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Yuan L, Zheng Y, Nie L, Zhang L, Wu Y, Zhu S, Hou J, Shan GL, Liu TK, Chen G, Tang X, Wang C. Transcriptional profiling reveals changes in gene regulation and signaling transduction pathways during temperature stress in wucai (Brassica campestris L.). BMC Genomics 2021; 22:687. [PMID: 34551703 PMCID: PMC8456696 DOI: 10.1186/s12864-021-07981-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Accepted: 09/01/2021] [Indexed: 02/07/2023] Open
Abstract
Background Wucai (Brassica campestris L. ssp. chinensis var. rosularis Tsen) is a cold-tolerant plant that is vulnerable to high temperature. This study explored the response mechanism of wucai to low temperature. In this study, wucai seedlings were treated with different temperatures, including low temperature (LT), high temperature (HT), and a control. Results According to transcriptomics analysis, the number of differentially expressed genes (DEGs) in HT and LT was 10,702 and 7267, respectively, compared with the control. The key genes associated with the physiological response of wucai to the treatments were analyzed. The Kyoto Encyclopedia of Genes and Genomes and Gene Ontology annotations indicated the importance of the photosynthesis and photosynthetic-antenna protein pathways. We found that a high-temperature environment greatly inhibited the expression of important genes in the photosynthetic pathway (BrLhc superfamily members, PsaD, PsaE, PsaD, PsaD, PsbO, PsbP, PsbQ, PsbR, PsbS, PsbW, PsbY, Psb27, and Psb28), whereas low temperature resulted in the expression of certain key genes (BrLhc superfamily members, Psa F, Psa H, Psb S, Psb H, Psb 28). In addition, the wucai seedlings exhibited better photosynthetic performance under low-temperature conditions than high-temperature conditions. Conclusions Based on the above results, we speculate that upon exposure to low temperature, the plants developed higher cold tolerance by upregulating the expression of genes related to photosynthesis. Conversely, high-temperature stress inhibited the expression of pivotal genes and weakened the self-regulating ability of the plants. Supplementary Information The online version contains supplementary material available at 10.1186/s12864-021-07981-9.
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Affiliation(s)
- Lingyun Yuan
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China.,Wanjiang Vegetable Industrial Technology Institute, Maanshan, 238200, Anhui, China
| | - Yushan Zheng
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China
| | - Libing Nie
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China
| | - Liting Zhang
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China
| | - Ying Wu
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China
| | - Shidong Zhu
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China.,Wanjiang Vegetable Industrial Technology Institute, Maanshan, 238200, Anhui, China
| | - Jinfeng Hou
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China.,Wanjiang Vegetable Industrial Technology Institute, Maanshan, 238200, Anhui, China
| | - Guo Lei Shan
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China
| | - Tong Kun Liu
- College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Guohu Chen
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China
| | - Xiaoyan Tang
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China.,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China
| | - Chenggang Wang
- College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, Hefei, 230036, Anhui, China. .,Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei, 230036, Anhui, China. .,Wanjiang Vegetable Industrial Technology Institute, Maanshan, 238200, Anhui, China.
