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Chafin TK, Douglas MR, Martin BT, Zbinden ZD, Middaugh CR, Ballard JR, Gray MC, Don White, Douglas ME. Age structuring and spatial heterogeneity in prion protein gene ( PRNP) polymorphism in white-tailed deer. Prion 2021; 14:238-248. [PMID: 33078661 PMCID: PMC7575228 DOI: 10.1080/19336896.2020.1832947] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
Abstract
Chronic-wasting disease (CWD) is a prion-derived fatal neurodegenerative disease that has affected wild cervid populations on a global scale. Susceptibility has been linked unambiguously to several amino acid variants within the prion protein gene (PRNP). Quantifying their distribution across landscapes can provide critical information for agencies attempting to adaptively manage CWD. Here we attempt to further define management implications of PRNP polymorphism by quantifying the contemporary geographic distribution (i.e., phylogeography) of PRNP variants in hunter-harvested white-tailed deer (WTD; Odocoileus virginianus, N = 1433) distributed across Arkansas (USA), including a focal spot for CWD since detection of the disease in February 2016. Of these, PRNP variants associated with the well-characterized 96S non-synonymous substitution showed a significant increase in relative frequency among older CWD-positive cohorts. We interpreted this pattern as reflective of a longer life expectancy for 96S genotypes in a CWD-endemic region, suggesting either decreased probabilities of infection or reduced disease progression. Other variants showing statistical signatures of potential increased susceptibility, however, seemingly reflect an artefact of population structure. We also showed marked heterogeneity across the landscape in the prevalence of ‘reduced susceptibility’ genotypes. This may indicate, in turn, that differences in disease susceptibility among WTD in Arkansas are an innate, population-level characteristic that is detectable through phylogeographic analysis.
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Affiliation(s)
- Tyler K Chafin
- Department of Biological Sciences, University of Arkansas , Fayetteville, AR, USA
| | - Marlis R Douglas
- Department of Biological Sciences, University of Arkansas , Fayetteville, AR, USA
| | - Bradley T Martin
- Department of Biological Sciences, University of Arkansas , Fayetteville, AR, USA
| | - Zachery D Zbinden
- Department of Biological Sciences, University of Arkansas , Fayetteville, AR, USA
| | - Christopher R Middaugh
- Arkansas Game and Fish Commission, Research, Evaluation, and Compliance Division , Little Rock, AR, USA
| | - Jennifer R Ballard
- Arkansas Game and Fish Commission, Research, Evaluation, and Compliance Division , Little Rock, AR, USA
| | - M Cory Gray
- Arkansas Game and Fish Commission, Research, Evaluation, and Compliance Division , Little Rock, AR, USA
| | - Don White
- University of Arkansas Agricultural Experiment Station , Monticello, AR, USA
| | - Michael E Douglas
- Department of Biological Sciences, University of Arkansas , Fayetteville, AR, USA
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Alarcon P, Marco-Jimenez F, Horigan V, Ortiz-Pelaez A, Rajanayagam B, Dryden A, Simmons H, Konold T, Marco C, Charnley J, Spiropoulos J, Cassar C, Adkin A. A review of cleaning and disinfection guidelines and recommendations following an outbreak of classical scrapie. Prev Vet Med 2021; 193:105388. [PMID: 34098231 DOI: 10.1016/j.prevetmed.2021.105388] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 04/27/2021] [Accepted: 05/21/2021] [Indexed: 10/21/2022]
Abstract
Classical scrapie is a prion disease of small ruminants, the infectious agent of which has been shown to be extremely persistent in the environment. Cleaning and disinfection (C&D) after a scrapie outbreak is currently recommended by many governments' veterinary advisors and implemented in most farms affected. Yet, the effectiveness of these procedures remains unclear. The aim of this study was to review existing literature and guidelines regarding farm C&D protocols following classical scrapie outbreaks and assess their effectiveness and the challenges that translation of policy and legislative requirements present at a practical level. A review of the literature was conducted to identify the on-farm C&D protocols used following outbreaks of scrapie, assess those materials with high risk for persistence of the scrapie agent on farms, and review the existing evidence of the effectiveness of recommended C&D protocols. An expert workshop was also organised in Great Britain (GB) to assess: the decision-making process used when implementing C&D protocols on GB farms, the experts' perceptions on the effectiveness of these protocols and changes needed, and their views on potential recommendations for policy and research. Outputs of the literature review revealed that the current recommended protocol for C&D [1 h treatment with sodium hypochlorite containing 20,000 ppm free chlorine or 2 M sodium hydroxide (NaOH)] is based on laboratory experiments. Only four field farm experiments have been conducted, indicating a lack of data on effectiveness of C&D protocols on farms by the re-occurrence of scrapie infection post re-stocking. Recommendations related to the control of outdoor environment, which are difficult and expensive to implement, vary between countries. The expert workshop concluded that there are no practical, cost-effective C&D alternatives to be considered at this time, with control therefore based on C&D only in combination with additional time restrictions on re-stocking and replacement with non-susceptible livestock or more genetically resistant types, where available. Participants agreed that C&D should still be completed on scrapie affected farms, as it is considered to be "good disease practice" and likely to reduce the levels of the prion protein. Participants felt that any additional protocols developed should not be "too prescriptive" (should not be written down in specific policies) because of significant variation in farm types, farm equipment and installations. Under this scenario, control of classical scrapie on farms should be designed with a level of C&D in combination with re-stocking temporal ban and replacement with livestock of limited susceptibility.
