abstract
OBJECTIVES Primate social systems are remarkably diverse, and thus play a central role in understanding social evolution, including the biological origin of human societies. Although baboons have been prominently featured in this context, historically little was known about the westernmost member of the genus, the Guinea baboon (Papio papio). MATERIAL AND METHODS Here, we summarize the findings from the first years of observations at the field site CRP Simenti in the Niokolo Koba National Park in Senegal. RESULTS Guinea baboons reveal a nested multi-level social organization, with reproductive units comprising one "primary" male, one to several females, young, and occasionally "secondary" males at the base of the society. Three to five units form "parties," which team up with other parties to form a "gang." Different gangs have largely overlapping home ranges and agonistic interactions between different parties or gangs are rare. Some but not all strongly socially bonded males are highly related, and population genetic and behavioral evidence indicate female-biased dispersal. Females play an important role in intersexual bond formation and maintenance, and female tenure length varies between a few weeks to several years. DISCUSSION While the social organization resembles that of hamadryas baboons (P. hamadryas), the social structure differs considerably, specifically in terms of low male aggressiveness and female freedom. Despite substantial differences in social organization and social structure, the acoustic structure of Guinea baboon vocalizations does not differ substantially from that of other baboon taxa. With its multi-level organization, stable bonds between males and females, as well as a high-degree of male-male cooperation and tolerance, Guinea baboons constitute an intriguing model for reconstructing human social evolution.
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Affiliation(s)
- Julia Fischer
- Cognitive Ethology LaboratoryGerman Primate CenterGöttingenGermany
| | - Gisela H. Kopp
- Cognitive Ethology LaboratoryGerman Primate CenterGöttingenGermany
- Department of BiologyUniversity of KonstanzKonstanzGermany
- Department of Migration and Immuno‐EcologyMax‐Planck‐Institute for OrnithologyRadolfzellGermany
| | | | - Adeelia Goffe
- Cognitive Ethology LaboratoryGerman Primate CenterGöttingenGermany
| | | | - Urs Kalbitzer
- Cognitive Ethology LaboratoryGerman Primate CenterGöttingenGermany
- Department of Anthropology and ArchaeologyUniversity of CalgaryCalgaryCanada
| | | | - Peter Maciej
- Cognitive Ethology LaboratoryGerman Primate CenterGöttingenGermany
| | - Ibrahima Ndao
- Direction de Park National de Niokolo KobaTambacoundaSenegal
| | - Annika Patzelt
- Cognitive Ethology LaboratoryGerman Primate CenterGöttingenGermany
| | - Dietmar Zinner
- Cognitive Ethology LaboratoryGerman Primate CenterGöttingenGermany
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Farine DR, Strandburg-Peshkin A, Berger-Wolf T, Ziebart B, Brugere I, Li J, Crofoot MC. Both Nearest Neighbours and Long-term Affiliates Predict Individual Locations During Collective Movement in Wild Baboons. Sci Rep 2016; 6:27704. [PMID: 27292778 PMCID: PMC4904494 DOI: 10.1038/srep27704] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2016] [Accepted: 05/24/2016] [Indexed: 12/21/2022] Open
Abstract
In many animal societies, groups of individuals form stable social units that are shaped by well-delineated dominance hierarchies and a range of affiliative relationships. How do socially complex groups maintain cohesion and achieve collective movement? Using high-resolution GPS tracking of members of a wild baboon troop, we test whether collective movement in stable social groups is governed by interactions among local neighbours (commonly found in groups with largely anonymous memberships), social affiliates, and/or by individuals paying attention to global group structure. We construct candidate movement prediction models and evaluate their ability to predict the future trajectory of focal individuals. We find that baboon movements are best predicted by 4 to 6 neighbours. While these are generally individuals’ nearest neighbours, we find that baboons have distinct preferences for particular neighbours, and that these social affiliates best predict individual location at longer time scales (>10 minutes). Our results support existing theoretical and empirical studies highlighting the importance of local rules in driving collective outcomes, such as collective departures, in primates. We extend previous studies by elucidating the rules that maintain cohesion in baboons ‘on the move’, as well as the different temporal scales of social interactions that are at play.