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Supramolecular chlorophyll aggregates inspired from specific light-harvesting antenna “chlorosome”: Static nanostructure, dynamic construction process, and versatile application. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C: PHOTOCHEMISTRY REVIEWS 2020. [DOI: 10.1016/j.jphotochemrev.2020.100385] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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3
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Kale R, Sallans L, Frankel LK, Bricker TM. Natively oxidized amino acid residues in the spinach PS I-LHC I supercomplex. PHOTOSYNTHESIS RESEARCH 2020; 143:263-273. [PMID: 31894498 DOI: 10.1007/s11120-019-00698-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2019] [Accepted: 12/05/2019] [Indexed: 06/10/2023]
Abstract
Reactive oxygen species (ROS) production is an unavoidable byproduct of electron transport under aerobic conditions. Photosystem II (PS II), the cytochrome b6/f complex and Photosystem I (PS I) are all demonstrated sources of ROS. It has been proposed that PS I produces substantial levels of a variety of ROS including O2.-, 1O2, H2O2 and, possibly, •OH; however, the site(s) of ROS production within PS I has been the subject of significant debate. We hypothesize that amino acid residues close to the sites of ROS generation will be more susceptible to oxidative modification than distant residues. In this study, we have identified oxidized amino acid residues in spinach PS I which was isolated from field-grown spinach. The modified residues were identified by high-resolution tandem mass spectrometry. As expected, many of the modified residues lie on the surface of the complex. However, a well-defined group of oxidized residues, both buried and surface-exposed, lead from the chl a' of P700 to the surface of PS I. These residues (PsaB: 609F, 611E, 617M, 619W, 620L, and PsaF: 139L, 142A,143D) may identify a preferred route for ROS, probably 1O2, to egress the complex from the vicinity of P700. Additionally, two buried residues located in close proximity to A1B (PsaB:712H and 714S) were modified, which appears consistent with A1B being a source of O2.-. Surprisingly, no oxidatively modified residues were identified in close proximity to the 4Fe-FS clusters FX, FA or FB. These cofactors had been identified as principal targets for ROS damage in the photosystem. Finally, a large number of residues located in the hydrophobic cores of Lhca1-Lhca4 are oxidatively modified. These appear to be the result of 1O2 production by the distal antennae for the photosystem.
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Affiliation(s)
- Ravindra Kale
- Department of Biological Sciences, Biochemistry and Molecular Biology Section, Louisiana State University, Baton Rouge, LA, 70803, USA
| | - Larry Sallans
- The Rieveschl Laboratories for Mass Spectrometry, Department of Chemistry, University of Cincinnati, Cincinnati, OH, 45221, USA
| | - Laurie K Frankel
- Department of Biological Sciences, Biochemistry and Molecular Biology Section, Louisiana State University, Baton Rouge, LA, 70803, USA
| | - Terry M Bricker
- Department of Biological Sciences, Biochemistry and Molecular Biology Section, Louisiana State University, Baton Rouge, LA, 70803, USA.
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4
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Mukazhanova A, Trerayapiwat KJ, Mazaheripour A, Wardrip AG, Frey NC, Nguyen H, Gorodetsky AA, Sharifzadeh S. Accurate First-Principles Calculation of the Vibronic Spectrum of Stacked Perylene Tetracarboxylic Acid Diimides. J Phys Chem A 2020; 124:3055-3063. [DOI: 10.1021/acs.jpca.9b08117] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Aliya Mukazhanova
- Division of Materials Science and Engineering, Boston University, Boston, Massachusetts 02215, United States
| | | | - Amir Mazaheripour
- Department of Materials Science and Engineering, University of California Irvine, Irvine, California 92967, United States
| | - Austin G. Wardrip
- Department of Chemistry, University of California Irvine, Irvine, California 92697, United States
| | - Nathan C. Frey
- Department of Physics, Boston University, Boston, Massachusetts 02215, United States
| | - Hung Nguyen
- Department of Chemical and Biomolecular Engineering, University of California Irvine, Irvine, California 92967, United States
| | - Alon A. Gorodetsky
- Department of Materials Science and Engineering, University of California Irvine, Irvine, California 92967, United States
- Department of Chemical and Biomolecular Engineering, University of California Irvine, Irvine, California 92967, United States
- Department of Chemistry, University of California Irvine, Irvine, California 92697, United States
| | - Sahar Sharifzadeh
- Division of Materials Science and Engineering, Boston University, Boston, Massachusetts 02215, United States
- Department of Chemistry, Boston University, Boston, Massachusetts 02215, United States