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Affiliation(s)
- Pablo Alarcon
- Department of Epidemiological Sciences, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK; Veterinary Epidemiology, Economics and Public Health Group, Department of Pathobiology and Population Sciences, Royal Veterinary College, Hawkshead Lane, North Mymms, Hatfield, Hertfordshire, AL9 7TA, UK.
| | - Francisco Marco-Jimenez
- Department of Epidemiological Sciences, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK; Department of Animal Sciences, Universitat Politècnica de València, C/Camino de vera s/n, Valencia, 46071, Spain
| | - Verity Horigan
- Department of Epidemiological Sciences, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | | | - Brenda Rajanayagam
- Department of Epidemiological Sciences, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | - Aidan Dryden
- APHA, Worcester CSC, County Hall, Spetchley Road, Worcester, WR5 2NP, UK
| | - Hugh Simmons
- Department of Pathology and Animal Sciences, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | - Timm Konold
- Department of Pathology and Animal Sciences, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK.
| | - Carmen Marco
- APHA Advice Services, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | - Judith Charnley
- APHA Foundry House, Carleton Rd, Skipton North Yorks, BD23 2BE, UK
| | - John Spiropoulos
- Department of Pathology and Animal Sciences, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | - Claire Cassar
- Laboratory Services, Animal and Plant Health Agency, Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | - Amie Adkin
- Food Standards Agency, Clive House, 70 Petty France, London, SW1H 9EX, UK
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3
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Alarcon P, Marco-Jimenez F, Arnold M, Wolf A, Rajanayagam B, Stevens KB, Adkin A. Spatio-temporal and risk factor analysis of alleles related to Scrapie resistance in sheep in Great Britain before, during and after a national breeding program. Prev Vet Med 2018; 159:12-21. [PMID: 30314774 DOI: 10.1016/j.prevetmed.2018.08.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2018] [Revised: 07/17/2018] [Accepted: 08/21/2018] [Indexed: 11/17/2022]
Abstract
Certain genotypes of sheep have been identified to increase their susceptibility (the VRQ allele) or resistance (the ARR allele) to classical scrapie. This study's aim was to assess the spatio-temporal pattern of the ARR and VRQ alleles in Great Britain (GB) and to explore the risk factors associated to their presence. Data was collected from the GB scrapie active surveillance program, the sheep and goat inventory survey (GB census survey) and the agricultural survey for the period 2002-2015. Spatio-temporal trends of genotypes were assessed through the use of choropleth maps, spatial cluster and linear regression analyses. Multivariable mixed effect logistic regression analyses were performed to investigate the association between the resistant or susceptible genotypes, and breeds, farm purpose, animal purpose, surveillance stream, country location and herd size. The results show a significant upward trend in the frequency of most resistant ARR alleles (1.15% per year, 95%CI: 0.76-1.53) and significant downward trend of most susceptible VRQ alleles (-0.40% per year; 95%CI: -0.69 to -0.10]. The trend continues after the termination of the national scrapie plan in 2009. Breeds such as Herdwick (OR = 0,26; 95%CI: 0.14-0.46), Shetland (OR = 0.22; 95%CI: 0.13-0.39), Swaledale (OR = 0.58; 95%CI: 0.47-0.73), Scottish blackface (OR = 0.54; 95%CI: 0.41-0.71) and Welsh Montain (OR: 0.59; 95%CI: 0.44-0.79) were identified with lower odds ratios of having the resistant ARR allele, while Beulah speckled face (OR = 1.58; 95%CI: 1.04-2.41), Jacob (OR = 2.91; 95%CI: 1.33-6.40), Lleyn (OR = 2.94; 95%CI: 1.28-6.74) and Suffolk (OR = 2.19; 95%CI: 1.69-2.84) had higher odds ratios of having the ARR allele. Other risk factors associated to presence of ARR allele were finishing farms (OR = 1.15; 95%CI: 1.06-1.24) and farms in Scotland (OR = 0,78; 95%CI: 0.73-0.83) and in Lowland grazing areas (OR = 1.53; 95%CI: 1.39-1.67). Factors associated with presence the VRQ genotype were farms in Scotland (OR = 0,85; 95%CI: 0.77-0.93) and breeds such as Herdwick (OR = 2.2; 95%CI: 1.08-4.97), Shetland (OR = 4.12; 95%CI: 2.20-7.73) and Sweledale (OR = 1.51; 95%CI: 1.10-2.09). For the most resistant genotype, two significant spatial clusters were identified: a high-risk cluster in the south-west of GB (RR = 1.51, p < 0.001) and a low-risk cluster in northern GB (RR = 0.65, p < 0.001). For the most susceptible genotypes, one significant high-risk cluster was identified in Wales (RR = 2.89 and p = 0.013). Surveillance for classical scrapie could be improved with a risk-based approach by focussing on those areas and farm types identified to have higher frequency of VRQ alleles and less frequency of ARR alleles. Scrapie control strategies could focus on developing breeding programs on farms with Shetland, Herdwick and Swaledale breeds.
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Affiliation(s)
- Pablo Alarcon
- Department of Epidemiological Sciences, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK; Veterinary Epidemiology, Economics and Public Health Group, Department of Pathobiology and Population Medicine, Royal Veterinary College, Hawkshead Lane, North Mymms, Hatfield, Hertfordshire, AL9 7TA, UK.
| | - Francisco Marco-Jimenez
- Department of Epidemiological Sciences, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK; Institute for Animal Science and Technology, Universitat Politècnica de València, C/Camino de vera s/n, Valencia, 46071, Spain
| | - Mark Arnold
- Department of Epidemiological Sciences, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | - Alyssa Wolf
- Veterinary Epidemiology, Economics and Public Health Group, Department of Pathobiology and Population Medicine, Royal Veterinary College, Hawkshead Lane, North Mymms, Hatfield, Hertfordshire, AL9 7TA, UK
| | - Brenda Rajanayagam
- Department of Epidemiological Sciences, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
| | - Kim B Stevens
- Veterinary Epidemiology, Economics and Public Health Group, Department of Pathobiology and Population Medicine, Royal Veterinary College, Hawkshead Lane, North Mymms, Hatfield, Hertfordshire, AL9 7TA, UK
| | - Amie Adkin
- Department of Epidemiological Sciences, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, New Haw, Addlestone, Surrey, KT15 3NB, UK
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Antonets KS, Kliver SF, Nizhnikov AA. Exploring Proteins Containing Amyloidogenic Regions in the Proteomes of Bacteria of the Order Rhizobiales. Evol Bioinform Online 2018; 14:1176934318768781. [PMID: 29720870 PMCID: PMC5922492 DOI: 10.1177/1176934318768781] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2017] [Accepted: 02/27/2018] [Indexed: 11/16/2022] Open
Abstract
Amyloids are protein fibrils with a highly ordered spatial structure called cross-β. To date, amyloids were shown to be implicated in a wide range of biological processes, both pathogenic and functional. In bacteria, functional amyloids are involved in forming biofilms, storing toxins, overcoming the surface tension, and other functions. Rhizobiales represent an economically important group of Alphaproteobacteria, various species of which are not only capable of fixing nitrogen in the symbiosis with leguminous plants but also act as the causative agents of infectious diseases in animals and plants. Here, we implemented bioinformatic screening for potentially amyloidogenic proteins in the proteomes of more than 80 species belonging to the order Rhizobiales. Using SARP (Sequence Analysis based on the Ranking of Probabilities) and Waltz bioinformatic algorithms, we identified the biological processes, where potentially amyloidogenic proteins are overrepresented. We detected protein domains and regions associated with amyloidogenic sequences in the proteomes of various Rhizobiales species. We demonstrated that amyloidogenic regions tend to occur in the membrane or extracellular proteins, many of which are involved in pathogenesis-related processes, including adhesion, assembly of flagellum, and transport of siderophores and lipopolysaccharides, and contain domains typical of the virulence factors (hemolysin, RTX, YadA, LptD); some of them (rhizobiocins, LptD) are also related to symbiosis.