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Affiliation(s)
- Damien R Farine
- Department of Anthropology, University of California Davis, 1 Shields Avenue, Davis CA, USA.,Smithsonian Tropical Research Institute, Balboa, Panama.,Edward Grey Institute of Field Ornithology, Department of Zoology, University of Oxford, South Parks Road, Oxford, UK.,Department of Collective Behaviour, Max Planck Institute for Ornithology, Konstanz, 78457, Germany.,Department of Biology, University of Konstanz, 78457, Germany
| | - Ariana Strandburg-Peshkin
- Department of Ecology and Evolutionary Biology, Princeton University, 106A Guyot Hall, Princeton, NJ, USA
| | - Tanya Berger-Wolf
- Department of Computer Science, University of Illinois at Chicago, 851 South Morgan St, Chicago IL, USA
| | - Brian Ziebart
- Department of Computer Science, University of Illinois at Chicago, 851 South Morgan St, Chicago IL, USA
| | - Ivan Brugere
- Department of Computer Science, University of Illinois at Chicago, 851 South Morgan St, Chicago IL, USA
| | - Jia Li
- Department of Computer Science, University of Illinois at Chicago, 851 South Morgan St, Chicago IL, USA
| | - Margaret C Crofoot
- Department of Anthropology, University of California Davis, 1 Shields Avenue, Davis CA, USA.,Smithsonian Tropical Research Institute, Balboa, Panama.,Animal Behaviour Graduate Group, University of California Davis, 1 Shields Avenue, Davis CA, USA
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24
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Kalbitzer U, Roos C, Kopp GH, Butynski TM, Knauf S, Zinner D, Fischer J. Insights into the genetic foundation of aggression in Papio and the evolution of two length-polymorphisms in the promoter regions of serotonin-related genes (5-HTTLPR and MAOALPR) in Papionini. BMC Evol Biol 2016; 16:121. [PMID: 27287312 PMCID: PMC4901440 DOI: 10.1186/s12862-016-0693-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2016] [Accepted: 05/25/2016] [Indexed: 02/04/2023] Open
Abstract
BACKGROUND Aggressive behaviors are an integral part of competitive interactions. There is considerable variation in aggressiveness among individuals both within and among species. Aggressiveness is a quantitative trait that is highly heritable. In modern humans and macaques (Macaca spp.), variation in aggressiveness among individuals is associated with polymorphisms in the serotonergic (5-HT) neurotransmitter system. To further investigate the genetics underlying interspecific variation in aggressiveness, 123 wild individuals from five baboon species (Papio papio, P. hamadryas, P. anubis, P. cynocephalus, and P. ursinus) were screened for two polymorphisms in promoter regions of genes relevant for the 5-HT system (5-HTTLPR and MAOALPR). RESULTS Surprisingly, despite considerable interspecific variation in aggressiveness, baboons are monomorphic in 5-HTTLPR, except for P. hamadryas, which carries one additional allele. Accordingly, this locus cannot be linked to behavioral variation among species. A comparison among 19 papionin species, including nine species of macaques, shows that the most common baboon allele is similar to the one described for Barbary macaques (Macaca sylvanus), probably representing the ancestral allele in this tribe. It should be noted that (almost) all baboons live in Africa, but within Macaca only M. sylvanus lives on this continent. Baboons are, however, highly polymorphic in the so-called 'warrior gene' MAOALPR, carrying three alleles. Due to considerable variation in allele frequencies among populations of the same species, this genotype cannot be invoked to explain variation in aggressiveness at the species level. CONCLUSIONS This study provides another indication that 5-HTTLPR is not related to aggressiveness in primates per se, but may have been under differential selective pressures among taxa and potentially among populations in different geographic regions. The results on MAOALPR alleles in Papio indicate that variation in the metabolism of monoamine neurotransmitters and associated behaviors is more important among populations than among species. We, therefore, propose to compile behavioral data from additional populations of Papio to obtain further insight into the genetics underlying behavioral differences among primate species.