- Department of Physics, Boston University, Boston, Massachusetts 02215, United States
- Department of Electrical and Computer Engineering, Boston University, Boston, Massachusetts 02215, United States
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5
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Furukawa R, Aso M, Fujita T, Akimoto S, Tanaka R, Tanaka A, Yokono M, Takabayashi A. Formation of a PSI-PSII megacomplex containing LHCSR and PsbS in the moss Physcomitrella patens. JOURNAL OF PLANT RESEARCH 2019; 132:867-880. [PMID: 31541373 DOI: 10.1007/s10265-019-01138-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Accepted: 09/08/2019] [Indexed: 05/10/2023]
Abstract
Mosses are one of the earliest land plants that diverged from fresh-water green algae. They are considered to have acquired a higher capacity for thermal energy dissipation to cope with dynamically changing solar irradiance by utilizing both the "algal-type" light-harvesting complex stress-related (LHCSR)-dependent and the "plant-type" PsbS-dependent mechanisms. It is hypothesized that the formation of photosystem (PS) I and II megacomplex is another mechanism to protect photosynthetic machinery from strong irradiance. Herein, we describe the analysis of the PSI-PSII megacomplex from the model moss, Physcomitrella patens, which was resolved using large-pore clear-native polyacrylamide gel electrophoresis (lpCN-PAGE). The similarity in the migration distance of the Physcomitrella PSI-PSII megacomplex to the Arabidopsis megacomplex shown during lpCN-PAGE suggested that the Physcomitrella PSI-PSII and Arabidopsis megacomplexes have similar structures. Time-resolved chlorophyll fluorescence measurements show that excitation energy was rapidly and efficiently transferred from PSII to PSI, providing evidence of an ordered association of the two photosystems. We also found that LHCSR and PsbS co-migrated with the Physcomitrella PSI-PSII megacomplex. The megacomplex showed pH-dependent chlorophyll fluorescence quenching, which may have been induced by LHCSR and/or PsbS proteins with the collaboration of zeaxanthin. We discuss the mechanism that regulates the energy distribution balance between two photosystems in Physcomitrella.
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Affiliation(s)
- Ryo Furukawa
- Institute of Low-Temperature Science, Hokkaido University, N19 W8 Kita-ku, Sapporo, 060-0819, Japan
| | - Michiki Aso
- Institute of Low-Temperature Science, Hokkaido University, N19 W8 Kita-ku, Sapporo, 060-0819, Japan
| | - Tomomichi Fujita
- Faculty of Science, Hokkaido University, N10 W8 Kita-ku, Sapporo, 060-0810, Japan
| | - Seiji Akimoto
- Graduate School of Science, Kobe University, Kobe, 657-8501, Japan
| | - Ryouichi Tanaka
- Institute of Low-Temperature Science, Hokkaido University, N19 W8 Kita-ku, Sapporo, 060-0819, Japan
| | - Ayumi Tanaka
- Institute of Low-Temperature Science, Hokkaido University, N19 W8 Kita-ku, Sapporo, 060-0819, Japan
| | - Makio Yokono
- Institute of Low-Temperature Science, Hokkaido University, N19 W8 Kita-ku, Sapporo, 060-0819, Japan.
- Innovation Center, Nippon Flour Mills Co., Ltd., Atsugi, 243-0041, Japan.
| | - Atsushi Takabayashi
- Institute of Low-Temperature Science, Hokkaido University, N19 W8 Kita-ku, Sapporo, 060-0819, Japan
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Boatman TG, Oxborough K, Gledhill M, Lawson T, Geider RJ. An Integrated Response of Trichodesmium erythraeum IMS101 Growth and Photo-Physiology to Iron, CO 2, and Light Intensity. Front Microbiol 2018; 9:624. [PMID: 29755417 PMCID: PMC5932364 DOI: 10.3389/fmicb.2018.00624] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2017] [Accepted: 03/19/2018] [Indexed: 11/13/2022] Open
Abstract
We have assessed how varying CO2 (180, 380, and 720 μatm) and growth light intensity (40 and 400 μmol photons m-2 s-1) affected Trichodesmium erythraeum IMS101 growth and photophysiology over free iron (Fe') concentrations between 20 and 9,600 pM. We found significant iron dependencies of growth rate and the initial slope and maximal relative PSII electron transport rates (rPm). Under iron-limiting concentrations, high-light increased growth rates and rPm; possibly indicating a lower allocation of resources to iron-containing photosynthetic proteins. Higher CO2 increased growth rates across all iron concentrations, enabled growth to occur at lower Fe' concentrations, increased rPm and lowered the iron half saturation constants for growth (Km). We attribute these CO2 responses to the operation of the CCM and the ATP spent/saved for CO2 uptake and transport at low and high CO2, respectively. It seems reasonable to conclude that T. erythraeum IMS101 can exhibit a high degree of phenotypic plasticity in response to CO2, light intensity and iron-limitation. These results are important given predictions of increased dissolved CO2 and water column stratification (i.e., higher light exposures) over the coming decades.