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Affiliation(s)
- Kirill S Antonets
- Laboratory for Proteomics of Supra-Organismal Systems, All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russian Federation.,Department of Genetics, St. Petersburg State University, St. Petersburg, Russian Federation
| | - Sergey F Kliver
- Laboratory for Proteomics of Supra-Organismal Systems, All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russian Federation.,Department of Genetics, St. Petersburg State University, St. Petersburg, Russian Federation
| | - Anton A Nizhnikov
- Laboratory for Proteomics of Supra-Organismal Systems, All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russian Federation.,Department of Genetics, St. Petersburg State University, St. Petersburg, Russian Federation
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5
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Mejía‐Salazar MF, Waldner CL, Hwang YT, Bollinger TK. Use of environmental sites by mule deer: a proxy for relative risk of chronic wasting disease exposure and transmission. Ecosphere 2018. [DOI: 10.1002/ecs2.2055] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023] Open
Affiliation(s)
- María Fernanda Mejía‐Salazar
- Department of Veterinary Pathology University of Saskatchewan 52 Campus Drive Saskatoon Saskatchewan S7N 5B4 Canada
| | - Cheryl L. Waldner
- Department of Large Animal Clinical Sciences University of Saskatchewan 52 Campus Drive Saskatoon Saskatchewan S7N 5B4 Canada
| | - Yeen Ten Hwang
- Department of Veterinary Pathology University of Saskatchewan 52 Campus Drive Saskatoon Saskatchewan S7N 5B4 Canada
- Fish and Wildlife Branch Saskatchewan Ministry of Environment Regina Saskatchewan S4S 5W6 Canada
| | - Trent K. Bollinger
- Department of Veterinary Pathology University of Saskatchewan 52 Campus Drive Saskatoon Saskatchewan S7N 5B4 Canada
- Canadian Wildlife Health Cooperative (CWHC) 52 Campus Drive Saskatoon Saskatchewan S7N 5B4 Canada
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6
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Antonets KS, Nizhnikov AA. Predicting Amyloidogenic Proteins in the Proteomes of Plants. Int J Mol Sci 2017; 18:ijms18102155. [PMID: 29035294 PMCID: PMC5666836 DOI: 10.3390/ijms18102155] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Revised: 10/12/2017] [Accepted: 10/13/2017] [Indexed: 12/21/2022] Open
Abstract
Amyloids are protein fibrils with characteristic spatial structure. Though amyloids were long perceived to be pathogens that cause dozens of incurable pathologies in humans and mammals, it is currently clear that amyloids also represent a functionally important form of protein structure implicated in a variety of biological processes in organisms ranging from archaea and bacteria to fungi and animals. Despite their social significance, plants remain the most poorly studied group of organisms in the field of amyloid biology. To date, amyloid properties have only been demonstrated in vitro or in heterologous systems for a small number of plant proteins. Here, for the first time, we performed a comprehensive analysis of the distribution of potentially amyloidogenic proteins in the proteomes of approximately 70 species of land plants using the Waltz and SARP (Sequence Analysis based on the Ranking of Probabilities) bioinformatic algorithms. We analyzed more than 2.9 million protein sequences and found that potentially amyloidogenic proteins are abundant in plant proteomes. We found that such proteins are overrepresented among membrane as well as DNA- and RNA-binding proteins of plants. Moreover, seed storage and defense proteins of most plant species are rich in amyloidogenic regions. Taken together, our data demonstrate the diversity of potentially amyloidogenic proteins in plant proteomes and suggest biological processes where formation of amyloids might be functionally important.
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Affiliation(s)
- Kirill S Antonets
- Laboratory for Proteomics of Supra-Organismal Systems, All-Russia Research Institute for Agricultural Microbiology, 196608 Podbelskogo sh., 3, Pushkin, St. Petersburg 196608, Russia.
- Department of Genetics and Biotechnology, St. Petersburg State University, 199034 Universitetskaya nab., 7/9, St. Petersburg 199034, Russia.
| | - Anton A Nizhnikov
- Laboratory for Proteomics of Supra-Organismal Systems, All-Russia Research Institute for Agricultural Microbiology, 196608 Podbelskogo sh., 3, Pushkin, St. Petersburg 196608, Russia.
- Department of Genetics and Biotechnology, St. Petersburg State University, 199034 Universitetskaya nab., 7/9, St. Petersburg 199034, Russia.
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7
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Antonets KS, Nizhnikov AA. Amyloids and prions in plants: Facts and perspectives. Prion 2017; 11:300-312. [PMID: 28960135 PMCID: PMC5639834 DOI: 10.1080/19336896.2017.1377875] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2017] [Revised: 09/02/2017] [Accepted: 09/05/2017] [Indexed: 02/07/2023] Open
Abstract
Amyloids represent protein fibrils that have highly ordered structure with unique physical and chemical properties. Amyloids have long been considered lethal pathogens that cause dozens of incurable diseases in humans and animals. Recent data show that amyloids may not only possess pathogenic properties but are also implicated in the essential biological processes in a variety of prokaryotes and eukaryotes. Functional amyloids have been identified in archaea, bacteria, fungi, and animals, including humans. Plants are one of the most poorly studied groups of organisms in the field of amyloid biology. Although amyloid properties have not been shown under native conditions for any plant protein, studies demonstrating amyloid properties for a set of plant proteins in vitro or in heterologous systems in vivo have been published in recent years. In this review, we systematize the data on the amyloidogenic proteins of plants and their functions and discuss the perspectives of identifying novel amyloids using bioinformatic and proteomic approaches.