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Affiliation(s)
- Urs Kalbitzer
- Cognitive Ethology Laboratory, German Primate Center (DPZ), Leibniz Institute for Primate Research, Kellnerweg 4, 37077, Göttingen, Germany.
- Department of Anthropology and Archaeology, University of Calgary, 2500 University Dr NW, Calgary, AB, T2N 1N4, Canada.
| | - Christian Roos
- Gene Bank of Primates and Primate Genetics Laboratory, German Primate Center (DPZ), Leibniz Institute for Primate Research, Kellnerweg 4, 37077, Göttingen, Germany
| | - Gisela H Kopp
- Cognitive Ethology Laboratory, German Primate Center (DPZ), Leibniz Institute for Primate Research, Kellnerweg 4, 37077, Göttingen, Germany
- Department of Biology, University of Konstanz, 78457, Constance, Germany
- Department of Migration and Immuno-Ecology, Max Planck Institute for Ornithology, Am Obstberg 1, 78315, Radolfzell, Germany
| | - Thomas M Butynski
- Lolldaiga Hills Research Programme, Sustainability Centre Eastern Africa, P. O. Box 149, Nanyuki, 10400, Kenya
| | - Sascha Knauf
- Work Group Neglected Tropical Diseases, Pathology Unit, German Primate Center (DPZ), Leibniz Institute for Primate Research, Kellnerweg 4, 37077, Göttingen, Germany
| | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center (DPZ), Leibniz Institute for Primate Research, Kellnerweg 4, 37077, Göttingen, Germany
| | - Julia Fischer
- Cognitive Ethology Laboratory, German Primate Center (DPZ), Leibniz Institute for Primate Research, Kellnerweg 4, 37077, Göttingen, Germany
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25
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Goffe AS, Fischer J. Meat sharing between male and female Guinea baboons (<i>Papio papio</i>). Primate Biol 2016. [DOI: 10.5194/pb-3-1-2016] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
Abstract
Abstract. Meat sharing in non-human primates has been linked to a variety of functions, including harassment reduction, mate provisioning and status enhancement. We present observational data regarding male prey capture and male–female meat sharing in wild Guinea baboons. Guinea baboons live in a multilevel society that comprises units of males with associated females and, sometimes, secondary males. Several males of different units maintain strong bonds, resulting in the formation of parties within gangs. Female–male relationships persist irrespective of female reproductive states, yet females may also switch between males at all stages of the reproductive cycle. Our data show that males capture and kill a variety of prey, including hares and antelope. Males shared meat passively only with females in their social and reproductive units. The occurrence of oestrus females in the gang did not influence whether or not sharing would occur in that males did not share with oestrus females unless an affiliative relationship already persisted, indicating that short-term currency exchanges of meat for sex are unlikely. We hypothesise that males may benefit from feeding tolerance by retaining females, while females may increase access to potentially nutritious and rare food sources. Alternatively, females may prefer males that are generally less aggressive and thus also more likely to share meat. Long-term data will be needed to ultimately distinguish between the two accounts. Although there is no evidence that males intentionally provide necessary resources to particular females during times of high energetic demands and decreased foraging efficiency, as has been found in humans, and meat sharing is generally rare, it may have subtle, yet important effects on the maintenance of bonds in Guinea baboons.