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Affiliation(s)
- Tobias G Boatman
- School of Biological Sciences, University of Essex, Colchester, United Kingdom
| | - Kevin Oxborough
- Chelsea Technologies Group Ltd, West Molesey, United Kingdom
| | - Martha Gledhill
- Ocean and Earth Science, National Oceanography Centre Southampton, University of Southampton, Southampton, United Kingdom.,GEOMAR, Helmholtz Centre for Ocean Research, Kiel, Germany
| | - Tracy Lawson
- School of Biological Sciences, University of Essex, Colchester, United Kingdom
| | - Richard J Geider
- School of Biological Sciences, University of Essex, Colchester, United Kingdom
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7
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Structure and energy transfer pathways of the plant photosystem I-LHCI supercomplex. Curr Opin Struct Biol 2016; 39:46-53. [DOI: 10.1016/j.sbi.2016.04.004] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2016] [Revised: 04/15/2016] [Accepted: 04/18/2016] [Indexed: 11/19/2022]
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8
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Santabarbara S, Bullock B, Rappaport F, Redding KE. Controlling electron transfer between the two cofactor chains of photosystem I by the redox state of one of their components. Biophys J 2016; 108:1537-1547. [PMID: 25809266 DOI: 10.1016/j.bpj.2015.01.009] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2014] [Revised: 12/29/2014] [Accepted: 01/07/2015] [Indexed: 10/23/2022] Open
Abstract
Two functional electron transfer (ET) chains, related by a pseudo-C2 symmetry, are present in the reaction center of photosystem I (PSI). Due to slight differences in the environment around the cofactors of the two branches, there are differences in both the kinetics of ET and the proportion of ET that occurs on the two branches. The strongest evidence that this is indeed the case relied on the observation that the oxidation rates of the reduced phylloquinone (PhQ) cofactor differ by an order of magnitude. Site-directed mutagenesis of residues involved in the respective PhQ-binding sites resulted in a specific alteration of the rates of semiquinone oxidation. Here, we show that the PsaA-F689N mutation results in an ∼100-fold decrease in the observed rate of PhQA(-) oxidation. This is the largest change of PhQA(-) oxidation kinetics observed so far for a single-point mutation, resulting in a lifetime that exceeds that of the terminal electron donor, P700(+). This situation allows a second photochemical charge separation event to be initiated before PhQA(-) has decayed, thereby mimicking in PSI a situation that occurs in type II reaction centers. The results indicate that the presence of PhQA(-) does not impact the overall quantum yield and leads to an almost complete redistribution of the fractional utilization of the two functional ET chains, in favor of the one that does not bear the charged species. The evolutionary implications of these results are also briefly discussed.
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Affiliation(s)
- Stefano Santabarbara
- Department of Chemistry & Biochemistry, Arizona State University, Tempe, Arizona; Institut de Biologie Physico-Chimique, UMR7141 CNRS-UPMC, Paris, France; Istituto di Biofisica, Consiglio Nazionale delle Ricerche, Milano, Italy
| | - Bradford Bullock
- Department of Chemistry, University of Alabama, Tuscaloosa, Alabama
| | - Fabrice Rappaport
- Institut de Biologie Physico-Chimique, UMR7141 CNRS-UPMC, Paris, France.
| | - Kevin E Redding
- Department of Chemistry & Biochemistry, Arizona State University, Tempe, Arizona.