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Affiliation(s)
- K. S. Antonets
- All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russian Federation
- Department of Genetics and Biotechnology, St. Petersburg State University, St. Petersburg, Russian Federation
| | - A. A. Nizhnikov
- All-Russia Research Institute for Agricultural Microbiology, St. Petersburg, Russian Federation
- Department of Genetics and Biotechnology, St. Petersburg State University, St. Petersburg, Russian Federation
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8
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Bistaffa E, Rossi M, De Luca CMG, Moda F. Biosafety of Prions. PROGRESS IN MOLECULAR BIOLOGY AND TRANSLATIONAL SCIENCE 2017; 150:455-485. [PMID: 28838674 DOI: 10.1016/bs.pmbts.2017.06.017] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Prions are the infectious agents that cause devastating and untreatable disorders known as Transmissible Spongiform Encephalopathies (TSEs). The pathologic events and the infectious nature of these transmissible agents are not completely understood yet. Due to the difficulties in inactivating prions, working with them requires specific recommendations and precautions. Moreover, with the advent of innovative technologies, such as the Protein Misfolding Cyclic Amplification (PMCA) and the Real Time Quaking-Induced Conversion (RT-QuIC), prions could be amplified in vitro and the infectious features of the amplified products need to be carefully assessed.
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Affiliation(s)
- Edoardo Bistaffa
- IRCCS Foundation Carlo Besta Neurological Institute, Milan, Italy; Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy
| | - Martina Rossi
- Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy
| | - Chiara M G De Luca
- IRCCS Foundation Carlo Besta Neurological Institute, Milan, Italy; Università degli Studi di Pavia, Pavia, Italy
| | - Fabio Moda
- IRCCS Foundation Carlo Besta Neurological Institute, Milan, Italy.
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Ricci A, Allende A, Bolton D, Chemaly M, Davies R, Fernández Escámez PS, Gironés R, Herman L, Koutsoumanis K, Lindqvist R, Nørrung B, Robertson L, Sanaa M, Simmons M, Skandamis P, Snary E, Speybroeck N, Kuile BT, Threlfall J, Wahlström H, Adkin A, De Koeijer A, Ducrot C, Griffin J, Ortiz Pelaez A, Latronico F, Ru G. Bovine spongiform encephalopathy (BSE) cases born after the total feed ban. EFSA J 2017; 15:e04885. [PMID: 32625550 PMCID: PMC7010122 DOI: 10.2903/j.efsa.2017.4885] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Sixty bovine spongiform encephalopathy (BSE) cases of Classical or unknown type (BARB‐60 cases) were born after the date of entry into force of the EU total feed ban on 1 January 2001. The European Commission has requested EFSA to provide a scientific opinion on the most likely origin(s) of these BARB‐60 cases; whether feeding with material contaminated with the BSE agent can be excluded as the origin of any of these cases and, if so, whether there is enough scientific evidence to conclude that such cases had a spontaneous origin. The source of infection cannot be ascertained at the individual level for any BSE case, including these BARB‐60 cases, so uncertainty remains high about the origin of disease in each of these animals, but when compared with other biologically plausible sources of infection (maternal, environmental, genetic, iatrogenic), feed‐borne exposure is the most likely. This exposure was apparently excluded for only one of these BARB‐60 cases. However, there is considerable uncertainty associated with the data collected through the field investigation of these cases, due to a time span of several years between the potential exposure of the animal and the confirmation of disease, recall difficulty, and the general paucity of documented objective evidence available in the farms at the time of the investigation. Thus, feeding with material contaminated with the BSE agent cannot be excluded as the origin of any of the BARB‐60 cases, nor is it possible to definitively attribute feed as the cause of any of the BARB‐60 cases. A case of disease is classified as spontaneous by a process of elimination, excluding all other definable possibilities; with regard to the BARB‐60 cases, it is not possible to conclude that any of them had a spontaneous origin.
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10
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Nichols TA, Fischer JW, Spraker TR, Kong Q, VerCauteren KC. CWD prions remain infectious after passage through the digestive system of coyotes (Canis latrans). Prion 2016; 9:367-75. [PMID: 26636258 PMCID: PMC4964857 DOI: 10.1080/19336896.2015.1086061] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Abstract
Chronic wasting disease (CWD) is a geographically expanding prion disease of wild and captive cervids in North America. Disease can be transmitted directly, animal to animal, or indirectly via the environment. CWD contamination can occur residually in the environment via soil, water, and forage following deposition of bodily fluids such as urine, saliva, and feces, or by the decomposition of carcasses. Recent work has indicated that plants may even take up prions into the stems and leaves. When a carcass or gut pile is present in the environment, a large number of avian and mammalian species visit and consume the carrion. Additionally, predators like coyotes, likely select for disease-compromised cervids. Natural cross-species CWD transmission has not been documented, however, passage of infectious prion material has been observed in the feces of crows. In this study we evaluated the ability of CWD-infected brain material to pass through the gastrointestinal tract of coyotes (Canis latrans) following oral ingestion, and be infectious in a cervidized transgenic mouse model. Results from this study indicate that coyotes can pass infectious prions via their feces for at least 3 days post ingestion, demonstrating that mammalian scavengers could contribute to the translocation and contamination of CWD in the environment.