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Goffe AS, Zinner D, Fischer J. Sex and friendship in a multilevel society: behavioural patterns and associations between female and male Guinea baboons. Behav Ecol Sociobiol 2016; 70:323-336. [PMID: 26900211 PMCID: PMC4748025 DOI: 10.1007/s00265-015-2050-6] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2015] [Revised: 12/02/2015] [Accepted: 12/07/2015] [Indexed: 11/30/2022]
Abstract
One key question in social evolution is the identification of factors that promote the formation and maintenance of stable bonds between females and males beyond the mating context. Baboons lend themselves to examine this question, as they vary in social organisation and male-female association patterns. We report the results from the first systematic observations of individually identified wild female Guinea baboons. Guinea baboons live in a multilevel society with female-biased dispersal. Although several males could be found within 5 m of females, each female chiefly associated with one "primary" male at the 2 m distance. Social interactions occurred predominantly with the primary male, and female reproductive state had little influence on interaction patterns. The number of females per primary male varied from 1 to 4. During the 17-month study period, half of the females transferred between different males one or multiple times. A subset of females maintained weaker affiliative nonsexual relationships with other "secondary" males. Units composed of primary males with females, and occasional secondary males, apparently form the core of the Guinea baboon society. The social organisation and mating patterns of Guinea and hamadryas baboons may have a common evolutionary origin, despite notable differences in relationship quality. Specifically, Guinea baboon females appear to have greater leverage in their association patterns than hamadryas baboon females. Although we cannot yet explain the lack of overt male control over females, results generally support the notion that phylogenetic descent may play an important role in shaping social systems.
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Affiliation(s)
- Adeelia S. Goffe
- Cognitive Ethology Laboratory, German Primate Center, Kellnerweg 4, 37077 Göttingen, Germany
| | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center, Kellnerweg 4, 37077 Göttingen, Germany
| | - Julia Fischer
- Cognitive Ethology Laboratory, German Primate Center, Kellnerweg 4, 37077 Göttingen, Germany
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Identification of Diagnostic Mitochondrial DNA Single Nucleotide Polymorphisms Specific to Sumatran Orangutan (Pongo abelii) Populations. HAYATI JOURNAL OF BIOSCIENCES 2015. [DOI: 10.1016/j.hjb.2015.09.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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28
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Vale CG, Ferreira da Silva MJ, Campos JC, Torres J, Brito JC. Applying species distribution modelling to the conservation of an ecologically plastic species (Papio papio) across biogeographic regions in West Africa. J Nat Conserv 2015. [DOI: 10.1016/j.jnc.2015.06.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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29
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Kopp GH, Fischer J, Patzelt A, Roos C, Zinner D. Population genetic insights into the social organization of Guinea baboons (Papio papio): Evidence for female-biased dispersal. Am J Primatol 2015; 77:878-89. [PMID: 25864569 PMCID: PMC4654240 DOI: 10.1002/ajp.22415] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2014] [Revised: 03/06/2015] [Accepted: 03/17/2015] [Indexed: 01/23/2023]
Abstract
Sex differences in philopatry and dispersal have important consequences on the genetic structure of populations, social groups, and social relationships within groups. Among mammals, male dispersal and female philopatry are most common and closely related taxa typically exhibit similar dispersal patterns. However, among four well-studied species of baboons, only hamadryas baboons exhibit female dispersal, thus differing from their congenerics, which show female philopatry and close-knit female social relationships. Until recently, knowledge of the Guinea baboon social system and dispersal pattern remained sparse. Previous observations suggested that the high degree of tolerance observed among male Guinea baboons could be due to kinship. This led us to hypothesize that this species exhibits male philopatry and female dispersal, conforming to the hamadryas pattern. We genotyped 165 individuals from five localities in the Niokolo-Koba National Park, Senegal, at 14 autosomal microsatellite loci and sequenced a fragment of the mitochondrial hypervariable region I (HVRI) of 55 individuals. We found evidence for higher population structuring in males than in females, as expected if males are the more philopatric sex. A comparison of relatedness between male-male and female-female dyads within and among communities did not yield conclusive results. HVRI diversity within communities was high and did not differ between the sexes, also suggesting female gene flow. Our study is the first comprehensive analysis of the genetic population structure in Guinea baboons and provides evidence for female-biased dispersal in this species. In conjunction with their multilevel social organization, this finding parallels the observations for human hunter-gatherers and strengthens baboons as an intriguing model to elucidate the processes that shaped the highly cooperative societies of Homo.