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Slavov C, Reus M, Holzwarth AR. Two different mechanisms cooperate in the desiccation-induced excited state quenching in Parmelia lichen. J Phys Chem B 2013; 117:11326-36. [PMID: 23841476 DOI: 10.1021/jp402881f] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The highly efficient desiccation-induced quenching in the poikilohydric lichen Parmelia sulcata has been studied by ultrafast fluorescence spectroscopy at room temperature (r.t.) and cryogenic temperatures in order to elucidate the quenching mechanism(s) and kinetic reaction models. Analysis of the r.t. data by kinetic target analysis reveals that two different quenching mechanisms contribute to the protection of photosystem II (PS II). The first mechanism is a direct quenching of the PS II antenna and is related to the characteristic F740 nm fluorescence band. Based on the temperature dependence of its spectra and the kinetics, this mechanism is proposed to reflect the formation of a fluorescent (F740) chlorophyll-chlorophyll charge-transfer state. It is discussed in relation to a similar fluorescence band and quenching mechanism observed in light-induced nonphotochemical quenching in higher plants. The second and more efficient quenching process (providing more than 70% of the total PS II quenching) is shown to involve an efficient spillover (energy transfer) from PS II to PS I which can be prevented by a short glutaraldehyde treatment. Desiccation causes a thylakoid-membrane rearrangement which brings into direct contact the PS II and PS I units. The energy transferred to PS I in the spillover process is then quenched highly efficiently in PS I due to the formation of a long-lived P700(+) state in the dried state in the light. As a consequence, both PS II and PS I are protected very efficiently against photodestruction. This dual quenching mechanism is supported by the low temperature kinetics data.
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Affiliation(s)
- Chavdar Slavov
- Max Planck Institute for Chemical Energy Conversion , D-45470 Mülheim a.d. Ruhr, Germany
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10
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Zhang Y, Chen M, Church WB, Lau KW, Larkum AWD, Jermiin LS. The molecular structure of the IsiA–Photosystem I supercomplex, modelled from high-resolution, crystal structures of Photosystem I and the CP43 protein. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2010; 1797:457-65. [PMID: 20064486 DOI: 10.1016/j.bbabio.2010.01.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2009] [Revised: 12/31/2009] [Accepted: 01/05/2010] [Indexed: 11/30/2022]
Affiliation(s)
- Yinan Zhang
- School of Biological Sciences, University of Sydney, Sydney, NSW, Australia
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11
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Passarini F, Wientjes E, van Amerongen H, Croce R. Photosystem I light-harvesting complex Lhca4 adopts multiple conformations: Red forms and excited-state quenching are mutually exclusive. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2010; 1797:501-8. [PMID: 20097154 DOI: 10.1016/j.bbabio.2010.01.015] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2009] [Revised: 01/11/2010] [Accepted: 01/14/2010] [Indexed: 10/19/2022]
Abstract
In this work we have investigated the origin of the multi-exponential fluorescence decay and of the short excited-state lifetime of Lhca4. Lhca4 is the antenna complex of Photosystem I which accommodates the red-most chlorophyll forms and it has been proposed that these chlorophylls can play a role in fluorescence quenching. Here we have compared the fluorescence decay of Lhca4 with that of several Lhca4 mutants that are affected in their red form content. The results show that neither the multi-exponentiality of the decay nor the fluorescence quenching is due to the red forms. The data indicate that Lhca4 exists in multiple conformations. The presence of the red forms, which are very sensitive to changes in the environment, allows to spectrally resolve the different conformations: a "blue" conformation with a short lifetime and a "red" one with a long lifetime. This finding strongly supports the idea that the members of the Lhc family are able to adopt different conformations associated with their light-harvesting and photoprotective roles. The ratio between the conformations is modified by the substitution of lutein by violaxanthin. Finally, it is demonstrated that the red forms cannot be present in the quenched conformation.