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Affiliation(s)
- Tracy A Nichols
- a National Wildlife Research Center; United States Department of Agriculture ; Animal and Plant Health Inspection Service; Wildlife Services ; Fort Collins , CO USA
| | - Justin W Fischer
- a National Wildlife Research Center; United States Department of Agriculture ; Animal and Plant Health Inspection Service; Wildlife Services ; Fort Collins , CO USA
| | - Terry R Spraker
- b Colorado State University Diagnostic Laboratory; College of Veterinary Medicine; Colorado State University ; Fort Collins , CO USA.,c Department of Microbiology, Immunology and Pathology ; College of Veterinary Medicine and Biomedical Sciences; Colorado State University Prion Research Center ; Fort Collins , CO USA
| | - Qingzhong Kong
- d National Prion Disease Pathology Surveillance Center; Institute of Pathology; Case Western Reserve University ; Cleveland , OH USA
| | - Kurt C VerCauteren
- a National Wildlife Research Center; United States Department of Agriculture ; Animal and Plant Health Inspection Service; Wildlife Services ; Fort Collins , CO USA
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11
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Walker LC, Schelle J, Jucker M. The Prion-Like Properties of Amyloid-β Assemblies: Implications for Alzheimer's Disease. Cold Spring Harb Perspect Med 2016; 6:cshperspect.a024398. [PMID: 27270558 DOI: 10.1101/cshperspect.a024398] [Citation(s) in RCA: 61] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Since the discovery that prion diseases can be transmitted to experimental animals by inoculation with afflicted brain matter, researchers have speculated that the brains of patients suffering from other neurodegenerative diseases might also harbor causative agents with transmissible properties. Foremost among these disorders is Alzheimer's disease (AD), the most common cause of dementia in the elderly. A growing body of research supports the concept that the pathogenesis of AD is initiated and sustained by the endogenous, seeded misfolding and aggregation of the protein fragment amyloid-β (Aβ). At the molecular level, this mechanism of nucleated protein self-assembly is virtually identical to that of prions consisting of the prion protein (PrP). The formation, propagation, and spread of Aβ seeds within the brain can thus be considered a fundamental feature of AD pathogenesis.
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Affiliation(s)
- Lary C Walker
- Yerkes National Primate Research Center and Department of Neurology, Emory University, Atlanta, Georgia 30322
| | - Juliane Schelle
- Department of Cellular Neurology, Hertie Institute for Clinical Brain Research, University of Tübingen, D-72076 Tübingen, Germany German Center for Neurodegenerative Diseases (DZNE), D-72076 Tübingen, Germany
| | - Mathias Jucker
- Department of Cellular Neurology, Hertie Institute for Clinical Brain Research, University of Tübingen, D-72076 Tübingen, Germany German Center for Neurodegenerative Diseases (DZNE), D-72076 Tübingen, Germany
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Requena JR, Kristensson K, Korth C, Zurzolo C, Simmons M, Aguilar-Calvo P, Aguzzi A, Andreoletti O, Benestad SL, Böhm R, Brown K, Calgua B, del Río JA, Espinosa JC, Girones R, Godsave S, Hoelzle LE, Knittler MR, Kuhn F, Legname G, Laeven P, Mabbott N, Mitrova E, Müller-Schiffmann A, Nuvolone M, Peters PJ, Raeber A, Roth K, Schmitz M, Schroeder B, Sonati T, Stitz L, Taraboulos A, Torres JM, Yan ZX, Zerr I. The Priority position paper: Protecting Europe's food chain from prions. Prion 2016; 10:165-81. [PMID: 27220820 PMCID: PMC4981192 DOI: 10.1080/19336896.2016.1175801] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2016] [Revised: 03/28/2016] [Accepted: 04/01/2016] [Indexed: 01/09/2023] Open
Abstract
Bovine spongiform encephalopathy (BSE) created a global European crisis in the 1980s and 90s, with very serious health and economic implications. Classical BSE now appears to be under control, to a great extent as a result of a global research effort that identified the sources of prions in meat and bone meal (MBM) and developed new animal-testing tools that guided policy. Priority ( www.prionpriority.eu ) was a European Union (EU) Framework Program 7 (FP7)-funded project through which 21 European research institutions and small and medium enterprises (SMEs) joined efforts between 2009 and 2014, to conduct coordinated basic and applied research on prions and prion diseases. At the end of the project, the Priority consortium drafted a position paper ( www.prionpriority.eu/Priority position paper) with its main conclusions. In the present opinion paper, we summarize these conclusions. With respect to the issue of re-introducing ruminant protein into the feed-chain, our opinion is that sustaining an absolute ban on feeding ruminant protein to ruminants is essential. In particular, the spread and impact of non-classical forms of scrapie and BSE in ruminants is not fully understood and the risks cannot be estimated. Atypical prion agents will probably continue to represent the dominant form of prion diseases in the near future in Europe. Atypical L-type BSE has clear zoonotic potential, as demonstrated in experimental models. Similarly, there are now data indicating that the atypical scrapie agent can cross various species barriers. More epidemiological data from large cohorts are necessary to reach any conclusion on the impact of its transmissibility on public health. Re-evaluations of safety precautions may become necessary depending on the outcome of these studies. Intensified searching for molecular determinants of the species barrier is recommended, since this barrier is key for important policy areas and risk assessment. Understanding the structural basis for strains and the basis for adaptation of a strain to a new host will require continued fundamental research, also needed to understand mechanisms of prion transmission, replication and how they cause nervous system dysfunction and death. Early detection of prion infection, ideally at a preclinical stage, also remains crucial for development of effective treatment strategies.
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Affiliation(s)
- Jesús R. Requena
- CIMUS Biomedical Research Institute, University of Santiago de Compostela, Santiago de Compostela, Spain
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Sue Godsave
- Netherlands Cancer Institute, Amsterdam, The Netherlands
| | | | | | | | | | - Paul Laeven
- University of Maastricht, Maastricht, The Netherlands
| | | | - Eva Mitrova
- Medical University of Slovakia, Bratislava, Slovakia
| | | | | | - Peter J. Peters
- The Maastricht Multimodal Molecular Imaging Institute, University of Maastricht, Maastricht, The Netherlands
| | | | | | | | | | | | - Lothar Stitz
- Friedrich Löffler Institut, Insel Reims, Germany
| | | | | | | | - Inga Zerr
- Universitätmedizin Göttingen, Göttingen, Germany
- German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany
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13
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Oraby T, Tyshenko MG, Westphal M, Darshan S, Croteau MC, Aspinall W, Elsaadany S, Cashman N, Krewski D. Using expert judgments to improve chronic wasting disease risk management in Canada. JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH. PART A 2016; 79:713-728. [PMID: 27556565 DOI: 10.1080/15287394.2016.1174005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
ABSTARCT Chronic wasting disease (CWD) is a neurodegenerative, protein misfolding disease affecting cervids in North America in epidemic proportions. While the existence of CWD has been known for more than 40 years, risk management efforts to date have not been able to curtail the spread of this condition. An expert elicitation exercise was carried out in May 2011 to obtain the views of international experts on both the etiology of CWD and possible CWD risk management strategies. This study presents the results of the following three components of the elicitation exercise: (1) expert views of the most likely scenarios for the evolution of the CWD among cervid populations in Canada, (2) ranking analyses of the importance of direct and indirect transmission routes, and (3) rating analyses of CWD control measures in farmed and wild cervids. The implications of these findings for the development of CWD risk management strategies are described in a Canadian context.