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Affiliation(s)
- Gisela H Kopp
- Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate Research, Göttingen, Germany
| | - Julia Fischer
- Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate Research, Göttingen, Germany
| | - Annika Patzelt
- Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate Research, Göttingen, Germany
| | - Christian Roos
- Gene Bank of Primates and Primate Genetics Laboratory, German Primate Center, Leibniz Institute for Primate Research, Göttingen, Germany
| | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate Research, Göttingen, Germany
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Patzelt A, Kopp GH, Ndao I, Kalbitzer U, Zinner D, Fischer J. Male tolerance and male-male bonds in a multilevel primate society. Proc Natl Acad Sci U S A 2014; 111:14740-5. [PMID: 25201960 PMCID: PMC4205614 DOI: 10.1073/pnas.1405811111] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Male relationships in most species of mammals generally are characterized by intense intrasexual competition, with little bonding among unrelated individuals. In contrast, human societies are characterized by high levels of cooperation and strong bonds among both related and unrelated males. The emergence of cooperative male-male relationships has been linked to the multilevel structure of traditional human societies. Based on an analysis of the patterns of spatial and social interaction in combination with genetic relatedness data of wild Guinea baboons (Papio papio), we show that this species exhibits a multilevel social organization in which males maintain strong bonds and are highly tolerant of each other. Several "units" of males with their associated females form "parties," which team up as "gangs." Several gangs of the same "community" use the same home range. Males formed strong bonds predominantly within parties; however, these bonds were not correlated with genetic relatedness. Agonistic interactions were relatively rare and were restricted to a few dyads. Although the social organization of Guinea baboons resembles that of hamadryas baboons, we found stronger male-male affiliation and more elaborate greeting rituals among male Guinea baboons and less aggression toward females. Thus, the social relationships of male Guinea baboons differ markedly from those of other members of the genus, adding valuable comparative data to test hypotheses regarding social evolution. We suggest that this species constitutes an intriguing model to study the predictors and fitness benefits of male bonds, thus contributing to a better understanding of the evolution of this important facet of human social behavior.
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Affiliation(s)
- Annika Patzelt
- Cognitive Ethology Laboratory, German Primate Center, 37077 Göttingen, Germany; Courant Research Centre for the Evolution of Social Behaviour, 37077 Göttingen, Germany
| | - Gisela H Kopp
- Cognitive Ethology Laboratory, German Primate Center, 37077 Göttingen, Germany; Courant Research Centre for the Evolution of Social Behaviour, 37077 Göttingen, Germany; Center of Biodiversity and Sustainable Land Use, University of Göttingen, 37077 Göttingen, Germany; and
| | - Ibrahima Ndao
- Headquarters of the Niokolo Koba National Park, BP 37, Tambacounda, Senegal
| | - Urs Kalbitzer
- Cognitive Ethology Laboratory, German Primate Center, 37077 Göttingen, Germany; Courant Research Centre for the Evolution of Social Behaviour, 37077 Göttingen, Germany
| | - Dietmar Zinner
- Cognitive Ethology Laboratory, German Primate Center, 37077 Göttingen, Germany; Courant Research Centre for the Evolution of Social Behaviour, 37077 Göttingen, Germany
| | - Julia Fischer
- Cognitive Ethology Laboratory, German Primate Center, 37077 Göttingen, Germany; Courant Research Centre for the Evolution of Social Behaviour, 37077 Göttingen, Germany;
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Assessing the impact of hunting pressure on population structure of Guinea baboons (Papio papio) in Guinea-Bissau. CONSERV GENET 2014. [DOI: 10.1007/s10592-014-0621-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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The Genetic Basis of Primate Behavior: Genetics and Genomics in Field-Based Primatology. INT J PRIMATOL 2013; 35:1-10. [PMID: 25013243 DOI: 10.1007/s10764-013-9732-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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