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Affiliation(s)
- Francesca Passarini
- Department of Biophysical Chemistry, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands
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12
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13
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Slavov C, El-Mohsnawy E, Rögner M, Holzwarth AR. Trapping kinetics in isolated cyanobacterial PS I complexes. Chem Phys 2009. [DOI: 10.1016/j.chemphys.2008.12.021] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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14
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Stauber EJ, Busch A, Naumann B, Svatoš A, Hippler M. Proteotypic profiling of LHCI from Chlamydomonas reinhardtii provides new insights into structure and function of the complex. Proteomics 2009; 9:398-408. [DOI: 10.1002/pmic.200700620] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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15
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Kern J, Zouni A, Guskov A, Krauß N. Lipids in the Structure of Photosystem I, Photosystem II and the Cytochrome b 6 f Complex. LIPIDS IN PHOTOSYNTHESIS 2009. [DOI: 10.1007/978-90-481-2863-1_10] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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16
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Amunts A, Nelson N. Functional organization of a plant Photosystem I: evolution of a highly efficient photochemical machine. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2008; 46:228-37. [PMID: 18272382 DOI: 10.1016/j.plaphy.2007.12.013] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2007] [Indexed: 05/05/2023]
Abstract
Despite its enormous complexity, a plant Photosystem I (PSI) is arguably the most efficient nano-photochemical machine in Nature. It emerged as a homodimeric structure containing several chlorophyll molecules over 3.5 billion years ago, and has perfected its photoelectric properties ever since. The recently determined structure of plant PSI, which is at the top of the evolutionary tree of this kind of complexes, provided the first relatively high-resolution structural model of the supercomplex containing a reaction center (RC) and a peripheral antenna (LHCI) complexes. The RC is highly homologous to that of the cyanobacterial PSI and maintains the position of most transmembrane helices and chlorophylls during 1.5 years of separate evolution. The LHCI is composed of four nuclear gene products (Lhca1-Lhca4) that are unique among the chlorophyll a/b binding proteins in their pronounced long-wavelength absorbance and their assembly into dimers. In this respect, we describe structural elements, which establish the biological significance of a plant PSI and discuss structural variance from the cyanobacterial version. The present comprehensive structural analysis summarizes our current state of knowledge, providing the first glimpse at the architecture of this highly efficient photochemical machine at the atomic level.
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Affiliation(s)
- Alexey Amunts
- Biochemistry Department, The George S. Wise Faculty of Life Sciences, The Daniella Rich Institute for Structural Biology, Tel Aviv University, Sherman Building, Room 531, Tel Aviv 69978, Israel.
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Abstract
Time-resolved fluorescence measurements were performed on isolated core and intact Photosystem I (PS I) particles and stroma membranes from Arabidopsis thaliana to characterize the type of energy-trapping kinetics in higher plant PS I. Target analysis confirms the previously proposed "charge recombination" model. No bottleneck in the energy flow from the bulk antenna compartments to the reaction center has been found. For both particles a trap-limited kinetics is realized, with an apparent charge separation lifetime of approximately 6 ps. No red chlorophylls (Chls) are found in the PS I-core complex from A. thaliana. Rather, the observed red-shifted fluorescence (700-710 nm range) originates from the reaction center. In contrast, two red Chl compartments, located in the peripheral light-harvesting complexes, are resolved in the intact PS I particles (decay lifetimes 33 and 95 ps, respectively). These two red states have been attributed to the two red states found in Lhca 3 and Lhca 4, respectively. The influence of the red Chls on the slowing of the overall trapping kinetics in the intact PS I complex is estimated to be approximately four times larger than the effect of the bulk antenna enlargement.