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Affiliation(s)
- Tamer Oraby
- a Department of Mathematics , University of Texas Rio Grande Valley , Edinburg , Texas , USA
| | - Michael G Tyshenko
- b McLaughlin Centre for Population Health Risk Assessment, Institute of Population Health , University of Ottawa , Ottawa , Ontario , Canada
| | - Margit Westphal
- b McLaughlin Centre for Population Health Risk Assessment, Institute of Population Health , University of Ottawa , Ottawa , Ontario , Canada
| | - Shalu Darshan
- b McLaughlin Centre for Population Health Risk Assessment, Institute of Population Health , University of Ottawa , Ottawa , Ontario , Canada
| | - Maxine C Croteau
- b McLaughlin Centre for Population Health Risk Assessment, Institute of Population Health , University of Ottawa , Ottawa , Ontario , Canada
| | - Willy Aspinall
- c Aspinall and Associates , Tisbury , United Kingdom
- h Risk Sciences International , Ottawa , Ontario , Canada
| | - Susie Elsaadany
- d School of Earth Sciences and Cabot Institute , University of Bristol , Bristol , United Kingdom
| | - Neil Cashman
- e Blood Safety Surveillance and Health Care Acquired Infections Division , Centre for Infectious Disease Prevention and Control, Public Health Agency of Canada , Ottawa , Ontario , Canada
| | - Daniel Krewski
- b McLaughlin Centre for Population Health Risk Assessment, Institute of Population Health , University of Ottawa , Ottawa , Ontario , Canada
- f Brain Research Centre , University of British Columbia , Vancouver , British Columbia , Canada
- g Department of Epidemiology and Community Medicine, Faculty of Medicine , University of Ottawa , Ottawa , Ontario , Canada
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14
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Scientific Opinion on the scrapie situation in the EU after 10 years of monitoring and control in sheep and goats. EFSA J 2014. [DOI: 10.2903/j.efsa.2014.3781] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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15
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Surmacz-Chwedoruk W, Malka I, Bożycki Ł, Nieznańska H, Dzwolak W. On the heat stability of amyloid-based biological activity: insights from thermal degradation of insulin fibrils. PLoS One 2014; 9:e86320. [PMID: 24466022 PMCID: PMC3897677 DOI: 10.1371/journal.pone.0086320] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2013] [Accepted: 12/13/2013] [Indexed: 11/18/2022] Open
Abstract
Formation of amyloid fibrils in vivo has been linked to disorders such as Alzheimer's disease and prion-associated transmissible spongiform encephalopathies. One of the characteristic features of amyloid fibrils is the high thermodynamic stability relative both to native and disordered states which is also thought to underlie the perplexingly remarkable heat resistance of prion infectivity. Here, we are comparing high-temperature degradation of native and fibrillar forms of human insulin. Decomposition of insulin amyloid has been studied under helium atmosphere and in the temperature range from ambient conditions to 750°C using thermogravimetry and differential scanning calorimetry coupled to mass spectrometry. While converting native insulin into amyloid does upshift onset of thermal decomposition by ca. 75°C, fibrils remain vulnerable to covalent degradation at temperatures below 300°C, as reflected by mass spectra of gases released upon heating of amyloid samples, as well as morphology and infrared spectra of fibrils subjected to incubation at 250°C. Mass spectra profiles of released gases indicate that degradation of fibrils is much more cooperative than degradation of native insulin. The data show no evidence of water of crystallization trapped within insulin fibrils. We have also compared untreated and heated amyloid samples in terms of capacity to seed daughter fibrils. Kinetic traces of seed-induced insulin fibrillation have shown that the seeding potency of amyloid samples decreases significantly already after exposure to 200°C, even though corresponding electron micrographs indicated persisting fibrillar morphology. Our results suggest that amyloid-based biological activity may not survive extremely high temperature treatments, at least in the absence of other stabilizing factors.
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Affiliation(s)
- Weronika Surmacz-Chwedoruk
- Institute of Biotechnology and Antibiotics, Warsaw, Poland
- Institute of High Pressure Physics, Polish Academy of Sciences, Warsaw, Poland
| | - Iwona Malka
- Institute of High Pressure Physics, Polish Academy of Sciences, Warsaw, Poland
| | - Łukasz Bożycki
- Institute of High Pressure Physics, Polish Academy of Sciences, Warsaw, Poland
| | - Hanna Nieznańska
- Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland
| | - Wojciech Dzwolak
- Institute of High Pressure Physics, Polish Academy of Sciences, Warsaw, Poland
- Department of Chemistry, University of Warsaw, Warsaw, Poland
- * E-mail:
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16
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Affiliation(s)
- V. Beringue
- UR892 Virologie et Immunologie Moléculaires Centre de Recherche de Jouy-en-Josas F-78352 Jouy-en-Josas, France
| | - O. Andreoletti
- UMR INRA ENVT 1225, Interactions Hôtes Agents Pathogènes, Ecole Nationale Vétérinaire de Toulouse, 23 Chemin des Capelles 31076 Toulouse, France
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17
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Berberidou C, Xanthopoulos K, Paspaltsis I, Lourbopoulos A, Polyzoidou E, Sklaviadis T, Poulios I. Homogenous photocatalytic decontamination of prion infected stainless steel and titanium surfaces. Prion 2013; 7:488-95. [PMID: 24247293 DOI: 10.4161/pri.27180] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Abstract
Prions are notorious for their extraordinary resistance to traditional methods of decontamination, rendering their transmission a public health risk. Iatrogenic Creutzfeldt-Jakob disease (iCJD) via contaminated surgical instruments and medical devices has been verified both experimentally and clinically. Standard methods for prion inactivation by sodium hydroxide or sodium hypochlorite have failed, in some cases, to fully remove prion infectivity, while they are often impractical for routine applications. Prion accumulation in peripheral tissues and indications of human-to-human bloodborne prion transmission, highlight the need for novel, efficient, yet user-friendly methods of prion inactivation. Here we show both in vitro and in vivo that homogenous photocatalytic oxidation, mediated by the photo-Fenton reagent, has the potential to inactivate the pathological prion isoform adsorbed on metal substrates. Photocatalytic oxidation with 224 μg mL(-1) Fe (3+), 500 μg mL(-1) h(-1) H 2O 2, UV-A for 480 min lead to 100% survival in golden Syrian hamsters after intracranial implantation of stainless steel wires infected with the 263K prion strain. Interestingly, photocatalytic treatment of 263K infected titanium wires, under the same experimental conditions, prolonged the survival interval significantly, but failed to eliminate infectivity, a result that we correlate with the increased adsorption of PrP(Sc) on titanium, in comparison to stainless steel. Our findings strongly indicate that our, user--and environmentally--friendly protocol can be safely applied to the decontamination of prion infected stainless steel surfaces.