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Andrews DL, Bradshaw DS, Leeder JM, Rodríguez J. Dynamics of the dispersion interaction in an energy transfer system. Phys Chem Chem Phys 2008; 10:5250-5. [DOI: 10.1039/b803546f] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Theiss C, Trostmann I, Andree S, Schmitt FJ, Renger T, Eichler HJ, Paulsen H, Renger G. Pigment−Pigment and Pigment−Protein Interactions in Recombinant Water-Soluble Chlorophyll Proteins (WSCP) from Cauliflower. J Phys Chem B 2007; 111:13325-35. [DOI: 10.1021/jp0723968] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- C. Theiss
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
| | - I. Trostmann
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
| | - S. Andree
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
| | - F. J. Schmitt
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
| | - T. Renger
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
| | - H. J. Eichler
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
| | - H. Paulsen
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
| | - G. Renger
- Institute of Optics, Technical University Berlin, Berlin, Germany, Institute of General Botany, Johannes Gutenberg University, Mainz, Germany, Institute of Chemistry, Free University of Berlin, Berlin, Germany, and Max Volmer Laboratory for Biophysical Chemistry, Technical University Berlin, Berlin, Germany
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Jensen PE, Bassi R, Boekema EJ, Dekker JP, Jansson S, Leister D, Robinson C, Scheller HV. Structure, function and regulation of plant photosystem I. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2007; 1767:335-52. [PMID: 17442259 DOI: 10.1016/j.bbabio.2007.03.004] [Citation(s) in RCA: 168] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2007] [Revised: 03/03/2007] [Accepted: 03/06/2007] [Indexed: 12/20/2022]
Abstract
Photosystem I (PSI) is a multisubunit protein complex located in the thylakoid membranes of green plants and algae, where it initiates one of the first steps of solar energy conversion by light-driven electron transport. In this review, we discuss recent progress on several topics related to the functioning of the PSI complex, like the protein composition of the complex in the plant Arabidopsis thaliana, the function of these subunits and the mechanism by which nuclear-encoded subunits can be inserted into or transported through the thylakoid membrane. Furthermore, the structure of the native PSI complex in several oxygenic photosynthetic organisms and the role of the chlorophylls and carotenoids in the antenna complexes in light harvesting and photoprotection are reviewed. The special role of the 'red' chlorophylls (chlorophyll molecules that absorb at longer wavelength than the primary electron donor P700) is assessed. The physiology and mechanism of the association of the major light-harvesting complex of photosystem II (LHCII) with PSI during short term adaptation to changes in light quality and quantity is discussed in functional and structural terms. The mechanism of excitation energy transfer between the chlorophylls and the mechanism of primary charge separation is outlined and discussed. Finally, a number of regulatory processes like acclimatory responses and retrograde signalling is reviewed with respect to function of the thylakoid membrane. We finish this review by shortly discussing the perspectives for future research on PSI.
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Affiliation(s)
- Poul Erik Jensen
- Plant Biochemistry Laboratory, Department of Plant Biology, Faculty of Life Science, University of Copenhagen, DK-1871 Frederiksberg C, Denmark.
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Wilhelm C, Jakob T. Uphill energy transfer from long-wavelength absorbing chlorophylls to PS II in Ostreobium sp. is functional in carbon assimilation. PHOTOSYNTHESIS RESEARCH 2006; 87:323-9. [PMID: 16416051 DOI: 10.1007/s11120-005-9002-3] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2005] [Accepted: 06/16/2005] [Indexed: 05/06/2023]
Abstract
From the algal genus Ostrobium two species are known which express a chlorophyll antenna absorbing between 710 and 725 nm to a different extent. In a comparative study with these two species it is shown that quanta absorbed by this long wavelength antenna can be transferred to PS II leading to significant PS II-related electron transfer. It is documented that under monochromatic far red light illumination growth continues with rather high efficiency. The data show that the uphill-energy transfer to PS II reduces the quantum yield under white light significantly. It is discussed that this strategy of energy conversion might play a role in special environments where far red light is the predominant energy source.
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Affiliation(s)
- Christian Wilhelm
- Biology I / Plant Physiology, University of Leipzig, Johannisallee 21--23, 04103, Leipzig, Germany.
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Adir N, Dines M, Klartag M, McGregor A, Melamed-Frank M. Assembly and Disassembly of Phycobilisomes. MICROBIOLOGY MONOGRAPHS 2006. [DOI: 10.1007/7171_020] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
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Melkozernov AN, Barber J, Blankenship RE. Light Harvesting in Photosystem I Supercomplexes,. Biochemistry 2005; 45:331-45. [PMID: 16401064 DOI: 10.1021/bi051932o] [Citation(s) in RCA: 92] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In photosynthetic membranes of cyanobacteria, algae, and higher plants, photosystem I (PSI) mediates light-driven transmembrane electron transfer from plastocyanin or cytochrome c6 to the ferredoxin-NADP complex. The oxidoreductase function of PSI is sensitized by a reversible photooxidation of primary electron donor P700, which launches a multistep electron transfer via a series of redox cofactors of the reaction center (RC). The excitation energy for the functioning of the primary electron donor in the RC is delivered via the chlorophyll core antenna in the complex with peripheral light-harvesting antennas. Supermolecular complexes of the PSI acquire remarkably different structural forms of the peripheral light-harvesting antenna complexes, including distinct pigment types and organizational principles. The PSI core antenna, being the main functional unit of the supercomplexes, provides an increased functional connectivity in the chlorophyll antenna network due to dense pigment packing resulting in a fast spread of the excitation among the neighbors. Functional connectivity within the network as well as the spectral overlap of antenna pigments allows equilibration of the excitation energy in the depth of the whole membrane within picoseconds and loss-free delivery of the excitation to primary donor P700 within 20-40 ps. Low-light-adapted cyanobacteria under iron-deficiency conditions extend this capacity via assembly of efficiently energy coupled rings of CP43-like complexes around the PSI trimers. In green algae and higher plants, less efficient energy coupling in the eukaryotic PSI-LHCI supercomplexes is probably a result of the structural adaptation of the Chl a/b binding LHCI peripheral antenna that not only extends the absorption cross section of the PSI core but participates in regulation of excitation flows between the two photosystems as well as in photoprotection.
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Affiliation(s)
- Alexander N Melkozernov
- Department of Chemistry and Biochemistry and Center for the Study of Early Events in Photosynthesis, Arizona State University, Tempe, Arizona 85287-1604, USA.
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Melkozernov AN, Kargul J, Lin S, Barber J, Blankenship RE. Spectral and kinetic analysis of the energy coupling in the PS I-LHC I supercomplex from the green alga Chlamydomonas reinhardtii at 77 K. PHOTOSYNTHESIS RESEARCH 2005; 86:203-15. [PMID: 16172939 DOI: 10.1007/s11120-005-4118-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2004] [Accepted: 03/18/2005] [Indexed: 05/04/2023]
Abstract
Energy transfer processes in the chlorophyll antenna of the PS I-LHCI supercomplexes from the green alga Chlamydomonas reinhardtii have been studied at 77 K using transient absorption spectroscopy with multicolor excitation in the 640-670 nm region. Comparison of the kinetic data obtained at low and room temperatures indicates that the slow approximately approximately 100 ps excitation equilibration phase that is characteristic of energy coupling of the LHCI peripheral antenna to the PS I core at physiological temperatures (Melkozernov AN, Kargul J, Lin S, Barber J and Blankenship RE (2004) J Phys Chem B 108: 10547-10555) is not observed in the excitation dynamics of the PS I-LHCI supercomplex at 77 K. This suggests that at low temperatures the peripheral antenna is energetically uncoupled from the PS I core antenna. Under these conditions the observed kinetic phases on the time scales from subpicoseconds to tens of picoseconds represent the superposition of the processes occurring independently in the PS I core antenna and the Chl a/b containing LHCI antenna. In the PS I-LHCI supercomplex with two uncoupled antennas the excitation is channeled to the excitation sinks formed at low temperature by clusters of red pigments. A better spectral resolution of the transient absorption spectra at 77 K results in detection of two DeltaA bands originating from the rise of photobleaching on the picosecond time scale of two clearly distinguished pools of low energy absorbing Chls in the PS I-LHCI supercomplex. The first pool of low energy pigments absorbing at 687 nm is likely to originate from the red pigments in the LHCI where the Lhca1 protein is most abundant. The second pool at 697 nm is suggested to result either from the structural interaction of the LHCI and the PS I core or from other Lhca proteins in the antenna. The kinetic data are discussed based on recent structural models of the PS I-LHCI. It is proposed that the uncoupling of pigment pools may be a control mechanism that regulates energy flow in Photosystem I.
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Affiliation(s)
- Alexander N Melkozernov
- Department of Chemistry and Biochemistry, Center for the Study of Early Events in Photosynthesis, Tempe, AZ 85287-1604, USA.
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