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Affiliation(s)
- Chrysanthi Berberidou
- Laboratory of Physical Chemistry; Department of Chemistry; Aristotle University of Thessaloniki; Thessaloniki, Greece; Prion Disease Research Group; Laboratory of Pharmacology; School of Pharmacy; Aristotle University of Thessaloniki; Thessaloniki, Greece
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18
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Nichols TA, Spraker TR, Rigg TD, Meyerett-Reid C, Hoover C, Michel B, Bian J, Hoover E, Gidlewski T, Balachandran A, O'Rourke K, Telling GC, Bowen R, Zabel MD, VerCauteren KC. Intranasal inoculation of white-tailed deer (Odocoileus virginianus) with lyophilized chronic wasting disease prion particulate complexed to montmorillonite clay. PLoS One 2013; 8:e62455. [PMID: 23671598 PMCID: PMC3650006 DOI: 10.1371/journal.pone.0062455] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2012] [Accepted: 03/21/2013] [Indexed: 11/19/2022] Open
Abstract
Chronic wasting disease (CWD), the only known prion disease endemic in wildlife, is a persistent problem in both wild and captive North American cervid populations. This disease continues to spread and cases are found in new areas each year. Indirect transmission can occur via the environment and is thought to occur by the oral and/or intranasal route. Oral transmission has been experimentally demonstrated and although intranasal transmission has been postulated, it has not been tested in a natural host until recently. Prions have been shown to adsorb strongly to clay particles and upon oral inoculation the prion/clay combination exhibits increased infectivity in rodent models. Deer and elk undoubtedly and chronically inhale dust particles routinely while living in the landscape while foraging and rutting. We therefore hypothesized that dust represents a viable vehicle for intranasal CWD prion exposure. To test this hypothesis, CWD-positive brain homogenate was mixed with montmorillonite clay (Mte), lyophilized, pulverized and inoculated intranasally into white-tailed deer once a week for 6 weeks. Deer were euthanized at 95, 105, 120 and 175 days post final inoculation and tissues examined for CWD-associated prion proteins by immunohistochemistry. Our results demonstrate that CWD can be efficiently transmitted utilizing Mte particles as a prion carrier and intranasal exposure.
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Affiliation(s)
- Tracy A Nichols
- National Wildlife Research Center, US Department of Agriculture, Animal and Plant Health Inspection Service, Wildlife Services, Fort Collins, Colorado, USA.
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19
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Wyckoff AC, Lockwood KL, Meyerett-Reid C, Michel BA, Bender H, VerCauteren KC, Zabel MD. Estimating prion adsorption capacity of soil by BioAssay of Subtracted Infectivity from Complex Solutions (BASICS). PLoS One 2013; 8:e58630. [PMID: 23484043 PMCID: PMC3587580 DOI: 10.1371/journal.pone.0058630] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2012] [Accepted: 02/05/2013] [Indexed: 11/25/2022] Open
Abstract
Prions, the infectious agent of scrapie, chronic wasting disease and other transmissible spongiform encephalopathies, are misfolded proteins that are highly stable and resistant to degradation. Prions are known to associate with clay and other soil components, enhancing their persistence and surprisingly, transmissibility. Currently, few detection and quantification methods exist for prions in soil, hindering an understanding of prion persistence and infectivity in the environment. Variability in apparent infectious titers of prions when bound to soil has complicated attempts to quantify the binding capacity of soil for prion infectivity. Here, we quantify the prion adsorption capacity of whole, sandy loam soil (SLS) typically found in CWD endemic areas in Colorado; and purified montmorillonite clay (Mte), previously shown to bind prions, by BioAssay of Subtracted Infectivity in Complex Solutions (BASICS). We incubated prion positive 10% brain homogenate from terminally sick mice infected with the Rocky Mountain Lab strain of mouse-adapted prions (RML) with 10% SLS or Mte. After 24 hours samples were centrifuged five minutes at 200×g and soil-free supernatant was intracerebrally inoculated into prion susceptible indicator mice. We used the number of days post inoculation to clinical disease to calculate the infectious titer remaining in the supernatant, which we subtracted from the starting titer to determine the infectious prion binding capacity of SLS and Mte. BASICS indicated SLS bound and removed ≥ 95% of infectivity. Mte bound and removed lethal doses (99.98%) of prions from inocula, effectively preventing disease in the mice. Our data reveal significant prion-binding capacity of soil and the utility of BASICS to estimate prion loads and investigate persistence and decomposition in the environment. Additionally, since Mte successfully rescued the mice from prion disease, Mte might be used for remediation and decontamination protocols.
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Affiliation(s)
- A. Christy Wyckoff
- Department of Microbiology, Immunology and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University Prion Research Center, Fort Collins, Colorado, United States of America
- National Wildlife Research Center, Wildlife Services, United States Department of Agriculture, Fort Collins, Colorado, United States of America
| | - Krista L. Lockwood
- Department of Microbiology, Immunology and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University Prion Research Center, Fort Collins, Colorado, United States of America
| | - Crystal Meyerett-Reid
- Department of Microbiology, Immunology and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University Prion Research Center, Fort Collins, Colorado, United States of America
| | - Brady A. Michel
- Department of Microbiology, Immunology and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University Prion Research Center, Fort Collins, Colorado, United States of America
| | - Heather Bender
- Department of Microbiology, Immunology and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University Prion Research Center, Fort Collins, Colorado, United States of America
| | - Kurt C. VerCauteren
- National Wildlife Research Center, Wildlife Services, United States Department of Agriculture, Fort Collins, Colorado, United States of America
| | - Mark D. Zabel
- Department of Microbiology, Immunology and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University Prion Research Center, Fort Collins, Colorado, United States of America
- * E-mail:
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20
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Ye Z, Bayron Poueymiroy D, Aguilera JJ, Srinivasan S, Wang Y, Serpell LC, Colón W. Inflammation protein SAA2.2 spontaneously forms marginally stable amyloid fibrils at physiological temperature. Biochemistry 2011; 50:9184-91. [PMID: 21942925 DOI: 10.1021/bi200856v] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
For nearly four decades, the formation of amyloid fibrils by the inflammation-related protein serum amyloid A (SAA) has been pathologically linked to the disease amyloid A (AA) amyloidosis. However, here we show that the nonpathogenic murine SAA2.2 spontaneously forms marginally stable amyloid fibrils at 37 °C that exhibit cross-beta structure, binding to thioflavin T, and fibrillation by a nucleation-dependent seeding mechanism. In contrast to the high stability of most known amyloid fibrils to thermal and chemical denaturation, experiments monitored by glutaraldehyde cross-linking/SDS-PAGE, thioflavin T fluorescence, and light scattering (OD(600)) showed that the mature amyloid fibrils of SAA2.2 dissociate upon incubation in >1.0 M urea or >45 °C. When considering the nonpathogenic nature of SAA2.2 and its ~1000-fold increased concentration in plasma during an inflammatory response, its extreme in vitro amyloidogenicity under physiological-like conditions suggest that SAA amyloid might play a functional role during inflammation. Of general significance, the combination of methods used here is convenient for exploring the stability of amyloid fibrils that are sensitive to urea and temperature. Furthermore, our studies imply that analogous to globular proteins, which can possess structures ranging from intrinsically disordered to extremely stable, amyloid fibrils formed in vivo might have a broader range of stabilities than previously appreciated with profound functional and pathological implications.
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Affiliation(s)
- Zhuqiu Ye
- Department of Chemistry and Chemical Biology, and Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York 12180, United States
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21
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Sharp A, Pastor J. Stable limit cycles and the paradox of enrichment in a model of chronic wasting disease. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2011; 21:1024-30. [PMID: 21774409 DOI: 10.1890/10-1449.1] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Prions, which cause chronic wasting disease and other transmissible spongiform encephalopathies in ungulates, can remain active in soils for years. The reproductive age of ungulate populations is well within the residence time of prions in the soil. Reproduction and mortality in disease-free wildlife populations is regulated by density-dependent mechanisms, which also underlie the concept of carrying capacity. Here, we present a model of a susceptible deer population with density-dependent population regulation, an infected population, and an environmental pool of prions that infect the susceptible animals. When carrying capacity is low, the disease does not persist. As carrying capacity increases beyond a critical level, chronic wasting disease then invades a susceptible population and persists. Further increases in carrying capacity beyond a second, higher critical level produce stable limit cycles and recurrent epidemics between the animal population and the disease. This model therefore extends Rosenzweig's paradox of enrichment for predator-prey models to models of diseases in populations. The critical carrying capacities are reached sooner as the residence time of the prion in the soil increases. Wildlife management programs which increase carrying capacity may cause chronic wasting disease to persist and even destabilize animal populations, especially where prions persist for many years.
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Affiliation(s)
- Angela Sharp
- Department of Mathematics and Statistics, University of Minnesota, Duluth, Minnesota 55812, USA
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22
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Scientific Opinion on Risk of transmission of TSEs via semen and embryo transfer in small ruminants (sheep and goats). EFSA J 2010. [DOI: 10.2903/j.efsa.2010.1429] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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23
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Davies P, Brown DR. Manganese enhances prion protein survival in model soils and increases prion infectivity to cells. PLoS One 2009; 4:e7518. [PMID: 19844576 PMCID: PMC2760146 DOI: 10.1371/journal.pone.0007518] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2009] [Accepted: 09/30/2009] [Indexed: 11/18/2022] Open
Abstract
Prion diseases are considered to be transmissible. The existence of sporadic forms of prion diseases such as scrapie implies an environmental source for the infectious agent. This would suggest that under certain conditions the prion protein, the accepted agent of transmission, can survive in the environment. We have developed a novel technique to extract the prion protein from soil matrices. Previous studies have suggested that environmental manganese is a possible risk factor for prion diseases. We have shown that exposure to manganese is a soil matrix causes a dramatic increase in prion protein survival (∼10 fold) over a two year period. We have also shown that manganese increases infectivity of mouse passaged scrapie to culture cells by 2 logs. These results clearly verify that manganese is a risk factor for both the survival of the infectious agent in the environment and its transmissibility.
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Affiliation(s)
- Paul Davies
- Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom
| | - David R. Brown
- Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom
- * E-mail:
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24
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Saunders SE, Bartelt-Hunt SL, Bartz JC. Prions in the environment: occurrence, fate and mitigation. Prion 2008; 2:162-9. [PMID: 19242120 PMCID: PMC2658766 DOI: 10.4161/pri.2.4.7951] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2008] [Accepted: 01/26/2009] [Indexed: 11/19/2022] Open
Abstract
Scrapie and CWD are horizontally transmissible, and the environment likely serves as a stable reservoir of infectious prions, facilitating a sustained incidence of CWD in free-ranging cervid populations and complicating efforts to eliminate disease in captive herds. Prions will enter the environment through mortalities and/or shedding from live hosts. Unfortunately, a sensitive detection method to identify prion contamination in environmental samples has not yet been developed. An environmentally-relevant prion model must be used in experimental studies. Changes in PrP(Sc) structure upon environmental exposure may be as significant as changes in PrP(Sc) quantity, since the structure can directly affect infectivity and disease pathology. Prions strongly bind to soil and remain infectious. Conformational changes upon adsorption, competitive sorption and potential for desorption and transport all warrant further investigation. Mitigation of contaminated carcasses or soil might be accomplished with enzyme treatments or composting in lieu of incineration.
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Affiliation(s)
- Samuel E Saunders
- Department of Civil Engineering, University of Nebraska-Lincoln, Peter Kiewit Institute, Omaha, Nebraska 68182-0178, USA
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